Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150200 | KEH22976.1 | 90.870 | 471 | 43 | 0 | 3 | 473 | 17 | 487 | 0.0 | 853 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150200 | sp|Q9ATB4|TAD2B_ARATH | 56.751 | 474 | 193 | 6 | 4 | 471 | 18 | 485 | 0.0 | 528 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150200 | A0A072U0P5 | 90.870 | 471 | 43 | 0 | 3 | 473 | 17 | 487 | 0.0 | 853 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1150200 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150200 | MtrunA17_Chr7g0239471 | 90.870 | 471 | 43 | 0 | 3 | 473 | 17 | 487 | 0.0 | 853 |
| Msa1150200 | MtrunA17_Chr2g0290321 | 72.067 | 537 | 79 | 8 | 4 | 473 | 19 | 551 | 0.0 | 747 |
| Msa1150200 | MtrunA17_Chr2g0290341 | 67.530 | 502 | 101 | 5 | 20 | 473 | 19 | 506 | 0.0 | 658 |
| Msa1150200 | MtrunA17_Chr3g0120841 | 47.970 | 542 | 208 | 8 | 2 | 469 | 19 | 560 | 6.94e-155 | 451 |
| Msa1150200 | MtrunA17_Chr3g0120231 | 65.385 | 208 | 60 | 1 | 278 | 473 | 2 | 209 | 4.42e-87 | 265 |
| Msa1150200 | MtrunA17_Chr3g0120201 | 46.565 | 262 | 119 | 5 | 223 | 469 | 6 | 261 | 4.30e-69 | 221 |
| Msa1150200 | MtrunA17_Chr3g0120221 | 61.728 | 162 | 60 | 1 | 4 | 163 | 16 | 177 | 2.01e-68 | 216 |
| Msa1150200 | MtrunA17_Chr7g0238851 | 89.610 | 77 | 8 | 0 | 5 | 81 | 5 | 81 | 2.99e-36 | 129 |
| Msa1150200 | MtrunA17_Chr3g0120191 | 60.274 | 73 | 29 | 0 | 93 | 165 | 11 | 83 | 1.23e-27 | 106 |
| Msa1150200 | MtrunA17_Chr3g0120181 | 72.414 | 58 | 16 | 0 | 24 | 81 | 2 | 59 | 4.96e-27 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150200 | AT4G16420.1 | 56.751 | 474 | 193 | 6 | 4 | 471 | 18 | 485 | 0.0 | 528 |
| Msa1150200 | AT4G16420.2 | 56.540 | 474 | 190 | 6 | 4 | 471 | 18 | 481 | 0.0 | 527 |
| Msa1150200 | AT4G16420.3 | 56.751 | 474 | 192 | 6 | 4 | 471 | 18 | 484 | 0.0 | 527 |
| Msa1150200 | AT3G07740.1 | 43.321 | 524 | 240 | 8 | 5 | 471 | 22 | 545 | 6.14e-136 | 403 |
| Msa1150200 | AT3G07740.3 | 43.564 | 505 | 229 | 7 | 23 | 471 | 20 | 524 | 4.15e-135 | 400 |
| Msa1150200 | AT3G07740.4 | 42.750 | 531 | 240 | 9 | 5 | 471 | 22 | 552 | 2.61e-133 | 396 |
| Msa1150200 | AT3G07740.2 | 43.129 | 473 | 213 | 7 | 55 | 471 | 2 | 474 | 2.30e-121 | 363 |
Find 109 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGTTGTAGGATCGGATTC+TGG | 0.216616 | 7_4:-33225008 | Msa1150200:intron |
| TCGTCATTTCTTGAGGATTT+TGG | 0.231649 | 7_4:+33224763 | None:intergenic |
| AACTGTATGGCATGAATAAC+TGG | 0.241253 | 7_4:-33225521 | Msa1150200:CDS |
| AAGAAATGACGACCCTTCTT+TGG | 0.279007 | 7_4:-33224752 | Msa1150200:CDS |
| AGTAGCTCGCCCTGCAGGTC+TGG | 0.289473 | 7_4:+33224002 | None:intergenic |
| AAACGTCTGTGCTGCGAGTT+AGG | 0.293920 | 7_4:-33223824 | Msa1150200:CDS |
| AGTTCTGTGTTCAGAGATAA+TGG | 0.309266 | 7_4:+33224283 | None:intergenic |
| GAAAAGAATTCAAGAGCTTA+AGG | 0.314875 | 7_4:-33224258 | Msa1150200:intron |
| GGCCTCTATTAGACGCCTTT+TGG | 0.319443 | 7_4:+33224949 | None:intergenic |
| ATGCTCATTAAGAAGGGATT+TGG | 0.323014 | 7_4:-33223668 | Msa1150200:CDS |
| ATGTGGTCCCGAACAATTGC+GGG | 0.328004 | 7_4:-33224062 | Msa1150200:CDS |
| CTCTCCATGCTTCCCTCTTC+CGG | 0.329198 | 7_4:-33225424 | Msa1150200:intron |
| AGCAGAGTCCTCAGACATTA+AGG | 0.330494 | 7_4:+33224029 | None:intergenic |
| TGATACGTATCTATAATAAA+AGG | 0.333141 | 7_4:-33224597 | Msa1150200:intron |
| TCCTCAGACATTAAGGCATT+TGG | 0.333840 | 7_4:+33224036 | None:intergenic |
| ACAAAAGCAATCATGCTTAC+AGG | 0.334147 | 7_4:-33225960 | Msa1150200:CDS |
| TCCCTCTCATTTGCCCGGAC+TGG | 0.337846 | 7_4:-33225700 | Msa1150200:CDS |
| TCAACACATAAGTCAAAATC+TGG | 0.338230 | 7_4:+33226015 | None:intergenic |
| TTGGAACCCCGCAATTGTTC+GGG | 0.352331 | 7_4:+33224055 | None:intergenic |
| ACACTATAGGATTGTGTACT+TGG | 0.367311 | 7_4:-33225448 | Msa1150200:CDS |
| TACTGTAATATCGATATTAC+AGG | 0.392999 | 7_4:-33226066 | Msa1150200:CDS |
| TTCAAGTTATGTCAATGAAA+TGG | 0.396353 | 7_4:-33223980 | Msa1150200:CDS |
| ATACACCATGTCAACTTTCA+TGG | 0.399055 | 7_4:+33223694 | None:intergenic |
| TTTGGAACCCCGCAATTGTT+CGG | 0.400298 | 7_4:+33224054 | None:intergenic |
| CTTCATCTGCGTTCCAGTCC+GGG | 0.401566 | 7_4:+33225687 | None:intergenic |
| GGTGTTAAATCCTTCTCAAA+TGG | 0.404781 | 7_4:+33224386 | None:intergenic |
| TCTTCATCTGCGTTCCAGTC+CGG | 0.405716 | 7_4:+33225686 | None:intergenic |
| GTCTTTCCCTCTCATTTGCC+CGG | 0.409274 | 7_4:-33225705 | Msa1150200:CDS |
| TCGCAGGAAGCTCGTGCTGC+TGG | 0.418619 | 7_4:-33224141 | Msa1150200:intron |
| GGAAGAAATTCATACTTGAT+AGG | 0.424040 | 7_4:-33224427 | Msa1150200:CDS |
| TAGGACATGTCTCATGTTGT+TGG | 0.424565 | 7_4:-33225325 | Msa1150200:CDS |
