AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1146830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1146830 MtrunA17_Chr7g0233571 61.421 197 17 2 1 138 25 221 9.10e-74 229
Msa1146830 MtrunA17_Chr3g0131891 50.397 252 71 6 1 201 34 282 4.07e-67 216
Msa1146830 MtrunA17_Chr7g0233521 51.316 228 62 5 1 186 1 221 8.41e-67 213
Msa1146830 MtrunA17_Chr7g0233541 48.035 229 61 3 1 172 1 228 1.08e-62 203
Msa1146830 MtrunA17_Chr7g0233561 48.018 227 61 3 2 172 34 259 9.77e-61 199
Msa1146830 MtrunA17_Chr7g0233531 48.357 213 68 3 1 172 1 212 7.12e-60 195
Msa1146830 MtrunA17_Chr7g0232921 48.649 148 73 2 184 330 56 201 3.28e-43 149
Msa1146830 MtrunA17_Chr4g0023021 57.143 105 45 0 294 398 3 107 2.67e-41 142
Msa1146830 MtrunA17_Chr8g0366201 60.000 105 41 1 294 398 1 104 1.62e-40 139
Msa1146830 MtrunA17_Chr6g0473661 34.722 216 124 4 176 374 247 462 7.13e-29 117
Msa1146830 MtrunA17_Chr8g0365871 59.259 81 33 0 294 374 12 92 8.58e-29 108
Msa1146830 MtrunA17_Chr1g0163071 52.874 87 41 0 1 87 1 87 1.69e-26 108
Msa1146830 MtrunA17_Chr8g0390841 28.870 239 97 5 2 172 55 288 1.07e-25 108
Msa1146830 MtrunA17_Chr1g0208771 29.536 237 93 7 2 169 13 244 3.19e-25 106
Msa1146830 MtrunA17_Chr3g0103191 30.493 223 98 5 1 167 25 246 3.49e-23 97.4
Msa1146830 MtrunA17_Chr5g0419201 46.000 100 51 1 1 97 31 130 1.49e-22 94.4
Msa1146830 MtrunA17_Chr1g0173661 48.718 78 40 0 315 392 2 79 2.04e-22 90.9
Msa1146830 MtrunA17_Chr3g0103151 50.602 83 41 0 2 84 26 108 2.02e-21 90.1
Msa1146830 MtrunA17_Chr3g0103181 30.189 212 90 5 2 161 26 231 2.86e-21 92.8
Msa1146830 MtrunA17_Chr3g0103171 47.619 84 44 0 1 84 5 88 6.32e-20 88.6
Msa1146830 MtrunA17_Chr6g0473651 31.333 150 82 3 232 374 42 177 1.78e-19 89.4
Msa1146830 MtrunA17_Chr4g0033961 44.898 98 52 1 2 97 22 119 1.30e-18 87.0
Msa1146830 MtrunA17_Chr3g0077411 31.757 148 93 2 2 149 41 180 2.47e-18 86.7
Msa1146830 MtrunA17_Chr3g0077411 28.302 212 117 8 2 190 278 477 2.85e-14 74.3
Msa1146830 MtrunA17_Chr1g0163241 42.157 102 56 2 2 102 23 122 7.10e-18 80.5
Msa1146830 MtrunA17_Chr1g0163251 50.602 83 39 1 2 84 21 101 7.50e-18 84.7
Msa1146830 MtrunA17_Chr3g0077461 29.762 168 99 4 2 169 23 171 1.97e-17 84.0
Msa1146830 MtrunA17_Chr3g0077461 30.114 176 97 6 2 166 253 413 2.07e-15 77.8
Msa1146830 MtrunA17_Chr1g0162441 45.783 83 45 0 2 84 23 105 2.51e-17 83.2
Msa1146830 MtrunA17_Chr4g0042631 38.710 124 38 2 178 300 60 146 6.51e-17 77.8
Msa1146830 MtrunA17_Chr1g0163191 45.783 83 43 1 2 84 21 101 1.79e-16 76.3
Msa1146830 MtrunA17_Chr1g0163181 48.193 83 41 1 2 84 21 101 2.38e-16 80.5
Msa1146830 MtrunA17_Chr3g0077451 27.807 187 114 5 2 177 12 188 3.59e-16 77.4
Msa1146830 MtrunA17_Chr6g0473921 34.343 99 64 1 277 374 3 101 3.86e-16 75.1
Msa1146830 MtrunA17_Chr5g0429931 38.372 86 53 0 2 87 11 96 4.24e-16 77.4
Msa1146830 MtrunA17_Chr1g0171611 31.792 173 90 5 2 149 25 194 8.48e-16 77.4
Msa1146830 MtrunA17_Chr1g0163201 45.783 83 43 1 2 84 19 99 8.82e-16 78.6
Msa1146830 MtrunA17_Chr1g0163121 43.617 94 50 2 1 94 10 100 1.58e-15 73.2
Msa1146830 MtrunA17_Chr3g0077381 38.372 86 53 0 2 87 36 121 7.75e-15 75.9
Msa1146830 MtrunA17_Chr3g0077381 39.535 86 52 0 2 87 263 348 5.41e-12 67.0
Msa1146830 MtrunA17_Chr6g0467351 40.449 89 52 1 2 89 31 119 1.16e-14 72.8
Msa1146830 MtrunA17_Chr1g0163231 30.319 188 85 6 2 149 25 206 2.25e-14 73.2
Msa1146830 MtrunA17_Chr4g0009491 37.209 86 54 0 2 87 13 98 2.46e-14 74.3
Msa1146830 MtrunA17_Chr4g0009491 40.698 86 51 0 2 87 241 326 4.76e-13 70.5
Msa1146830 MtrunA17_Chr1g0156191 31.884 138 75 3 235 369 8 129 3.70e-14 69.3
Msa1146830 MtrunA17_Chr1g0163101 40.206 97 55 2 1 97 32 125 5.38e-14 70.1
Msa1146830 MtrunA17_Chr1g0163141 44.318 88 46 2 1 88 10 94 1.68e-13 68.6
Msa1146830 MtrunA17_Chr1g0162411 44.304 79 44 0 2 80 23 101 2.09e-13 71.6
Msa1146830 MtrunA17_Chr4g0054611 45.000 60 32 1 328 387 1 59 5.89e-13 64.3
Msa1146830 MtrunA17_Chr1g0162161 42.857 84 45 2 1 84 3 83 7.38e-13 66.2
Msa1146830 MtrunA17_Chr1g0154161 24.658 219 116 4 2 174 46 261 9.09e-13 68.9
Msa1146830 MtrunA17_Chr1g0154211 44.000 75 42 0 2 76 38 112 1.36e-12 68.9
Msa1146830 MtrunA17_Chr1g0163261 28.571 196 92 5 2 152 25 217 1.95e-12 67.4
Msa1146830 MtrunA17_Chr1g0154131 41.772 79 46 0 2 80 198 276 2.94e-12 68.2
Msa1146830 MtrunA17_Chr1g0154131 25.210 238 139 5 2 234 41 244 5.21e-11 64.3
Msa1146830 MtrunA17_Chr1g0154171 42.105 76 44 0 2 77 38 113 3.00e-12 67.4
Msa1146830 MtrunA17_Chr1g0154251 41.333 75 44 0 2 76 42 116 4.25e-12 67.8
Msa1146830 MtrunA17_Chr1g0163131 44.706 85 44 2 1 85 33 114 4.37e-12 66.6
Msa1146830 MtrunA17_Chr1g0154101 38.667 75 46 0 2 76 198 272 4.45e-12 67.8
Msa1146830 MtrunA17_Chr1g0154101 34.307 137 78 3 2 138 41 165 4.53e-12 67.8
Msa1146830 MtrunA17_Chr4g0067431 37.234 94 58 1 2 94 31 124 4.54e-12 66.6
Msa1146830 MtrunA17_Chr1g0163081 39.175 97 56 2 1 97 5 98 4.92e-12 63.5
Msa1146830 MtrunA17_Chr1g0154071 39.241 79 48 0 2 80 171 249 6.21e-12 67.0
Msa1146830 MtrunA17_Chr1g0154071 36.709 79 50 0 2 80 43 121 3.23e-11 64.7
Msa1146830 MtrunA17_Chr1g0163221 37.647 85 52 1 2 85 27 111 9.06e-12 65.9
Msa1146830 MtrunA17_Chr6g0462511 31.000 100 67 2 277 374 13 112 1.97e-11 60.8
Msa1146830 MtrunA17_Chr1g0154191 40.000 75 45 0 2 76 38 112 3.57e-11 64.3
Msa1146830 MtrunA17_Chr1g0154041 36.047 86 55 0 2 87 31 116 4.53e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1146830 AT3G18990.1 49.398 83 42 0 2 84 22 104 6.28e-19 87.4
Msa1146830 AT3G18990.2 49.398 83 42 0 2 84 22 104 8.70e-19 87.4
