AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1152080


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1152080 MtrunA17_Chr4g0025881 77.500 280 13 5 4 273 156 395 6.54e-142 407
Msa1152080 MtrunA17_Chr1g0177351 55.714 280 73 7 4 272 160 399 3.51e-89 273
Msa1152080 MtrunA17_Chr3g0142581 53.614 166 74 2 4 169 120 282 2.43e-51 172
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1152080 AT5G22220.2 53.356 298 72 9 4 276 147 402 8.39e-85 262
Msa1152080 AT5G22220.3 53.356 298 72 9 4 276 147 402 9.19e-85 262
Msa1152080 AT2G36010.1 52.941 272 96 8 4 272 185 427 3.71e-79 248
Msa1152080 AT2G36010.3 53.285 274 94 9 4 272 185 429 3.04e-78 246
Msa1152080 AT2G36010.2 50.554 271 89 9 4 272 231 458 1.38e-65 214
Msa1152080 AT1G47870.1 55.422 166 69 3 4 169 173 333 3.39e-52 176
Msa1152080 AT1G47870.2 55.422 166 69 3 4 169 172 332 3.81e-52 176

Find 73 sgRNAs with CRISPR-Local

Find 460 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGGACTGGGTGGAAATT+TGG 0.097642 7_4:+37267059 None:intergenic
ATTTCCTTCCCTTTATCTTT+TGG 0.142002 7_4:+37267009 None:intergenic
GATTGATCCTTGTCAACTTC+TGG 0.245702 7_4:+37267042 None:intergenic
TCCTGTATCTGTATCTTCTC+TGG 0.253754 7_4:+37267310 None:intergenic
CAATGGATGTTTACCTTGTT+AGG 0.281653 7_4:-37267263 Msa1152080:CDS
AAAGAACTTGCCCTGCTTCC+AGG 0.295888 7_4:-37267615 Msa1152080:intron
TCTGGACTGGGTGGAAATTT+GGG 0.304822 7_4:+37267060 None:intergenic
GCCGGTTGGATGAACAAATA+AGG 0.325041 7_4:-37267888 Msa1152080:intron
ATCCTTGTCAACTTCTGGAC+TGG 0.369071 7_4:+37267047 None:intergenic
TCCTCTTAAATTACCTCATC+AGG 0.378875 7_4:+37267416 None:intergenic
TAATGCTGCTGACACATTAG+AGG 0.382091 7_4:-37268510 Msa1152080:intron
ACCTTATTTGTTCATCCAAC+CGG 0.394452 7_4:+37267887 None:intergenic
CCTGTATCTGTATCTTCTCT+GGG 0.397716 7_4:+37267311 None:intergenic
GATATTACTAATGTTCTTGA+AGG 0.421983 7_4:-37268387 Msa1152080:CDS
TTGATAATTGACCAGGGTGC+TGG 0.425291 7_4:-37268243 Msa1152080:intron
ACTGTGGTCCCAAAAGATAA+AGG 0.425594 7_4:-37267018 Msa1152080:CDS
TCCTTGTCAACTTCTGGACT+GGG 0.426039 7_4:+37267048 None:intergenic
ACTAATGTTCTTGAAGGGAT+TGG 0.429531 7_4:-37268381 Msa1152080:CDS
TTTGCTATCATTTGCTTCAA+AGG 0.436037 7_4:-37267219 Msa1152080:CDS
AATTGAAAATTTAACAATTG+AGG 0.437163 7_4:-37267914 Msa1152080:CDS
AGCTTTAATTGCTGCTATGA+AGG 0.451721 7_4:+37267469 None:intergenic
CCCAGAGAAGATACAGATAC+AGG 0.458565 7_4:-37267311 Msa1152080:CDS
TCAAGCATCATCGCTTCATA+TGG 0.469303 7_4:+37267168 None:intergenic
AGCTCCACACGGTACCACTT+TGG 0.473177 7_4:-37267450 Msa1152080:CDS
CTGTGGTCCCAAAAGATAAA+GGG 0.476177 7_4:-37267017 Msa1152080:CDS
CTATCATTTGCTTCAAAGGT+CGG 0.483134 7_4:-37267215 Msa1152080:CDS
GTGCTGGATGTTTCAAAACC+AGG 0.484861 7_4:-37268227 Msa1152080:CDS
TAAATTACCTCATCAGGATC+AGG 0.485605 7_4:+37267422 None:intergenic
TCAATTTGAAGAGAAGTTTG+AGG 0.491087 7_4:-37267085 Msa1152080:CDS
AGGGAAACTAACCTGGAAGC+AGG 0.501301 7_4:+37267604 None:intergenic
TGTGTCTACAGGTGCAAAAG+AGG 0.505867 7_4:-37268419 Msa1152080:intron
ATATTACTAATGTTCTTGAA+GGG 0.506571 7_4:-37268386 Msa1152080:CDS
