AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1147510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1147510 MtrunA17_Chr7g0234361 78.371 356 19 4 1 310 1 344 0.0 531
Msa1147510 MtrunA17_Chr6g0476121 56.250 336 143 3 190 521 308 643 9.57e-127 384
Msa1147510 MtrunA17_Chr7g0252211 56.250 336 143 3 190 521 422 757 3.24e-126 386
Msa1147510 MtrunA17_Chr6g0476111 55.952 336 144 3 190 521 359 694 7.35e-126 383
Msa1147510 MtrunA17_Chr5g0399801 46.207 290 142 8 235 521 811 1089 3.89e-69 240
Msa1147510 MtrunA17_Chr4g0003501 42.089 316 165 7 210 521 654 955 1.37e-65 229
Msa1147510 MtrunA17_Chr4g0003511 42.230 296 153 6 231 521 770 1052 5.32e-65 228
Msa1147510 MtrunA17_Chr7g0255181 30.211 331 202 6 192 517 395 701 5.05e-45 168
Msa1147510 MtrunA17_Chr7g0232841 34.323 303 153 10 231 521 260 528 9.18e-44 162
Msa1147510 MtrunA17_Chr7g0232811 33.775 302 155 9 231 521 272 539 3.91e-43 160
Msa1147510 MtrunA17_Chr8g0354821 34.130 293 180 8 231 517 399 684 3.46e-42 160
Msa1147510 MtrunA17_Chr3g0080761 31.061 396 231 12 157 517 272 660 3.52e-42 160
Msa1147510 MtrunA17_Chr8g0368911 32.353 306 189 10 192 491 456 749 2.50e-41 158
Msa1147510 MtrunA17_Chr8g0368901 33.660 306 185 10 192 491 463 756 4.81e-41 157
Msa1147510 MtrunA17_Chr1g0163051 32.803 314 191 9 192 498 352 652 1.14e-39 152
Msa1147510 MtrunA17_Chr8g0369301 35.632 261 153 7 235 491 487 736 1.30e-39 153
Msa1147510 MtrunA17_Chr1g0163041 32.692 312 192 9 192 497 271 570 2.49e-39 150
Msa1147510 MtrunA17_Chr7g0232981 33.910 289 152 7 234 521 266 516 2.87e-38 147
Msa1147510 MtrunA17_Chr3g0094881 30.968 310 192 10 192 491 325 622 2.15e-35 140
Msa1147510 MtrunA17_Chr1g0170651 33.657 309 157 10 220 521 279 546 1.60e-34 137
Msa1147510 MtrunA17_Chr6g0467401 29.206 315 195 11 190 491 264 563 9.54e-33 131
Msa1147510 MtrunA17_Chr6g0467381 29.206 315 195 11 190 491 264 563 1.27e-32 131
Msa1147510 MtrunA17_Chr6g0467421 29.206 315 195 11 190 491 264 563 3.46e-32 130
Msa1147510 MtrunA17_Chr6g0467531 28.707 317 194 12 190 491 264 563 6.45e-32 129
Msa1147510 MtrunA17_Chr1g0183321 31.085 341 149 14 235 517 430 742 1.56e-31 129
Msa1147510 MtrunA17_Chr5g0403241 29.819 332 161 11 231 521 1207 1507 1.41e-28 120
Msa1147510 MtrunA17_Chr4g0075321 35.294 221 118 5 302 521 868 1064 2.85e-28 119
Msa1147510 MtrunA17_Chr6g0467411 27.244 312 199 11 193 491 185 481 3.88e-28 117
Msa1147510 MtrunA17_Chr1g0190311 30.058 346 153 14 234 519 326 642 4.11e-28 118
Msa1147510 MtrunA17_Chr8g0373821 35.385 195 98 3 303 492 346 517 3.58e-26 112
Msa1147510 MtrunA17_Chr7g0262001 28.743 334 164 11 235 517 388 698 5.73e-26 112
Msa1147510 MtrunA17_Chr7g0232751 49.438 89 45 0 433 521 31 119 3.65e-25 100
Msa1147510 MtrunA17_Chr2g0306961 29.851 201 132 4 293 491 269 462 7.02e-23 101
Msa1147510 MtrunA17_Chr1g0149581 37.363 91 47 2 430 520 1585 1665 9.20e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1147510 AT5G13960.2 55.060 336 146 4 190 521 156 490 1.16e-127 382
Msa1147510 AT5G13960.1 55.060 336 146 4 190 521 290 624 5.66e-127 384
Msa1147510 AT2G22740.2 40.064 312 163 9 220 521 493 790 3.89e-57 204
Msa1147510 AT2G22740.1 40.064 312 163 9 220 521 493 790 3.89e-57 204
Msa1147510 AT2G35160.5 35.014 357 187 9 173 521 439 758 3.75e-56 201
Msa1147510 AT2G35160.2 35.014 357 187 9 173 521 475 794 5.80e-56 201
Msa1147510 AT2G35160.3 35.014 357 187 9 173 521 475 794 5.80e-56 201
Msa1147510 AT2G35160.1 35.014 357 187 9 173 521 475 794 5.80e-56 201
Msa1147510 AT2G35160.4 35.014 357 187 9 173 521 475 794 5.80e-56 201
Msa1147510 AT1G73100.1 29.019 479 311 12 45 517 210 665 1.78e-46 172
Msa1147510 AT2G33290.1 35.526 304 163 10 210 491 346 638 1.51e-42 161
Msa1147510 AT2G33290.3 35.526 304 163 10 210 491 346 638 1.51e-42 161
Msa1147510 AT2G33290.4 35.526 304 163 10 210 491 346 638 1.51e-42 161
Msa1147510 AT2G33290.2 35.526 304 163 10 210 491 346 638 1.51e-42 161
Msa1147510 AT4G13460.1 32.581 310 193 9 192 495 342 641 7.98e-42 159
Msa1147510 AT4G13460.2 32.581 310 193 9 192 495 342 641 7.98e-42 159
Msa1147510 AT5G04940.2 32.215 298 188 7 225 517 378 666 4.21e-41 157
Msa1147510 AT5G04940.1 32.215 298 188 7 225 517 378 666 4.21e-41 157
Msa1147510 AT1G17770.1 31.250 304 188 9 225 517 396 689 7.24e-35 139
Msa1147510 AT2G23740.1 32.544 338 166 14 216 520 1066 1374 1.03e-31 130
Msa1147510 AT2G23740.3 32.544 338 166 14 216 520 1073 1381 1.06e-31 130
Msa1147510 AT2G23740.6 32.544 338 166 14 216 520 1073 1381 1.06e-31 130
Msa1147510 AT2G23740.2 32.544 338 166 14 216 520 1073 1381 1.06e-31 130
Msa1147510 AT3G04380.2 28.107 338 167 10 235 519 119 433 2.63e-26 112
Msa1147510 AT3G04380.1 28.107 338 167 10 235 519 146 460 3.05e-26 112
Msa1147510 AT3G04380.4 28.107 338 167 10 235 519 146 460 3.52e-26 112
Msa1147510 AT3G04380.3 28.107 338 167 10 235 519 130 444 3.60e-26 112
Msa1147510 AT3G04380.6 28.107 338 167 10 235 519 119 433 4.40e-26 111
Msa1147510 AT3G04380.5 28.107 338 167 10 235 519 103 417 4.41e-26 111
Msa1147510 AT1G04050.2 26.901 342 166 10 234 519 408 721 1.17e-24 108