| TCTGCTGATCCCAGACCTGC+AGG | 0.434755 | 7_4:-33224012 | Msa1150200:CDS |
| TCTTGCCATGGGGAAAGGGC+AGG | 0.439550 | 7_4:-33225284 | Msa1150200:CDS |
| GTAGCTCGCCCTGCAGGTCT+GGG | 0.445211 | 7_4:+33224003 | None:intergenic |
| ATGTTGTAGGATCGGATTCT+GGG | 0.448817 | 7_4:-33225007 | Msa1150200:intron |
| GTTCATGCGCTTTCATACTA+AGG | 0.450239 | 7_4:-33224330 | Msa1150200:CDS |
| CTGTCAGTACAAATGATTGC+TGG | 0.451807 | 7_4:-33223764 | Msa1150200:CDS |
| AAGTTGAAGAAAGTGCCCTT+AGG | 0.452945 | 7_4:-33224101 | Msa1150200:CDS |
| GGCACACGGCACACTTAATC+CGG | 0.453805 | 7_4:+33226037 | None:intergenic |
| TGAGCAATTACTCGCCGATA+TGG | 0.455366 | 7_4:-33224668 | Msa1150200:CDS |
| AGTGGAGATAAATCAGAATC+TGG | 0.460035 | 7_4:-33226653 | Msa1150200:CDS |
| AACTTCTTGCCATGGGGAAA+GGG | 0.466541 | 7_4:-33225288 | Msa1150200:CDS |
| AGGCATGCACTGAACACTAT+AGG | 0.474478 | 7_4:-33225461 | Msa1150200:CDS |
| TCTAATAGAGGCCGAGGAAA+AGG | 0.475986 | 7_4:-33224939 | Msa1150200:intron |
| AAGGAGCGGGTGAAGCGAAA+AGG | 0.478432 | 7_4:-33226107 | Msa1150200:CDS |
| AAATCAGAATCTGGAGCTGC+AGG | 0.482339 | 7_4:-33226644 | Msa1150200:intron |
| AAGCACTTTCTCTTGCCCTA+AGG | 0.483082 | 7_4:+33224085 | None:intergenic |
| GAACTTCTTGCCATGGGGAA+AGG | 0.484313 | 7_4:-33225289 | Msa1150200:CDS |
| ACAGACTCCTCAAGAAATGC+TGG | 0.487743 | 7_4:-33224796 | Msa1150200:intron |
| CTTGAAGTAGCTCGCCCTGC+AGG | 0.492075 | 7_4:+33223997 | None:intergenic |
| CCACTGGCTTCAACCAAAGA+AGG | 0.493667 | 7_4:+33224739 | None:intergenic |
| GAAGCATGTCATACCGGAAG+AGG | 0.496402 | 7_4:+33225411 | None:intergenic |
| GTATGATATGCTCATTAAGA+AGG | 0.500449 | 7_4:-33223675 | Msa1150200:CDS |
| TCGATATTACAGGACAAATC+CGG | 0.502784 | 7_4:-33226056 | Msa1150200:CDS |
| AACCAAAAGGCGTCTAATAG+AGG | 0.505238 | 7_4:-33224951 | Msa1150200:CDS |
| CCAGTGGTTATAACCCGAAA+AGG | 0.507868 | 7_4:-33224723 | Msa1150200:CDS |
| AGCACTTTCTCTTGCCCTAA+GGG | 0.511703 | 7_4:+33224086 | None:intergenic |
| AACGTCTGTGCTGCGAGTTA+GGG | 0.514367 | 7_4:-33223823 | Msa1150200:CDS |
| TGCTCATCGGATGTTCCAGC+TGG | 0.519198 | 7_4:-33223720 | Msa1150200:CDS |
| AGTTGAAGAAAGTGCCCTTA+GGG | 0.524489 | 7_4:-33224100 | Msa1150200:CDS |
| CAACTTTCATGGTATCCAGC+TGG | 0.530057 | 7_4:+33223705 | None:intergenic |
| ATCTTCAGATACACAGTTGG+AGG | 0.533593 | 7_4:+33223797 | None:intergenic |
| AGGAGCGGGTGAAGCGAAAA+GGG | 0.534590 | 7_4:-33226106 | Msa1150200:CDS |
| ATCACCCTGCCCTTTCCCCA+TGG | 0.538821 | 7_4:+33225279 | None:intergenic |
| CAGAGAAGAACTTCTTGCCA+TGG | 0.541694 | 7_4:-33225296 | Msa1150200:CDS |
| TGGTTATAACCCGAAAAGGC+AGG | 0.543376 | 7_4:-33224719 | Msa1150200:CDS |
| AGAAGGGTCGTCATTTCTTG+AGG | 0.546910 | 7_4:+33224756 | None:intergenic |
| GGCAAGAGAAAGTGCTTATG+TGG | 0.547957 | 7_4:-33224079 | Msa1150200:CDS |
| CAAAAGCAATCATGCTTACA+GGG | 0.548051 | 7_4:-33225959 | Msa1150200:CDS |
| AGAGAAGAACTTCTTGCCAT+GGG | 0.548697 | 7_4:-33225295 | Msa1150200:CDS |
| CCTTCTTTGGTTGAAGCCAG+TGG | 0.549958 | 7_4:-33224739 | Msa1150200:CDS |
| CTTGCCATGGGGAAAGGGCA+GGG | 0.550128 | 7_4:-33225283 | Msa1150200:CDS |
| ATTTCCTCCAGCATTTCTTG+AGG | 0.551338 | 7_4:+33224789 | None:intergenic |
| TGCATCTTCAGATACACAGT+TGG | 0.554518 | 7_4:+33223794 | None:intergenic |
| AAGGCGTCTAATAGAGGCCG+AGG | 0.556171 | 7_4:-33224945 | Msa1150200:CDS |
| CTTCAAAATTCGATGCTCAT+CGG | 0.560327 | 7_4:-33223733 | Msa1150200:CDS |
| TGCAGCTAGGACTAACCAAA+AGG | 0.562637 | 7_4:-33224964 | Msa1150200:CDS |
| TTCCAGTCCGGGCAAATGAG+AGG | 0.567814 | 7_4:+33225698 | None:intergenic |
| AGAGTCGTTAAACTCCATAT+CGG | 0.568811 | 7_4:+33224654 | None:intergenic |
| TCCAGTCCGGGCAAATGAGA+GGG | 0.584062 | 7_4:+33225699 | None:intergenic |
| TCAAGACACATGCTGCAGCT+AGG | 0.590615 | 7_4:-33224977 | Msa1150200:CDS |
| ATATGCAAATCCATTTGAGA+AGG | 0.591672 | 7_4:-33224396 | Msa1150200:CDS |
| GTCAATGAAATGGATGCTGC+AGG | 0.592264 | 7_4:-33223970 | Msa1150200:CDS |
| TGTGAGTTAGGTCAAGGAGC+GGG | 0.592638 | 7_4:-33226120 | Msa1150200:intron |
| TATGATATGCTCATTAAGAA+GGG | 0.593230 | 7_4:-33223674 | Msa1150200:CDS |
| TGAGAAGGATTTAACACCAG+AGG | 0.597905 | 7_4:-33224381 | Msa1150200:CDS |
| CTGCTGATCCCAGACCTGCA+GGG | 0.599308 | 7_4:-33224011 | Msa1150200:CDS |
| CAATCATGCTTACAGGGTCA+TGG | 0.600463 | 7_4:-33225953 | Msa1150200:intron |
| GCAGAAGTTGCTGAGCATGT+TGG | 0.605076 | 7_4:-33225498 | Msa1150200:CDS |
| TCCAAATGCCTTAATGTCTG+AGG | 0.617436 | 7_4:-33224037 | Msa1150200:CDS |
| AAGCATGTCATACCGGAAGA+GGG | 0.618765 | 7_4:+33225412 | None:intergenic |
| CAACACATAAGTCAAAATCT+GGG | 0.618792 | 7_4:+33226016 | None:intergenic |
| GGGCAGGGTGATGACAAGAA+AGG | 0.622437 | 7_4:-33225268 | Msa1150200:intron |