ACTCACGAAGTCGTGATTGT+TGG 0.507659 7_4:+37266942 None:intergenic
AACAATCACGACTTCGTGAG+TGG 0.509503 7_4:-37266940 Msa1152080:CDS
AAACTATCATCGGCCTCCCC+TGG 0.512893 7_4:+37268209 None:intergenic
ATAGTCTTGAGAAGCACAAT+GGG 0.518369 7_4:-37267288 Msa1152080:CDS
AACAATTGAGGAACGCCGGT+TGG 0.534246 7_4:-37267902 Msa1152080:CDS
GTGCAGAGGCAAGATGGTGA+AGG 0.537026 7_4:-37266982 Msa1152080:CDS
TAAACTAGCAAAACTATCAT+CGG 0.544252 7_4:+37268199 None:intergenic
TAACAAGGTAAACATCCATT+GGG 0.550555 7_4:+37267265 None:intergenic
CTAACAAGGTAAACATCCAT+TGG 0.555073 7_4:+37267264 None:intergenic
ATAGTTAAAATAACCATGAA+AGG 0.560242 7_4:-37274110 None:intergenic
TGCTGGATGTTTCAAAACCA+GGG 0.562613 7_4:-37268226 Msa1152080:CDS
AACAAATATCCCACGGACTG+AGG 0.563568 7_4:+37266876 None:intergenic
GAGAAGCACAATGGGCCCAA+TGG 0.590253 7_4:-37267280 Msa1152080:CDS
GTAAGCATCACCTCAGTCCG+TGG 0.590909 7_4:-37266886 Msa1152080:CDS
GGGAGATGCAAGAAAGACTA+CGG 0.594499 7_4:-37267767 Msa1152080:CDS
AAAGCATACGGTACCTAACA+AGG 0.595411 7_4:+37267250 None:intergenic
CGGTCATTTAGCTATTGCAA+TGG 0.599036 7_4:-37267195 Msa1152080:CDS
ATAGAAGTGCAGAGGCAAGA+TGG 0.599600 7_4:-37266988 Msa1152080:CDS
GATAGTCTTGAGAAGCACAA+TGG 0.600721 7_4:-37267289 Msa1152080:CDS
ATGCTTACAGCAACATCTGA+AGG 0.604268 7_4:+37266901 None:intergenic
ATTTAACAATTGAGGAACGC+CGG 0.605519 7_4:-37267906 Msa1152080:CDS
GGGAAACTAACCTGGAAGCA+GGG 0.607358 7_4:+37267605 None:intergenic
TGCAGAGGCAAGATGGTGAA+GGG 0.612592 7_4:-37266981 Msa1152080:CDS
GTCTACAGGTGCAAAAGAGG+AGG 0.622913 7_4:-37268416 Msa1152080:intron
AGTTCAAGAACAGAATTCAG+TGG 0.624987 7_4:-37268344 Msa1152080:CDS
GGATGTTTCAAAACCAGGGG+AGG 0.630692 7_4:-37268222 Msa1152080:CDS
AATACAAAACAAATATCCCA+CGG 0.630724 7_4:+37266869 None:intergenic
ACAATCACGACTTCGTGAGT+GGG 0.632953 7_4:-37266939 Msa1152080:CDS
TAAGCATCACCTCAGTCCGT+GGG 0.634769 7_4:-37266885 Msa1152080:CDS
GGAAGTACCTGATCCTGATG+AGG 0.635583 7_4:-37267429 Msa1152080:intron
GGAAGGAAATAGAAGTGCAG+AGG 0.640012 7_4:-37266996 Msa1152080:CDS
CTGTATCTGTATCTTCTCTG+GGG 0.646320 7_4:+37267312 None:intergenic
TTGTCAACTTCTGGACTGGG+TGG 0.646660 7_4:+37267051 None:intergenic
AGGATCAGGTACTTCCAAAG+TGG 0.647576 7_4:+37267436 None:intergenic
ACCCAGTCCAGAAGTTGACA+AGG 0.647730 7_4:-37267049 Msa1152080:CDS
TTGTTGGTAAGATCTGAACT+AGG 0.660286 7_4:+37266958 None:intergenic
GGTCCCAAAAGATAAAGGGA+AGG 0.689863 7_4:-37267013 Msa1152080:CDS
GCTGGATGTTTCAAAACCAG+GGG 0.695479 7_4:-37268225 Msa1152080:CDS
ACTTCCAAAGTGGTACCGTG+TGG 0.714904 7_4:+37267446 None:intergenic
TGACAAGGATCAATCAACTG+TGG 0.723650 7_4:-37267034 Msa1152080:CDS
GCAGCAATTAAAGCTCCACA+CGG 0.760541 7_4:-37267461 Msa1152080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATAATAATAAAAAATA+AGG + chr7_4:37268164-37268183 None:intergenic 0.0%
!!! TTTTTATTTTTATTTTAAAA+AGG + chr7_4:37271434-37271453 None:intergenic 0.0%
!!! TGTTTTTTTTAATTTTAAAG+CGG + chr7_4:37268339-37268358 None:intergenic 10.0%
!! AATGAATAAAATAAAAACAA+AGG - chr7_4:37268864-37268883 Msa1152080:intron 10.0%