Msa1147510 AT1G04050.1 26.901 342 166 10 234 519 408 721 1.17e-24 108
Msa1147510 AT1G04050.3 32.524 206 109 6 318 519 438 617 1.25e-24 108
Msa1147510 AT2G24740.1 29.352 293 183 10 231 517 477 751 2.09e-24 107
Msa1147510 AT2G23740.4 32.959 267 121 13 216 449 1073 1314 1.11e-21 100
Msa1147510 AT2G23740.5 32.959 267 121 13 216 449 1073 1314 1.11e-21 100
Msa1147510 AT3G03750.2 31.020 245 127 8 280 520 143 349 2.89e-20 92.8
Msa1147510 AT4G30860.1 28.218 202 103 6 319 520 305 464 5.91e-12 68.6

Find 103 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGATGGACTTGACTTT+AGG 0.172830 7_4:+26797405 Msa1147510:CDS
TGCATAGATGCTGGTTCTTT+TGG 0.193774 7_4:+26800920 Msa1147510:CDS
ATTGAATCTTAGAGTGATTC+TGG 0.200218 7_4:-26797088 None:intergenic
AATGATTCACTTGTCTTTGA+TGG 0.248403 7_4:+26797392 Msa1147510:CDS
TTGGCTTTAGGTTCATTTAA+TGG 0.273794 7_4:+26799625 Msa1147510:intron
CTTTGATGGACTTGACTTTA+GGG 0.276447 7_4:+26797406 Msa1147510:CDS
TCTTACCGCCCAACCTTTCT+TGG 0.287241 7_4:-26800582 None:intergenic
GAAACTTTGTTTCCACATTT+AGG 0.290820 7_4:-26800428 None:intergenic
GCTTTACCTGTGGGTGCAAC+TGG 0.322517 7_4:-26799858 None:intergenic
CAGGAACTCACCTATGACTA+TGG 0.342829 7_4:+26802192 Msa1147510:intron
TGGAAGTAAAGAGGAAAGTT+TGG 0.346273 7_4:+26797172 Msa1147510:CDS
CTCTTATTGTTAATATCATC+TGG 0.346904 7_4:-26797242 None:intergenic
CCAGCATCTATGCAATATTC+AGG 0.354345 7_4:-26800911 None:intergenic
TGTCCTTGAGAGAAACATCT+AGG 0.383690 7_4:+26797435 Msa1147510:CDS
AGAAGACATACCTCCCTATC+AGG 0.387240 7_4:+26801051 Msa1147510:CDS
TGTTCTTGTGCTAATCATAA+TGG 0.392666 7_4:+26800156 Msa1147510:CDS
AGCAAGAATCGACACAAGAT+AGG 0.395673 7_4:+26798334 Msa1147510:CDS
CACACAATCAATGGTGTAGA+TGG 0.399488 7_4:+26800722 Msa1147510:CDS
GCACCAGTTGTCGAGTATAT+TGG 0.400887 7_4:+26800629 Msa1147510:CDS
ATTGATAACGAATACGTTCC+TGG 0.401461 7_4:+26798819 Msa1147510:CDS
TGGAAACAAAGTTTCTCAAC+AGG 0.404546 7_4:+26800436 Msa1147510:CDS
AGTATCTGATAAATAAGCTT+CGG 0.405640 7_4:+26798856 Msa1147510:CDS
TTGCATCCCGCAGCACTAGA+TGG 0.412772 7_4:-26800105 None:intergenic
CTTAGCAAGGCAACGAAGAT+TGG 0.415840 7_4:-26797462 None:intergenic
CATGTTGAAAAGATTGAACT+TGG 0.416250 7_4:+26797152 Msa1147510:CDS
GTATCTGATAAATAAGCTTC+GGG 0.422102 7_4:+26798857 Msa1147510:CDS
CTTACCGCCCAACCTTTCTT+GGG 0.422197 7_4:-26800581 None:intergenic
ATTAGCACAAGAACATCGTT+TGG 0.435566 7_4:-26800148 None:intergenic
ACACATTGTACAAAGAGGTT+TGG 0.447308 7_4:-26800977 None:intergenic
TTCTTTAAGTTTGGTATGCA+AGG 0.458357 7_4:+26799776 Msa1147510:intron
ATCGTACTCCCAAGAAAGGT+TGG 0.459933 7_4:+26800573 Msa1147510:CDS
TACAAAGAGGAATACCTGAT+AGG 0.463396 7_4:-26801065 None:intergenic
TGGAGGATCATCAAAATCAT+TGG 0.466153 7_4:-26799838 None:intergenic
CAATCTTCGTTGCCTTGCTA+AGG 0.470290 7_4:+26797463 Msa1147510:CDS
TTCTGACAATGAGGCTATGA+TGG 0.479441 7_4:+26797040 Msa1147510:CDS
GATAAATTGCTTATAGGCAA+TGG 0.479915 7_4:-26800857 None:intergenic
GATTGTTTGCACACAATCAA+TGG 0.481537 7_4:+26800713 Msa1147510:CDS
ACACCAATATACTCGACAAC+TGG 0.483092 7_4:-26800632 None:intergenic
ACATGGGACTTTATCCCATC+AGG 0.487648 7_4:+26800605 Msa1147510:CDS
GAGTGTGTAACCATAGTCAT+AGG 0.489551 7_4:-26802202 None:intergenic
ACAAAGAGGAATACCTGATA+GGG 0.490411 7_4:-26801064 None:intergenic
CTTGAACTTGAATGAGAGCA+AGG 0.492562 7_4:-26797332 None:intergenic
GCTTCGGGAACTTGCTAAAG+TGG 0.493084 7_4:+26798872 Msa1147510:CDS
AGTCTTGAACTCACTCTTGT+TGG 0.498838 7_4:-26797065 None:intergenic
TCGTACTCCCAAGAAAGGTT+GGG 0.500282 7_4:+26800574 Msa1147510:CDS
AGAGGTTTGGTTCACATCCA+TGG 0.504457 7_4:-26800964 None:intergenic
CTAGATGGAACTTCAATGCT+TGG 0.505910 7_4:-26800090 None:intergenic
TCTTCTCAAAGAGTTGAACT+TGG 0.508459 7_4:-26797306 None:intergenic
CGACAACTGGTGCACCTGAT+GGG 0.509774 7_4:-26800619 None:intergenic
TACTTCGAAGTAGTGATTCC+AGG 0.513375 7_4:-26798837 None:intergenic
GTTTCAAGATTTATCAACCA+TGG 0.515474 7_4:+26800947 Msa1147510:CDS
GTTTATCGTACTCCCAAGAA+AGG 0.517387 7_4:+26800569 Msa1147510:CDS
TCGACAACTGGTGCACCTGA+TGG 0.518260 7_4:-26800620 None:intergenic
GAAGTTCCATCTAGTGCTGC+GGG 0.529357 7_4:+26800099 Msa1147510:CDS
AAACTCTTTCTTCTTCTCCA+AGG 0.531848 7_4:+26799663 Msa1147510:CDS
TGCTAAAGTGGGAACATACA+AGG 0.533120 7_4:+26798884 Msa1147510:CDS
TTTCATACAATAACATTGGC+CGG 0.533464 7_4:+26800187 Msa1147510:CDS
CCTGAATATTGCATAGATGC+TGG 0.535805 7_4:+26800911 Msa1147510:CDS
CTAAGTAGAGACGATGAGCT+AGG 0.538306 7_4:+26800656 Msa1147510:CDS
TTTAGGTTCATTTAATGGAA+GGG 0.538367 7_4:+26799630 Msa1147510:intron
CTTTAGGTTCATTTAATGGA+AGG 0.538474 7_4:+26799629 Msa1147510:intron
CTAGACATCGTGGTCGAATG+TGG 0.546755 7_4:+26800386 Msa1147510:CDS
AAGTTTGGTATCAACATCAA+AGG 0.550778 7_4:+26797187 Msa1147510:CDS
GTCCTTGAGAGAAACATCTA+GGG 0.551978 7_4:+26797436 Msa1147510:CDS
GATTGAACTTGGAAGTAAAG+AGG 0.553834 7_4:+26797163 Msa1147510:CDS
AAGGTTGGGCGGTAAGAACA+TGG 0.558115 7_4:+26800588 Msa1147510:CDS
TCTCATTCAAGTTCAAGAAG+TGG 0.562140 7_4:+26797338 Msa1147510:CDS
GCAAGAATCGACACAAGATA+GGG 0.566361 7_4:+26798335 Msa1147510:CDS
GGGCTTAACTTACCGACTTG+AGG 0.566843 7_4:+26800457 Msa1147510:CDS
TTACCTGTGGGTGCAACTGG+AGG 0.570878 7_4:-26799855 None:intergenic