| TATGTGGTCCCGAACAATTG+CGG | 0.625973 | 7_4:-33224063 | Msa1150200:CDS |
| CATACCGGAAGAGGGAAGCA+TGG | 0.631897 | 7_4:+33225420 | None:intergenic |
| TAAGTCAAAATCTGGGCACA+CGG | 0.634031 | 7_4:+33226023 | None:intergenic |
| TGCAGCATGTGTCTTGACTG+AGG | 0.636571 | 7_4:+33224983 | None:intergenic |
| GACTCCTCAAGAAATGCTGG+AGG | 0.641834 | 7_4:-33224793 | Msa1150200:CDS |
| TAACGACTCTGACACTGCGG+AGG | 0.652106 | 7_4:-33224641 | Msa1150200:CDS |
| CACTGGCTTCAACCAAAGAA+GGG | 0.653057 | 7_4:+33224740 | None:intergenic |
| TGTGTATCTGAAGATGCAAG+AGG | 0.661370 | 7_4:-33223789 | Msa1150200:CDS |
| TGTGGTCCCGAACAATTGCG+GGG | 0.670717 | 7_4:-33224061 | Msa1150200:CDS |
| TTGTGAGTTAGGTCAAGGAG+CGG | 0.679425 | 7_4:-33226121 | Msa1150200:intron |
| TGTTGGAACAAAGAACAAAG+AGG | 0.696475 | 7_4:-33225481 | Msa1150200:CDS |
| GGATACCATGAAAGTTGACA+TGG | 0.698778 | 7_4:-33223699 | Msa1150200:CDS |
| GAGAAGAACTTCTTGCCATG+GGG | 0.705178 | 7_4:-33225294 | Msa1150200:CDS |
| GGCTTGATGAAAGAGAGCGT+AGG | 0.711501 | 7_4:-33224448 | Msa1150200:CDS |
| ACTGTATGGCATGAATAACT+GGG | 0.718902 | 7_4:-33225520 | Msa1150200:CDS |
| GTTTAACGACTCTGACACTG+CGG | 0.772673 | 7_4:-33224644 | Msa1150200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAATTAAATTTCATTC+AGG | + | chr7_4:33223826-33223845 | None:intergenic | 10.0% |
| !!! | TTTATGTAACTAATTTTAAT+TGG | - | chr7_4:33224050-33224069 | Msa1150200:CDS | 10.0% |
| !! | TTCATTAAAATAAATGATTT+GGG | + | chr7_4:33224284-33224303 | None:intergenic | 10.0% |
| !! | TTTCATTAAAATAAATGATT+TGG | + | chr7_4:33224285-33224304 | None:intergenic | 10.0% |
| !!! | TTATTTTAATGAAAATCATT+TGG | - | chr7_4:33224291-33224310 | Msa1150200:CDS | 10.0% |
| !!! | AATATCTTTTTATTGTAATT+AGG | - | chr7_4:33224785-33224804 | Msa1150200:CDS | 10.0% |
| !! | ATTTATTCATTTATGATTAA+TGG | - | chr7_4:33225373-33225392 | Msa1150200:intron | 10.0% |
| !!! | TCTTTATAAGTTTTTTAATA+TGG | - | chr7_4:33225797-33225816 | Msa1150200:intron | 10.0% |
| !!! | AAATACCTTTTTTTTTTAAG+AGG | + | chr7_4:33224154-33224173 | None:intergenic | 15.0% |
| !! | AAAATAAAATGTAGTGTTTA+TGG | + | chr7_4:33224203-33224222 | None:intergenic | 15.0% |
| !! | AGCATATAAATGTATTTATA+TGG | - | chr7_4:33224959-33224978 | Msa1150200:CDS | 15.0% |
| !! | ACATAGTAAATTAAAAAATG+TGG | + | chr7_4:33224988-33225007 | None:intergenic | 15.0% |
| !! | TAAATAGACAATTGAATTTA+GGG | + | chr7_4:33225354-33225373 | None:intergenic | 15.0% |
| !! | ATAAATAGACAATTGAATTT+AGG | + | chr7_4:33225355-33225374 | None:intergenic | 15.0% |
| !!! | ATATGATAAAGCATTATATT+TGG | - | chr7_4:33225935-33225954 | Msa1150200:intron | 15.0% |
| !! | TAGTTATCAACATTATTATT+TGG | + | chr7_4:33226435-33226454 | None:intergenic | 15.0% |
| !!! | GAGTTTTATTATGTTTCAAA+AGG | + | chr7_4:33223677-33223696 | None:intergenic | 20.0% |
| !! | TAATTTAAATGTGTAGTCAT+AGG | - | chr7_4:33223836-33223855 | Msa1150200:intron | 20.0% |
| !! | CACATAAGTAAATTTACAAA+TGG | - | chr7_4:33223988-33224007 | Msa1150200:CDS | 20.0% |
| !!! | TTACATAAACAATTTTGTGT+AGG | + | chr7_4:33224039-33224058 | None:intergenic | 20.0% |
| !!! | ACTAATTTTAATTGGATGAT+AGG | - | chr7_4:33224058-33224077 | Msa1150200:CDS | 20.0% |
| !!! | AATTACTCACAATTTTTCAA+AGG | - | chr7_4:33224083-33224102 | Msa1150200:CDS | 20.0% |
| !!! | TCATATTGGTCAATTTTTAT+AGG | + | chr7_4:33224112-33224131 | None:intergenic | 20.0% |
| !! | CAAAATACTTACATTCATAT+TGG | + | chr7_4:33224126-33224145 | None:intergenic | 20.0% |
| !!! | TAAAATAAATGATTTGGGAT+TGG | + | chr7_4:33224279-33224298 | None:intergenic | 20.0% |
| !! | ACCAAAAACCAAATTAATTT+AGG | - | chr7_4:33224464-33224483 | Msa1150200:intron | 20.0% |
| !!! | ACCTAAATTAATTTGGTTTT+TGG | + | chr7_4:33224468-33224487 | None:intergenic | 20.0% |
| !!! | ACAAGATACATTTTTCAATT+TGG | - | chr7_4:33224517-33224536 | Msa1150200:intron | 20.0% |
| !!! | ATACATTTTTCAATTTGGTT+AGG | - | chr7_4:33224522-33224541 | Msa1150200:intron | 20.0% |
| !!! | TTTATTTTATAGTGATTCTG+TGG | + | chr7_4:33224632-33224651 | None:intergenic | 20.0% |
| !!! | GTTAATTTTATTTACTGTGT+AGG | - | chr7_4:33224847-33224866 | Msa1150200:intron | 20.0% |
| !!! | AATGTTTGAACATAATTTTC+TGG | - | chr7_4:33225398-33225417 | Msa1150200:intron | 20.0% |
| !!! | ATGTTTGAACATAATTTTCT+GGG | - | chr7_4:33225399-33225418 | Msa1150200:intron | 20.0% |
| !! | AGGAAAATATTTGAAAGTAA+TGG | + | chr7_4:33225627-33225646 | None:intergenic | 20.0% |
| !! | TAATGCAATTATATTAAAGG+CGG | + | chr7_4:33225735-33225754 | None:intergenic | 20.0% |
| !!! | TGGTAATGCAATTATATTAA+AGG | + | chr7_4:33225738-33225757 | None:intergenic | 20.0% |
