Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1149150 | XP_039685680.1 | 83.104 | 799 | 115 | 3 | 1 | 779 | 1 | 799 | 0.0 | 1361 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1149150 | sp|Q9SZL8|FRS5_ARATH | 27.201 | 636 | 393 | 13 | 32 | 665 | 70 | 637 | 2.84e-65 | 236 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1149150 | D3YBB9 | 75.093 | 807 | 184 | 4 | 1 | 798 | 49 | 847 | 0.0 | 1262 |
Gene ID | Type | Classification |
---|---|---|
Msa1149150 | TF | FAR1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1149150 | MtrunA17_Chr3g0088371 | 80.978 | 184 | 32 | 1 | 618 | 798 | 1 | 184 | 8.33e-101 | 309 |
Msa1149150 | MtrunA17_Chr2g0324011 | 30.236 | 635 | 367 | 13 | 36 | 665 | 8 | 571 | 6.31e-96 | 311 |
Msa1149150 | MtrunA17_Chr3g0082121 | 31.259 | 691 | 387 | 17 | 41 | 727 | 49 | 655 | 5.59e-94 | 309 |
Msa1149150 | MtrunA17_Chr1g0202341 | 28.819 | 635 | 371 | 17 | 34 | 662 | 50 | 609 | 2.25e-74 | 256 |
Msa1149150 | MtrunA17_Chr8g0363841 | 28.526 | 631 | 374 | 16 | 40 | 665 | 22 | 580 | 5.18e-69 | 241 |
Msa1149150 | MtrunA17_Chr1g0203721 | 26.454 | 722 | 431 | 19 | 40 | 739 | 68 | 711 | 1.75e-68 | 243 |
Msa1149150 | MtrunA17_Chr2g0296781 | 27.246 | 679 | 408 | 20 | 39 | 708 | 1 | 602 | 1.12e-65 | 233 |
Msa1149150 | MtrunA17_Chr5g0448761 | 26.780 | 646 | 389 | 14 | 31 | 665 | 56 | 628 | 1.39e-64 | 230 |
Msa1149150 | MtrunA17_Chr6g0458391 | 26.741 | 632 | 356 | 15 | 41 | 662 | 231 | 765 | 1.56e-61 | 221 |
Msa1149150 | MtrunA17_Chr1g0164591 | 35.093 | 322 | 194 | 4 | 131 | 450 | 1 | 309 | 4.03e-61 | 209 |
Msa1149150 | MtrunA17_Chr6g0477261 | 28.273 | 527 | 320 | 14 | 180 | 699 | 7 | 482 | 1.22e-58 | 211 |
Msa1149150 | MtrunA17_Chr2g0287651 | 25.437 | 629 | 389 | 13 | 39 | 662 | 79 | 632 | 9.78e-56 | 206 |
Msa1149150 | MtrunA17_Chr1g0172971 | 81.197 | 117 | 21 | 1 | 1 | 116 | 1 | 117 | 2.13e-53 | 194 |
Msa1149150 | MtrunA17_Chr1g0196541 | 25.637 | 628 | 391 | 18 | 39 | 662 | 1 | 556 | 8.94e-53 | 196 |
Msa1149150 | MtrunA17_Chr5g0441581 | 25.350 | 643 | 383 | 17 | 32 | 662 | 26 | 583 | 3.03e-52 | 194 |
Msa1149150 | MtrunA17_Chr7g0258861 | 34.967 | 306 | 175 | 6 | 36 | 336 | 8 | 294 | 7.19e-52 | 183 |
Msa1149150 | MtrunA17_Chr2g0329031 | 25.466 | 644 | 384 | 19 | 23 | 658 | 2 | 557 | 1.02e-49 | 187 |
Msa1149150 | MtrunA17_Chr5g0440451 | 23.904 | 707 | 433 | 17 | 34 | 721 | 42 | 662 | 2.40e-49 | 187 |
Msa1149150 | MtrunA17_Chr1g0198761 | 26.187 | 653 | 384 | 19 | 26 | 660 | 38 | 610 | 2.46e-49 | 186 |
Msa1149150 | MtrunA17_Chr1g0207551 | 24.177 | 699 | 432 | 18 | 31 | 718 | 30 | 641 | 2.75e-49 | 186 |
Msa1149150 | MtrunA17_Chr3g0118611 | 26.640 | 503 | 309 | 10 | 221 | 719 | 111 | 557 | 2.57e-46 | 177 |
Msa1149150 | MtrunA17_Chr3g0080351 | 24.000 | 725 | 447 | 18 | 34 | 752 | 75 | 701 | 2.66e-45 | 175 |
Msa1149150 | MtrunA17_Chr2g0287061 | 24.071 | 673 | 385 | 20 | 41 | 708 | 189 | 740 | 1.93e-44 | 172 |
Msa1149150 | MtrunA17_Chr2g0290391 | 25.273 | 641 | 378 | 19 | 38 | 660 | 54 | 611 | 3.13e-44 | 170 |
Msa1149150 | MtrunA17_Chr1g0203051 | 22.712 | 590 | 387 | 9 | 50 | 637 | 94 | 616 | 1.34e-43 | 167 |
Msa1149150 | MtrunA17_Chr2g0276841 | 25.354 | 635 | 378 | 21 | 49 | 669 | 84 | 636 | 5.99e-42 | 163 |
Msa1149150 | MtrunA17_Chr6g0475591 | 93.151 | 73 | 5 | 0 | 188 | 260 | 1 | 73 | 5.75e-41 | 144 |
Msa1149150 | MtrunA17_Chr2g0291581 | 22.576 | 629 | 402 | 13 | 38 | 662 | 74 | 621 | 7.93e-40 | 157 |
Msa1149150 | MtrunA17_Chr2g0291591 | 25.845 | 503 | 309 | 14 | 16 | 499 | 44 | 501 | 3.28e-39 | 153 |
Msa1149150 | MtrunA17_Chr5g0431001 | 27.051 | 451 | 284 | 12 | 40 | 473 | 66 | 488 | 4.31e-39 | 152 |
Msa1149150 | MtrunA17_Chr5g0448511 | 24.336 | 452 | 288 | 10 | 216 | 665 | 1 | 400 | 5.99e-39 | 152 |
Msa1149150 | MtrunA17_Chr2g0294841 | 27.093 | 454 | 294 | 13 | 41 | 482 | 51 | 479 | 9.62e-33 | 135 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1149150 | AT4G38180.1 | 27.201 | 636 | 393 | 13 | 32 | 665 | 70 | 637 | 2.88e-66 | 236 |
Msa1149150 | AT4G15090.1 | 24.892 | 695 | 437 | 15 | 50 | 741 | 66 | 678 | 3.89e-55 | 204 |
Msa1149150 | AT4G15090.5 | 24.892 | 695 | 437 | 15 | 50 | 741 | 66 | 678 | 3.89e-55 | 204 |
Msa1149150 | AT4G15090.3 | 24.892 | 695 | 437 | 15 | 50 | 741 | 66 | 678 | 3.89e-55 | 204 |
Msa1149150 | AT4G15090.2 | 24.892 | 695 | 437 | 15 | 50 | 741 | 66 | 678 | 3.89e-55 | 204 |
Msa1149150 | AT4G15090.4 | 24.892 | 695 | 437 | 15 | 50 | 741 | 66 | 678 | 3.89e-55 | 204 |