GAAAATATAATCATTTCCGT+TGG 0.575559 7_4:-26800684 None:intergenic
TGAGAACACATTGTACAAAG+AGG 0.579762 7_4:-26800982 None:intergenic
AACCCTAGATGTTTCTCTCA+AGG 0.580795 7_4:-26797438 None:intergenic
GATAGTGTGTCTGATTCTGA+TGG 0.580918 7_4:+26802225 Msa1147510:CDS
TGTGGACCGCAATGTGGATG+CGG 0.589925 7_4:+26800404 Msa1147510:CDS
TGCTGCGGGATGCAATTGCA+AGG 0.591722 7_4:+26800113 Msa1147510:CDS
TCAATGTCATTGTGGTGCAA+AGG 0.596456 7_4:+26802263 Msa1147510:CDS
TTTGATGGACTTGACTTTAG+GGG 0.596694 7_4:+26797407 Msa1147510:CDS
GTATGCAAGGACATTAGCAA+TGG 0.598177 7_4:+26799789 Msa1147510:CDS
CTTCGGGAACTTGCTAAAGT+GGG 0.602929 7_4:+26798873 Msa1147510:CDS
GATCCTCCAGTTGCACCCAC+AGG 0.606455 7_4:+26799852 Msa1147510:CDS
TACTAAGAGTTCTGACAATG+AGG 0.616993 7_4:+26797031 Msa1147510:CDS
AATGTTATTGTATGAAAACT+CGG 0.621218 7_4:-26800181 None:intergenic
CATTCGACCACGATGTCTAG+AGG 0.624366 7_4:-26800383 None:intergenic
CAATGGTGTAGATGGAAGAG+AGG 0.625940 7_4:+26800730 Msa1147510:CDS
GATGATATTAACAATAAGAG+AGG 0.626054 7_4:+26797245 Msa1147510:CDS
TGTGGATGCGGACCTAAATG+TGG 0.629564 7_4:+26800416 Msa1147510:CDS
TGAAGTTCCATCTAGTGCTG+CGG 0.634941 7_4:+26800098 Msa1147510:CDS
ATTGTAGAATGACCTCAAGT+CGG 0.636167 7_4:-26800469 None:intergenic
TTGTATCACACACCTTAGCA+AGG 0.639995 7_4:-26797475 None:intergenic
AAACAGCTTCAATGTCATTG+TGG 0.646249 7_4:+26802255 Msa1147510:CDS
AAGAGGAATACCTGATAGGG+AGG 0.649275 7_4:-26801061 None:intergenic
AGCACTACACGAGTTAGTCT+AGG 0.650447 7_4:-26801019 None:intergenic
GCTGCGGGATGCAATTGCAA+GGG 0.655088 7_4:+26800114 Msa1147510:CDS
AGGTTGGGCGGTAAGAACAT+GGG 0.665196 7_4:+26800589 Msa1147510:CDS
TACTCCCAAGAAAGGTTGGG+CGG 0.669811 7_4:+26800577 Msa1147510:CDS
GTCGAATGTGGACCGCAATG+TGG 0.680163 7_4:+26800398 Msa1147510:CDS
GGAAACAAAGTTTCTCAACA+GGG 0.682009 7_4:+26800437 Msa1147510:CDS
TTAGGTCCGCATCCACATTG+CGG 0.684443 7_4:-26800410 None:intergenic
TATAACATTTACAACAGCAG+CGG 0.694359 7_4:+26797110 Msa1147510:CDS
GATGAGCTAGGAAGTGCCAA+CGG 0.706121 7_4:+26800668 Msa1147510:CDS
GAGTTAGTCTAGGATCTCTG+TGG 0.731534 7_4:-26801009 None:intergenic
GATCGAGCCTCTAGACATCG+TGG 0.739663 7_4:+26800376 Msa1147510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTGATTTTATTAGTTTT+TGG + chr7_4:26798059-26798078 Msa1147510:intron 10.0%
!!! TAATTGATTTTATTAGTTTT+TGG + chr7_4:26798059-26798078 Msa1147510:intron 10.0%
!! ATATATAAAAACAAAAAACA+AGG - chr7_4:26798433-26798452 None:intergenic 10.0%
!!! TTAATATCTTATTAGAATTT+TGG + chr7_4:26799435-26799454 Msa1147510:intron 10.0%
!!! TAATATCTTATTAGAATTTT+GGG + chr7_4:26799436-26799455 Msa1147510:intron 10.0%
!! TAAAATATGTATGAAATTTA+GGG + chr7_4:26800778-26800797 Msa1147510:intron 10.0%
!! TAAATAATTAAGGATATTAT+AGG - chr7_4:26801922-26801941 None:intergenic 10.0%
!!! TAATTATTTTCATACATTTT+GGG + chr7_4:26802095-26802114 Msa1147510:intron 10.0%
!! GTAAAAATTTAATAAACAAT+TGG + chr7_4:26802154-26802173 Msa1147510:intron 10.0%
!! TTAAGTAAGATGTATAAATA+TGG + chr7_4:26797704-26797723 Msa1147510:intron 15.0%
!! TATATAACTTGAGTAAAAAA+AGG + chr7_4:26797798-26797817 Msa1147510:intron 15.0%
!! GAAAATACAATGAAAATTAA+TGG - chr7_4:26798590-26798609 None:intergenic 15.0%
!! ATTAGCAAAAACAATTTATA+AGG + chr7_4:26799257-26799276 Msa1147510:intron 15.0%
!! TTCTAATAAGATATTAAAGT+CGG - chr7_4:26799432-26799451 None:intergenic 15.0%
!! TAAAGCAAAAAAATATTAGA+TGG + chr7_4:26799875-26799894 Msa1147510:intron 15.0%
!!! GTTTTTTCATTTTCAAAAAA+GGG - chr7_4:26799908-26799927 None:intergenic 15.0%
!!! TGTTTTTTCATTTTCAAAAA+AGG - chr7_4:26799909-26799928 None:intergenic 15.0%
!! GAAAAAAAAAAAAGGAAAAA+GGG - chr7_4:26799952-26799971 None:intergenic 15.0%
!!! GCATTATGTTTTAAAATTTT+AGG + chr7_4:26800036-26800055 Msa1147510:intron 15.0%
!! GTAAAATATGTATGAAATTT+AGG + chr7_4:26800777-26800796 Msa1147510:intron 15.0%
!! AAAAAATAACAGTAATAAGA+CGG + chr7_4:26801673-26801692 Msa1147510:intron 15.0%
!!! ACTAGAAATTTTATTTTGAA+AGG + chr7_4:26801727-26801746 Msa1147510:intron 15.0%
!!! GTAATTATTTTCATACATTT+TGG + chr7_4:26802094-26802113 Msa1147510:intron 15.0%
!!! TTATTAAATTTTTACCATGA+AGG - chr7_4:26802149-26802168 None:intergenic 15.0%
!! ATCGTATTTATACAATTATG+AGG + chr7_4:26797764-26797783 Msa1147510:intron 20.0%
!! TTACATGATATCTTATTGAA+TGG + chr7_4:26797848-26797867 Msa1147510:intron 20.0%
!! TACATGATATCTTATTGAAT+GGG + chr7_4:26797849-26797868 Msa1147510:intron 20.0%
!!! AAATCTCAAGTAATTTGTTT+AGG - chr7_4:26797875-26797894 None:intergenic 20.0%
!!! CATGTTTTATTTAAGCTTTA+GGG - chr7_4:26798477-26798496 None:intergenic 20.0%
!!! ACATGTTTTATTTAAGCTTT+AGG - chr7_4:26798478-26798497 None:intergenic 20.0%
!!! TATATCATGATTTTAAATCG+CGG + chr7_4:26798506-26798525 Msa1147510:intron 20.0%
!! TAAAGTTACTCCTAATTAAT+TGG - chr7_4:26798723-26798742 None:intergenic 20.0%
!! AAAATTAAGATAGTATCATG+AGG - chr7_4:26798777-26798796 None:intergenic 20.0%
!! TCGTATTCTAATATTCAATT+TGG + chr7_4:26799606-26799625 Msa1147510:intron 20.0%
!!! GAATATTGTTTCTTTAAGTT+TGG + chr7_4:26799767-26799786 Msa1147510:intron 20.0%
!! CGAAAAAAAAAAAAGGAAAA+AGG - chr7_4:26799953-26799972 None:intergenic 20.0%