!! TAATTGAATTTGATAAATTA+AGG + chr7_4:37269463-37269482 None:intergenic 10.0%
!!! TTTTATTTTATTTTTTGACA+TGG + chr7_4:37271461-37271480 None:intergenic 10.0%
!!! TTTTTGACTTATATAATTTA+TGG - chr7_4:37272622-37272641 Msa1152080:intron 10.0%
!!! TCTTGTATATAAATTTATTT+TGG - chr7_4:37273097-37273116 Msa1152080:intron 10.0%
!! TCAATAATAAAAACAAACTT+GGG + chr7_4:37266653-37266672 None:intergenic 15.0%
!! TTCAATAATAAAAACAAACT+TGG + chr7_4:37266654-37266673 None:intergenic 15.0%
!!! TTTCTCTCTTTTTTTTTTAT+AGG - chr7_4:37266731-37266750 Msa1152080:intron 15.0%
!! TCTACATTTAAATGTTAAAA+AGG + chr7_4:37266848-37266867 None:intergenic 15.0%
!! AAAGTAAATCGAATATATTA+TGG - chr7_4:37267090-37267109 Msa1152080:intron 15.0%
!!! TTACTTTTTGTTAAAAAGTT+AGG - chr7_4:37267531-37267550 Msa1152080:intron 15.0%
!!! TACTTTTTGTTAAAAAGTTA+GGG - chr7_4:37267532-37267551 Msa1152080:intron 15.0%
!! ATTGTTAAGATAAATAAGTA+AGG - chr7_4:37267883-37267902 Msa1152080:intron 15.0%
!! TAATAACTTACCTAAATTTA+TGG - chr7_4:37267952-37267971 Msa1152080:intron 15.0%
!!! ACTCTTTTATTATATACAAA+TGG + chr7_4:37268036-37268055 None:intergenic 15.0%
!! ATAAGGTAAAATAAACATTT+CGG + chr7_4:37268147-37268166 None:intergenic 15.0%
!! TATTCCTTAAAATTAATAAG+TGG + chr7_4:37268488-37268507 None:intergenic 15.0%
!! ACACTATCAAAAAAAAATAT+TGG - chr7_4:37268532-37268551 Msa1152080:CDS 15.0%
!! CACTATCAAAAAAAAATATT+GGG - chr7_4:37268533-37268552 Msa1152080:CDS 15.0%
!! TGTATATTAGTAGAAAAATA+TGG - chr7_4:37268746-37268765 Msa1152080:intron 15.0%
!!! AAAATTGCAAATTTTCAAAT+GGG - chr7_4:37268786-37268805 Msa1152080:intron 15.0%
!! GAAAAATTGTAAACTAAATT+TGG - chr7_4:37269390-37269409 Msa1152080:intron 15.0%
!!! TCTTTGAATTTTTATTTTCA+AGG + chr7_4:37269421-37269440 None:intergenic 15.0%
!!! GATAAATTAAGGTTTTAATT+TGG + chr7_4:37269452-37269471 None:intergenic 15.0%
!! ATTTATCAAATTCAATTAGA+TGG - chr7_4:37269465-37269484 Msa1152080:intron 15.0%
!! TGTTAATTAATGATATATCA+TGG + chr7_4:37269537-37269556 None:intergenic 15.0%
!! AAATAATATAAATTGATGGA+AGG + chr7_4:37269580-37269599 None:intergenic 15.0%
!!! TTAAATTTTGTGATGAATTA+GGG + chr7_4:37270653-37270672 None:intergenic 15.0%
!! AAAATAAAATAAAAAGAGTC+AGG - chr7_4:37271467-37271486 Msa1152080:intron 15.0%
!! CAAATGTAATCATTATTAAA+TGG - chr7_4:37271573-37271592 Msa1152080:intron 15.0%
!! TGCATCTAAAAAAAAAAAAT+AGG - chr7_4:37271754-37271773 Msa1152080:intron 15.0%
!! AATTGAAAATTTAACAATTG+AGG - chr7_4:37272713-37272732 Msa1152080:intron 15.0%
!!! TTACTTTTTTTTATTATTGC+AGG - chr7_4:37272839-37272858 Msa1152080:intron 15.0%
!!! TACTTTTTTTTATTATTGCA+GGG - chr7_4:37272840-37272859 Msa1152080:intron 15.0%
!! AAATTATGAACATAAAAGTA+CGG + chr7_4:37272956-37272975 None:intergenic 15.0%
!!! ATGTTCATAATTTTACTTAA+AGG - chr7_4:37272963-37272982 Msa1152080:intron 15.0%
!!! AATTTATTTTGGATTTTAAC+TGG - chr7_4:37273108-37273127 Msa1152080:intron 15.0%
!! CAGATATATAATGAATTAAA+TGG + chr7_4:37274004-37274023 None:intergenic 15.0%
!! CAAAAACAAAAACAAAATTA+TGG + chr7_4:37274069-37274088 None:intergenic 15.0%