| !! | TGATTTCATTACATAACATA+CGG | - | chr7_4:33226366-33226385 | Msa1150200:intron | 20.0% |
| !! | TTATCAACATTATTATTTGG+AGG | + | chr7_4:33226432-33226451 | None:intergenic | 20.0% |
| !! | TAACTACTAAAATATGTTTC+CGG | - | chr7_4:33226449-33226468 | Msa1150200:intron | 20.0% |
| !! | AAGAAAATGATAATTCACAT+TGG | + | chr7_4:33226502-33226521 | None:intergenic | 20.0% |
| !!! | AAAGGTGTGTATTTTATATT+TGG | - | chr7_4:33226626-33226645 | Msa1150200:intron | 20.0% |
| !! | TGATACGTATCTATAATAAA+AGG | - | chr7_4:33226950-33226969 | Msa1150200:intron | 20.0% |
| !! | TTTGAATTGAAAAACATTGA+AGG | - | chr7_4:33227078-33227097 | Msa1150200:intron | 20.0% |
| ! | ACTAGAGAGTAAATGATATT+AGG | - | chr7_4:33223738-33223757 | Msa1150200:CDS | 25.0% |
| !! | CTTATGTGACTAATTTTCAT+GGG | + | chr7_4:33223976-33223995 | None:intergenic | 25.0% |
| !! | ACTTATGTGACTAATTTTCA+TGG | + | chr7_4:33223977-33223996 | None:intergenic | 25.0% |
| !!! | CCTTTTTTTTTTAAGAGGAA+TGG | + | chr7_4:33224149-33224168 | None:intergenic | 25.0% |
| ! | CCATTCCTCTTAAAAAAAAA+AGG | - | chr7_4:33224146-33224165 | Msa1150200:intron | 25.0% |
| !! | GGTATTTTTCCATTCATTAT+TGG | - | chr7_4:33224167-33224186 | Msa1150200:intron | 25.0% |
| ! | AAAGAATAGCCAATAATGAA+TGG | + | chr7_4:33224179-33224198 | None:intergenic | 25.0% |
| !!! | GATATTTTTGACATTAGCAT+CGG | - | chr7_4:33224405-33224424 | Msa1150200:CDS | 25.0% |
| ! | TGAACTCACCTAAATTAATT+TGG | + | chr7_4:33224475-33224494 | None:intergenic | 25.0% |
| ! | AAAATGTATCTTGTCTGATT+CGG | + | chr7_4:33224511-33224530 | None:intergenic | 25.0% |
| ! | ATAGAGCATGATAATTGAAA+AGG | + | chr7_4:33224931-33224950 | None:intergenic | 25.0% |
| !!! | TTTTTAAACTTTGACTTGGA+TGG | + | chr7_4:33225071-33225090 | None:intergenic | 25.0% |
| !!! | TTGGTTTTTAAACTTTGACT+TGG | + | chr7_4:33225075-33225094 | None:intergenic | 25.0% |
| ! | GAAACTAAAGAATGAAAATG+TGG | + | chr7_4:33225108-33225127 | None:intergenic | 25.0% |
| !! | ATACACAATAAGTTTTCGTT+TGG | + | chr7_4:33225290-33225309 | None:intergenic | 25.0% |
| ! | GAAAACTTATTGTGTATGTT+TGG | - | chr7_4:33225293-33225312 | Msa1150200:CDS | 25.0% |
| !! | AATTGAATTTAGGGTTGTTA+GGG | + | chr7_4:33225345-33225364 | None:intergenic | 25.0% |
| !! | TGTTTGAACATAATTTTCTG+GGG | - | chr7_4:33225400-33225419 | Msa1150200:intron | 25.0% |
| ! | TACTGTAATATCGATATTAC+AGG | - | chr7_4:33225481-33225500 | Msa1150200:CDS | 25.0% |
| ! | TAAGTTTAACAAGACATCAA+AGG | + | chr7_4:33225647-33225666 | None:intergenic | 25.0% |
| !!! | TAACATTTTGATCGATAGAA+AGG | - | chr7_4:33225665-33225684 | Msa1150200:intron | 25.0% |
| ! | AAAACCAAAAAATTATCGCT+AGG | + | chr7_4:33225997-33226016 | None:intergenic | 25.0% |
| !!! | AGCGATAATTTTTTGGTTTT+AGG | - | chr7_4:33225997-33226016 | Msa1150200:CDS | 25.0% |
| !!! | GCGATAATTTTTTGGTTTTA+GGG | - | chr7_4:33225998-33226017 | Msa1150200:CDS | 25.0% |
| ! | CATGTCCTAATAAATAAGAA+CGG | + | chr7_4:33226211-33226230 | None:intergenic | 25.0% |
| ! | AATATTGTGCAATGTCAATT+GGG | + | chr7_4:33226660-33226679 | None:intergenic | 25.0% |
| !!! | AACAACCATTTTAGTTTTGT+TGG | - | chr7_4:33226975-33226994 | Msa1150200:intron | 25.0% |
| ! | AGAAACCAACAAAACTAAAA+TGG | + | chr7_4:33226983-33227002 | None:intergenic | 25.0% |
| !!! | TTTTTTTACGATTTTGAGTG+TGG | + | chr7_4:33227019-33227038 | None:intergenic | 25.0% |
| ! | TGGATGACATTAAATTGTTA+TGG | - | chr7_4:33227321-33227340 | Msa1150200:intron | 25.0% |
| !! | TTCAAGTTATGTCAATGAAA+TGG | - | chr7_4:33227567-33227586 | Msa1150200:intron | 25.0% |
| ! | TATGATATGCTCATTAAGAA+GGG | - | chr7_4:33227873-33227892 | Msa1150200:intron | 25.0% |
| ! | GTGAAGTAAAAGTTAGTTTG+TGG | + | chr7_4:33224017-33224036 | None:intergenic | 30.0% |
| TGAAAATAAGGAAGTTGACT+CGG | + | chr7_4:33224255-33224274 | None:intergenic | 30.0% | |
| ! | TTTGGGATTGGATGAAAATA+AGG | + | chr7_4:33224267-33224286 | None:intergenic | 30.0% |
| CCATACAACTTAATGAGAAT+TGG | + | chr7_4:33224322-33224341 | None:intergenic | 30.0% | |
| ! | CCAATTCTCATTAAGTTGTA+TGG | - | chr7_4:33224319-33224338 | Msa1150200:CDS | 30.0% |
| ! | TTTGAGACCAAAATAACTGA+TGG | + | chr7_4:33224437-33224456 | None:intergenic | 30.0% |
| TAATTTAGGTGAGTTCAGTT+TGG | - | chr7_4:33224478-33224497 | Msa1150200:intron | 30.0% | |
| ATAAGTTTGACAAAGGAACA+AGG | + | chr7_4:33224609-33224628 | None:intergenic | 30.0% | |
| ! | CCTATGTTTCTATGATTACT+CGG | + | chr7_4:33224689-33224708 | None:intergenic | 30.0% |
| CGAGTAATCATAGAAACATA+GGG | - | chr7_4:33224687-33224706 | Msa1150200:CDS | 30.0% | |
| ! | AAATCAAACCTTTTGCATGA+TGG | + | chr7_4:33224746-33224765 | None:intergenic | 30.0% |