Msa1146830 AT1G49475.1 43.011 93 52 1 2 94 50 141 1.30e-18 83.6
Msa1146830 AT3G18960.3 44.318 88 49 0 2 89 9 96 4.10e-18 81.6
Msa1146830 AT3G18960.2 44.318 88 49 0 2 89 46 133 4.38e-18 82.4
Msa1146830 AT3G18960.1 44.318 88 49 0 2 89 46 133 5.06e-18 82.4
Msa1146830 AT4G01580.1 43.182 88 50 0 2 89 46 133 1.49e-17 80.5
Msa1146830 AT4G33280.2 41.975 81 46 1 1 80 38 118 3.58e-11 63.9
Msa1146830 AT4G33280.3 41.975 81 46 1 1 80 38 118 7.05e-11 63.9

Find 84 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAAGATGTGCACTTCAAAA+TGG 0.226194 7_4:-24880833 None:intergenic
ATTCATCTAAGGTTGTTAAA+TGG 0.235707 7_4:+24882174 Msa1146830:CDS
ACGTCTGATGATGTTTCTTC+TGG 0.251221 7_4:+24885642 Msa1146830:CDS
TATTTCTCCACAAACTTTCT+TGG 0.252264 7_4:-24880636 None:intergenic
TTTGGTAAAAGACACTTATT+AGG 0.278617 7_4:+24882129 Msa1146830:CDS
AGAAAGTCCTTTGTTAGATA+TGG 0.292309 7_4:+24885564 Msa1146830:CDS
AGAAAGTTTGTGGAGAAATA+TGG 0.293086 7_4:+24880639 Msa1146830:CDS
AAAAGACACTTATTAGGTTT+AGG 0.305070 7_4:+24882135 Msa1146830:CDS
GGTTGTTAAATGGGAGAGTT+TGG 0.328735 7_4:+24882184 Msa1146830:CDS
CGTGTATTCAGAAGCTGAAT+TGG 0.340799 7_4:+24885750 Msa1146830:intron
GAATCTCTTTGGAGATGAAT+TGG 0.348774 7_4:+24885479 Msa1146830:CDS
TTTATCTCAAGGCCATCTTC+TGG 0.349266 7_4:+24880788 Msa1146830:CDS
TTCCTAATTAGATACCTTGC+AGG 0.351726 7_4:-24882207 None:intergenic
ATTGAAGTCAGGAATCTCTT+TGG 0.352639 7_4:+24885468 Msa1146830:intron
CAGAACATACCAAGTGAGTT+TGG 0.360251 7_4:+24882111 Msa1146830:intron
AAGATCGTTGAATACCCTTT+TGG 0.367722 7_4:-24880901 None:intergenic
CTGTGTTAAAGTCAGGAAAT+TGG 0.372609 7_4:+24881036 Msa1146830:intron
TGGAAATTGATGATGGAGTT+TGG 0.386523 7_4:+24885845 Msa1146830:CDS
TCGATTATCTTGGTTATCCT+TGG 0.388792 7_4:+24885825 Msa1146830:CDS
ATTTCTCCACAAACTTTCTT+GGG 0.389419 7_4:-24880635 None:intergenic
TCTGCTAATGCCGGTGAAAA+TGG 0.390301 7_4:+24886040 Msa1146830:CDS
TTCATCTAAGGTTGTTAAAT+GGG 0.393448 7_4:+24882175 Msa1146830:CDS
AGCAAGGAGATATTCATCTA+AGG 0.403603 7_4:+24882163 Msa1146830:CDS
CACAGAATCCACCAACAATA+AGG 0.408379 7_4:+24885964 Msa1146830:CDS
GTTGTCTCGGTTGGCTCGGC+AGG 0.409653 7_4:-24885797 None:intergenic
TGCAAAGTGGAGATTAGATT+TGG 0.413094 7_4:+24880704 Msa1146830:CDS
CATTGATGCTGCTTGTAATC+TGG 0.414628 7_4:+24881403 Msa1146830:CDS
TGGACGCATGACAGCAATAA+AGG 0.428279 7_4:-24881375 None:intergenic
TCCAAAGAGTTGAAGCCAAA+AGG 0.428396 7_4:+24880886 Msa1146830:CDS
ACAACTCTCATCGATTATCT+TGG 0.429131 7_4:+24885815 Msa1146830:CDS
TGTGTGCGTTGCGCGTCTCC+TGG 0.437161 7_4:+24885913 Msa1146830:CDS
AAATATGGTTTCAAAAGGGT+TGG 0.440218 7_4:+24880742 Msa1146830:CDS
GAAGGATCAAGTGTCAAGTT+TGG 0.441700 7_4:+24885938 Msa1146830:CDS
GTTGCGCGTCTCCTGGTTGA+AGG 0.443911 7_4:+24885920 Msa1146830:CDS
GATGATCCCAAGAAAGTTTG+TGG 0.445895 7_4:+24880629 None:intergenic
CAGGTATATAACCTTATTGT+TGG 0.448275 7_4:-24885975 None:intergenic
CCAAAGAGTTGAAGCCAAAA+GGG 0.465061 7_4:+24880887 Msa1146830:CDS
TGATCACGCAGCATGACATA+TGG 0.478460 7_4:-24885300 None:intergenic
GTATATAACCTTATTGTTGG+TGG 0.479718 7_4:-24885972 None:intergenic
TGGCTTCAACTCTTTGGAAA+GGG 0.481840 7_4:-24880881 None:intergenic
TGATGTTTCTTCTGGAGTGT+TGG 0.483966 7_4:+24885650 Msa1146830:CDS
GAAGATGTGCACTTCAAAAT+GGG 0.484263 7_4:-24880832 None:intergenic
AATCTCCACTTTGCACCACT+TGG 0.487838 7_4:-24880696 None:intergenic
CATATTTGAAAACCAGAAGA+TGG 0.494768 7_4:-24880800 None:intergenic
TTTGATATTTATGCAGCGTA+AGG 0.497615 7_4:+24885230 Msa1146830:CDS
AAAGGACTTTCTATAGTCCT+TGG 0.503314 7_4:-24885553 None:intergenic
CATAGAGTTTGCTCGGTCAA+AGG 0.509155 7_4:-24881336 None:intergenic
TTATCCTTGGAAATTGATGA+TGG 0.511778 7_4:+24885838 Msa1146830:CDS
TTGGCTTCAACTCTTTGGAA+AGG 0.513756 7_4:-24880882 None:intergenic
AAGTTCTCATAGAGTTTGCT+CGG 0.514060 7_4:-24881343 None:intergenic
TAAAGTCAGGAAATTGGAAA+AGG 0.514523 7_4:+24881042 Msa1146830:intron
GAGAGTTGTCTCGGTTGGCT+CGG 0.516327 7_4:-24885801 None:intergenic
ATTAGCAGATGGTGGTAACC+TGG 0.516983 7_4:-24886026 None:intergenic
CAAGCAGCATCAATGTATGA+TGG 0.531742 7_4:-24881395 None:intergenic
ATGGGAGAGTTTGGCCTGCA+AGG 0.535413 7_4:+24882193 Msa1146830:CDS
TCCTTCCCTCAAAATGATGT+TGG 0.535803 7_4:+24885518 Msa1146830:CDS
ATTCAGAAGCTGAATTGGCT+AGG 0.537682 7_4:+24885755 Msa1146830:intron
AAGTATCATTCTTTATCTCA+AGG 0.553311 7_4:+24880777 Msa1146830:CDS
CCTGTGTCCACCTCAGATGT+TGG 0.555458 7_4:+24885994 Msa1146830:CDS
AGATGTTGGTCTTGAAGACC+AGG 0.559801 7_4:+24886008 Msa1146830:CDS
CGCATGACAGCAATAAAGGA+TGG 0.564569 7_4:-24881371 None:intergenic
AAACATCTTGCAAAGCAAGC+AGG 0.574363 7_4:-24885261 None:intergenic
TTTGTGGAGAAATATGGAGA+AGG 0.578281 7_4:+24880645 Msa1146830:CDS
AACTCCATCATCAATTTCCA+AGG 0.581772 7_4:-24885842 None:intergenic
ATGATGGAGTTTGGTCGCGA+TGG 0.582776 7_4:+24885854 Msa1146830:CDS
TCGATGAGAGTTGTCTCGGT+TGG 0.589719 7_4:-24885806 None:intergenic
ATAATCGATGAGAGTTGTCT+CGG 0.592081 7_4:-24885810 None:intergenic
TTACCACCATCTGCTAATGC+CGG 0.595500 7_4:+24886031 Msa1146830:CDS
TCATAACTACAATGAGATTG+AGG 0.597900 7_4:+24885320 Msa1146830:CDS
GTCTTCAAGACCAACATCTG+AGG 0.601285 7_4:-24886004 None:intergenic
TATTTATGCAGCGTAAGGGA+AGG 0.602255 7_4:+24885235 Msa1146830:CDS
TTGATATTTATGCAGCGTAA+GGG 0.610901 7_4:+24885231 Msa1146830:CDS
TCACCGGCATTAGCAGATGG+TGG 0.614742 7_4:-24886034 None:intergenic
TTCAAGACCAACATCTGAGG+TGG 0.617035 7_4:-24886001 None:intergenic
ATTCAAACCATATCTAACAA+AGG 0.624964 7_4:-24885571 None:intergenic
AGACTCCAAGTGGTGCAAAG+TGG 0.629081 7_4:+24880691 Msa1146830:CDS
GTTGGAGACTCAAAGTGCCA+AGG 0.648038 7_4:+24885536 Msa1146830:CDS