!! AATGTTATTGTATGAAAACT+CGG - chr7_4:26800184-26800203 None:intergenic 20.0%
!!! ATTTGTTTTTTTTCTTGTCA+TGG + chr7_4:26800227-26800246 Msa1147510:intron 20.0%
!!! TTTTCAGATAAATTGCTTAT+AGG - chr7_4:26800866-26800885 None:intergenic 20.0%
!! TAAGCAATTTATCTGAAAAA+AGG + chr7_4:26800867-26800886 Msa1147510:CDS 20.0%
!! AAGCAATTTATCTGAAAAAA+GGG + chr7_4:26800868-26800887 Msa1147510:CDS 20.0%
!! TTAAAATCCTTATTACAAAG+AGG - chr7_4:26801081-26801100 None:intergenic 20.0%
!!! TTTTTTTTTTCCAAACATGA+TGG + chr7_4:26801145-26801164 Msa1147510:intron 20.0%
!! TTAAAATGGAAATTTAAAGG+GGG - chr7_4:26801220-26801239 None:intergenic 20.0%
!! GTTAAAATGGAAATTTAAAG+GGG - chr7_4:26801221-26801240 None:intergenic 20.0%
!! GGTTAAAATGGAAATTTAAA+GGG - chr7_4:26801222-26801241 None:intergenic 20.0%
!! TGGTTAAAATGGAAATTTAA+AGG - chr7_4:26801223-26801242 None:intergenic 20.0%
!! CATTGTTAATATAATCGATA+TGG - chr7_4:26801447-26801466 None:intergenic 20.0%
!! TTATATTAACAATGACAAGA+CGG + chr7_4:26801453-26801472 Msa1147510:intron 20.0%
!! AAATAATACACACCTAAATT+GGG - chr7_4:26801592-26801611 None:intergenic 20.0%
!! TAAATATATTAACACATAGC+CGG - chr7_4:26801647-26801666 None:intergenic 20.0%
!! TTCAATCTTTTCAACATGTT+GGG - chr7_4:26797150-26797169 None:intergenic 25.0%
! CTCTTATTGTTAATATCATC+TGG - chr7_4:26797245-26797264 None:intergenic 25.0%
! GATGATATTAACAATAAGAG+AGG + chr7_4:26797245-26797264 Msa1147510:CDS 25.0%
! ACATAAATAATGTGCAACAT+TGG - chr7_4:26797547-26797566 None:intergenic 25.0%
! ATGTTGCACATTATTTATGT+TGG + chr7_4:26797547-26797566 Msa1147510:intron 25.0%
!! AATAACTGATTTCCAAATGA+GGG - chr7_4:26797917-26797936 None:intergenic 25.0%
!! AAATAACTGATTTCCAAATG+AGG - chr7_4:26797918-26797937 None:intergenic 25.0%
!! CGTATTAGTTTCTTTCTTTA+TGG + chr7_4:26797960-26797979 Msa1147510:intron 25.0%
! TCAACTAAGAAATTAACTCT+AGG - chr7_4:26798017-26798036 None:intergenic 25.0%
!! AATAACTGATTTCCAAATGA+GGG - chr7_4:26797917-26797936 None:intergenic 25.0%
!! AAATAACTGATTTCCAAATG+AGG - chr7_4:26797918-26797937 None:intergenic 25.0%
!! CGTATTAGTTTCTTTCTTTA+TGG + chr7_4:26797960-26797979 Msa1147510:intron 25.0%
! TCAACTAAGAAATTAACTCT+AGG - chr7_4:26798017-26798036 None:intergenic 25.0%
!! AAAATATTGCAACACTTTTG+AGG + chr7_4:26798359-26798378 Msa1147510:CDS 25.0%
!! AAATATTGCAACACTTTTGA+GGG + chr7_4:26798360-26798379 Msa1147510:CDS 25.0%
! TTATTTAACGCTAAGTCAAA+AGG - chr7_4:26798399-26798418 None:intergenic 25.0%
!!! TTTCTAGCTTCCAATTAATT+AGG + chr7_4:26798710-26798729 Msa1147510:intron 25.0%
!! TACTATCTTAATTTTGTTGC+AGG + chr7_4:26798782-26798801 Msa1147510:intron 25.0%
! AGTATCTGATAAATAAGCTT+CGG + chr7_4:26798856-26798875 Msa1147510:CDS 25.0%
!! AAGATTGAACAAAAGTACAA+AGG - chr7_4:26799017-26799036 None:intergenic 25.0%
! GTGATGATATAGAAAATGTT+TGG - chr7_4:26799155-26799174 None:intergenic 25.0%
! TTTGTGTTTGTGTTAGAATT+TGG + chr7_4:26799217-26799236 Msa1147510:intron 25.0%
! TTGTGTTTGTGTTAGAATTT+GGG + chr7_4:26799218-26799237 Msa1147510:intron 25.0%
!! TACTATCAGATTTTCACTAT+CGG - chr7_4:26799388-26799407 None:intergenic 25.0%
!!! ATCTTATTAGAATTTTGGGT+TGG + chr7_4:26799440-26799459 Msa1147510:intron 25.0%
!!! CTTTACAAGTTGATTTTGTA+AGG - chr7_4:26799477-26799496 None:intergenic 25.0%
! CTTACAAAATCAACTTGTAA+AGG + chr7_4:26799475-26799494 Msa1147510:intron 25.0%
! ATAATGTTAAGAGTCTTGAT+TGG - chr7_4:26799547-26799566 None:intergenic 25.0%
! ATTAGAATACGACATATAAG+TGG - chr7_4:26799598-26799617 None:intergenic 25.0%
!!! CTAATATTCAATTTGGCTTT+AGG + chr7_4:26799613-26799632 Msa1147510:intron 25.0%
!! TTTAGGTTCATTTAATGGAA+GGG + chr7_4:26799630-26799649 Msa1147510:intron 25.0%
!!! TATTTTTTTGCTTTACCTGT+GGG - chr7_4:26799870-26799889 None:intergenic 25.0%
!!! ATATTTTTTTGCTTTACCTG+TGG - chr7_4:26799871-26799890 None:intergenic 25.0%
!! GAGTTTTCATACAATAACAT+TGG + chr7_4:26800183-26800202 Msa1147510:CDS 25.0%
! ATCCAAAAGTAAAACAATAC+CGG - chr7_4:26800209-26800228 None:intergenic 25.0%
! GAAAATATAATCATTTCCGT+TGG - chr7_4:26800687-26800706 None:intergenic 25.0%
!!! TCATTGAAATTTTTCAGAGA+CGG + chr7_4:26800822-26800841 Msa1147510:intron 25.0%
!!! AATTTCCATTTTAACCATGT+AGG + chr7_4:26801226-26801245 Msa1147510:intron 25.0%
!!! ATTTCCATTTTAACCATGTA+GGG + chr7_4:26801227-26801246 Msa1147510:intron 25.0%
! AATATAATCGATATGGATGA+CGG - chr7_4:26801440-26801459 None:intergenic 25.0%
!! TAGTTTGTGTTTATAGTTAC+TGG + chr7_4:26801545-26801564 Msa1147510:intron 25.0%
! AGTTTGTGTTTATAGTTACT+GGG + chr7_4:26801546-26801565 Msa1147510:intron 25.0%
! CAAATAATACACACCTAAAT+TGG - chr7_4:26801593-26801612 None:intergenic 25.0%
!!! GTTGGTTTTGTTGTTAAAAT+GGG + chr7_4:26801704-26801723 Msa1147510:intron 25.0%
! TCAAAATGTGGCAATTATAA+AGG - chr7_4:26801835-26801854 None:intergenic 25.0%
! TTGTGTAAAAAGTCAAAATG+TGG - chr7_4:26801847-26801866 None:intergenic 25.0%
! TCTCTGCAATAAATTACTAA+GGG + chr7_4:26801965-26801984 Msa1147510:intron 25.0%
! TGAAAAAGTGACAGTTATAA+AGG + chr7_4:26802061-26802080 Msa1147510:intron 25.0%
!! TTGGTATTTGCTAATTTAAC+AGG + chr7_4:26802173-26802192 Msa1147510:intron 25.0%
ATTGAATCTTAGAGTGATTC+TGG - chr7_4:26797091-26797110 None:intergenic 30.0%