| ! | ATGCAACTATATGTTTTACG+TGG | - | chr7_4:33224825-33224844 | Msa1150200:intron | 30.0% |
| TTTATTTACTGTGTAGGTCA+AGG | - | chr7_4:33224853-33224872 | Msa1150200:intron | 30.0% | |
| AAAATGTGGCTATATGCAAT+TGG | + | chr7_4:33225094-33225113 | None:intergenic | 30.0% | |
| ! | CAATTGAATTTAGGGTTGTT+AGG | + | chr7_4:33225346-33225365 | None:intergenic | 30.0% |
| CAACACATAAGTCAAAATCT+GGG | + | chr7_4:33225534-33225553 | None:intergenic | 30.0% | |
| TCAACACATAAGTCAAAATC+TGG | + | chr7_4:33225535-33225554 | None:intergenic | 30.0% | |
| CAATTATATTAAAGGCGGTT+TGG | + | chr7_4:33225730-33225749 | None:intergenic | 30.0% | |
| ! | AATTGCATTACCACTAGTTT+CGG | - | chr7_4:33225745-33225764 | Msa1150200:intron | 30.0% |
| AACAATATATCCGAAACTAG+TGG | + | chr7_4:33225758-33225777 | None:intergenic | 30.0% | |
| ! | TGAAGAAATTTTGCTTCTAG+AGG | - | chr7_4:33225878-33225897 | Msa1150200:intron | 30.0% |
| !!! | CTTTCCTAGCGATAATTTTT+TGG | - | chr7_4:33225990-33226009 | Msa1150200:CDS | 30.0% |
| ! | CGAATATGATAATGTGTTAC+CGG | + | chr7_4:33226161-33226180 | None:intergenic | 30.0% |
| ! | GCTAACCGTTCTTATTTATT+AGG | - | chr7_4:33226203-33226222 | Msa1150200:intron | 30.0% |
| GATGATTCTAAATACATCTC+CGG | + | chr7_4:33226471-33226490 | None:intergenic | 30.0% | |
| CTCTATCGTTTATATGTTGT+AGG | - | chr7_4:33226527-33226546 | Msa1150200:intron | 30.0% | |
| TCGTTTATATGTTGTAGGAT+CGG | - | chr7_4:33226532-33226551 | Msa1150200:intron | 30.0% | |
| ! | TAAAATACACACCTTTTCCT+CGG | + | chr7_4:33226622-33226641 | None:intergenic | 30.0% |
| CAATATTGTGCAATGTCAAT+TGG | + | chr7_4:33226661-33226680 | None:intergenic | 30.0% | |
| !! | TGCACAATATTGATTCTTTG+AGG | - | chr7_4:33226669-33226688 | Msa1150200:CDS | 30.0% |
| ! | ATATCAAATTCCTGCCTTTT+CGG | + | chr7_4:33226841-33226860 | None:intergenic | 30.0% |
| GGAAGAAATTCATACTTGAT+AGG | - | chr7_4:33227120-33227139 | Msa1150200:intron | 30.0% | |
| ATATGCAAATCCATTTGAGA+AGG | - | chr7_4:33227151-33227170 | Msa1150200:intron | 30.0% | |
| GAAAAGAATTCAAGAGCTTA+AGG | - | chr7_4:33227289-33227308 | Msa1150200:intron | 30.0% | |
| !!! | TTTTTGTTTTCTGAAACCGT+CGG | - | chr7_4:33227680-33227699 | Msa1150200:intron | 30.0% |
| GTATGATATGCTCATTAAGA+AGG | - | chr7_4:33227872-33227891 | Msa1150200:intron | 30.0% | |
| ! | ATATTAGGCCTTGTAAGCAA+AGG | - | chr7_4:33223753-33223772 | Msa1150200:CDS | 35.0% |
| TGAACAATCCTTTGCTTACA+AGG | + | chr7_4:33223764-33223783 | None:intergenic | 35.0% | |
| AAATGTGTAGTCATAGGTGT+TGG | - | chr7_4:33223842-33223861 | Msa1150200:intron | 35.0% | |
| !!! | TTTTTGACATTAGCATCGGT+CGG | - | chr7_4:33224409-33224428 | Msa1150200:CDS | 35.0% |
| TCTGTGGATAAGTTTGACAA+AGG | + | chr7_4:33224616-33224635 | None:intergenic | 35.0% | |
| CCGAGTAATCATAGAAACAT+AGG | - | chr7_4:33224686-33224705 | Msa1150200:CDS | 35.0% | |
| ATGATGATCCATCATGCAAA+AGG | - | chr7_4:33224735-33224754 | Msa1150200:CDS | 35.0% | |
| AAAAAGAAGAATGCTGCAAG+TGG | - | chr7_4:33224876-33224895 | Msa1150200:intron | 35.0% | |
| AGTGGAGATAAATCAGAATC+TGG | - | chr7_4:33224894-33224913 | Msa1150200:intron | 35.0% | |
| TGGATGGAAATGAACAAGTT+TGG | + | chr7_4:33225055-33225074 | None:intergenic | 35.0% | |
| CACTTTGACAATTTGTAGCT+TGG | - | chr7_4:33225208-33225227 | Msa1150200:intron | 35.0% | |
| TAGCTTGGAAATTATCGTCA+TGG | - | chr7_4:33225223-33225242 | Msa1150200:intron | 35.0% | |
| TATCGTCATGGAATGAGTAT+CGG | - | chr7_4:33225235-33225254 | Msa1150200:intron | 35.0% | |
| TCGATATTACAGGACAAATC+CGG | - | chr7_4:33225491-33225510 | Msa1150200:CDS | 35.0% | |
| !! | TAAGCATGATTGCTTTTGTG+GGG | + | chr7_4:33225586-33225605 | None:intergenic | 35.0% |
| !! | GTAAGCATGATTGCTTTTGT+GGG | + | chr7_4:33225587-33225606 | None:intergenic | 35.0% |
| !! | TGTAAGCATGATTGCTTTTG+TGG | + | chr7_4:33225588-33225607 | None:intergenic | 35.0% |
| ACAAAAGCAATCATGCTTAC+AGG | - | chr7_4:33225587-33225606 | Msa1150200:intron | 35.0% | |
| CAAAAGCAATCATGCTTACA+GGG | - | chr7_4:33225588-33225607 | Msa1150200:intron | 35.0% | |
| AGATTTACAAGCATTTCTGC+AGG | + | chr7_4:33225706-33225725 | None:intergenic | 35.0% | |
| GACAAATTATCCTGTCAACA+CGG | + | chr7_4:33225825-33225844 | None:intergenic | 35.0% | |
| !!! | ATTTTGCTTCTAGAGGTACT+TGG | - | chr7_4:33225885-33225904 | Msa1150200:intron | 35.0% |
| ! | TTTAAAGTAGACGTGACTAG+TGG | - | chr7_4:33225908-33225927 | Msa1150200:intron | 35.0% |
| !! | TTTTAGGGACTTGAACTGTA+TGG | - | chr7_4:33226013-33226032 | Msa1150200:CDS | 35.0% |
| AACTGTATGGCATGAATAAC+TGG | - | chr7_4:33226026-33226045 | Msa1150200:CDS | 35.0% | |
| ACTGTATGGCATGAATAACT+GGG | - | chr7_4:33226027-33226046 | Msa1150200:CDS | 35.0% | |