ATTGTGTGACAGAAAACAGT+GGG 0.648413 7_4:-24885606 None:intergenic
TGTGACAGAAAACAGTGGGA+AGG 0.652796 7_4:-24885602 None:intergenic
TTGAGGGAAGGATTCAGGCG+AGG 0.655710 7_4:-24885507 None:intergenic
ATATATCTAAAGACTCCAAG+TGG 0.664356 7_4:+24880681 Msa1146830:CDS
CCAACATCTGAGGTGGACAC+AGG 0.671650 7_4:-24885994 None:intergenic
TGACACTTGATCCTTCAACC+AGG 0.679876 7_4:-24885931 None:intergenic
CATTGTGTGACAGAAAACAG+TGG 0.727787 7_4:-24885607 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTAATCCTTTTTATTT+TGG + chr7_4:24881800-24881819 Msa1146830:intron 10.0%
!!! TTTTTAATCCTTTTTATTTT+GGG + chr7_4:24881801-24881820 Msa1146830:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr7_4:24883680-24883699 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr7_4:24883681-24883700 None:intergenic 10.0%
!! TAATAGATCAATGAAAATTA+TGG + chr7_4:24881255-24881274 Msa1146830:intron 15.0%
!!! TATTTTTAGTTCAATATGTT+TGG + chr7_4:24881681-24881700 Msa1146830:intron 15.0%
!! ATAAATAAATTTGACACATT+AGG - chr7_4:24882463-24882482 None:intergenic 15.0%
!! TATAAAAGAAATAGAAACAT+CGG - chr7_4:24882802-24882821 None:intergenic 15.0%
!! CTTTAATTCTTTATTGAAAT+TGG + chr7_4:24883283-24883302 Msa1146830:intron 15.0%
!! CAAAACAAAATAACTATTTA+GGG - chr7_4:24883436-24883455 None:intergenic 15.0%
!! AATTAGAGTTATATTGTATT+AGG - chr7_4:24883615-24883634 None:intergenic 15.0%
!! AAAGTGAAATATATTGAATT+GGG - chr7_4:24883656-24883675 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr7_4:24883679-24883698 None:intergenic 15.0%
!! ATTTATATAGAAAGAAGAAA+TGG - chr7_4:24884567-24884586 None:intergenic 15.0%
!! ATGAAGAATAATAAAAGAAT+AGG + chr7_4:24885041-24885060 Msa1146830:intron 15.0%
!!! TAAAAAGTGATGGAAAAATA+TGG + chr7_4:24880727-24880746 Msa1146830:CDS 20.0%
!!! AATATTGACAAAAAGTGTAA+AGG + chr7_4:24881079-24881098 Msa1146830:intron 20.0%
!! ATTTACTTTCACTTTATGAT+TGG + chr7_4:24881182-24881201 Msa1146830:intron 20.0%
!! ATTGGTTAAGTTTCATATTA+TGG + chr7_4:24881200-24881219 Msa1146830:intron 20.0%
!!! AAGGTCATAACTTTTTTTAA+TGG + chr7_4:24881452-24881471 Msa1146830:intron 20.0%
!!! TAACTTTTTTTAATGGATGA+AGG + chr7_4:24881459-24881478 Msa1146830:intron 20.0%
!!! AATTTGGTAATTTGTTATAG+TGG - chr7_4:24881633-24881652 None:intergenic 20.0%
!! TTTGATCAGAGATATTTATA+GGG - chr7_4:24881708-24881727 None:intergenic 20.0%
!!! TTTTGATCAGAGATATTTAT+AGG - chr7_4:24881709-24881728 None:intergenic 20.0%
!!! TTAGTCCAAACAATTTTATA+TGG + chr7_4:24881730-24881749 Msa1146830:intron 20.0%
!! TAAGTCCATATAAAATTGTT+TGG - chr7_4:24881738-24881757 None:intergenic 20.0%
!! TTTATAGACCCAAAATAAAA+AGG - chr7_4:24881812-24881831 None:intergenic 20.0%
!! GGTCTATAAATAATGAAAAA+TGG + chr7_4:24881822-24881841 Msa1146830:intron 20.0%
!!! GCTAATCTTTATTGATAATT+TGG + chr7_4:24881883-24881902 Msa1146830:intron 20.0%
!!! AGTTTTTTGAAATACATTGT+CGG - chr7_4:24882027-24882046 None:intergenic 20.0%
!!! AAATTTGAAATATACTCAAC+TGG + chr7_4:24882249-24882268 Msa1146830:intron 20.0%
!!! AAGTTATTTTGGAATATAGA+AGG + chr7_4:24882516-24882535 Msa1146830:intron 20.0%
!! CTAGTAATAATCTAATCATT+TGG - chr7_4:24882652-24882671 None:intergenic 20.0%
!! AATAATATCTGATACTACAA+AGG - chr7_4:24882937-24882956 None:intergenic 20.0%
!! TAGTATCAGATATTATTATC+AGG + chr7_4:24882940-24882959 Msa1146830:intron 20.0%
!! TTATTTGCAAATAGAAAGAA+AGG - chr7_4:24883079-24883098 None:intergenic 20.0%
!!! AATGTATATAGTATGTTTTC+TGG - chr7_4:24883230-24883249 None:intergenic 20.0%
!! TTGATAAAAATCAAACAAAC+TGG - chr7_4:24883253-24883272 None:intergenic 20.0%
!! TTTATATTATTCTTCTGTTC+TGG - chr7_4:24883344-24883363 None:intergenic 20.0%
!! GCAAAACAAAATAACTATTT+AGG - chr7_4:24883437-24883456 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - chr7_4:24883583-24883602 None:intergenic 20.0%
!! GAAAGTGAAATATATTGAAT+TGG - chr7_4:24883657-24883676 None:intergenic 20.0%
!!! ACTTTATTTCATACTTGAAA+AGG + chr7_4:24883986-24884005 Msa1146830:intron 20.0%
!! AAGCAGTAAAACATTAAAAA+AGG + chr7_4:24884028-24884047 Msa1146830:intron 20.0%
!!! AAACATTAAAAAAGGTTTTG+AGG + chr7_4:24884036-24884055 Msa1146830:intron 20.0%
!!! AACATTAAAAAAGGTTTTGA+GGG + chr7_4:24884037-24884056 Msa1146830:intron 20.0%
!!! AAATTTTCCATTGTTTACTT+TGG - chr7_4:24884644-24884663 None:intergenic 20.0%
!!! AAGTAAACAATGGAAAATTT+TGG + chr7_4:24884644-24884663 Msa1146830:intron 20.0%
!!! AGTAAACAATGGAAAATTTT+GGG + chr7_4:24884645-24884664 Msa1146830:intron 20.0%
!! TTCAACAAATAAAGTTCTTA+AGG - chr7_4:24884734-24884753 None:intergenic 20.0%
!! AATAATAAAAGAATAGGTCT+GGG + chr7_4:24885047-24885066 Msa1146830:intron 20.0%
!!! TCATTTTTGAAGAACTTTTA+TGG + chr7_4:24885390-24885409 Msa1146830:intron 20.0%
!! TTAGATTTGGTAAAAAGTGA+TGG + chr7_4:24880717-24880736 Msa1146830:CDS 25.0%
! TGGAAAAATATGGTTTCAAA+AGG + chr7_4:24880737-24880756 Msa1146830:CDS 25.0%
! GGAAAAATATGGTTTCAAAA+GGG + chr7_4:24880738-24880757 Msa1146830:CDS 25.0%
! AAGTATCATTCTTTATCTCA+AGG + chr7_4:24880777-24880796 Msa1146830:CDS 25.0%
!! TTCCAAATCTTCATCATTTT+CGG - chr7_4:24880939-24880958 None:intergenic 25.0%
! TTTAATCAACCTTGTGAAAT+TGG + chr7_4:24881004-24881023 Msa1146830:intron 25.0%
! GAATGAAAAGCTAATAACTT+AGG - chr7_4:24881159-24881178 None:intergenic 25.0%
! ATCAATGAAAATTATGGCTT+AGG + chr7_4:24881261-24881280 Msa1146830:intron 25.0%
! TCAATGAAAATTATGGCTTA+GGG + chr7_4:24881262-24881281 Msa1146830:intron 25.0%
!!! TTGTTATAGTGGTTTTTCAA+GGG - chr7_4:24881622-24881641 None:intergenic 25.0%