Msa1149150 | AT2G27110.2 | 25.293 | 597 | 372 | 14 | 127 | 719 | 108 | 634 | 1.48e-47 | 182 |
Msa1149150 | AT2G27110.1 | 25.293 | 597 | 372 | 14 | 127 | 719 | 108 | 634 | 1.48e-47 | 182 |
Msa1149150 | AT3G06250.2 | 24.349 | 653 | 366 | 17 | 34 | 681 | 189 | 718 | 1.61e-47 | 181 |
Msa1149150 | AT3G06250.1 | 24.349 | 653 | 366 | 17 | 34 | 681 | 189 | 718 | 1.61e-47 | 181 |
Msa1149150 | AT3G06250.3 | 24.349 | 653 | 366 | 17 | 34 | 681 | 189 | 718 | 1.61e-47 | 181 |
Msa1149150 | AT2G27110.3 | 26.326 | 509 | 318 | 10 | 213 | 719 | 36 | 489 | 2.58e-47 | 180 |
Msa1149150 | AT1G76320.3 | 24.372 | 677 | 416 | 18 | 50 | 720 | 12 | 598 | 3.54e-47 | 179 |
Msa1149150 | AT1G76320.1 | 24.408 | 676 | 415 | 18 | 50 | 719 | 12 | 597 | 1.06e-46 | 178 |
Msa1149150 | AT1G76320.4 | 24.408 | 676 | 415 | 18 | 50 | 719 | 12 | 597 | 1.06e-46 | 178 |
Msa1149150 | AT1G76320.2 | 24.408 | 676 | 415 | 18 | 50 | 719 | 12 | 597 | 1.22e-46 | 178 |
Msa1149150 | AT3G22170.2 | 22.692 | 639 | 395 | 15 | 34 | 662 | 69 | 618 | 2.11e-43 | 169 |
Msa1149150 | AT3G22170.1 | 22.692 | 639 | 395 | 15 | 34 | 662 | 69 | 618 | 2.11e-43 | 169 |
Msa1149150 | AT5G18960.2 | 23.256 | 645 | 371 | 17 | 24 | 661 | 200 | 727 | 6.04e-42 | 164 |
Msa1149150 | AT5G18960.1 | 23.256 | 645 | 371 | 17 | 24 | 661 | 200 | 727 | 6.04e-42 | 164 |
Msa1149150 | AT1G10240.2 | 24.880 | 623 | 376 | 20 | 49 | 659 | 62 | 604 | 1.23e-41 | 162 |
Msa1149150 | AT1G10240.1 | 24.880 | 623 | 376 | 20 | 49 | 659 | 62 | 604 | 1.23e-41 | 162 |
Msa1149150 | AT5G28530.1 | 23.787 | 639 | 390 | 17 | 40 | 660 | 60 | 619 | 1.58e-39 | 156 |
Msa1149150 | AT4G38170.1 | 24.130 | 431 | 269 | 11 | 235 | 662 | 24 | 399 | 8.33e-39 | 152 |
Msa1149150 | AT5G28530.3 | 23.631 | 639 | 387 | 18 | 40 | 660 | 60 | 615 | 1.21e-38 | 154 |
Msa1149150 | AT5G28530.2 | 23.631 | 639 | 387 | 18 | 40 | 660 | 60 | 615 | 1.21e-38 | 154 |
Msa1149150 | AT2G32250.5 | 22.563 | 749 | 440 | 22 | 1 | 743 | 8 | 622 | 1.29e-34 | 142 |
Msa1149150 | AT2G32250.6 | 22.563 | 749 | 440 | 22 | 1 | 743 | 8 | 622 | 1.95e-34 | 141 |
Msa1149150 | AT2G32250.1 | 22.563 | 749 | 440 | 22 | 1 | 743 | 8 | 622 | 1.95e-34 | 141 |
Msa1149150 | AT2G32250.3 | 22.563 | 749 | 440 | 22 | 1 | 743 | 8 | 622 | 1.95e-34 | 141 |
Msa1149150 | AT2G32250.2 | 22.563 | 749 | 440 | 22 | 1 | 743 | 8 | 622 | 2.29e-34 | 141 |
Msa1149150 | AT2G32250.4 | 22.563 | 749 | 440 | 22 | 1 | 743 | 8 | 622 | 2.29e-34 | 141 |
Msa1149150 | AT2G32250.8 | 22.708 | 709 | 412 | 20 | 41 | 743 | 3 | 581 | 4.58e-34 | 140 |
Msa1149150 | AT2G32250.7 | 22.708 | 709 | 412 | 20 | 41 | 743 | 3 | 581 | 4.86e-34 | 140 |
Msa1149150 | AT1G80010.1 | 23.659 | 634 | 399 | 21 | 41 | 662 | 101 | 661 | 3.14e-33 | 137 |
Msa1149150 | AT1G52520.1 | 22.818 | 653 | 412 | 20 | 41 | 685 | 91 | 659 | 2.60e-30 | 128 |
Msa1149150 | AT4G19990.5 | 28.462 | 260 | 179 | 4 | 227 | 483 | 171 | 426 | 8.06e-24 | 107 |
Msa1149150 | AT4G19990.5 | 33.835 | 133 | 74 | 3 | 591 | 721 | 495 | 615 | 4.25e-11 | 67.0 |
Msa1149150 | AT4G19990.1 | 28.462 | 260 | 179 | 4 | 227 | 483 | 114 | 369 | 8.82e-24 | 107 |
Msa1149150 | AT4G19990.1 | 33.835 | 133 | 74 | 3 | 591 | 721 | 438 | 558 | 4.74e-11 | 67.0 |
Msa1149150 | AT4G19990.3 | 28.462 | 260 | 179 | 4 | 227 | 483 | 171 | 426 | 9.12e-24 | 107 |
Msa1149150 | AT4G19990.3 | 33.835 | 133 | 74 | 3 | 591 | 721 | 495 | 615 | 4.33e-11 | 67.0 |
Msa1149150 | AT4G19990.4 | 28.462 | 260 | 179 | 4 | 227 | 483 | 171 | 426 | 9.12e-24 | 107 |
Msa1149150 | AT4G19990.4 | 33.835 | 133 | 74 | 3 | 591 | 721 | 495 | 615 | 4.33e-11 | 67.0 |
Msa1149150 | AT4G19990.7 | 28.462 | 260 | 179 | 4 | 227 | 483 | 185 | 440 | 1.07e-23 | 107 |
Msa1149150 | AT4G19990.7 | 33.835 | 133 | 74 | 3 | 591 | 721 | 509 | 629 | 5.65e-11 | 66.6 |
Msa1149150 | AT4G19990.6 | 28.462 | 260 | 179 | 4 | 227 | 483 | 171 | 426 | 1.30e-23 | 107 |
Msa1149150 | AT4G19990.6 | 33.835 | 133 | 74 | 3 | 591 | 721 | 495 | 615 | 4.11e-11 | 67.4 |
Msa1149150 | AT4G19990.2 | 28.462 | 260 | 179 | 4 | 227 | 483 | 171 | 426 | 1.30e-23 | 107 |
Msa1149150 | AT4G19990.2 | 33.835 | 133 | 74 | 3 | 591 | 721 | 495 | 615 | 4.11e-11 | 67.4 |
Find 124 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 7_4:+30307949 | Msa1149150:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.166305 | 7_4:-30309084 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 7_4:+30308216 | Msa1149150:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 7_4:+30307155 | Msa1149150:CDS |