| TGTTGGAACAAAGAACAAAG+AGG | - | chr7_4:33226066-33226085 | Msa1150200:CDS | 35.0% | |
| ACACTATAGGATTGTGTACT+TGG | - | chr7_4:33226099-33226118 | Msa1150200:CDS | 35.0% | |
| TGCAATGTCAATTGGGATTT+AGG | + | chr7_4:33226653-33226672 | None:intergenic | 35.0% | |
| TGTCAATGACGAAAGAACTA+GGG | + | chr7_4:33226734-33226753 | None:intergenic | 35.0% | |
| ! | TCGTCATTTCTTGAGGATTT+TGG | + | chr7_4:33226787-33226806 | None:intergenic | 35.0% |
| ! | TATCAAATTCCTGCCTTTTC+GGG | + | chr7_4:33226840-33226859 | None:intergenic | 35.0% |
| AGAGTCGTTAAACTCCATAT+CGG | + | chr7_4:33226896-33226915 | None:intergenic | 35.0% | |
| GGTGTTAAATCCTTCTCAAA+TGG | + | chr7_4:33227164-33227183 | None:intergenic | 35.0% | |
| AGTTCTGTGTTCAGAGATAA+TGG | + | chr7_4:33227267-33227286 | None:intergenic | 35.0% | |
| AGAGCTTAAGGTTTGATTCA+TGG | - | chr7_4:33227301-33227320 | Msa1150200:intron | 35.0% | |
| !!! | CATTCACTTTTTTCACTGCA+TGG | - | chr7_4:33227345-33227364 | Msa1150200:intron | 35.0% |
| ! | CATTTGTTAAACATGATCGC+AGG | - | chr7_4:33227390-33227409 | Msa1150200:intron | 35.0% |
| CTTCAAAATTCGATGCTCAT+CGG | - | chr7_4:33227814-33227833 | Msa1150200:intron | 35.0% | |
| ATACACCATGTCAACTTTCA+TGG | + | chr7_4:33227856-33227875 | None:intergenic | 35.0% | |
| ATGCTCATTAAGAAGGGATT+TGG | - | chr7_4:33227879-33227898 | Msa1150200:intron | 35.0% | |
| ! | GAGGCTACTTTGAATGATTG+CGG | - | chr7_4:33223934-33223953 | Msa1150200:intron | 40.0% |
| ! | AGGCTACTTTGAATGATTGC+GGG | - | chr7_4:33223935-33223954 | Msa1150200:intron | 40.0% |
| !!! | TTTTGACATTAGCATCGGTC+GGG | - | chr7_4:33224410-33224429 | Msa1150200:CDS | 40.0% |
| TTTGAGTGTGCAATACGTAC+GGG | + | chr7_4:33224571-33224590 | None:intergenic | 40.0% | |
| GTTTGAGTGTGCAATACGTA+CGG | + | chr7_4:33224572-33224591 | None:intergenic | 40.0% | |
| AGTGTTTCTCGATCTTCGTA+AGG | - | chr7_4:33225133-33225152 | Msa1150200:intron | 40.0% | |
| AAGTGAATGAATGCACGCAT+TGG | + | chr7_4:33225193-33225212 | None:intergenic | 40.0% | |
| ATCGTCATGGAATGAGTATC+GGG | - | chr7_4:33225236-33225255 | Msa1150200:intron | 40.0% | |
| !! | TTCTGGGGATTTTGTGAGTT+AGG | - | chr7_4:33225415-33225434 | Msa1150200:intron | 40.0% |
| ! | GGATTTTGTGAGTTAGGTCA+AGG | - | chr7_4:33225421-33225440 | Msa1150200:intron | 40.0% |
| TAAGTCAAAATCTGGGCACA+CGG | + | chr7_4:33225527-33225546 | None:intergenic | 40.0% | |
| ! | TGTGTTGAGTGCTTTTCTGT+TGG | - | chr7_4:33225547-33225566 | Msa1150200:intron | 40.0% |
| ! | TAATATGGTTCCGTGTTGAC+AGG | - | chr7_4:33225812-33225831 | Msa1150200:intron | 40.0% |
| TAGGACATGTCTCATGTTGT+TGG | - | chr7_4:33226222-33226241 | Msa1150200:intron | 40.0% | |
| AGAGAAGAACTTCTTGCCAT+GGG | - | chr7_4:33226252-33226271 | Msa1150200:intron | 40.0% | |
| TATGTTGTAGGATCGGATTC+TGG | - | chr7_4:33226539-33226558 | Msa1150200:intron | 40.0% | |
| ATGTTGTAGGATCGGATTCT+GGG | - | chr7_4:33226540-33226559 | Msa1150200:intron | 40.0% | |
| !! | AACCAAAAGGCGTCTAATAG+AGG | - | chr7_4:33226596-33226615 | Msa1150200:intron | 40.0% |
| CTGTCAATGACGAAAGAACT+AGG | + | chr7_4:33226735-33226754 | None:intergenic | 40.0% | |
| ATTTCCTCCAGCATTTCTTG+AGG | + | chr7_4:33226761-33226780 | None:intergenic | 40.0% | |
| AAGAAATGACGACCCTTCTT+TGG | - | chr7_4:33226795-33226814 | Msa1150200:intron | 40.0% | |
| TGAGAAGGATTTAACACCAG+AGG | - | chr7_4:33227166-33227185 | Msa1150200:intron | 40.0% | |
| ! | CGACATATTGCATTTTCCTC+TGG | + | chr7_4:33227185-33227204 | None:intergenic | 40.0% |
| GTTCATGCGCTTTCATACTA+AGG | - | chr7_4:33227217-33227236 | Msa1150200:intron | 40.0% | |
| !! | AAGTTGAAGAAAGTGCCCTT+AGG | - | chr7_4:33227446-33227465 | Msa1150200:intron | 40.0% |
| !! | AGTTGAAGAAAGTGCCCTTA+GGG | - | chr7_4:33227447-33227466 | Msa1150200:intron | 40.0% |
| TCCAAATGCCTTAATGTCTG+AGG | - | chr7_4:33227510-33227529 | Msa1150200:intron | 40.0% | |
| ! | TCCTCAGACATTAAGGCATT+TGG | + | chr7_4:33227514-33227533 | None:intergenic | 40.0% |
| TGACAGAATATTACAGCCGA+CGG | + | chr7_4:33227699-33227718 | None:intergenic | 40.0% | |
| ATCTTCAGATACACAGTTGG+AGG | + | chr7_4:33227753-33227772 | None:intergenic | 40.0% | |
| TGCATCTTCAGATACACAGT+TGG | + | chr7_4:33227756-33227775 | None:intergenic | 40.0% | |
| TGTGTATCTGAAGATGCAAG+AGG | - | chr7_4:33227758-33227777 | Msa1150200:intron | 40.0% | |
| CTGTCAGTACAAATGATTGC+TGG | - | chr7_4:33227783-33227802 | Msa1150200:intron | 40.0% | |
| GGATACCATGAAAGTTGACA+TGG | - | chr7_4:33227848-33227867 | Msa1150200:intron | 40.0% | |
| ! | GTCGGGTCCATCAGTTATTT+TGG | - | chr7_4:33224427-33224446 | Msa1150200:CDS | 45.0% |
| ! | AAATCAGAATCTGGAGCTGC+AGG | - | chr7_4:33224903-33224922 | Msa1150200:intron | 45.0% |