TATAACATTTACAACAGCAG+CGG + chr7_4:26797110-26797129 Msa1147510:CDS 30.0%
! GTTCAATCTTTTCAACATGT+TGG - chr7_4:26797151-26797170 None:intergenic 30.0%
CATGTTGAAAAGATTGAACT+TGG + chr7_4:26797152-26797171 Msa1147510:CDS 30.0%
AAGTTTGGTATCAACATCAA+AGG + chr7_4:26797187-26797206 Msa1147510:CDS 30.0%
AATGATTCACTTGTCTTTGA+TGG + chr7_4:26797392-26797411 Msa1147510:CDS 30.0%
TAGAAAAAGTTTAGACGAGT+TGG + chr7_4:26797623-26797642 Msa1147510:intron 30.0%
! AAAATGTGTGACATTTTCCA+TGG - chr7_4:26797663-26797682 None:intergenic 30.0%
! TGATTTTATATCCCCTCATT+TGG + chr7_4:26797902-26797921 Msa1147510:intron 30.0%
! ATAACTGATTTCCAAATGAG+GGG - chr7_4:26797916-26797935 None:intergenic 30.0%
!!! AGTTTTTGGTTCTGAATTTC+TGG + chr7_4:26798073-26798092 Msa1147510:intron 30.0%
! ATAACTGATTTCCAAATGAG+GGG - chr7_4:26797916-26797935 None:intergenic 30.0%
!!! AGTTTTTGGTTCTGAATTTC+TGG + chr7_4:26798073-26798092 Msa1147510:intron 30.0%
!!! AGCTTTAGGGTTTAAGTTTT+AGG - chr7_4:26798464-26798483 None:intergenic 30.0%
!! GTTAAGATGTGTTTTTGTGT+GGG + chr7_4:26798528-26798547 Msa1147510:intron 30.0%
AAACCAAAATGCGAAATGTT+TGG + chr7_4:26798627-26798646 Msa1147510:intron 30.0%
ATCAAACATACCATCATAGT+GGG - chr7_4:26798663-26798682 None:intergenic 30.0%
GTATCTGATAAATAAGCTTC+GGG + chr7_4:26798857-26798876 Msa1147510:CDS 30.0%
! TCTTTTTACCACAACTTCTA+TGG + chr7_4:26799051-26799070 Msa1147510:intron 30.0%
! CTTTTTACCACAACTTCTAT+GGG + chr7_4:26799052-26799071 Msa1147510:intron 30.0%
! GTTTTTGCTAATGTTGAGTT+AGG - chr7_4:26799249-26799268 None:intergenic 30.0%
AAGGATATAAGACCTCAATA+TGG - chr7_4:26799307-26799326 None:intergenic 30.0%
TGTTAAGAATCTCACATTGA+AGG - chr7_4:26799326-26799345 None:intergenic 30.0%
! ACTATCAGATTTTCACTATC+GGG - chr7_4:26799387-26799406 None:intergenic 30.0%
GATAGTGAAAATCTGATAGT+AGG + chr7_4:26799387-26799406 Msa1147510:intron 30.0%
! AAGAGATAAAGCCTTATCAT+GGG - chr7_4:26799524-26799543 None:intergenic 30.0%
!! TTGGCTTTAGGTTCATTTAA+TGG + chr7_4:26799625-26799644 Msa1147510:intron 30.0%
! CTTTAGGTTCATTTAATGGA+AGG + chr7_4:26799629-26799648 Msa1147510:intron 30.0%
!! GATTTGTTGATAACATACCT+TGG - chr7_4:26799683-26799702 None:intergenic 30.0%
! TTCTTTAAGTTTGGTATGCA+AGG + chr7_4:26799776-26799795 Msa1147510:intron 30.0%
AAGGAAAAAGGGACATATAT+TGG - chr7_4:26799941-26799960 None:intergenic 30.0%
CATGCAGCGAAAAAAAAAAA+AGG - chr7_4:26799960-26799979 None:intergenic 30.0%
TGTTCTTGTGCTAATCATAA+TGG + chr7_4:26800156-26800175 Msa1147510:CDS 30.0%
TTTCATACAATAACATTGGC+CGG + chr7_4:26800187-26800206 Msa1147510:CDS 30.0%
! GAAACTTTGTTTCCACATTT+AGG - chr7_4:26800431-26800450 None:intergenic 30.0%
GATAAATTGCTTATAGGCAA+TGG - chr7_4:26800860-26800879 None:intergenic 30.0%
GTTTCAAGATTTATCAACCA+TGG + chr7_4:26800947-26800966 Msa1147510:CDS 30.0%
AGGTATTCCTCTTTGTAATA+AGG + chr7_4:26801071-26801090 Msa1147510:intron 30.0%
TTTACCCTACATGGTTAAAA+TGG - chr7_4:26801234-26801253 None:intergenic 30.0%
TGGATCTAACAACTTTATGT+TGG - chr7_4:26801303-26801322 None:intergenic 30.0%
AATAACAGTAATAAGACGGT+AGG + chr7_4:26801677-26801696 Msa1147510:intron 30.0%
!!! GGTTGGTTTTGTTGTTAAAA+TGG + chr7_4:26801703-26801722 Msa1147510:intron 30.0%
GTGAAATACATTTAGTGTCT+TGG - chr7_4:26801871-26801890 None:intergenic 30.0%
CTCTCTGCAATAAATTACTA+AGG + chr7_4:26801964-26801983 Msa1147510:intron 30.0%
!! TAAATTACTAAGGGCGTTAT+AGG + chr7_4:26801974-26801993 Msa1147510:intron 30.0%
AAGTGACAGTTATAAAGGAA+CGG + chr7_4:26802066-26802085 Msa1147510:intron 30.0%
AAGGAAGTTATCGTCAATAA+GGG - chr7_4:26802130-26802149 None:intergenic 30.0%
! TACTAAGAGTTCTGACAATG+AGG + chr7_4:26797031-26797050 Msa1147510:CDS 35.0%
GATTGAACTTGGAAGTAAAG+AGG + chr7_4:26797163-26797182 Msa1147510:CDS 35.0%
TGGAAGTAAAGAGGAAAGTT+TGG + chr7_4:26797172-26797191 Msa1147510:CDS 35.0%
TCTTCTCAAAGAGTTGAACT+TGG - chr7_4:26797309-26797328 None:intergenic 35.0%
! TCTCATTCAAGTTCAAGAAG+TGG + chr7_4:26797338-26797357 Msa1147510:CDS 35.0%
!! TCTTTGATGGACTTGACTTT+AGG + chr7_4:26797405-26797424 Msa1147510:CDS 35.0%
!! CTTTGATGGACTTGACTTTA+GGG + chr7_4:26797406-26797425 Msa1147510:CDS 35.0%
!! TTTGATGGACTTGACTTTAG+GGG + chr7_4:26797407-26797426 Msa1147510:CDS 35.0%
!! AGACGAGTTGGATTTTAGAT+TGG + chr7_4:26797635-26797654 Msa1147510:intron 35.0%
!!! GGGTTTAAGTTTTAGGACTA+AGG - chr7_4:26798457-26798476 None:intergenic 35.0%
!! GGTTAAGATGTGTTTTTGTG+TGG + chr7_4:26798527-26798546 Msa1147510:intron 35.0%
! AGACCAAACATTTCGCATTT+TGG - chr7_4:26798633-26798652 None:intergenic 35.0%
! TCTTCATTTTCCCACTATGA+TGG + chr7_4:26798650-26798669 Msa1147510:intron 35.0%
CATCAAACATACCATCATAG+TGG - chr7_4:26798664-26798683 None:intergenic 35.0%
AAGATAGTATCATGAGGCTA+GGG - chr7_4:26798771-26798790 None:intergenic 35.0%
TAAGATAGTATCATGAGGCT+AGG - chr7_4:26798772-26798791 None:intergenic 35.0%
TTGTTGCAGGTAGAGAAAAA+TGG + chr7_4:26798795-26798814 Msa1147510:intron 35.0%
!! ATTGATAACGAATACGTTCC+TGG + chr7_4:26798819-26798838 Msa1147510:CDS 35.0%
ATTCATTCCCATAGAAGTTG+TGG - chr7_4:26799062-26799081 None:intergenic 35.0%