TACATTTCAGATGCCTTTCT+TGG | 0.255223 | 7_4:+30307668 | Msa1149150:intron |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 7_4:+30307701 | Msa1149150:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 7_4:-30307795 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 7_4:-30309078 | None:intergenic |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 7_4:+30307990 | Msa1149150:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 7_4:+30308930 | Msa1149150:CDS |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 7_4:-30307813 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 7_4:-30307205 | None:intergenic |
TTGGTTTGAATATTATCTTC+TGG | 0.345646 | 7_4:+30309327 | Msa1149150:three_prime_UTR |
TTTGCTTCTTCCGAGCTATA+AGG | 0.345757 | 7_4:-30309146 | None:intergenic |
GAGGGATAATCATGCTGATT+TGG | 0.346844 | 7_4:+30308249 | Msa1149150:CDS |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 7_4:+30308513 | Msa1149150:CDS |
AATTCTTGATTGTTATGTAT+TGG | 0.372244 | 7_4:+30309308 | Msa1149150:three_prime_UTR |
ATCTTCAAACCTTGGGGAAA+GGG | 0.383412 | 7_4:-30308554 | None:intergenic |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 7_4:+30308922 | Msa1149150:CDS |
TATGCATTGGTCTTCAGTTT+GGG | 0.387687 | 7_4:+30308090 | Msa1149150:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 7_4:+30307212 | Msa1149150:CDS |
TCATGCTGATTTGGACTTCA+AGG | 0.389304 | 7_4:+30308258 | Msa1149150:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 7_4:+30307204 | Msa1149150:CDS |
TTTCAATTTATCATATCTAA+TGG | 0.390380 | 7_4:+30306292 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 7_4:-30306675 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 7_4:+30309070 | Msa1149150:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 7_4:-30309060 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 7_4:+30308390 | Msa1149150:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 7_4:+30308955 | Msa1149150:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.403710 | 7_4:+30308089 | Msa1149150:CDS |
CCATGATTCTTTATCACTAA+AGG | 0.406174 | 7_4:-30306436 | None:intergenic |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 7_4:+30306446 | Msa1149150:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.412775 | 7_4:-30308806 | None:intergenic |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 7_4:-30308561 | None:intergenic |
CATGTTGTATGTTTGAGAAC+CGG | 0.413886 | 7_4:+30308638 | Msa1149150:CDS |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 7_4:+30306517 | Msa1149150:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 7_4:-30308562 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 7_4:+30306852 | Msa1149150:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 7_4:+30306734 | Msa1149150:CDS |
TGAATGTCTATAAGATATAT+AGG | 0.445219 | 7_4:+30306766 | Msa1149150:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 7_4:-30307806 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 7_4:+30306717 | Msa1149150:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 7_4:-30308739 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 7_4:+30306600 | Msa1149150:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 7_4:+30306882 | Msa1149150:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 7_4:+30306371 | Msa1149150:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 7_4:+30307880 | Msa1149150:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 7_4:+30308044 | Msa1149150:CDS |
CTCAAGTAGCGCAAATGCTC+TGG | 0.460440 | 7_4:-30306822 | None:intergenic |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 7_4:+30306566 | Msa1149150:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 7_4:+30306927 | Msa1149150:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 7_4:-30308392 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 7_4:-30306711 | None:intergenic |
ATTAATTATGCATATAACAC+TGG | 0.485542 | 7_4:+30306504 | Msa1149150:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.487361 | 7_4:-30308555 | None:intergenic |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 7_4:+30306995 | Msa1149150:CDS |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 7_4:+30306560 | Msa1149150:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 7_4:+30308406 | Msa1149150:CDS |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 7_4:+30307991 | Msa1149150:CDS |