!!! TTTGTTATAGTGGTTTTTCA+AGG - chr7_4:24881623-24881642 None:intergenic 25.0%
!! CAAATTTTACCCATTAAGTA+GGG + chr7_4:24881647-24881666 Msa1146830:intron 25.0%
! AAACAAATGATCTTGAGTAT+CGG - chr7_4:24882076-24882095 None:intergenic 25.0%
! TTTGGTAAAAGACACTTATT+AGG + chr7_4:24882129-24882148 Msa1146830:CDS 25.0%
! AAAAGACACTTATTAGGTTT+AGG + chr7_4:24882135-24882154 Msa1146830:CDS 25.0%
!! ATTCATCTAAGGTTGTTAAA+TGG + chr7_4:24882174-24882193 Msa1146830:CDS 25.0%
!! TTCATCTAAGGTTGTTAAAT+GGG + chr7_4:24882175-24882194 Msa1146830:CDS 25.0%
! TGTATTTGTCCAATATTTCA+AGG + chr7_4:24882401-24882420 Msa1146830:intron 25.0%
! ATGATCATACCTTGAAATAT+TGG - chr7_4:24882413-24882432 None:intergenic 25.0%
!!! AGAACATTTTTGAAACTCTT+TGG - chr7_4:24882581-24882600 None:intergenic 25.0%
! CTAGTCTAATAACTAAGAAT+TGG + chr7_4:24882668-24882687 Msa1146830:intron 25.0%
!!! ACAACTATTTTGCTTTTCTT+TGG + chr7_4:24882695-24882714 Msa1146830:intron 25.0%
! AGAAAAACAACAAAGTTTGT+AGG - chr7_4:24882757-24882776 None:intergenic 25.0%
! CTTTGTTAAAGTTGTTTAGA+AGG - chr7_4:24883002-24883021 None:intergenic 25.0%
! AGAATATATACCTATTTGAC+TGG - chr7_4:24883109-24883128 None:intergenic 25.0%
! TCTGGAAAAATTATTCAAAC+AGG - chr7_4:24883212-24883231 None:intergenic 25.0%
!!! GGACACTTTTTTTAGTAAAT+GGG - chr7_4:24883547-24883566 None:intergenic 25.0%
!! TGAAATGGCTCAATTATTTT+GGG - chr7_4:24883568-24883587 None:intergenic 25.0%
!! TTGAAATGGCTCAATTATTT+TGG - chr7_4:24883569-24883588 None:intergenic 25.0%
! ATATATTGAATTGGGAATGA+TGG - chr7_4:24883648-24883667 None:intergenic 25.0%
!!! CGAATTGATTTGATTGATTT+AGG + chr7_4:24883865-24883884 Msa1146830:intron 25.0%
! TGTAAACTGAAACAACTTAA+AGG + chr7_4:24884065-24884084 Msa1146830:intron 25.0%
! TATAGGTTCAATGACAAATT+AGG - chr7_4:24884128-24884147 None:intergenic 25.0%
! CATTGAACCTATAAACATAA+TGG + chr7_4:24884135-24884154 Msa1146830:intron 25.0%
!! TGGTTTTCCATTATGTTTAT+AGG - chr7_4:24884145-24884164 None:intergenic 25.0%
!!! TTTTAAGATGATTGTGAATG+TGG - chr7_4:24884165-24884184 None:intergenic 25.0%
! AAATGCTCATTAGTTAATTG+AGG - chr7_4:24884486-24884505 None:intergenic 25.0%
! ATAGCTTCACAATTACAAAT+AGG - chr7_4:24884799-24884818 None:intergenic 25.0%
! GAATAATAAAAGAATAGGTC+TGG + chr7_4:24885046-24885065 Msa1146830:intron 25.0%
! AATCATAGTTTCTTATCTGT+TGG + chr7_4:24885098-24885117 Msa1146830:intron 25.0%
! TAAAGACTTTAACATCTCTT+TGG + chr7_4:24885147-24885166 Msa1146830:intron 25.0%
!! CATGATTTTTCTTTAAACCA+TGG + chr7_4:24885186-24885205 Msa1146830:intron 25.0%
! ATTCAAACCATATCTAACAA+AGG - chr7_4:24885574-24885593 None:intergenic 25.0%
ATTTCTCCACAAACTTTCTT+GGG - chr7_4:24880638-24880657 None:intergenic 30.0%
TATTTCTCCACAAACTTTCT+TGG - chr7_4:24880639-24880658 None:intergenic 30.0%
AGAAAGTTTGTGGAGAAATA+TGG + chr7_4:24880639-24880658 Msa1146830:CDS 30.0%
ATATATCTAAAGACTCCAAG+TGG + chr7_4:24880681-24880700 Msa1146830:CDS 30.0%
AAATATGGTTTCAAAAGGGT+TGG + chr7_4:24880742-24880761 Msa1146830:CDS 30.0%
CATATTTGAAAACCAGAAGA+TGG - chr7_4:24880803-24880822 None:intergenic 30.0%
!!! CATCTTCTGGTTTTCAAATA+TGG + chr7_4:24880801-24880820 Msa1146830:CDS 30.0%
!!! GAAAGGGTATTTTATCTCTA+AGG - chr7_4:24880868-24880887 None:intergenic 30.0%
TAAAGTCAGGAAATTGGAAA+AGG + chr7_4:24881042-24881061 Msa1146830:intron 30.0%
! CAAACAAAGGTTTTGCTTAA+AGG + chr7_4:24881433-24881452 Msa1146830:intron 30.0%
!!! CTTTTTTTGTGTTAATCCTC+TGG + chr7_4:24881487-24881506 Msa1146830:intron 30.0%
!! ATTTTGGGTGGAACAATTTT+TGG - chr7_4:24881572-24881591 None:intergenic 30.0%
! CCTACTTAATGGGTAAAATT+TGG - chr7_4:24881649-24881668 None:intergenic 30.0%
! CCAAATTTTACCCATTAAGT+AGG + chr7_4:24881646-24881665 Msa1146830:intron 30.0%
! GTGGTATTTTGTAAAGAGTA+AGG + chr7_4:24881768-24881787 Msa1146830:intron 30.0%
! AATGTTTTACACTGTCAACA+AGG + chr7_4:24881943-24881962 Msa1146830:intron 30.0%
!! AGTATCGGTAAATACATTGT+CGG - chr7_4:24882061-24882080 None:intergenic 30.0%
TTAGGTTTAGGAAAAAAGCA+AGG + chr7_4:24882147-24882166 Msa1146830:CDS 30.0%
ATTAGGAAAGGCAATACAAA+AGG + chr7_4:24882222-24882241 Msa1146830:intron 30.0%
TTGAAATATACTCAACTGGA+TGG + chr7_4:24882253-24882272 Msa1146830:intron 30.0%
CATAAAGATGTGAACAATGA+AGG - chr7_4:24882358-24882377 None:intergenic 30.0%
CTTCATTGTTCACATCTTTA+TGG + chr7_4:24882356-24882375 Msa1146830:intron 30.0%
AAGAAAGGACATTTCTTGAA+GGG - chr7_4:24883064-24883083 None:intergenic 30.0%
AAAGAAAGGACATTTCTTGA+AGG - chr7_4:24883065-24883084 None:intergenic 30.0%
!!! GGGACACTTTTTTTAGTAAA+TGG - chr7_4:24883548-24883567 None:intergenic 30.0%
TTCAAAAAGAGACGGTAAAA+GGG - chr7_4:24883926-24883945 None:intergenic 30.0%
ATTCAAAAAGAGACGGTAAA+AGG - chr7_4:24883927-24883946 None:intergenic 30.0%
! AAACAACTTAAAGGAGTGTA+TGG + chr7_4:24884074-24884093 Msa1146830:intron 30.0%
! AATTGGGAAGAATTTGCTTA+GGG - chr7_4:24884229-24884248 None:intergenic 30.0%
! AAATTGGGAAGAATTTGCTT+AGG - chr7_4:24884230-24884249 None:intergenic 30.0%
!! CACGAGTTTCTAGTTAAATT+GGG - chr7_4:24884245-24884264 None:intergenic 30.0%
!! ACACGAGTTTCTAGTTAAAT+TGG - chr7_4:24884246-24884265 None:intergenic 30.0%
AATTTAACTAGAAACTCGTG+TGG + chr7_4:24884245-24884264 Msa1146830:intron 30.0%
TTTGTCCAATTTAAACCCTA+GGG - chr7_4:24884279-24884298 None:intergenic 30.0%
ATTTGTCCAATTTAAACCCT+AGG - chr7_4:24884280-24884299 None:intergenic 30.0%
! GAAATGTTGTTTATGTGTTG+TGG - chr7_4:24884610-24884629 None:intergenic 30.0%
TCACAATTACAAATAGGTGT+AGG - chr7_4:24884793-24884812 None:intergenic 30.0%
CAACTTTACACACTATCAAA+AGG - chr7_4:24884827-24884846 None:intergenic 30.0%