!! AAAAAAAGAGAGAAATCATT+AGG + chr7_4:37266726-37266745 None:intergenic 20.0%
!!! AAAGGTAGTATTTGAATTTT+AGG + chr7_4:37266830-37266849 None:intergenic 20.0%
!! ATACACAACATATTAAGAAA+TGG + chr7_4:37266992-37267011 None:intergenic 20.0%
!! ATTTGAGAAGATAATATGTA+TGG - chr7_4:37267131-37267150 Msa1152080:intron 20.0%
!!! CTTTCATAATAAGAATTTTG+TGG - chr7_4:37267468-37267487 Msa1152080:CDS 20.0%
!!! TCTAAGGTAGATATAATTAA+AGG - chr7_4:37267731-37267750 Msa1152080:intron 20.0%
!!! GTAGATATAATTAAAGGTAT+AGG - chr7_4:37267737-37267756 Msa1152080:intron 20.0%
!!! ATAATTAAAGGTATAGGAAT+AGG - chr7_4:37267743-37267762 Msa1152080:CDS 20.0%
!! GATATAATTGTTTATAAGCA+AGG - chr7_4:37267768-37267787 Msa1152080:CDS 20.0%
!! TAACAATTATATCTACCTAT+TGG + chr7_4:37267870-37267889 None:intergenic 20.0%
!!! TAAAAGAGTGTTTAGATATA+AGG - chr7_4:37268047-37268066 Msa1152080:intron 20.0%
!! TAAGGTAAAATAAACATTTC+GGG + chr7_4:37268146-37268165 None:intergenic 20.0%
!!! GACGGTATTAATTTTTATAA+TGG + chr7_4:37268315-37268334 None:intergenic 20.0%
!!! CATTCCACTTATTAATTTTA+AGG - chr7_4:37268481-37268500 Msa1152080:intron 20.0%
!!! CAAAATTGCAAATTTTCAAA+TGG - chr7_4:37268785-37268804 Msa1152080:intron 20.0%
!!! GTACGAATTTTATGATTTAA+AGG + chr7_4:37269161-37269180 None:intergenic 20.0%
!!! TCATTTTCCTATTCTATTTT+TGG - chr7_4:37269227-37269246 Msa1152080:intron 20.0%
!! TCTTTAACCAAAAATAGAAT+AGG + chr7_4:37269237-37269256 None:intergenic 20.0%
!! TATTTAAATGATATCTTGAG+AGG - chr7_4:37269595-37269614 Msa1152080:intron 20.0%
!! TACAAGAAAAGAAAAAAAGA+AGG + chr7_4:37269705-37269724 None:intergenic 20.0%
!! ACATGTTACATATATAAAAG+AGG - chr7_4:37269780-37269799 Msa1152080:intron 20.0%
!!! TTAAAGTCTTTTAATGATCA+TGG - chr7_4:37269823-37269842 Msa1152080:intron 20.0%
!!! GTTAAATTTTGTGATGAATT+AGG + chr7_4:37270654-37270673 None:intergenic 20.0%
!!! TTTGATAACATCTTATCATT+TGG + chr7_4:37271064-37271083 None:intergenic 20.0%
!!! TTTATGAAGTTTGATTTAAG+TGG + chr7_4:37271138-37271157 None:intergenic 20.0%
!! AAATTAAGTGCAAACTTATA+TGG - chr7_4:37271279-37271298 Msa1152080:intron 20.0%
!! TAAATTAGGAGCTTATATTA+GGG + chr7_4:37271335-37271354 None:intergenic 20.0%
!! ATAAATTAGGAGCTTATATT+AGG + chr7_4:37271336-37271355 None:intergenic 20.0%
!! TCAAATGTCACAAATAAATT+AGG + chr7_4:37271349-37271368 None:intergenic 20.0%
!! AATAATGATTACATTTGAGA+AGG + chr7_4:37271570-37271589 None:intergenic 20.0%
!! TTATTAAATGGTTTCACTTA+TGG - chr7_4:37271585-37271604 Msa1152080:intron 20.0%
!! ATGTAATTTAAAAGTGGAAT+AGG + chr7_4:37271671-37271690 None:intergenic 20.0%
!!! TATTCCACTTTTAAATTACA+TGG - chr7_4:37271670-37271689 Msa1152080:intron 20.0%
!! AAAAAAAATAGGTCACAAAT+TGG - chr7_4:37271765-37271784 Msa1152080:intron 20.0%
!! AGCTGAAATAATTTAATGAT+AGG + chr7_4:37271837-37271856 None:intergenic 20.0%
!!! AGAATTTTCTTTTTTTGAGA+GGG + chr7_4:37271861-37271880 None:intergenic 20.0%
!!! AAGAATTTTCTTTTTTTGAG+AGG + chr7_4:37271862-37271881 None:intergenic 20.0%
!! ATATTACTAATGTTCTTGAA+GGG - chr7_4:37272241-37272260 Msa1152080:intron 20.0%