CTATCTGTGAACCATCTGTT+GGG | 0.492981 | 7_4:+30309031 | Msa1149150:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 7_4:+30308230 | Msa1149150:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 7_4:-30308310 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 7_4:+30306914 | Msa1149150:CDS |
ATGTTGTATGTTTGAGAACC+GGG | 0.500556 | 7_4:+30308639 | Msa1149150:CDS |
ATTGGTCTTCAGTTTGGGTA+AGG | 0.502585 | 7_4:+30308095 | Msa1149150:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 7_4:-30307100 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 7_4:+30308077 | Msa1149150:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 7_4:+30308575 | Msa1149150:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 7_4:-30306966 | None:intergenic |
CTGAAATTCACCATGAATGT+TGG | 0.512824 | 7_4:+30308796 | Msa1149150:CDS |
AACAAAGAAGGTTTCAAGAT+GGG | 0.514533 | 7_4:+30306612 | Msa1149150:CDS |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 7_4:-30308198 | None:intergenic |
TGTCTATAAGATATATAGGT+GGG | 0.523740 | 7_4:+30306770 | Msa1149150:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 7_4:+30308576 | Msa1149150:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 7_4:-30308387 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+TGG | 0.532599 | 7_4:+30306611 | Msa1149150:CDS |
GACAGAAATTCCTTATAGCT+CGG | 0.533906 | 7_4:+30309136 | Msa1149150:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 7_4:-30308193 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 7_4:+30308407 | Msa1149150:CDS |
CCTTTAGTGATAAAGAATCA+TGG | 0.543522 | 7_4:+30306436 | Msa1149150:CDS |
TTGATATTGTTGTGCTTGAG+TGG | 0.546310 | 7_4:-30308830 | None:intergenic |
TACACGTGTTTGTGCAGATG+CGG | 0.550504 | 7_4:+30308882 | Msa1149150:CDS |
AAATGCTCTGGTTTATGTAA+TGG | 0.552634 | 7_4:-30306810 | None:intergenic |
CGTCAAAAGGAGATGGTGGT+TGG | 0.556443 | 7_4:+30307008 | Msa1149150:CDS |
TAATTTGGTTTCAAATGTCG+AGG | 0.556498 | 7_4:+30307964 | Msa1149150:CDS |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 7_4:-30307826 | None:intergenic |
GCTATCTGTGAACCATCTGT+TGG | 0.564131 | 7_4:+30309030 | Msa1149150:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 7_4:+30306395 | Msa1149150:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 7_4:+30306930 | Msa1149150:CDS |
TGAAGACTTAGAAGGTGTAA+CGG | 0.573475 | 7_4:-30308998 | None:intergenic |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 7_4:-30308311 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 7_4:-30309042 | None:intergenic |
TCGACTACAATTGGGATCAG+AGG | 0.585349 | 7_4:+30307999 | Msa1149150:CDS |
GAAGCAAAAGAAAGATGATG+AGG | 0.585686 | 7_4:+30309161 | Msa1149150:CDS |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 7_4:-30308332 | None:intergenic |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 7_4:+30306921 | Msa1149150:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 7_4:+30308923 | Msa1149150:CDS |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 7_4:+30307812 | Msa1149150:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 7_4:+30308918 | Msa1149150:CDS |
ATAAGTTAGGAAAGATGATG+AGG | 0.591839 | 7_4:+30309223 | Msa1149150:three_prime_UTR |
TTGAAGAAACCCTTTCCCCA+AGG | 0.594996 | 7_4:+30308545 | Msa1149150:CDS |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 7_4:+30307001 | Msa1149150:CDS |
GAGGCTTTAACAATTTAAGC+GGG | 0.600751 | 7_4:+30309180 | Msa1149150:exon |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 7_4:+30306915 | Msa1149150:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 7_4:+30308308 | Msa1149150:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 7_4:+30308393 | Msa1149150:CDS |
ATATCAACTTCATCTGAGAG+TGG | 0.614980 | 7_4:+30306360 | Msa1149150:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.620168 | 7_4:+30307004 | Msa1149150:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 7_4:-30306660 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 7_4:-30308046 | None:intergenic |
ACGTGTTTGTGCAGATGCGG+AGG | 0.627111 | 7_4:+30308885 | Msa1149150:CDS |
TGAGGCTTTAACAATTTAAG+CGG | 0.627823 | 7_4:+30309179 | Msa1149150:exon |
AATTTCAGCTTATCGACAGA+CGG | 0.628966 | 7_4:-30308781 | None:intergenic |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 7_4:-30308560 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 7_4:+30307881 | Msa1149150:CDS |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 7_4:+30308231 | Msa1149150:CDS |