!! TCTTATCTGTTGGTGTTATT+AGG + chr7_4:24885108-24885127 Msa1146830:intron 30.0%
! ATTTTTCTTTAAACCATGGC+AGG + chr7_4:24885190-24885209 Msa1146830:intron 30.0%
TTTGATATTTATGCAGCGTA+AGG + chr7_4:24885230-24885249 Msa1146830:CDS 30.0%
TTGATATTTATGCAGCGTAA+GGG + chr7_4:24885231-24885250 Msa1146830:CDS 30.0%
!!! AGATGTTTTAGTTTGCAAGT+TGG + chr7_4:24885276-24885295 Msa1146830:CDS 30.0%
TCATAACTACAATGAGATTG+AGG + chr7_4:24885320-24885339 Msa1146830:CDS 30.0%
GTTGCCATTGAAAAAAAGAA+CGG + chr7_4:24885342-24885361 Msa1146830:CDS 30.0%
TTGCCATTGAAAAAAAGAAC+GGG + chr7_4:24885343-24885362 Msa1146830:CDS 30.0%
!!! TTTCCCGTTCTTTTTTTCAA+TGG - chr7_4:24885349-24885368 None:intergenic 30.0%
! AACTTTTATGGCATATTAGC+TGG + chr7_4:24885402-24885421 Msa1146830:intron 30.0%
AGAAAGTCCTTTGTTAGATA+TGG + chr7_4:24885564-24885583 Msa1146830:CDS 30.0%
TTATCCTTGGAAATTGATGA+TGG + chr7_4:24885838-24885857 Msa1146830:CDS 30.0%
! GATATGACATGTCTATTTTC+TGG + chr7_4:24885878-24885897 Msa1146830:CDS 30.0%
GTATATAACCTTATTGTTGG+TGG - chr7_4:24885975-24885994 None:intergenic 30.0%
CAGGTATATAACCTTATTGT+TGG - chr7_4:24885978-24885997 None:intergenic 30.0%
TTTGTGGAGAAATATGGAGA+AGG + chr7_4:24880645-24880664 Msa1146830:CDS 35.0%
TGCAAAGTGGAGATTAGATT+TGG + chr7_4:24880704-24880723 Msa1146830:CDS 35.0%
GAAGATGTGCACTTCAAAAT+GGG - chr7_4:24880835-24880854 None:intergenic 35.0%
! AAGATCGTTGAATACCCTTT+TGG - chr7_4:24880904-24880923 None:intergenic 35.0%
!! AAAAGGGTATTCAACGATCT+TGG + chr7_4:24880903-24880922 Msa1146830:intron 35.0%
CTCCGAAAATGATGAAGATT+TGG + chr7_4:24880934-24880953 Msa1146830:intron 35.0%
CTATTGCTTCCAATTTCACA+AGG - chr7_4:24881016-24881035 None:intergenic 35.0%
CTGTGTTAAAGTCAGGAAAT+TGG + chr7_4:24881036-24881055 Msa1146830:intron 35.0%
! GAATTTTGCAGGAAAGCAAT+TGG + chr7_4:24881292-24881311 Msa1146830:intron 35.0%
! AAGTTCTCATAGAGTTTGCT+CGG - chr7_4:24881346-24881365 None:intergenic 35.0%
CACTATTGACCCTACTTAAT+GGG - chr7_4:24881659-24881678 None:intergenic 35.0%
ACACTATTGACCCTACTTAA+TGG - chr7_4:24881660-24881679 None:intergenic 35.0%
ATGGACTTAACTCAGATTTG+TGG + chr7_4:24881749-24881768 Msa1146830:intron 35.0%
! TGTCTTTTACCAAACTCACT+TGG - chr7_4:24882123-24882142 None:intergenic 35.0%
AGCAAGGAGATATTCATCTA+AGG + chr7_4:24882163-24882182 Msa1146830:CDS 35.0%
TTCCTAATTAGATACCTTGC+AGG - chr7_4:24882210-24882229 None:intergenic 35.0%
! GCAAGGTATCTAATTAGGAA+AGG + chr7_4:24882210-24882229 Msa1146830:intron 35.0%
GAAGACAACAACTTGAAAGT+TGG + chr7_4:24882288-24882307 Msa1146830:intron 35.0%
AAGGTAAGTATAGTGCTAGT+AGG - chr7_4:24882339-24882358 None:intergenic 35.0%
! ACCAAGGAGTGAAGTTATTT+TGG + chr7_4:24882505-24882524 Msa1146830:intron 35.0%
TCCAAAATAACTTCACTCCT+TGG - chr7_4:24882509-24882528 None:intergenic 35.0%
TTGAAACTCTTTGGTTGTGA+TGG - chr7_4:24882572-24882591 None:intergenic 35.0%
AAAGAAAACCAACACAGAGA+AGG + chr7_4:24882828-24882847 Msa1146830:intron 35.0%
TAACTTTGAGCCAGTCAAAT+AGG + chr7_4:24883096-24883115 Msa1146830:intron 35.0%
AGATGCTGAAAATGTCATGT+GGG - chr7_4:24883181-24883200 None:intergenic 35.0%
AAGATGCTGAAAATGTCATG+TGG - chr7_4:24883182-24883201 None:intergenic 35.0%
GAAGTGATTCTTCAATGCTT+TGG - chr7_4:24883369-24883388 None:intergenic 35.0%
ATTTAGGGATGCAATATCGA+TGG - chr7_4:24883421-24883440 None:intergenic 35.0%
AGTAAATGGGTCAGATATTC+CGG - chr7_4:24883534-24883553 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG + chr7_4:24883701-24883720 Msa1146830:intron 35.0%
CTATAATATCTGAGCCAGTT+TGG - chr7_4:24883718-24883737 None:intergenic 35.0%
! CAAACTGGCTCAGATATTAT+AGG + chr7_4:24883716-24883735 Msa1146830:intron 35.0%
!!! AGACTCAGAATTACCGATTT+TGG - chr7_4:24883821-24883840 None:intergenic 35.0%
CCGAGTAATTCAAAAAGAGA+CGG - chr7_4:24883934-24883953 None:intergenic 35.0%
! CCGTCTCTTTTTGAATTACT+CGG + chr7_4:24883931-24883950 Msa1146830:intron 35.0%
GAAAACCCTAGGGTTTAAAT+TGG + chr7_4:24884271-24884290 Msa1146830:intron 35.0%
! AAATTACTTTGCTGTCCTTG+AGG + chr7_4:24884296-24884315 Msa1146830:intron 35.0%
! GTTTCTTTTCACCATACACT+TGG + chr7_4:24884417-24884436 Msa1146830:intron 35.0%
! TTTGAAATGAACGCATGTGA+TGG + chr7_4:24884460-24884479 Msa1146830:intron 35.0%
TGAGCATTTAACCATACACT+TGG + chr7_4:24884497-24884516 Msa1146830:intron 35.0%
AGAAGAAATGGCTATTCTCA+TGG - chr7_4:24884555-24884574 None:intergenic 35.0%
GAACTTAACAATGTATGCCA+AGG + chr7_4:24884667-24884686 Msa1146830:intron 35.0%
! GGTGCTATATGTTTGATGAA+AGG + chr7_4:24884704-24884723 Msa1146830:intron 35.0%
GTGTTTCTTTATCCCATCAA+AGG + chr7_4:24884867-24884886 Msa1146830:intron 35.0%
!! GGTTTGTGTTTGTTGTTCTT+TGG + chr7_4:24884918-24884937 Msa1146830:intron 35.0%
TGTTTGCTTGACATCATGTT+TGG + chr7_4:24885000-24885019 Msa1146830:intron 35.0%
! AAGTCTATTTTGCTGATGGA+TGG + chr7_4:24885367-24885386 Msa1146830:CDS 35.0%
! TTTTATGGCATATTAGCTGG+TGG + chr7_4:24885405-24885424 Msa1146830:intron 35.0%
ATTGAAGTCAGGAATCTCTT+TGG + chr7_4:24885468-24885487 Msa1146830:intron 35.0%
! GAATCTCTTTGGAGATGAAT+TGG + chr7_4:24885479-24885498 Msa1146830:CDS 35.0%
! AGTCTCCAACATCATTTTGA+GGG - chr7_4:24885526-24885545 None:intergenic 35.0%
AAAGGACTTTCTATAGTCCT+TGG - chr7_4:24885556-24885575 None:intergenic 35.0%
ATTGTGTGACAGAAAACAGT+GGG - chr7_4:24885609-24885628 None:intergenic 35.0%
AATTCAGCTTCTGAATACAC+GGG - chr7_4:24885751-24885770 None:intergenic 35.0%
CAATTCAGCTTCTGAATACA+CGG - chr7_4:24885752-24885771 None:intergenic 35.0%
ATAATCGATGAGAGTTGTCT+CGG - chr7_4:24885813-24885832 None:intergenic 35.0%