| TTGTGAGTTAGGTCAAGGAG+CGG | - | chr7_4:33225426-33225445 | Msa1150200:CDS | 45.0% | |
| CAATCATGCTTACAGGGTCA+TGG | - | chr7_4:33225594-33225613 | Msa1150200:intron | 45.0% | |
| AGGCATGCACTGAACACTAT+AGG | - | chr7_4:33226086-33226105 | Msa1150200:CDS | 45.0% | |
| AAGCATGTCATACCGGAAGA+GGG | + | chr7_4:33226138-33226157 | None:intergenic | 45.0% | |
| ! | TTACCGGAAGCATGTCATAC+CGG | + | chr7_4:33226145-33226164 | None:intergenic | 45.0% |
| CAGAGAAGAACTTCTTGCCA+TGG | - | chr7_4:33226251-33226270 | Msa1150200:intron | 45.0% | |
| GAGAAGAACTTCTTGCCATG+GGG | - | chr7_4:33226253-33226272 | Msa1150200:intron | 45.0% | |
| AACTTCTTGCCATGGGGAAA+GGG | - | chr7_4:33226259-33226278 | Msa1150200:intron | 45.0% | |
| TGCAGCTAGGACTAACCAAA+AGG | - | chr7_4:33226583-33226602 | Msa1150200:intron | 45.0% | |
| TCTAATAGAGGCCGAGGAAA+AGG | - | chr7_4:33226608-33226627 | Msa1150200:intron | 45.0% | |
| ACAGACTCCTCAAGAAATGC+TGG | - | chr7_4:33226751-33226770 | Msa1150200:intron | 45.0% | |
| AGAAGGGTCGTCATTTCTTG+AGG | + | chr7_4:33226794-33226813 | None:intergenic | 45.0% | |
| !! | CACTGGCTTCAACCAAAGAA+GGG | + | chr7_4:33226810-33226829 | None:intergenic | 45.0% |
| !!! | CCTTTTCGGGTTATAACCAC+TGG | + | chr7_4:33226827-33226846 | None:intergenic | 45.0% |
| CCAGTGGTTATAACCCGAAA+AGG | - | chr7_4:33226824-33226843 | Msa1150200:intron | 45.0% | |
| TGGTTATAACCCGAAAAGGC+AGG | - | chr7_4:33226828-33226847 | Msa1150200:intron | 45.0% | |
| TGAGCAATTACTCGCCGATA+TGG | - | chr7_4:33226879-33226898 | Msa1150200:intron | 45.0% | |
| GTTTAACGACTCTGACACTG+CGG | - | chr7_4:33226903-33226922 | Msa1150200:intron | 45.0% | |
| AGCACTTTCTCTTGCCCTAA+GGG | + | chr7_4:33227464-33227483 | None:intergenic | 45.0% | |
| AAGCACTTTCTCTTGCCCTA+AGG | + | chr7_4:33227465-33227484 | None:intergenic | 45.0% | |
| !! | GGCAAGAGAAAGTGCTTATG+TGG | - | chr7_4:33227468-33227487 | Msa1150200:intron | 45.0% |
| TATGTGGTCCCGAACAATTG+CGG | - | chr7_4:33227484-33227503 | Msa1150200:intron | 45.0% | |
| ! | TTTGGAACCCCGCAATTGTT+CGG | + | chr7_4:33227496-33227515 | None:intergenic | 45.0% |
| AGCAGAGTCCTCAGACATTA+AGG | + | chr7_4:33227521-33227540 | None:intergenic | 45.0% | |
| GTCAATGAAATGGATGCTGC+AGG | - | chr7_4:33227577-33227596 | Msa1150200:intron | 45.0% | |
| GTCGGCTGTAATATTCTGTC+AGG | - | chr7_4:33227698-33227717 | Msa1150200:intron | 45.0% | |
| CAACTTTCATGGTATCCAGC+TGG | + | chr7_4:33227845-33227864 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTTTG+AGG | - | chr7_4:33223915-33223934 | Msa1150200:intron | 5.0% |
| !!! | TTTAAATTTTTTTATTTTGT+TGG | - | chr7_4:33224545-33224564 | Msa1150200:intron | 5.0% |
| !!! | TTTTACAAAATAATAAATAA+AGG | + | chr7_4:33224657-33224676 | None:intergenic | 5.0% |
| GTTTGGATCGAAGCGTGCTT+TGG | - | chr7_4:33225310-33225329 | Msa1150200:CDS | 50.0% | |
| TGTGAGTTAGGTCAAGGAGC+GGG | - | chr7_4:33225427-33225446 | Msa1150200:CDS | 50.0% | |
| GTCTTTCCCTCTCATTTGCC+CGG | - | chr7_4:33225842-33225861 | Msa1150200:intron | 50.0% | |
| TCTTCATCTGCGTTCCAGTC+CGG | + | chr7_4:33225864-33225883 | None:intergenic | 50.0% | |
| GCAGAAGTTGCTGAGCATGT+TGG | - | chr7_4:33226049-33226068 | Msa1150200:CDS | 50.0% | |
| GAAGCATGTCATACCGGAAG+AGG | + | chr7_4:33226139-33226158 | None:intergenic | 50.0% | |
| CTTCCGGTATGACATGCTTC+CGG | - | chr7_4:33226139-33226158 | Msa1150200:intron | 50.0% | |
| GAACTTCTTGCCATGGGGAA+AGG | - | chr7_4:33226258-33226277 | Msa1150200:intron | 50.0% | |
| TGCAGCATGTGTCTTGACTG+AGG | + | chr7_4:33226567-33226586 | None:intergenic | 50.0% | |
| TCAAGACACATGCTGCAGCT+AGG | - | chr7_4:33226570-33226589 | Msa1150200:intron | 50.0% | |
| ! | GGCCTCTATTAGACGCCTTT+TGG | + | chr7_4:33226601-33226620 | None:intergenic | 50.0% |
| GACTCCTCAAGAAATGCTGG+AGG | - | chr7_4:33226754-33226773 | Msa1150200:intron | 50.0% | |
| !! | CCACTGGCTTCAACCAAAGA+AGG | + | chr7_4:33226811-33226830 | None:intergenic | 50.0% |
| CCTTCTTTGGTTGAAGCCAG+TGG | - | chr7_4:33226808-33226827 | Msa1150200:intron | 50.0% | |
| ! | GGCTTGATGAAAGAGAGCGT+AGG | - | chr7_4:33227099-33227118 | Msa1150200:intron | 50.0% |
| ATGTGGTCCCGAACAATTGC+GGG | - | chr7_4:33227485-33227504 | Msa1150200:intron | 50.0% | |
| TTGGAACCCCGCAATTGTTC+GGG | + | chr7_4:33227495-33227514 | None:intergenic | 50.0% | |
| AAACGTCTGTGCTGCGAGTT+AGG | - | chr7_4:33227723-33227742 | Msa1150200:intron | 50.0% | |
| AACGTCTGTGCTGCGAGTTA+GGG | - | chr7_4:33227724-33227743 | Msa1150200:intron | 50.0% | |
| AAGGAGCGGGTGAAGCGAAA+AGG | - | chr7_4:33225440-33225459 | Msa1150200:CDS | 55.0% | |
| AGGAGCGGGTGAAGCGAAAA+GGG | - | chr7_4:33225441-33225460 | Msa1150200:CDS | 55.0% | |