! GGAGAAGGTTTTCATTTTCA+TGG + chr7_4:26799189-26799208 Msa1147510:intron 35.0%
TCACTTGTATAGCCATATTG+AGG + chr7_4:26799292-26799311 Msa1147510:intron 35.0%
ACACTTCAAATGTCCAATCA+TGG - chr7_4:26799362-26799381 None:intergenic 35.0%
AGTGAAAATCTGATAGTAGG+CGG + chr7_4:26799390-26799409 Msa1147510:intron 35.0%
TATCATGGGTTTATAGGTGA+TGG - chr7_4:26799510-26799529 None:intergenic 35.0%
TCACCTATAAACCCATGATA+AGG + chr7_4:26799510-26799529 Msa1147510:intron 35.0%
! AAGCCTTATCATGGGTTTAT+AGG - chr7_4:26799516-26799535 None:intergenic 35.0%
! GAAGAGATAAAGCCTTATCA+TGG - chr7_4:26799525-26799544 None:intergenic 35.0%
AAACTCTTTCTTCTTCTCCA+AGG + chr7_4:26799663-26799682 Msa1147510:CDS 35.0%
TGGAGGATCATCAAAATCAT+TGG - chr7_4:26799841-26799860 None:intergenic 35.0%
!! TTTTCGCTGCATGCTTTATT+TGG + chr7_4:26799967-26799986 Msa1147510:intron 35.0%
ATTAGCACAAGAACATCGTT+TGG - chr7_4:26800151-26800170 None:intergenic 35.0%
TGGAAACAAAGTTTCTCAAC+AGG + chr7_4:26800436-26800455 Msa1147510:CDS 35.0%
GGAAACAAAGTTTCTCAACA+GGG + chr7_4:26800437-26800456 Msa1147510:CDS 35.0%
ATTGTAGAATGACCTCAAGT+CGG - chr7_4:26800472-26800491 None:intergenic 35.0%
AAACTACCTTTCTCTTACAC+AGG + chr7_4:26800547-26800566 Msa1147510:intron 35.0%
GATAAACCTGTGTAAGAGAA+AGG - chr7_4:26800556-26800575 None:intergenic 35.0%
GATTGTTTGCACACAATCAA+TGG + chr7_4:26800713-26800732 Msa1147510:CDS 35.0%
!! TGAAATTTTTCAGAGACGGT+TGG + chr7_4:26800826-26800845 Msa1147510:intron 35.0%
!! GAAATTTTTCAGAGACGGTT+GGG + chr7_4:26800827-26800846 Msa1147510:intron 35.0%
TGAAAAAAGGGACGAGTTAA+TGG + chr7_4:26800880-26800899 Msa1147510:CDS 35.0%
ACACATTGTACAAAGAGGTT+TGG - chr7_4:26800980-26800999 None:intergenic 35.0%
TGAGAACACATTGTACAAAG+AGG - chr7_4:26800985-26801004 None:intergenic 35.0%
ACAAAGAGGAATACCTGATA+GGG - chr7_4:26801067-26801086 None:intergenic 35.0%
TACAAAGAGGAATACCTGAT+AGG - chr7_4:26801068-26801087 None:intergenic 35.0%
CAATAACACACCATCATGTT+TGG - chr7_4:26801158-26801177 None:intergenic 35.0%
! CAAACATGATGGTGTGTTAT+TGG + chr7_4:26801156-26801175 Msa1147510:intron 35.0%
!!! GATGGTGTGTTATTGGTTTT+AGG + chr7_4:26801163-26801182 Msa1147510:intron 35.0%
AAATGGAAATTTAAAGGGGG+AGG - chr7_4:26801217-26801236 None:intergenic 35.0%
! TTCTAACACTCGCTTTGTTA+CGG - chr7_4:26801338-26801357 None:intergenic 35.0%
TGAAATAGACCTTGTATCGA+CGG + chr7_4:26801408-26801427 Msa1147510:intron 35.0%
GGCAATTATAAAGGAACAGA+GGG - chr7_4:26801826-26801845 None:intergenic 35.0%
TGGCAATTATAAAGGAACAG+AGG - chr7_4:26801827-26801846 None:intergenic 35.0%
GAAGGAAGTTATCGTCAATA+AGG - chr7_4:26802131-26802150 None:intergenic 35.0%
ATTGACGATAACTTCCTTCA+TGG + chr7_4:26802132-26802151 Msa1147510:intron 35.0%
AAACAGCTTCAATGTCATTG+TGG + chr7_4:26802255-26802274 Msa1147510:CDS 35.0%
TTCTGACAATGAGGCTATGA+TGG + chr7_4:26797040-26797059 Msa1147510:CDS 40.0%
AGTCTTGAACTCACTCTTGT+TGG - chr7_4:26797068-26797087 None:intergenic 40.0%
CTTGAACTTGAATGAGAGCA+AGG - chr7_4:26797335-26797354 None:intergenic 40.0%
TGTCCTTGAGAGAAACATCT+AGG + chr7_4:26797435-26797454 Msa1147510:CDS 40.0%
GTCCTTGAGAGAAACATCTA+GGG + chr7_4:26797436-26797455 Msa1147510:CDS 40.0%
AACCCTAGATGTTTCTCTCA+AGG - chr7_4:26797441-26797460 None:intergenic 40.0%
TTGTATCACACACCTTAGCA+AGG - chr7_4:26797478-26797497 None:intergenic 40.0%
GCTAAGGTGTGTGATACAAT+TGG + chr7_4:26797479-26797498 Msa1147510:intron 40.0%
AGGTGTGTGATACAATTGGT+TGG + chr7_4:26797483-26797502 Msa1147510:intron 40.0%
! TGGATTTTAGATTGGAGCCA+TGG + chr7_4:26797643-26797662 Msa1147510:intron 40.0%
TGTAACAACTTCCCCTCATT+TGG + chr7_4:26798099-26798118 Msa1147510:intron 40.0%
GTAACAACTTCATTTGCAGC+AGG + chr7_4:26798297-26798316 Msa1147510:intron 40.0%
AGCAAGAATCGACACAAGAT+AGG + chr7_4:26798334-26798353 Msa1147510:CDS 40.0%
GCAAGAATCGACACAAGATA+GGG + chr7_4:26798335-26798354 Msa1147510:CDS 40.0%
TACTTCGAAGTAGTGATTCC+AGG - chr7_4:26798840-26798859 None:intergenic 40.0%
TGCTAAAGTGGGAACATACA+AGG + chr7_4:26798884-26798903 Msa1147510:CDS 40.0%
! CATGATAGTGTGATGTTACG+TGG + chr7_4:26799126-26799145 Msa1147510:intron 40.0%
TCATCACCGCATGATAGTAA+TGG + chr7_4:26799168-26799187 Msa1147510:intron 40.0%
CCTTCTCCATTACTATCATG+CGG - chr7_4:26799177-26799196 None:intergenic 40.0%
GTATGCAAGGACATTAGCAA+TGG + chr7_4:26799789-26799808 Msa1147510:CDS 40.0%
CTAGATGGAACTTCAATGCT+TGG - chr7_4:26800093-26800112 None:intergenic 40.0%
!! GGCCGGTATTGTTTTACTTT+TGG + chr7_4:26800204-26800223 Msa1147510:intron 40.0%
GTTTATCGTACTCCCAAGAA+AGG + chr7_4:26800569-26800588 Msa1147510:CDS 40.0%
ACACCAATATACTCGACAAC+TGG - chr7_4:26800635-26800654 None:intergenic 40.0%
CACACAATCAATGGTGTAGA+TGG + chr7_4:26800722-26800741 Msa1147510:CDS 40.0%
CCAGCATCTATGCAATATTC+AGG - chr7_4:26800914-26800933 None:intergenic 40.0%
CCTGAATATTGCATAGATGC+TGG + chr7_4:26800911-26800930 Msa1147510:CDS 40.0%
!!! TGCATAGATGCTGGTTCTTT+TGG + chr7_4:26800920-26800939 Msa1147510:CDS 40.0%
!!! CTCACTGTTTTTACCCTACA+TGG - chr7_4:26801243-26801262 None:intergenic 40.0%
! TCTAACACTCGCTTTGTTAC+GGG - chr7_4:26801337-26801356 None:intergenic 40.0%
ACAATGACAAGACGGTGTTT+CGG + chr7_4:26801461-26801480 Msa1147510:intron 40.0%