! ACAACTCTCATCGATTATCT+TGG + chr7_4:24885815-24885834 Msa1146830:CDS 35.0%
TCGATTATCTTGGTTATCCT+TGG + chr7_4:24885825-24885844 Msa1146830:CDS 35.0%
AACTCCATCATCAATTTCCA+AGG - chr7_4:24885845-24885864 None:intergenic 35.0%
!! TGGAAATTGATGATGGAGTT+TGG + chr7_4:24885845-24885864 Msa1146830:CDS 35.0%
TTTATCTCAAGGCCATCTTC+TGG + chr7_4:24880788-24880807 Msa1146830:CDS 40.0%
CGAAGATGTGCACTTCAAAA+TGG - chr7_4:24880836-24880855 None:intergenic 40.0%
! TGGCTTCAACTCTTTGGAAA+GGG - chr7_4:24880884-24880903 None:intergenic 40.0%
! TTGGCTTCAACTCTTTGGAA+AGG - chr7_4:24880885-24880904 None:intergenic 40.0%
TCCAAAGAGTTGAAGCCAAA+AGG + chr7_4:24880886-24880905 Msa1146830:CDS 40.0%
CCAAAGAGTTGAAGCCAAAA+GGG + chr7_4:24880887-24880906 Msa1146830:CDS 40.0%
GCAATAGCTGTGTTAAAGTC+AGG + chr7_4:24881029-24881048 Msa1146830:intron 40.0%
CAAGCAGCATCAATGTATGA+TGG - chr7_4:24881398-24881417 None:intergenic 40.0%
! CATTGATGCTGCTTGTAATC+TGG + chr7_4:24881403-24881422 Msa1146830:CDS 40.0%
ATCTGGTAAGCTGCAAACAA+AGG + chr7_4:24881420-24881439 Msa1146830:intron 40.0%
GGCTGAACTTCAGATTATCA+GGG - chr7_4:24881530-24881549 None:intergenic 40.0%
GGCTAGGTTATACTTCTTCA+CGG - chr7_4:24881551-24881570 None:intergenic 40.0%
!! TTTTCAAGGGCGAATCATTC+AGG - chr7_4:24881609-24881628 None:intergenic 40.0%
CAGAACATACCAAGTGAGTT+TGG + chr7_4:24882111-24882130 Msa1146830:intron 40.0%
GGTTGTTAAATGGGAGAGTT+TGG + chr7_4:24882184-24882203 Msa1146830:CDS 40.0%
TGTGCAGAATCAACATACCA+AGG + chr7_4:24882489-24882508 Msa1146830:intron 40.0%
! CTTTGGTTGTGATGGTGATT+TGG - chr7_4:24882564-24882583 None:intergenic 40.0%
GCTCAAAATCATGCATGAAC+TGG - chr7_4:24882622-24882641 None:intergenic 40.0%
ATTCCATCAAGTGAAGCTCA+GGG - chr7_4:24882728-24882747 None:intergenic 40.0%
! AGTTGTTTAGAAGGTGCAAC+TGG - chr7_4:24882993-24883012 None:intergenic 40.0%
! CTTTCATTTTCAACCCTGTC+AGG + chr7_4:24883144-24883163 Msa1146830:intron 40.0%
GATGCTGAAAATGTCATGTG+GGG - chr7_4:24883180-24883199 None:intergenic 40.0%
GTAAATGGGTCAGATATTCC+GGG - chr7_4:24883533-24883552 None:intergenic 40.0%
CTGGCTCAGATATTATAGGA+CGG + chr7_4:24883720-24883739 Msa1146830:intron 40.0%
CTCAGATATTATAGGACGGA+GGG + chr7_4:24883724-24883743 Msa1146830:intron 40.0%
! GGTAGTGAAAGATAAGTTGG+AGG - chr7_4:24883755-24883774 None:intergenic 40.0%
AGGGGTAGTGAAAGATAAGT+TGG - chr7_4:24883758-24883777 None:intergenic 40.0%
TTATCTTTCACTACCCCTTC+TGG + chr7_4:24883760-24883779 Msa1146830:intron 40.0%
GTGGATATGATTGAAGCAGT+GGG - chr7_4:24883893-24883912 None:intergenic 40.0%
AGTGGATATGATTGAAGCAG+TGG - chr7_4:24883894-24883913 None:intergenic 40.0%
AAAAAGAGACGGTAAAAGGG+TGG - chr7_4:24883923-24883942 None:intergenic 40.0%
TAAAAGAAGAGCAGTTCTGC+AGG + chr7_4:24884188-24884207 Msa1146830:intron 40.0%
TTAACTAGAAACTCGTGTGG+AGG + chr7_4:24884248-24884267 Msa1146830:intron 40.0%
TAACTAGAAACTCGTGTGGA+GGG + chr7_4:24884249-24884268 Msa1146830:intron 40.0%
ACCATCATTACACTAAGCCT+GGG - chr7_4:24884396-24884415 None:intergenic 40.0%
AACCATCATTACACTAAGCC+TGG - chr7_4:24884397-24884416 None:intergenic 40.0%
CAAATCATCAGCCAAGTGTA+TGG - chr7_4:24884511-24884530 None:intergenic 40.0%
! TTATGTGTTGTGGTTTGCGA+AGG - chr7_4:24884600-24884619 None:intergenic 40.0%
TCTGCGACCAAAGTAAACAA+TGG + chr7_4:24884634-24884653 Msa1146830:intron 40.0%
TCTGCATTCACACCTTTGAT+GGG - chr7_4:24884882-24884901 None:intergenic 40.0%
TTCTGCATTCACACCTTTGA+TGG - chr7_4:24884883-24884902 None:intergenic 40.0%
GTGAATGCAGAATCTCAAAC+AGG + chr7_4:24884891-24884910 Msa1146830:intron 40.0%
! AATAGGTCTGGGATACTACA+TGG + chr7_4:24885058-24885077 Msa1146830:intron 40.0%
!! ACATCTCTTTGGAGTAGTCA+TGG + chr7_4:24885158-24885177 Msa1146830:intron 40.0%
!! CATCTCTTTGGAGTAGTCAT+GGG + chr7_4:24885159-24885178 Msa1146830:intron 40.0%
CATGACTTAATTTCCTGCCA+TGG - chr7_4:24885206-24885225 None:intergenic 40.0%
TATTTATGCAGCGTAAGGGA+AGG + chr7_4:24885235-24885254 Msa1146830:CDS 40.0%
AAACATCTTGCAAAGCAAGC+AGG - chr7_4:24885264-24885283 None:intergenic 40.0%
! GGGAAAGTCTATTTTGCTGA+TGG + chr7_4:24885363-24885382 Msa1146830:CDS 40.0%
ACCTCTTTCTGATTGAAGTC+AGG + chr7_4:24885457-24885476 Msa1146830:intron 40.0%
TCCTGACTTCAATCAGAAAG+AGG - chr7_4:24885461-24885480 None:intergenic 40.0%
!! TCATTTTGAGGGAAGGATTC+AGG - chr7_4:24885515-24885534 None:intergenic 40.0%
TCCTTCCCTCAAAATGATGT+TGG + chr7_4:24885518-24885537 Msa1146830:CDS 40.0%
!! TCCAACATCATTTTGAGGGA+AGG - chr7_4:24885522-24885541 None:intergenic 40.0%
! GAGTCTCCAACATCATTTTG+AGG - chr7_4:24885527-24885546 None:intergenic 40.0%
CATTGTGTGACAGAAAACAG+TGG - chr7_4:24885610-24885629 None:intergenic 40.0%
! CACTGTTTTCTGTCACACAA+TGG + chr7_4:24885608-24885627 Msa1146830:CDS 40.0%
! ACGTCTGATGATGTTTCTTC+TGG + chr7_4:24885642-24885661 Msa1146830:CDS 40.0%
!! TGATGTTTCTTCTGGAGTGT+TGG + chr7_4:24885650-24885669 Msa1146830:CDS 40.0%
CGTGTATTCAGAAGCTGAAT+TGG + chr7_4:24885750-24885769 Msa1146830:intron 40.0%
ATTCAGAAGCTGAATTGGCT+AGG + chr7_4:24885755-24885774 Msa1146830:intron 40.0%
!! CATGTCTATTTTCTGGTGAG+TGG + chr7_4:24885885-24885904 Msa1146830:CDS 40.0%
GAAGGATCAAGTGTCAAGTT+TGG + chr7_4:24885938-24885957 Msa1146830:CDS 40.0%
CACAGAATCCACCAACAATA+AGG + chr7_4:24885964-24885983 Msa1146830:CDS 40.0%
AATCTCCACTTTGCACCACT+TGG - chr7_4:24880699-24880718 None:intergenic 45.0%
!!! CCCTTTTGGCTTCAACTCTT+TGG - chr7_4:24880890-24880909 None:intergenic 45.0%
! AGGGTGTGCTTGAATTTTGC+AGG + chr7_4:24881281-24881300 Msa1146830:intron 45.0%
! CATAGAGTTTGCTCGGTCAA+AGG - chr7_4:24881339-24881358 None:intergenic 45.0%