!!! TCTTGAACTTTTTTTCTATA+AGG + chr7_4:37272272-37272291 None:intergenic 20.0%
!!! AAGGATTCATTTTTTATCTT+TGG - chr7_4:37272460-37272479 Msa1152080:intron 20.0%
!!! GTAAAGCATACTTTTTTATT+TGG - chr7_4:37272580-37272599 Msa1152080:intron 20.0%
!! TAATAGATCCTTATAAATGT+TGG - chr7_4:37272654-37272673 Msa1152080:intron 20.0%
!!! ATTTTTCCTTAATCCATATT+TGG - chr7_4:37272921-37272940 Msa1152080:intron 20.0%
!!! TTTTTCCTTAATCCATATTT+GGG - chr7_4:37272922-37272941 Msa1152080:intron 20.0%
!! TTCATTGTAATTCATAGATA+GGG + chr7_4:37273045-37273064 None:intergenic 20.0%
!! ATTCATTGTAATTCATAGAT+AGG + chr7_4:37273046-37273065 None:intergenic 20.0%
!!! TTACAATGAATATTTTGATG+TGG - chr7_4:37273055-37273074 Msa1152080:intron 20.0%
!! AATTTATATACAAGAAGCAA+AGG + chr7_4:37273092-37273111 None:intergenic 20.0%
!! TTTAAGAAAAAAACCTTTAC+TGG - chr7_4:37273904-37273923 Msa1152080:intron 20.0%
! CAAGTTAAAATAACCATGAA+AGG - chr7_4:37266571-37266590 Msa1152080:intron 25.0%
! ATTAAGAAATGGAGAATTGT+GGG + chr7_4:37266981-37267000 None:intergenic 25.0%
! TATTAAGAAATGGAGAATTG+TGG + chr7_4:37266982-37267001 None:intergenic 25.0%
!!! TTGTCTTTTGAAGAGTTTAA+CGG + chr7_4:37267025-37267044 None:intergenic 25.0%
! GAAAATGAAAAGCAAAAGAA+AGG + chr7_4:37267382-37267401 None:intergenic 25.0%
!!! ACTTTGAAATTACTCATACT+TGG - chr7_4:37267435-37267454 Msa1152080:CDS 25.0%
! TTACTCATACTTGGTTTAAT+TGG - chr7_4:37267444-37267463 Msa1152080:CDS 25.0%
!! ACAGTTGTTTCCATAAATTT+AGG + chr7_4:37267965-37267984 None:intergenic 25.0%
!!! AACTGTCTCTATTTCTTTTA+TGG - chr7_4:37267979-37267998 Msa1152080:intron 25.0%
! AAGGTAAAATAAACATTTCG+GGG + chr7_4:37268145-37268164 None:intergenic 25.0%
! CACATATATAAAAGAAGAGT+TGG + chr7_4:37268248-37268267 None:intergenic 25.0%
!!! TTTTAATTTTAAAGCGGTGA+CGG + chr7_4:37268333-37268352 None:intergenic 25.0%
! AGAAATAAAGATAGTTGTCT+CGG - chr7_4:37268397-37268416 Msa1152080:CDS 25.0%
!! ATTTAAAGGTGTGATGAAAA+TGG + chr7_4:37269147-37269166 None:intergenic 25.0%
! ACATACTTTAAACCTTCTAT+TGG + chr7_4:37269200-37269219 None:intergenic 25.0%
!!! TTTTTGGTTAAAGATTCAAG+TGG - chr7_4:37269243-37269262 Msa1152080:intron 25.0%
! ATGGAAAATTAGTTCAACTT+TGG - chr7_4:37269484-37269503 Msa1152080:intron 25.0%
!! AACGTTTGTTACACAAAATA+GGG + chr7_4:37269663-37269682 None:intergenic 25.0%
!! TAACGTTTGTTACACAAAAT+AGG + chr7_4:37269664-37269683 None:intergenic 25.0%
! TTTGAAAGAAGATCTCTTAA+TGG - chr7_4:37270147-37270166 Msa1152080:intron 25.0%
! GTCGTTGTAACTTTAAATTA+AGG + chr7_4:37270322-37270341 None:intergenic 25.0%
!! GGATTTTACGAAAAATTTGA+AGG - chr7_4:37270381-37270400 Msa1152080:intron 25.0%
! AGTCCTTACAAAAAATTGAA+TGG - chr7_4:37271083-37271102 Msa1152080:intron 25.0%
! GTCCTTACAAAAAATTGAAT+GGG - chr7_4:37271084-37271103 Msa1152080:intron 25.0%
! AAATGTGTATGAATAGAGTT+AGG - chr7_4:37271209-37271228 Msa1152080:intron 25.0%
! ACTTAATTTCATGCACTATA+TGG + chr7_4:37271268-37271287 None:intergenic 25.0%
!!! GAATATATATTGGCTTTATG+AGG + chr7_4:37271923-37271942 None:intergenic 25.0%