ATGTCTATAAGATATATAGG+TGG | 0.643489 | 7_4:+30306769 | Msa1149150:CDS |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 7_4:-30308352 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 7_4:+30308907 | Msa1149150:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 7_4:-30308657 | None:intergenic |
TCAAACCATATACACAGACC+AGG | 0.671057 | 7_4:+30307808 | Msa1149150:CDS |
TGTTGTATGTTTGAGAACCG+GGG | 0.673760 | 7_4:+30308640 | Msa1149150:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 7_4:+30308491 | Msa1149150:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 7_4:+30308492 | Msa1149150:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTTTTTTATGTTATAAGTT+AGG | + | chr7_4:30309210-30309229 | Msa1149150:three_prime_UTR | 15.0% |
!! | ATTAATTATGCATATAACAC+TGG | + | chr7_4:30306504-30306523 | Msa1149150:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | + | chr7_4:30306560-30306579 | Msa1149150:CDS | 20.0% |
!! | TGAATGTCTATAAGATATAT+AGG | + | chr7_4:30306766-30306785 | Msa1149150:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr7_4:30307387-30307406 | Msa1149150:intron | 20.0% |
!! | AATTCTTGATTGTTATGTAT+TGG | + | chr7_4:30309308-30309327 | Msa1149150:three_prime_UTR | 20.0% |
! | TGAAAATTCAGTTATTGATG+CGG | + | chr7_4:30306395-30306414 | Msa1149150:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr7_4:30306556-30306575 | None:intergenic | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | + | chr7_4:30306566-30306585 | Msa1149150:CDS | 25.0% |
! | ATGTCTATAAGATATATAGG+TGG | + | chr7_4:30306769-30306788 | Msa1149150:CDS | 25.0% |
! | TGTCTATAAGATATATAGGT+GGG | + | chr7_4:30306770-30306789 | Msa1149150:CDS | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr7_4:30306882-30306901 | Msa1149150:CDS | 25.0% |
! | TGGATATCATAGTAAAAATC+TGG | - | chr7_4:30307083-30307102 | None:intergenic | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr7_4:30307204-30307223 | Msa1149150:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr7_4:30307230-30307249 | None:intergenic | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr7_4:30307277-30307296 | Msa1149150:intron | 25.0% |
!! | TGACTGTTTATATTGATTGA+AGG | + | chr7_4:30307359-30307378 | Msa1149150:intron | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr7_4:30307379-30307398 | Msa1149150:intron | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr7_4:30307386-30307405 | Msa1149150:intron | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr7_4:30307639-30307658 | Msa1149150:intron | 25.0% |
!! | ATGATTTTCAAAACCAAGAA+AGG | - | chr7_4:30307684-30307703 | None:intergenic | 25.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr7_4:30307857-30307876 | None:intergenic | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr7_4:30307949-30307968 | Msa1149150:CDS | 25.0% |
!!! | AGGATGAAAAACTGTTTTAA+TGG | + | chr7_4:30308019-30308038 | Msa1149150:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr7_4:30308023-30308042 | Msa1149150:CDS | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr7_4:30308216-30308235 | Msa1149150:CDS | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr7_4:30308355-30308374 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | - | chr7_4:30308390-30308409 | None:intergenic | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | + | chr7_4:30308390-30308409 | Msa1149150:CDS | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr7_4:30308491-30308510 | Msa1149150:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr7_4:30308492-30308511 | Msa1149150:CDS | 25.0% |
CCATGATTCTTTATCACTAA+AGG | - | chr7_4:30306439-30306458 | None:intergenic | 30.0% | |
CCTTTAGTGATAAAGAATCA+TGG | + | chr7_4:30306436-30306455 | Msa1149150:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | + | chr7_4:30306446-30306465 | Msa1149150:CDS | 30.0% | |
TAACAAAGAAGGTTTCAAGA+TGG | + | chr7_4:30306611-30306630 | Msa1149150:CDS | 30.0% | |
AACAAAGAAGGTTTCAAGAT+GGG | + | chr7_4:30306612-30306631 | Msa1149150:CDS | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr7_4:30306701-30306720 | Msa1149150:CDS | 30.0% | |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr7_4:30306734-30306753 | Msa1149150:CDS | 30.0% |
! | AAATGCTCTGGTTTATGTAA+TGG | - | chr7_4:30306813-30306832 | None:intergenic | 30.0% |