!! TCCTTAAGGGTGGTTGTTTT+TGG + chr7_4:26801485-26801504 Msa1147510:intron 40.0%
!!! CCTTAAGGGTGGTTGTTTTT+GGG + chr7_4:26801486-26801505 Msa1147510:intron 40.0%
! AATTGGGCACCGTATAAAGA+CGG - chr7_4:26801576-26801595 None:intergenic 40.0%
CTTTATACGGTGCCCAATTT+AGG + chr7_4:26801577-26801596 Msa1147510:intron 40.0%
!!! TTGTTACCATCGCTAGCTTT+TGG + chr7_4:26801610-26801629 Msa1147510:intron 40.0%
CAGTAATAAGACGGTAGGTA+TGG + chr7_4:26801682-26801701 Msa1147510:intron 40.0%
AATAAGACGGTAGGTATGGT+TGG + chr7_4:26801686-26801705 Msa1147510:intron 40.0%
TTCCATGTCATCTTCTGAAC+TGG + chr7_4:26801776-26801795 Msa1147510:intron 40.0%
AACCAGTTCAGAAGATGACA+TGG - chr7_4:26801781-26801800 None:intergenic 40.0%
TGACAGTTATAAAGGAACGG+AGG + chr7_4:26802069-26802088 Msa1147510:intron 40.0%
GACAGTTATAAAGGAACGGA+GGG + chr7_4:26802070-26802089 Msa1147510:intron 40.0%
GAAGTTATCGTCAATAAGGG+AGG - chr7_4:26802127-26802146 None:intergenic 40.0%
GAGTGTGTAACCATAGTCAT+AGG - chr7_4:26802205-26802224 None:intergenic 40.0%
GATAGTGTGTCTGATTCTGA+TGG + chr7_4:26802225-26802244 Msa1147510:CDS 40.0%
TCAATGTCATTGTGGTGCAA+AGG + chr7_4:26802263-26802282 Msa1147510:CDS 40.0%
CTTAGCAAGGCAACGAAGAT+TGG - chr7_4:26797465-26797484 None:intergenic 45.0%
CAATCTTCGTTGCCTTGCTA+AGG + chr7_4:26797463-26797482 Msa1147510:CDS 45.0%
!! CTTCGGGAACTTGCTAAAGT+GGG + chr7_4:26798873-26798892 Msa1147510:CDS 45.0%
! CCGCATGATAGTAATGGAGA+AGG + chr7_4:26799174-26799193 Msa1147510:intron 45.0%
AAAATCTGATAGTAGGCGGC+TGG + chr7_4:26799394-26799413 Msa1147510:intron 45.0%
TGAAGTTCCATCTAGTGCTG+CGG + chr7_4:26800098-26800117 Msa1147510:CDS 45.0%
ATCGTACTCCCAAGAAAGGT+TGG + chr7_4:26800573-26800592 Msa1147510:CDS 45.0%
TCGTACTCCCAAGAAAGGTT+GGG + chr7_4:26800574-26800593 Msa1147510:CDS 45.0%
ACATGGGACTTTATCCCATC+AGG + chr7_4:26800605-26800624 Msa1147510:CDS 45.0%
GCACCAGTTGTCGAGTATAT+TGG + chr7_4:26800629-26800648 Msa1147510:CDS 45.0%
CTAAGTAGAGACGATGAGCT+AGG + chr7_4:26800656-26800675 Msa1147510:CDS 45.0%
CAATGGTGTAGATGGAAGAG+AGG + chr7_4:26800730-26800749 Msa1147510:CDS 45.0%
! AGAGGTTTGGTTCACATCCA+TGG - chr7_4:26800967-26800986 None:intergenic 45.0%
! GAGTTAGTCTAGGATCTCTG+TGG - chr7_4:26801012-26801031 None:intergenic 45.0%
! AGCACTACACGAGTTAGTCT+AGG - chr7_4:26801022-26801041 None:intergenic 45.0%
AGAAGACATACCTCCCTATC+AGG + chr7_4:26801051-26801070 Msa1147510:CDS 45.0%
AAGAGGAATACCTGATAGGG+AGG - chr7_4:26801064-26801083 None:intergenic 45.0%
TGTTACGGGGGAAATACATC+TGG - chr7_4:26801323-26801342 None:intergenic 45.0%
! TAACACTCGCTTTGTTACGG+GGG - chr7_4:26801335-26801354 None:intergenic 45.0%
! CTAACACTCGCTTTGTTACG+GGG - chr7_4:26801336-26801355 None:intergenic 45.0%
ACGGTGTTTCGGTTCCTTAA+GGG + chr7_4:26801472-26801491 Msa1147510:intron 45.0%
CCCAAAAACAACCACCCTTA+AGG - chr7_4:26801489-26801508 None:intergenic 45.0%
!!! AAGGGTGGTTGTTTTTGGGT+TGG + chr7_4:26801490-26801509 Msa1147510:intron 45.0%
!!! GGTTGTTTTTGGGTTGGCTT+CGG + chr7_4:26801496-26801515 Msa1147510:intron 45.0%
CTGGGTGTTCCGTCTTTATA+CGG + chr7_4:26801564-26801583 Msa1147510:intron 45.0%
CAGGAACTCACCTATGACTA+TGG + chr7_4:26802192-26802211 Msa1147510:intron 45.0%
!! AATATGATATTAAATAATTA+AGG - chr7_4:26801932-26801951 None:intergenic 5.0%
!! GCTTCGGGAACTTGCTAAAG+TGG + chr7_4:26798872-26798891 Msa1147510:CDS 50.0%
GTCCAATCATGGACGTGAGA+GGG - chr7_4:26799351-26799370 None:intergenic 50.0%
TGTCCAATCATGGACGTGAG+AGG - chr7_4:26799352-26799371 None:intergenic 50.0%
GTAGGCGGCTGGATGAATAT+TGG + chr7_4:26799405-26799424 Msa1147510:intron 50.0%
GAAGTTCCATCTAGTGCTGC+GGG + chr7_4:26800099-26800118 Msa1147510:CDS 50.0%
CATTCGACCACGATGTCTAG+AGG - chr7_4:26800386-26800405 None:intergenic 50.0%
CTAGACATCGTGGTCGAATG+TGG + chr7_4:26800386-26800405 Msa1147510:CDS 50.0%
TTAGGTCCGCATCCACATTG+CGG - chr7_4:26800413-26800432 None:intergenic 50.0%
TGTGGATGCGGACCTAAATG+TGG + chr7_4:26800416-26800435 Msa1147510:CDS 50.0%
!! GGGCTTAACTTACCGACTTG+AGG + chr7_4:26800457-26800476 Msa1147510:CDS 50.0%
TACTCCCAAGAAAGGTTGGG+CGG + chr7_4:26800577-26800596 Msa1147510:CDS 50.0%
CTTACCGCCCAACCTTTCTT+GGG - chr7_4:26800584-26800603 None:intergenic 50.0%
TCTTACCGCCCAACCTTTCT+TGG - chr7_4:26800585-26800604 None:intergenic 50.0%
AAGGTTGGGCGGTAAGAACA+TGG + chr7_4:26800588-26800607 Msa1147510:CDS 50.0%
AGGTTGGGCGGTAAGAACAT+GGG + chr7_4:26800589-26800608 Msa1147510:CDS 50.0%
!! GATGAGCTAGGAAGTGCCAA+CGG + chr7_4:26800668-26800687 Msa1147510:CDS 50.0%
! CGGTAAGTACCGTCGATACA+AGG - chr7_4:26801420-26801439 None:intergenic 50.0%
GACGGTGTTTCGGTTCCTTA+AGG + chr7_4:26801471-26801490 Msa1147510:intron 50.0%
GTGTTTCGGTTCCTTAAGGG+TGG + chr7_4:26801475-26801494 Msa1147510:intron 50.0%
CACCCTCTCACGTCCATGAT+TGG + chr7_4:26799346-26799365 Msa1147510:intron 55.0%
TTACCTGTGGGTGCAACTGG+AGG - chr7_4:26799858-26799877 None:intergenic 55.0%
GCTTTACCTGTGGGTGCAAC+TGG - chr7_4:26799861-26799880 None:intergenic 55.0%
TTGCATCCCGCAGCACTAGA+TGG - chr7_4:26800108-26800127 None:intergenic 55.0%
TGCTGCGGGATGCAATTGCA+AGG + chr7_4:26800113-26800132 Msa1147510:CDS 55.0%