! GATATTACTAATGTTCTTGA+AGG - chr7_4:37272240-37272259 Msa1152080:intron 25.0%
!!! GTAAAAGTGTTTCAACATTT+TGG + chr7_4:37272356-37272375 None:intergenic 25.0%
! TAAACTAGCAAAACTATCAT+CGG + chr7_4:37272431-37272450 None:intergenic 25.0%
! ACATAAATGATTTACAGATC+AGG + chr7_4:37272546-37272565 None:intergenic 25.0%
! ATCAAACACCAACATTTATA+AGG + chr7_4:37272665-37272684 None:intergenic 25.0%
! ATATACTCTTACTAGACAAA+AGG + chr7_4:37272817-37272836 None:intergenic 25.0%
! AATACAAAACAAATATCCCA+CGG + chr7_4:37273761-37273780 None:intergenic 25.0%
!!! TTTTGTATTTGCAACTTGTT+AGG - chr7_4:37273772-37273791 Msa1152080:intron 25.0%
! AATGAATTAAATGGAGACTA+AGG + chr7_4:37273995-37274014 None:intergenic 25.0%
! ACCAAAATATATTTCAACGT+AGG - chr7_4:37274090-37274109 Msa1152080:intron 25.0%
!! TCCTACGTTGAAATATATTT+TGG + chr7_4:37274094-37274113 None:intergenic 25.0%
! ATTCAGCCAAAGTGTTTATA+TGG - chr7_4:37266544-37266563 Msa1152080:intron 30.0%
TGTGTACCATATAAACACTT+TGG + chr7_4:37266553-37266572 None:intergenic 30.0%
AACCATGAAAGGTAAAATTC+AGG - chr7_4:37266582-37266601 Msa1152080:intron 30.0%
TTAAAAATGACGTATCCAGT+AGG - chr7_4:37266897-37266916 Msa1152080:CDS 30.0%
GAGAAGATAATATGTATGGT+AGG - chr7_4:37267135-37267154 Msa1152080:intron 30.0%
ATAACCCAAAAAAAACACAG+TGG + chr7_4:37267204-37267223 None:intergenic 30.0%
!!! TGTGTTTTTTTTGGGTTATG+AGG - chr7_4:37267205-37267224 Msa1152080:CDS 30.0%
!!! GTGTTTTTTTTGGGTTATGA+GGG - chr7_4:37267206-37267225 Msa1152080:CDS 30.0%
AAAACAGTAGCAGTGAAATA+GGG - chr7_4:37267508-37267527 Msa1152080:intron 30.0%
!! ACATGTGTTGACTAATGTAA+TGG + chr7_4:37267581-37267600 None:intergenic 30.0%
TATATGATGAAAGTTTCTCG+GGG + chr7_4:37267844-37267863 None:intergenic 30.0%
GTATATGATGAAAGTTTCTC+GGG + chr7_4:37267845-37267864 None:intergenic 30.0%
GGTATATGATGAAAGTTTCT+CGG + chr7_4:37267846-37267865 None:intergenic 30.0%
TTTCATCATATACCTCCAAT+AGG - chr7_4:37267852-37267871 Msa1152080:intron 30.0%
CAATTATATCTACCTATTGG+AGG + chr7_4:37267867-37267886 None:intergenic 30.0%
! AGAGTGTTTAGATATAAGGA+CGG - chr7_4:37268051-37268070 Msa1152080:intron 30.0%
AGACCAAATGTATAGTGTTT+AGG + chr7_4:37268210-37268229 None:intergenic 30.0%
TCAACTGTGTCATGTATTAT+GGG + chr7_4:37268588-37268607 None:intergenic 30.0%
CTAATCCAATTTAAGCTTTG+AGG - chr7_4:37269000-37269019 Msa1152080:intron 30.0%
TTTCACATGAGGATCAAAAT+TGG - chr7_4:37269075-37269094 Msa1152080:intron 30.0%
TTCACATGAGGATCAAAATT+GGG - chr7_4:37269076-37269095 Msa1152080:intron 30.0%
TTAACAACTATCAACTACCT+TGG - chr7_4:37269551-37269570 Msa1152080:intron 30.0%
ATATCTTGAGAGGTTAAAAG+AGG - chr7_4:37269605-37269624 Msa1152080:intron 30.0%
TATCTTGAGAGGTTAAAAGA+GGG - chr7_4:37269606-37269625 Msa1152080:intron 30.0%
TTTGTGTAACAAACGTTAGT+AGG - chr7_4:37269666-37269685 Msa1152080:intron 30.0%
! TCTTTTCTTGTAGTGAATGT+TGG - chr7_4:37269713-37269732 Msa1152080:intron 30.0%
TGTAGTGAATGTTGGAATTT+AGG - chr7_4:37269721-37269740 Msa1152080:intron 30.0%
! TGAATGTTGGAATTTAGGTT+TGG - chr7_4:37269726-37269745 Msa1152080:intron 30.0%