AGAACATCTTATGAAGTGAT+GGG | + | chr7_4:30306915-30306934 | Msa1149150:CDS | 30.0% | |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr7_4:30306959-30306978 | Msa1149150:CDS | 30.0% |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr7_4:30306969-30306988 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr7_4:30307155-30307174 | Msa1149150:CDS | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr7_4:30307208-30307227 | None:intergenic | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr7_4:30307212-30307231 | Msa1149150:CDS | 30.0% | |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr7_4:30307291-30307310 | Msa1149150:intron | 30.0% |
CTGGTATATGTGTGTTAATT+TGG | + | chr7_4:30307316-30307335 | Msa1149150:intron | 30.0% | |
AAACACATATGATCTTTCCA+TGG | - | chr7_4:30307450-30307469 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | + | chr7_4:30307598-30307617 | Msa1149150:intron | 30.0% | |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr7_4:30307798-30307817 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr7_4:30307848-30307867 | Msa1149150:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr7_4:30307860-30307879 | Msa1149150:CDS | 30.0% |
GAGAATGCAAAGAAAAATCT+CGG | + | chr7_4:30307905-30307924 | Msa1149150:CDS | 30.0% | |
! | TAATTTGGTTTCAAATGTCG+AGG | + | chr7_4:30307964-30307983 | Msa1149150:CDS | 30.0% |
AATCAGATTTCGACTACAAT+TGG | + | chr7_4:30307990-30308009 | Msa1149150:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr7_4:30307991-30308010 | Msa1149150:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr7_4:30308201-30308220 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr7_4:30308335-30308354 | None:intergenic | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | - | chr7_4:30308395-30308414 | None:intergenic | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | + | chr7_4:30308393-30308412 | Msa1149150:CDS | 30.0% | |
! | CAAAGTTTTCACAATTGAGA+AGG | + | chr7_4:30308450-30308469 | Msa1149150:CDS | 30.0% |
ATTATGATCTTCAAACCTTG+GGG | - | chr7_4:30308563-30308582 | None:intergenic | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr7_4:30308564-30308583 | None:intergenic | 30.0% | |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr7_4:30308575-30308594 | Msa1149150:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr7_4:30308576-30308595 | Msa1149150:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr7_4:30308672-30308691 | Msa1149150:CDS | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | + | chr7_4:30308675-30308694 | Msa1149150:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr7_4:30308740-30308759 | Msa1149150:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr7_4:30308907-30308926 | Msa1149150:CDS | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr7_4:30308955-30308974 | Msa1149150:CDS | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr7_4:30309063-30309082 | None:intergenic | 30.0% |
AAGAAAGACCAAATCCAATT+AGG | + | chr7_4:30309070-30309089 | Msa1149150:CDS | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr7_4:30309081-30309100 | None:intergenic | 30.0% | |
! | TGAGGCTTTAACAATTTAAG+CGG | + | chr7_4:30309179-30309198 | Msa1149150:exon | 30.0% |
ATAAGTTAGGAAAGATGATG+AGG | + | chr7_4:30309223-30309242 | Msa1149150:three_prime_UTR | 30.0% | |
! | TGAGGCTTTAACTAAAAAAG+CGG | + | chr7_4:30309241-30309260 | Msa1149150:three_prime_UTR | 30.0% |
!!! | GTGTTTGTTGCTGTTTTCAA+TGG | + | chr7_4:30306332-30306351 | Msa1149150:exon | 35.0% |
ATATCAACTTCATCTGAGAG+TGG | + | chr7_4:30306360-30306379 | Msa1149150:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | + | chr7_4:30306517-30306536 | Msa1149150:CDS | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | + | chr7_4:30306600-30306619 | Msa1149150:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr7_4:30306637-30306656 | Msa1149150:CDS | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr7_4:30306678-30306697 | None:intergenic | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr7_4:30306695-30306714 | Msa1149150:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr7_4:30306700-30306719 | Msa1149150:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr7_4:30306852-30306871 | Msa1149150:CDS | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | + | chr7_4:30306914-30306933 | Msa1149150:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | + | chr7_4:30306995-30307014 | Msa1149150:CDS | 35.0% | |
!!! | AAGACATAGCCAGTCTTTTT+TGG | + | chr7_4:30307117-30307136 | Msa1149150:CDS | 35.0% |
!!! | AGACATAGCCAGTCTTTTTT+GGG | + | chr7_4:30307118-30307137 | Msa1149150:CDS | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr7_4:30307297-30307316 | Msa1149150:intron | 35.0% |