CGCATGACAGCAATAAAGGA+TGG - chr7_4:24881374-24881393 None:intergenic 45.0%
TGGACGCATGACAGCAATAA+AGG - chr7_4:24881378-24881397 None:intergenic 45.0%
! TGTGTTAATCCTCTGGTTCC+TGG + chr7_4:24881494-24881513 Msa1146830:intron 45.0%
! GTGTTAATCCTCTGGTTCCT+GGG + chr7_4:24881495-24881514 Msa1146830:intron 45.0%
CGGCTGAACTTCAGATTATC+AGG - chr7_4:24881531-24881550 None:intergenic 45.0%
!!! GGGTGGAACAATTTTTGGCT+AGG - chr7_4:24881567-24881586 None:intergenic 45.0%
GTTCCACCCAAAATCGAACT+CGG + chr7_4:24881578-24881597 Msa1146830:intron 45.0%
TTCCACCCAAAATCGAACTC+GGG + chr7_4:24881579-24881598 Msa1146830:intron 45.0%
! GAGAACCCGAGTTCGATTTT+GGG - chr7_4:24881587-24881606 None:intergenic 45.0%
! GGCCTGCAAGGTATCTAATT+AGG + chr7_4:24882205-24882224 Msa1146830:intron 45.0%
TTCCATCAAGTGAAGCTCAG+GGG - chr7_4:24882727-24882746 None:intergenic 45.0%
CATTCCATCAAGTGAAGCTC+AGG - chr7_4:24882729-24882748 None:intergenic 45.0%
ACCAACACAGAGAAGGTTGA+AGG + chr7_4:24882835-24882854 Msa1146830:intron 45.0%
TCCTTCAACCTTCTCTGTGT+TGG - chr7_4:24882839-24882858 None:intergenic 45.0%
AAGGTTGAAGGATGCTTCCT+GGG + chr7_4:24882847-24882866 Msa1146830:intron 45.0%
AACATGACCTTGAAGCCTCT+AGG - chr7_4:24882898-24882917 None:intergenic 45.0%
! TTTAGAAGGTGCAACTGGCA+TGG - chr7_4:24882988-24883007 None:intergenic 45.0%
AAATATTACTCCCTCCGTCC+CGG + chr7_4:24883512-24883531 Msa1146830:intron 45.0%
GCTCAGATATTATAGGACGG+AGG + chr7_4:24883723-24883742 Msa1146830:intron 45.0%
TCACAACTTCCGCTGAATTC+CGG + chr7_4:24883783-24883802 Msa1146830:intron 45.0%
!!! GAATTACCGATTTTGGAGCG+TGG - chr7_4:24883814-24883833 None:intergenic 45.0%
AGGTCATGTGCAATTGCCTT+GGG + chr7_4:24884316-24884335 Msa1146830:intron 45.0%
! TTGGGAACCAAGTAGCTTGT+GGG + chr7_4:24884334-24884353 Msa1146830:intron 45.0%
TCCCAGGCTTAGTGTAATGA+TGG + chr7_4:24884392-24884411 Msa1146830:intron 45.0%
TTTCACCATACACTTGGCTG+AGG + chr7_4:24884423-24884442 Msa1146830:intron 45.0%
CAAATCCTCAGCCAAGTGTA+TGG - chr7_4:24884431-24884450 None:intergenic 45.0%
AATGTATGCCAAGGATCGTG+AGG + chr7_4:24884676-24884695 Msa1146830:intron 45.0%
GCAGAATCTCAAACAGGAAG+TGG + chr7_4:24884897-24884916 Msa1146830:intron 45.0%
TGATCACGCAGCATGACATA+TGG - chr7_4:24885303-24885322 None:intergenic 45.0%
TGTGACAGAAAACAGTGGGA+AGG - chr7_4:24885605-24885624 None:intergenic 45.0%
!! CTATTTTCTGGTGAGTGGCA+AGG + chr7_4:24885890-24885909 Msa1146830:CDS 45.0%
TGACACTTGATCCTTCAACC+AGG - chr7_4:24885934-24885953 None:intergenic 45.0%
TTCAAGACCAACATCTGAGG+TGG - chr7_4:24886004-24886023 None:intergenic 45.0%
GTCTTCAAGACCAACATCTG+AGG - chr7_4:24886007-24886026 None:intergenic 45.0%
!! AGATGTTGGTCTTGAAGACC+AGG + chr7_4:24886008-24886027 Msa1146830:CDS 45.0%
! ATTAGCAGATGGTGGTAACC+TGG - chr7_4:24886029-24886048 None:intergenic 45.0%
TTACCACCATCTGCTAATGC+CGG + chr7_4:24886031-24886050 Msa1146830:CDS 45.0%
! TTTTCACCGGCATTAGCAGA+TGG - chr7_4:24886040-24886059 None:intergenic 45.0%
TCTGCTAATGCCGGTGAAAA+TGG + chr7_4:24886040-24886059 Msa1146830:CDS 45.0%
! TTAGGACGCACCATTTTCAC+CGG - chr7_4:24886053-24886072 None:intergenic 45.0%
!! AAAAAATAACTATTAATTTA+GGG - chr7_4:24883462-24883481 None:intergenic 5.0%
!! TAAAAAATAACTATTAATTT+AGG - chr7_4:24883463-24883482 None:intergenic 5.0%
AGACTCCAAGTGGTGCAAAG+TGG + chr7_4:24880691-24880710 Msa1146830:CDS 50.0%
! AACCCGAGTTCGATTTTGGG+TGG - chr7_4:24881584-24881603 None:intergenic 50.0%
! GGAGAACCCGAGTTCGATTT+TGG - chr7_4:24881588-24881607 None:intergenic 50.0%
GAAGGTTGAAGGATGCTTCC+TGG + chr7_4:24882846-24882865 Msa1146830:intron 50.0%
CTAACCTCCTAGAGGCTTCA+AGG + chr7_4:24882888-24882907 Msa1146830:intron 50.0%
ATGACCTTGAAGCCTCTAGG+AGG - chr7_4:24882895-24882914 None:intergenic 50.0%
AACTGGCATGGTTGTGAAGG+TGG - chr7_4:24882976-24882995 None:intergenic 50.0%
TGCAACTGGCATGGTTGTGA+AGG - chr7_4:24882979-24882998 None:intergenic 50.0%
ATGGGTCAGATATTCCGGGA+CGG - chr7_4:24883529-24883548 None:intergenic 50.0%
AGCGGAAGTTGTGACCAGAA+GGG - chr7_4:24883777-24883796 None:intergenic 50.0%
GGCAATTGCACATGACCTCA+AGG - chr7_4:24884314-24884333 None:intergenic 50.0%
GAGGTCATGTGCAATTGCCT+TGG + chr7_4:24884315-24884334 Msa1146830:intron 50.0%
CACAAGCTACTTGGTTCCCA+AGG - chr7_4:24884335-24884354 None:intergenic 50.0%
CTTGGGAACCAAGTAGCTTG+TGG + chr7_4:24884333-24884352 Msa1146830:intron 50.0%
! ACCAAGTAGCTTGTGGGTGA+AGG + chr7_4:24884340-24884359 Msa1146830:intron 50.0%
TCCTTCACCCACAAGCTACT+TGG - chr7_4:24884344-24884363 None:intergenic 50.0%
GTGGGTGAAGGAAATCTGCA+TGG + chr7_4:24884352-24884371 Msa1146830:intron 50.0%
GAATTGAGCTCACGTTTCCC+AGG + chr7_4:24884376-24884395 Msa1146830:intron 50.0%
! GTTGGAGACTCAAAGTGCCA+AGG + chr7_4:24885536-24885555 Msa1146830:CDS 50.0%
TCGATGAGAGTTGTCTCGGT+TGG - chr7_4:24885809-24885828 None:intergenic 50.0%
! ATGATGGAGTTTGGTCGCGA+TGG + chr7_4:24885854-24885873 Msa1146830:CDS 50.0%
! ATCCTCTGGTTCCTGGGAGA+AGG + chr7_4:24881501-24881520 Msa1146830:intron 55.0%
! TCCTCTGGTTCCTGGGAGAA+GGG + chr7_4:24881502-24881521 Msa1146830:intron 55.0%
ATGGGAGAGTTTGGCCTGCA+AGG + chr7_4:24882193-24882212 Msa1146830:CDS 55.0%
TGCCCCTGAGCTTCACTTGA+TGG + chr7_4:24882722-24882741 Msa1146830:intron 55.0%
AGGATGCTTCCTGGGTCTTG+AGG + chr7_4:24882855-24882874 Msa1146830:intron 55.0%
GGATGCTTCCTGGGTCTTGA+GGG + chr7_4:24882856-24882875 Msa1146830:intron 55.0%
GGCTAGCACTAACCTCCTAG+AGG + chr7_4:24882880-24882899 Msa1146830:intron 55.0%
GTCAGATATTCCGGGACGGA+GGG - chr7_4:24883525-24883544 None:intergenic 55.0%