GGTTAAGTCTCGTATTAATT+AGG - chr7_4:37269750-37269769 Msa1152080:intron 30.0%
TCTCGTATTAATTAGGAATG+AGG - chr7_4:37269757-37269776 Msa1152080:intron 30.0%
TTTAATGATCATGGATGTCT+AGG - chr7_4:37269832-37269851 Msa1152080:intron 30.0%
ATCCTTATCTTAGACAAGTA+AGG + chr7_4:37270365-37270384 None:intergenic 30.0%
TAGTTATTCTATAGTCGTAG+AGG - chr7_4:37270683-37270702 Msa1152080:intron 30.0%
ATTTACACGAGCTTCAATAT+GGG + chr7_4:37270830-37270849 None:intergenic 30.0%
TCAAGTATTCACACTTCTAT+TGG - chr7_4:37270978-37270997 Msa1152080:intron 30.0%
!!! TGCCCATTCAATTTTTTGTA+AGG + chr7_4:37271089-37271108 None:intergenic 30.0%
CTATGCATTTATACCTTTGA+TGG + chr7_4:37271410-37271429 None:intergenic 30.0%
CACTTTAATAAAACAAGCAG+AGG - chr7_4:37272075-37272094 Msa1152080:intron 30.0%
TTAATAAAACAAGCAGAGGA+TGG - chr7_4:37272079-37272098 Msa1152080:intron 30.0%
TGGTCAATTATCAAAGGAAT+TGG + chr7_4:37272378-37272397 None:intergenic 30.0%
! AATTCCTTTGATAATTGACC+AGG - chr7_4:37272377-37272396 Msa1152080:intron 30.0%
! ATTCCTTTGATAATTGACCA+GGG - chr7_4:37272378-37272397 Msa1152080:intron 30.0%
!! TGATAGTTTTGCTAGTTTAC+AGG - chr7_4:37272432-37272451 Msa1152080:intron 30.0%
!! TGTTTTTGTTTCTCATATGC+AGG - chr7_4:37272686-37272705 Msa1152080:intron 30.0%
TTGGATGAACAAATAAGGTT+TGG - chr7_4:37272744-37272763 Msa1152080:intron 30.0%
TGGATGAACAAATAAGGTTT+GGG - chr7_4:37272745-37272764 Msa1152080:intron 30.0%
! AATGACCCAAATATGGATTA+AGG + chr7_4:37272930-37272949 None:intergenic 30.0%
! CAAATTCCCTTTTTCCTATT+AGG - chr7_4:37273281-37273300 Msa1152080:intron 30.0%
TAACAAGGTAAACATCCATT+GGG + chr7_4:37273365-37273384 None:intergenic 30.0%
! TTTGCTATCATTTGCTTCAA+AGG - chr7_4:37273408-37273427 Msa1152080:intron 30.0%
TCTCTTCAAATTGACTACAA+TGG + chr7_4:37273536-37273555 None:intergenic 30.0%
TCAATTTGAAGAGAAGTTTG+AGG - chr7_4:37273542-37273561 Msa1152080:intron 30.0%
! TTTCCTTCCCTTTATCTTTT+GGG + chr7_4:37273620-37273639 None:intergenic 30.0%
! ATTTCCTTCCCTTTATCTTT+TGG + chr7_4:37273621-37273640 None:intergenic 30.0%
! AAGATAACACCTTCAGATTT+TGG + chr7_4:37273826-37273845 None:intergenic 30.0%
!!! TTGCATGTTTTTTGTTGTGA+AGG - chr7_4:37273863-37273882 Msa1152080:intron 30.0%
TCCAGTAGGTATAACTCTTA+TGG - chr7_4:37266911-37266930 Msa1152080:CDS 35.0%
ACCATAAGAGTTATACCTAC+TGG + chr7_4:37266915-37266934 None:intergenic 35.0%
! AAAAAAACACAGTGGCTTGT+GGG + chr7_4:37267196-37267215 None:intergenic 35.0%
AAAAAAAACACAGTGGCTTG+TGG + chr7_4:37267197-37267216 None:intergenic 35.0%
!!! ACAAGCCACTGTGTTTTTTT+TGG - chr7_4:37267196-37267215 Msa1152080:CDS 35.0%
!!! CAAGCCACTGTGTTTTTTTT+GGG - chr7_4:37267197-37267216 Msa1152080:CDS 35.0%
!! TCTTTGTTGTTCCGTTCTAA+CGG - chr7_4:37267278-37267297 Msa1152080:CDS 35.0%
AATTTGAAGAGTTCCTGGAT+GGG + chr7_4:37267356-37267375 None:intergenic 35.0%
GAAAACAGTAGCAGTGAAAT+AGG - chr7_4:37267507-37267526 Msa1152080:intron 35.0%
ATCGACAGCGTAAAAATGTT+TGG + chr7_4:37267686-37267705 None:intergenic 35.0%
TTCACCTTGTATGACTTCTA+AGG - chr7_4:37267715-37267734 Msa1152080:intron 35.0%