!! | CACAAATTCTAAGGCAAGAT+AGG | - | chr7_4:30307417-30307436 | None:intergenic | 35.0% |
TGTACAGAGCACAAATTCTA+AGG | - | chr7_4:30307426-30307445 | None:intergenic | 35.0% | |
TCCAGCTATGCAAAGATTAT+AGG | + | chr7_4:30307544-30307563 | Msa1149150:intron | 35.0% | |
TACATTTCAGATGCCTTTCT+TGG | + | chr7_4:30307668-30307687 | Msa1149150:intron | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr7_4:30307701-30307720 | Msa1149150:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr7_4:30307744-30307763 | Msa1149150:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr7_4:30307873-30307892 | Msa1149150:CDS | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | + | chr7_4:30308033-30308052 | Msa1149150:CDS | 35.0% |
CTCATTCAAATCGTATGCAT+TGG | + | chr7_4:30308077-30308096 | Msa1149150:CDS | 35.0% | |
!! | TATGCATTGGTCTTCAGTTT+GGG | + | chr7_4:30308090-30308109 | Msa1149150:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr7_4:30308160-30308179 | Msa1149150:CDS | 35.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr7_4:30308230-30308249 | Msa1149150:CDS | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr7_4:30308231-30308250 | Msa1149150:CDS | 35.0% | |
! | GGTTTCGAATGTTGATGTTT+TGG | + | chr7_4:30308513-30308532 | Msa1149150:CDS | 35.0% |
CGATTATGATCTTCAAACCT+TGG | - | chr7_4:30308565-30308584 | None:intergenic | 35.0% | |
CATGTTGTATGTTTGAGAAC+CGG | + | chr7_4:30308638-30308657 | Msa1149150:CDS | 35.0% | |
ATGTTGTATGTTTGAGAACC+GGG | + | chr7_4:30308639-30308658 | Msa1149150:CDS | 35.0% | |
!! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr7_4:30308682-30308701 | Msa1149150:CDS | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr7_4:30308742-30308761 | None:intergenic | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr7_4:30308743-30308762 | Msa1149150:CDS | 35.0% |
AATTTCAGCTTATCGACAGA+CGG | - | chr7_4:30308784-30308803 | None:intergenic | 35.0% | |
CTGAAATTCACCATGAATGT+TGG | + | chr7_4:30308796-30308815 | Msa1149150:CDS | 35.0% | |
TTGATATTGTTGTGCTTGAG+TGG | - | chr7_4:30308833-30308852 | None:intergenic | 35.0% | |
! | TGAAGACTTAGAAGGTGTAA+CGG | - | chr7_4:30309001-30309020 | None:intergenic | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr7_4:30309009-30309028 | None:intergenic | 35.0% |
GACAGAAATTCCTTATAGCT+CGG | + | chr7_4:30309136-30309155 | Msa1149150:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr7_4:30309161-30309180 | Msa1149150:CDS | 35.0% | |
! | GAGGCTTTAACAATTTAAGC+GGG | + | chr7_4:30309180-30309199 | Msa1149150:exon | 35.0% |
! | GAGGCTTTAACTAAAAAAGC+GGG | + | chr7_4:30309242-30309261 | Msa1149150:three_prime_UTR | 35.0% |
ATCTGAGAGTGGACAATTGA+CGG | + | chr7_4:30306371-30306390 | Msa1149150:CDS | 40.0% | |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr7_4:30306651-30306670 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | + | chr7_4:30306921-30306940 | Msa1149150:CDS | 40.0% |
GCCTATAATCTTTGCATAGC+TGG | - | chr7_4:30307548-30307567 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr7_4:30307809-30307828 | None:intergenic | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr7_4:30307808-30307827 | Msa1149150:CDS | 40.0% | |
!! | GTATGCATTGGTCTTCAGTT+TGG | + | chr7_4:30308089-30308108 | Msa1149150:CDS | 40.0% |
!! | ATTGGTCTTCAGTTTGGGTA+AGG | + | chr7_4:30308095-30308114 | Msa1149150:CDS | 40.0% |
! | GTAAGGTCACATTTTACAGC+TGG | + | chr7_4:30308112-30308131 | Msa1149150:CDS | 40.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr7_4:30308196-30308215 | None:intergenic | 40.0% | |
! | GAGGGATAATCATGCTGATT+TGG | + | chr7_4:30308249-30308268 | Msa1149150:CDS | 40.0% |
!! | TCATGCTGATTTGGACTTCA+AGG | + | chr7_4:30308258-30308277 | Msa1149150:CDS | 40.0% |
TATGAGGAGGACACAACAAA+AGG | + | chr7_4:30308406-30308425 | Msa1149150:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | + | chr7_4:30308407-30308426 | Msa1149150:CDS | 40.0% | |
ATCTTCAAACCTTGGGGAAA+GGG | - | chr7_4:30308557-30308576 | None:intergenic | 40.0% | |
TGTTGTATGTTTGAGAACCG+GGG | + | chr7_4:30308640-30308659 | Msa1149150:CDS | 40.0% | |
!! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr7_4:30308685-30308704 | Msa1149150:CDS | 40.0% |
GTCTTTAGTGCCAACATTCA+TGG | - | chr7_4:30308809-30308828 | None:intergenic | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr7_4:30308918-30308937 | Msa1149150:CDS | 40.0% | |