GCGGAAGTTGTGACCAGAAG+GGG - chr7_4:24883776-24883795 None:intergenic 55.0%
CAGCGGAAGTTGTGACCAGA+AGG - chr7_4:24883778-24883797 None:intergenic 55.0%
AACTTCCGCTGAATTCCGGC+AGG + chr7_4:24883787-24883806 Msa1146830:intron 55.0%
ACTTCCGCTGAATTCCGGCA+GGG + chr7_4:24883788-24883807 Msa1146830:intron 55.0%
GTAAAAGGGTGGAGCTGCAG+TGG - chr7_4:24883912-24883931 None:intergenic 55.0%
TCGTGTGGAGGGAAAACCCT+AGG + chr7_4:24884260-24884279 Msa1146830:intron 55.0%
CGTGTGGAGGGAAAACCCTA+GGG + chr7_4:24884261-24884280 Msa1146830:intron 55.0%
TTGAGGGAAGGATTCAGGCG+AGG - chr7_4:24885510-24885529 None:intergenic 55.0%
! GAGAGTTGTCTCGGTTGGCT+CGG - chr7_4:24885804-24885823 None:intergenic 55.0%
! CCAACATCTGAGGTGGACAC+AGG - chr7_4:24885997-24886016 None:intergenic 55.0%
CCTGTGTCCACCTCAGATGT+TGG + chr7_4:24885994-24886013 Msa1146830:CDS 55.0%
TCACCGGCATTAGCAGATGG+TGG - chr7_4:24886037-24886056 None:intergenic 55.0%
! CCTCTGGTTCCTGGGAGAAG+GGG + chr7_4:24881503-24881522 Msa1146830:intron 60.0%
! CTCTGGTTCCTGGGAGAAGG+GGG + chr7_4:24881504-24881523 Msa1146830:intron 60.0%
TGCTTCCTGGGTCTTGAGGG+AGG + chr7_4:24882859-24882878 Msa1146830:intron 60.0%
GGGCGAACTCGATCCTGACA+GGG - chr7_4:24883160-24883179 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG - chr7_4:24883526-24883545 None:intergenic 60.0%
!!! ATTTTGGAGCGTGGCCCTGC+CGG - chr7_4:24883805-24883824 None:intergenic 60.0%
GCAGGGCCACGCTCCAAAAT+CGG + chr7_4:24883805-24883824 Msa1146830:intron 60.0%
ACCAGCAGCCTCACGATCCT+TGG - chr7_4:24884687-24884706 None:intergenic 60.0%
GTTGCGCGTCTCCTGGTTGA+AGG + chr7_4:24885920-24885939 Msa1146830:CDS 60.0%
CCCCTTCTCCCAGGAACCAG+AGG - chr7_4:24881506-24881525 None:intergenic 65.0%
TATCAGGGCCCCCTTCTCCC+AGG - chr7_4:24881515-24881534 None:intergenic 65.0%
! GCTAGCCTCCCTCAAGACCC+AGG - chr7_4:24882867-24882886 None:intergenic 65.0%
GGGGCGAACTCGATCCTGAC+AGG - chr7_4:24883161-24883180 None:intergenic 65.0%
GTGGCCCTGCCGGAATTCAG+CGG - chr7_4:24883795-24883814 None:intergenic 65.0%
GCCAAGGATCGTGAGGCTGC+TGG + chr7_4:24884683-24884702 Msa1146830:intron 65.0%
!! GTTGTCTCGGTTGGCTCGGC+AGG - chr7_4:24885800-24885819 None:intergenic 65.0%
TGTGTGCGTTGCGCGTCTCC+TGG + chr7_4:24885913-24885932 Msa1146830:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 24880630 24886072 24880630 ID=Msa1146830;Name=Msa1146830
chr7_4 mRNA 24880630 24886072 24880630 ID=Msa1146830-mRNA-1;Parent=Msa1146830;Name=Msa1146830-mRNA-1;_AED=0.30;_eAED=0.31;_QI=0|0.16|0|1|1|1|7|0|398
chr7_4 exon 24880630 24880908 24880630 ID=Msa1146830-mRNA-1:exon:6171;Parent=Msa1146830-mRNA-1
chr7_4 exon 24881051 24881063 24881051 ID=Msa1146830-mRNA-1:exon:6172;Parent=Msa1146830-mRNA-1
chr7_4 exon 24881303 24881424 24881303 ID=Msa1146830-mRNA-1:exon:6173;Parent=Msa1146830-mRNA-1
chr7_4 exon 24882114 24882214 24882114 ID=Msa1146830-mRNA-1:exon:6174;Parent=Msa1146830-mRNA-1
chr7_4 exon 24885212 24885388 24885212 ID=Msa1146830-mRNA-1:exon:6175;Parent=Msa1146830-mRNA-1
chr7_4 exon 24885479 24885671 24885479 ID=Msa1146830-mRNA-1:exon:6176;Parent=Msa1146830-mRNA-1
chr7_4 exon 24885761 24886072 24885761 ID=Msa1146830-mRNA-1:exon:6177;Parent=Msa1146830-mRNA-1
chr7_4 CDS 24880630 24880908 24880630 ID=Msa1146830-mRNA-1:cds;Parent=Msa1146830-mRNA-1
chr7_4 CDS 24881051 24881063 24881051 ID=Msa1146830-mRNA-1:cds;Parent=Msa1146830-mRNA-1
chr7_4 CDS 24881303 24881424 24881303 ID=Msa1146830-mRNA-1:cds;Parent=Msa1146830-mRNA-1
chr7_4 CDS 24882114 24882214 24882114 ID=Msa1146830-mRNA-1:cds;Parent=Msa1146830-mRNA-1
chr7_4 CDS 24885212 24885388 24885212 ID=Msa1146830-mRNA-1:cds;Parent=Msa1146830-mRNA-1
chr7_4 CDS 24885479 24885671 24885479 ID=Msa1146830-mRNA-1:cds;Parent=Msa1146830-mRNA-1
chr7_4 CDS 24885761 24886072 24885761 ID=Msa1146830-mRNA-1:cds;Parent=Msa1146830-mRNA-1
Gene Sequence

>Msa1146830

ATGATCCCAAGAAAGTTTGTGGAGAAATATGGAGAAGGTTTATCAAATGCTATATATCTAAAGACTCCAAGTGGTGCAAAGTGGAGATTAGATTTGGTAAAAAGTGATGGAAAAATATGGTTTCAAAAGGGTTGGAAAGAATTTGTGAAGTATCATTCTTTATCTCAAGGCCATCTTCTGGTTTTCAAATATGGAAGAACTTCCCATTTTGAAGTGCACATCTTCGATAAGAGTGCCTTAGAGATAAAATACCCTTTCCAAAGAGTTGAAGCCAAAAGGGAAATTGGAAAAGGAAAGCAATTGGCTTTAGCTAAGAAAGTTACAACCTTTGACCGAGCAAACTCTATGAGAACTTGTAATCCATCCTTTATTGCTGTCATGCGTCCATCATACATTGATGCTGCTTGTAATCTGAACATACCAAGTGAGTTTGGTAAAAGACACTTATTAGGTTTAGGAAAAAAGCAAGGAGATATTCATCTAAGGTTGTTAAATGGGAGAGTTTGGCCTGCAAGGAAATTAAGTCATGATCATTTGATATTTATGCAGCGTAAGGGAAGGCTGCCTGCTTGCTTTGCAAGATGTTTTAGTTTGCAAGTTGGTCCATATGTCATGCTGCGTGATCATAACTACAATGAGATTGAGGTTGCCATTGAAAAAAAGAACGGGAAAGTCTATTTTGCTGATGGATGGAATCTCTTTGGAGATGAATTGGAATATCCTCGCCTGAATCCTTCCCTCAAAATGATGTTGGAGACTCAAAGTGCCAAGGACTATAGAAAGTCCTTTGTTAGATATGGTTTGAATGCTCTTTTCCTTCCCACTGTTTTCTGTCACACAATGGTTAAGCAGTTGACGTCTGATGATGTTTCTTCTGGAGTGTTGAAGCTGAATTGGCTAGGTTTCTGTCAATCTGCATTTCCTGCCGAGCCAACCGAGACAACTCTCATCGATTATCTTGGTTATCCTTGGAAATTGATGATGGAGTTTGGTCGCGATGGAGATATGACATGTCTATTTTCTGGTGAGTGGCAAGGTGTGTGCGTTGCGCGTCTCCTGGTTGAAGGATCAAGTGTCAAGTTTGGTGTCACAGAATCCACCAACAATAAGGTTATATACCTGTGTCCACCTCAGATGTTGGTCTTGAAGACCAGGTTACCACCATCTGCTAATGCCGGTGAAAATGGTGCGTCCTAA
Protein sequence

>Msa1146830

MIPRKFVEKYGEGLSNAIYLKTPSGAKWRLDLVKSDGKIWFQKGWKEFVKYHSLSQGHLLVFKYGRTSHFEVHIFDKSALEIKYPFQRVEAKREIGKGKQLALAKKVTTFDRANSMRTCNPSFIAVMRPSYIDAACNLNIPSEFGKRHLLGLGKKQGDIHLRLLNGRVWPARKLSHDHLIFMQRKGRLPACFARCFSLQVGPYVMLRDHNYNEIEVAIEKKNGKVYFADGWNLFGDELEYPRLNPSLKMMLETQSAKDYRKSFVRYGLNALFLPTVFCHTMVKQLTSDDVSSGVLKLNWLGFCQSAFPAEPTETTLIDYLGYPWKLMMEFGRDGDMTCLFSGEWQGVCVARLLVEGSSVKFGVTESTNNKVIYLCPPQMLVLKTRLPPSANAGENGAS*