GCTGCGGGATGCAATTGCAA+GGG + chr7_4:26800114-26800133 Msa1147510:CDS 55.0%
GATCGAGCCTCTAGACATCG+TGG + chr7_4:26800376-26800395 Msa1147510:CDS 55.0%
GTCGAATGTGGACCGCAATG+TGG + chr7_4:26800398-26800417 Msa1147510:CDS 55.0%
TGTGGACCGCAATGTGGATG+CGG + chr7_4:26800404-26800423 Msa1147510:CDS 55.0%
CGACAACTGGTGCACCTGAT+GGG - chr7_4:26800622-26800641 None:intergenic 55.0%
TCGACAACTGGTGCACCTGA+TGG - chr7_4:26800623-26800642 None:intergenic 55.0%
GACGAGCCAAAAGCTAGCGA+TGG - chr7_4:26801619-26801638 None:intergenic 55.0%
!!! GCTTTTGGCTCGTCTTGTGC+CGG + chr7_4:26801625-26801644 Msa1147510:intron 55.0%
GATCCTCCAGTTGCACCCAC+AGG + chr7_4:26799852-26799871 Msa1147510:CDS 60.0%
!! GGGTTGGCTTCGGTGCTTAG+TGG + chr7_4:26801506-26801525 Msa1147510:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 26797023 26802308 26797023 ID=Msa1147510;Name=Msa1147510
chr7_4 mRNA 26797023 26802308 26797023 ID=Msa1147510-mRNA-1;Parent=Msa1147510;Name=Msa1147510-mRNA-1;_AED=0.09;_eAED=0.11;_QI=0|0|0|1|1|1|10|0|521
chr7_4 exon 26797023 26797484 26797023 ID=Msa1147510-mRNA-1:exon:6561;Parent=Msa1147510-mRNA-1
chr7_4 exon 26798316 26798390 26798316 ID=Msa1147510-mRNA-1:exon:6562;Parent=Msa1147510-mRNA-1
chr7_4 exon 26798804 26798905 26798804 ID=Msa1147510-mRNA-1:exon:6563;Parent=Msa1147510-mRNA-1
chr7_4 exon 26799635 26799684 26799635 ID=Msa1147510-mRNA-1:exon:6564;Parent=Msa1147510-mRNA-1
chr7_4 exon 26799785 26799873 26799785 ID=Msa1147510-mRNA-1:exon:6565;Parent=Msa1147510-mRNA-1
chr7_4 exon 26800058 26800208 26800058 ID=Msa1147510-mRNA-1:exon:6566;Parent=Msa1147510-mRNA-1
chr7_4 exon 26800373 26800478 26800373 ID=Msa1147510-mRNA-1:exon:6567;Parent=Msa1147510-mRNA-1
chr7_4 exon 26800569 26800751 26800569 ID=Msa1147510-mRNA-1:exon:6568;Parent=Msa1147510-mRNA-1
chr7_4 exon 26800839 26801072 26800839 ID=Msa1147510-mRNA-1:exon:6569;Parent=Msa1147510-mRNA-1
chr7_4 exon 26802195 26802308 26802195 ID=Msa1147510-mRNA-1:exon:6570;Parent=Msa1147510-mRNA-1
chr7_4 CDS 26797023 26797484 26797023 ID=Msa1147510-mRNA-1:cds;Parent=Msa1147510-mRNA-1
chr7_4 CDS 26798316 26798390 26798316 ID=Msa1147510-mRNA-1:cds;Parent=Msa1147510-mRNA-1
chr7_4 CDS 26798804 26798905 26798804 ID=Msa1147510-mRNA-1:cds;Parent=Msa1147510-mRNA-1
chr7_4 CDS 26799635 26799684 26799635 ID=Msa1147510-mRNA-1:cds;Parent=Msa1147510-mRNA-1
chr7_4 CDS 26799785 26799873 26799785 ID=Msa1147510-mRNA-1:cds;Parent=Msa1147510-mRNA-1
chr7_4 CDS 26800058 26800208 26800058 ID=Msa1147510-mRNA-1:cds;Parent=Msa1147510-mRNA-1
chr7_4 CDS 26800373 26800478 26800373 ID=Msa1147510-mRNA-1:cds;Parent=Msa1147510-mRNA-1
chr7_4 CDS 26800569 26800751 26800569 ID=Msa1147510-mRNA-1:cds;Parent=Msa1147510-mRNA-1
chr7_4 CDS 26800839 26801072 26800839 ID=Msa1147510-mRNA-1:cds;Parent=Msa1147510-mRNA-1
chr7_4 CDS 26802195 26802308 26802195 ID=Msa1147510-mRNA-1:cds;Parent=Msa1147510-mRNA-1
Gene Sequence

>Msa1147510

ATGGAGGCTACTAAGAGTTCTGACAATGAGGCTATGATGGTACCAACAAGAGTGAGTTCAAGACTCCAGAATCACTCTAAGATTCAATATAACATTTACAACAGCAGCGGCGACAAAGTATTTGCCCAACATGTTGAAAAGATTGAACTTGGAAGTAAAGAGGAAAGTTTGGTATCAACATCAAAGGTTTGTTCACAACTTCAAAATCGAAACGAAATTCCAGATGATATTAACAATAAGAGAGGCATGATCAGTATTGAAGACAATATTGTCGAGAAGAGAACCAAGTTCAACTCTTTGAGAAGAAAACCTTGCTCTCATTCAAGTTCAAGAAGTGGTTCAAGAATCTCTCGTTCAAGATCAACAAGCAATGATTCACTTGTCTTTGATGGACTTGACTTTAGGGGCATTTTGTCCTTGAGAGAAACATCTAGGGTTGCCAATCTTCGTTGCCTTGCTAAGCAGGAAGAGAAGAATCAAAGCAAGAATCGACACAAGATAGGGAAAAATATTGCAACACTTTTGAGGGCAAGCAATGTAGAGAAAAATGGCATTGATAACGAATACGTTCCTGGAATCACTACTTCGAAGTATCTGATAAATAAGCTTCGGGAACTTGCTAAAGTGGGAACATACAAGGTTCATTTAATGGAAGGGCAAGTCTCTAAAACTCTTTCTTCTTCTCCAAGTTTGGTATGCAAGGACATTAGCAATGGACAAGAAGCTATCAGCATTATTGCAACCAATGATTTTGATGATCCTCCAGTTGCACCCACAGGTTTTGAATACATTACATCAAACAAATTTTCACCAAGCATTGAAGTTCCATCTAGTGCTGCGGGATGCAATTGCAAGGGAAGTTGTAGAACCAAACGATGTTCTTGTGCTAATCATAATGGCTCCGAGTTTTCATACAATAACATTGGCCGATTGATCGAGCCTCTAGACATCGTGGTCGAATGTGGACCGCAATGTGGATGCGGACCTAAATGTGGAAACAAAGTTTCTCAACAGGGCTTAACTTACCGACTTGAGGTTTATCGTACTCCCAAGAAAGGTTGGGCGGTAAGAACATGGGACTTTATCCCATCAGGTGCACCAGTTGTCGAGTATATTGGTGTACTAAGTAGAGACGATGAGCTAGGAAGTGCCAACGGAAATGATTATATTTTCGATATTGATTGTTTGCACACAATCAATGGTGTAGATGGAAGAGAGAGACGGTTGGGTAATGTACCATTGCCTATAAGCAATTTATCTGAAAAAAGGGACGAGTTAATGGAAAAAGATCCTGAATATTGCATAGATGCTGGTTCTTTTGGAAATGTTTCAAGATTTATCAACCATGGATGTGAACCAAACCTCTTTGTACAATGTGTTCTCAGCAGCCACAGAGATCCTAGACTAACTCGTGTAGTGCTATTTGCAGCAGAAGACATACCTCCCTATCAGGAACTCACCTATGACTATGGTTACACACTCGATAGTGTGTCTGATTCTGATGGAAAAATCAAACAGCTTCAATGTCATTGTGGTGCAAAGGAATGTCGTAAGCGCTTGTACTAG
Protein sequence

>Msa1147510

MEATKSSDNEAMMVPTRVSSRLQNHSKIQYNIYNSSGDKVFAQHVEKIELGSKEESLVSTSKVCSQLQNRNEIPDDINNKRGMISIEDNIVEKRTKFNSLRRKPCSHSSSRSGSRISRSRSTSNDSLVFDGLDFRGILSLRETSRVANLRCLAKQEEKNQSKNRHKIGKNIATLLRASNVEKNGIDNEYVPGITTSKYLINKLRELAKVGTYKVHLMEGQVSKTLSSSPSLVCKDISNGQEAISIIATNDFDDPPVAPTGFEYITSNKFSPSIEVPSSAAGCNCKGSCRTKRCSCANHNGSEFSYNNIGRLIEPLDIVVECGPQCGCGPKCGNKVSQQGLTYRLEVYRTPKKGWAVRTWDFIPSGAPVVEYIGVLSRDDELGSANGNDYIFDIDCLHTINGVDGRERRLGNVPLPISNLSEKRDELMEKDPEYCIDAGSFGNVSRFINHGCEPNLFVQCVLSSHRDPRLTRVVLFAAEDIPPYQELTYDYGYTLDSVSDSDGKIKQLQCHCGAKECRKRLY*