| GGCACACGGCACACTTAATC+CGG | + | chr7_4:33225513-33225532 | None:intergenic | 55.0% | |
| TCCAGTCCGGGCAAATGAGA+GGG | + | chr7_4:33225851-33225870 | None:intergenic | 55.0% | |
| TTCCAGTCCGGGCAAATGAG+AGG | + | chr7_4:33225852-33225871 | None:intergenic | 55.0% | |
| CTTCATCTGCGTTCCAGTCC+GGG | + | chr7_4:33225863-33225882 | None:intergenic | 55.0% | |
| CTCTCCATGCTTCCCTCTTC+CGG | - | chr7_4:33226123-33226142 | Msa1150200:intron | 55.0% | |
| CATACCGGAAGAGGGAAGCA+TGG | + | chr7_4:33226130-33226149 | None:intergenic | 55.0% | |
| GGGCAGGGTGATGACAAGAA+AGG | - | chr7_4:33226279-33226298 | Msa1150200:intron | 55.0% | |
| ! | AAGGCGTCTAATAGAGGCCG+AGG | - | chr7_4:33226602-33226621 | Msa1150200:intron | 55.0% |
| TAACGACTCTGACACTGCGG+AGG | - | chr7_4:33226906-33226925 | Msa1150200:intron | 55.0% | |
| TGTGGTCCCGAACAATTGCG+GGG | - | chr7_4:33227486-33227505 | Msa1150200:intron | 55.0% | |
| TGCTCATCGGATGTTCCAGC+TGG | - | chr7_4:33227827-33227846 | Msa1150200:intron | 55.0% | |
| TCCCTCTCATTTGCCCGGAC+TGG | - | chr7_4:33225847-33225866 | Msa1150200:intron | 60.0% | |
| TCTTGCCATGGGGAAAGGGC+AGG | - | chr7_4:33226263-33226282 | Msa1150200:intron | 60.0% | |
| CTTGCCATGGGGAAAGGGCA+GGG | - | chr7_4:33226264-33226283 | Msa1150200:intron | 60.0% | |
| ATCACCCTGCCCTTTCCCCA+TGG | + | chr7_4:33226271-33226290 | None:intergenic | 60.0% | |
| TCTGCTGATCCCAGACCTGC+AGG | - | chr7_4:33227535-33227554 | Msa1150200:intron | 60.0% | |
| CTGCTGATCCCAGACCTGCA+GGG | - | chr7_4:33227536-33227555 | Msa1150200:intron | 60.0% | |
| CTTGAAGTAGCTCGCCCTGC+AGG | + | chr7_4:33227553-33227572 | None:intergenic | 60.0% | |
| TCGCAGGAAGCTCGTGCTGC+TGG | - | chr7_4:33227406-33227425 | Msa1150200:intron | 65.0% | |
| GTAGCTCGCCCTGCAGGTCT+GGG | + | chr7_4:33227547-33227566 | None:intergenic | 65.0% | |
| AGTAGCTCGCCCTGCAGGTC+TGG | + | chr7_4:33227548-33227567 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 33223658 | 33227911 | 33223658 | ID=Msa1150200;Name=Msa1150200 |
| chr7_4 | mRNA | 33223658 | 33227911 | 33223658 | ID=Msa1150200-mRNA-1;Parent=Msa1150200;Name=Msa1150200-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|0.81|0.9|0.90|11|0|473 |
| chr7_4 | exon | 33227904 | 33227911 | 33227904 | ID=Msa1150200-mRNA-1:exon:7936;Parent=Msa1150200-mRNA-1 |
| chr7_4 | exon | 33226645 | 33226700 | 33226645 | ID=Msa1150200-mRNA-1:exon:7935;Parent=Msa1150200-mRNA-1 |
| chr7_4 | exon | 33225954 | 33226132 | 33225954 | ID=Msa1150200-mRNA-1:exon:7934;Parent=Msa1150200-mRNA-1 |
| chr7_4 | exon | 33225670 | 33225735 | 33225670 | ID=Msa1150200-mRNA-1:exon:7933;Parent=Msa1150200-mRNA-1 |
| chr7_4 | exon | 33225425 | 33225550 | 33225425 | ID=Msa1150200-mRNA-1:exon:7932;Parent=Msa1150200-mRNA-1 |
| chr7_4 | exon | 33225269 | 33225344 | 33225269 | ID=Msa1150200-mRNA-1:exon:7931;Parent=Msa1150200-mRNA-1 |
| chr7_4 | exon | 33224940 | 33225020 | 33224940 | ID=Msa1150200-mRNA-1:exon:7930;Parent=Msa1150200-mRNA-1 |
| chr7_4 | exon | 33224598 | 33224814 | 33224598 | ID=Msa1150200-mRNA-1:exon:7929;Parent=Msa1150200-mRNA-1 |
| chr7_4 | exon | 33224259 | 33224469 | 33224259 | ID=Msa1150200-mRNA-1:exon:7928;Parent=Msa1150200-mRNA-1 |
| chr7_4 | exon | 33223948 | 33224157 | 33223948 | ID=Msa1150200-mRNA-1:exon:7927;Parent=Msa1150200-mRNA-1 |
| chr7_4 | exon | 33223658 | 33223849 | 33223658 | ID=Msa1150200-mRNA-1:exon:7926;Parent=Msa1150200-mRNA-1 |
| chr7_4 | CDS | 33227904 | 33227911 | 33227904 | ID=Msa1150200-mRNA-1:cds;Parent=Msa1150200-mRNA-1 |
| chr7_4 | CDS | 33226645 | 33226700 | 33226645 | ID=Msa1150200-mRNA-1:cds;Parent=Msa1150200-mRNA-1 |
| chr7_4 | CDS | 33225954 | 33226132 | 33225954 | ID=Msa1150200-mRNA-1:cds;Parent=Msa1150200-mRNA-1 |
| chr7_4 | CDS | 33225670 | 33225735 | 33225670 | ID=Msa1150200-mRNA-1:cds;Parent=Msa1150200-mRNA-1 |
| chr7_4 | CDS | 33225425 | 33225550 | 33225425 | ID=Msa1150200-mRNA-1:cds;Parent=Msa1150200-mRNA-1 |
| chr7_4 | CDS | 33225269 | 33225344 | 33225269 | ID=Msa1150200-mRNA-1:cds;Parent=Msa1150200-mRNA-1 |
| chr7_4 | CDS | 33224940 | 33225020 | 33224940 | ID=Msa1150200-mRNA-1:cds;Parent=Msa1150200-mRNA-1 |
| chr7_4 | CDS | 33224598 | 33224814 | 33224598 | ID=Msa1150200-mRNA-1:cds;Parent=Msa1150200-mRNA-1 |
| chr7_4 | CDS | 33224259 | 33224469 | 33224259 | ID=Msa1150200-mRNA-1:cds;Parent=Msa1150200-mRNA-1 |
| chr7_4 | CDS | 33223948 | 33224157 | 33223948 | ID=Msa1150200-mRNA-1:cds;Parent=Msa1150200-mRNA-1 |
| chr7_4 | CDS | 33223658 | 33223849 | 33223658 | ID=Msa1150200-mRNA-1:cds;Parent=Msa1150200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