CTATCTGTGAACCATCTGTT+GGG | + | chr7_4:30309031-30309050 | Msa1149150:CDS | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr7_4:30309087-30309106 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr7_4:30309149-30309168 | None:intergenic | 40.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr7_4:30306663-30306682 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr7_4:30306705-30306724 | Msa1149150:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr7_4:30306714-30306733 | None:intergenic | 45.0% | |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr7_4:30306717-30306736 | Msa1149150:CDS | 45.0% |
GACAACTCGTCAAAAGGAGA+TGG | + | chr7_4:30307001-30307020 | Msa1149150:CDS | 45.0% | |
AACTCGTCAAAAGGAGATGG+TGG | + | chr7_4:30307004-30307023 | Msa1149150:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr7_4:30307103-30307122 | None:intergenic | 45.0% | |
TCCATCTGCCCAAAAAAGAC+TGG | - | chr7_4:30307129-30307148 | None:intergenic | 45.0% | |
ATTTGTGCTCTGTACAGCCA+TGG | + | chr7_4:30307430-30307449 | Msa1149150:intron | 45.0% | |
TCGACTACAATTGGGATCAG+AGG | + | chr7_4:30307999-30308018 | Msa1149150:CDS | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | - | chr7_4:30308049-30308068 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr7_4:30308308-30308327 | Msa1149150:CDS | 45.0% | |
TTGAAGAAACCCTTTCCCCA+AGG | + | chr7_4:30308545-30308564 | Msa1149150:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr7_4:30308558-30308577 | None:intergenic | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr7_4:30308660-30308679 | None:intergenic | 45.0% | |
TACACGTGTTTGTGCAGATG+CGG | + | chr7_4:30308882-30308901 | Msa1149150:CDS | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr7_4:30308930-30308949 | Msa1149150:CDS | 45.0% | |
GCTATCTGTGAACCATCTGT+TGG | + | chr7_4:30309030-30309049 | Msa1149150:CDS | 45.0% | |
CTCAAGTAGCGCAAATGCTC+TGG | - | chr7_4:30306825-30306844 | None:intergenic | 50.0% | |
!! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr7_4:30306927-30306946 | Msa1149150:CDS | 50.0% |
! | CGTCAAAAGGAGATGGTGGT+TGG | + | chr7_4:30307008-30307027 | Msa1149150:CDS | 50.0% |
!!! | GCCAGTCTTTTTTGGGCAGA+TGG | + | chr7_4:30307125-30307144 | Msa1149150:CDS | 50.0% |
ACCATATACACAGACCAGGC+TGG | + | chr7_4:30307812-30307831 | Msa1149150:CDS | 50.0% | |
ACCAGCCTGGTCTGTGTATA+TGG | - | chr7_4:30307816-30307835 | None:intergenic | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr7_4:30307880-30307899 | Msa1149150:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr7_4:30307881-30307900 | Msa1149150:CDS | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | + | chr7_4:30308044-30308063 | Msa1149150:CDS | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr7_4:30308313-30308332 | None:intergenic | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr7_4:30308923-30308942 | Msa1149150:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr7_4:30309045-30309064 | None:intergenic | 50.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr7_4:30306930-30306949 | Msa1149150:CDS | 55.0% |
ACTTCAACAACGCACCAGCC+TGG | - | chr7_4:30307829-30307848 | None:intergenic | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr7_4:30308314-30308333 | None:intergenic | 55.0% | |
ACGTGTTTGTGCAGATGCGG+AGG | + | chr7_4:30308885-30308904 | Msa1149150:CDS | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr7_4:30308922-30308941 | Msa1149150:CDS | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr7_4:30308936-30308955 | Msa1149150:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 30306306 | 30309349 | 30306306 | ID=Msa1149150;Name=Msa1149150 |
chr7_4 | mRNA | 30306306 | 30309349 | 30306306 | ID=Msa1149150-mRNA-1;Parent=Msa1149150;Name=Msa1149150-mRNA-1;_AED=0.00;_eAED=0.00;_QI=45|1|1|1|1|1|2|152|800 |
chr7_4 | exon | 30306306 | 30307233 | 30306306 | ID=Msa1149150-mRNA-1:exon:7351;Parent=Msa1149150-mRNA-1 |
chr7_4 | exon | 30307678 | 30309349 | 30307678 | ID=Msa1149150-mRNA-1:exon:7352;Parent=Msa1149150-mRNA-1 |
chr7_4 | five_prime_UTR | 30306306 | 30306350 | 30306306 | ID=Msa1149150-mRNA-1:five_prime_utr;Parent=Msa1149150-mRNA-1 |
chr7_4 | CDS | 30306351 | 30307233 | 30306351 | ID=Msa1149150-mRNA-1:cds;Parent=Msa1149150-mRNA-1 |
chr7_4 | CDS | 30307678 | 30309197 | 30307678 | ID=Msa1149150-mRNA-1:cds;Parent=Msa1149150-mRNA-1 |
chr7_4 | three_prime_UTR | 30309198 | 30309349 | 30309198 | ID=Msa1149150-mRNA-1:three_prime_utr;Parent=Msa1149150-mRNA-1 |
Gene Sequence |
Protein sequence |