TCTACCTTAGAAGTCATACA+AGG + chr7_4:37267722-37267741 None:intergenic 35.0%
TTGTTTATAAGCAAGGAGTG+TGG - chr7_4:37267775-37267794 Msa1152080:intron 35.0%
ACAAATGGTGCTTACATACA+TGG + chr7_4:37268021-37268040 None:intergenic 35.0%
AGACCAAATGCATAGTGTTT+AGG - chr7_4:37268096-37268115 Msa1152080:intron 35.0%
GTGCCTAAACACTATACATT+TGG - chr7_4:37268204-37268223 Msa1152080:CDS 35.0%
!! AAAGAAGAGTTGGTCTTGTA+TGG + chr7_4:37268238-37268257 None:intergenic 35.0%
TTAGCTCAACTCAATTGGTA+AGG - chr7_4:37268420-37268439 Msa1152080:intron 35.0%
!!! CGGAGGAAGTAGTTTTTTTT+TGG + chr7_4:37268564-37268583 None:intergenic 35.0%
GTCAACTGTGTCATGTATTA+TGG + chr7_4:37268589-37268608 None:intergenic 35.0%
!! AAGCATTGACATGCGTAATA+GGG + chr7_4:37268611-37268630 None:intergenic 35.0%
!! TAAGCATTGACATGCGTAAT+AGG + chr7_4:37268612-37268631 None:intergenic 35.0%
ATGGGTCATATATCGTAGAA+CGG - chr7_4:37268804-37268823 Msa1152080:intron 35.0%
! TGATGATTTGCACCTAGATT+TGG - chr7_4:37268944-37268963 Msa1152080:intron 35.0%
CTCTAAGTTTGACCAAATCT+AGG + chr7_4:37268959-37268978 None:intergenic 35.0%
CTAAGCCTCAAAGCTTAAAT+TGG + chr7_4:37269008-37269027 None:intergenic 35.0%
!! ATTTAAGCTTTGAGGCTTAG+TGG - chr7_4:37269008-37269027 Msa1152080:intron 35.0%
!! TTTAAGCTTTGAGGCTTAGT+GGG - chr7_4:37269009-37269028 Msa1152080:intron 35.0%
CTCATGTGAAACAACTTTAG+TGG + chr7_4:37269066-37269085 None:intergenic 35.0%
! CACTAAAGTTGTTTCACATG+AGG - chr7_4:37269064-37269083 Msa1152080:intron 35.0%
! AAAATTGGGAGTATGTTCCA+CGG - chr7_4:37269090-37269109 Msa1152080:intron 35.0%
! TGATGAAAATGGAGGAGTAT+AGG + chr7_4:37269136-37269155 None:intergenic 35.0%
! TAAAGGTGTGATGAAAATGG+AGG + chr7_4:37269144-37269163 None:intergenic 35.0%
!!! GTTTTGAGAGATCCAATAGA+AGG - chr7_4:37269185-37269204 Msa1152080:intron 35.0%
!!! AGAGGGTTGTTTTTCATGTT+TGG - chr7_4:37269623-37269642 Msa1152080:intron 35.0%
TAACAAACGTTAGTAGGTGA+TGG - chr7_4:37269672-37269691 Msa1152080:intron 35.0%
! ATGTTGGAATTTAGGTTTGG+TGG - chr7_4:37269729-37269748 Msa1152080:intron 35.0%
CGTTAAGTCTCATATCAACT+AGG - chr7_4:37269952-37269971 Msa1152080:intron 35.0%
ACACTTAACGGAGAAATTGT+TGG - chr7_4:37269990-37270009 Msa1152080:intron 35.0%
! CTCACACTGATTATGAATAG+AGG - chr7_4:37270036-37270055 Msa1152080:intron 35.0%
! AATTGCATTTTCATGAGCGT+TGG - chr7_4:37270285-37270304 Msa1152080:intron 35.0%
ACACGTTGTGCTCAAAAATA+AGG + chr7_4:37270509-37270528 None:intergenic 35.0%
AATATCTCTGAACCATACAG+CGG + chr7_4:37270582-37270601 None:intergenic 35.0%
ATTCTATAGTCGTAGAGGTT+AGG - chr7_4:37270688-37270707 Msa1152080:intron 35.0%
TTGGCTAAACTATCTGAACA+AGG - chr7_4:37270716-37270735 Msa1152080:intron 35.0%
CATTTACACGAGCTTCAATA+TGG + chr7_4:37270831-37270850 None:intergenic 35.0%
ATTGAAGCTCGTGTAAATGA+TGG - chr7_4:37270832-37270851 Msa1152080:intron 35.0%
! CTGTGAATGATGAAAGCATA+TGG - chr7_4:37270863-37270882 Msa1152080:intron 35.0%
AGTATTCACACTTCTATTGG+TGG - chr7_4:37270981-37271000 Msa1152080:intron 35.0%
!! TTTCGCATCAAAAGCACTTT+CGG + chr7_4:37271168-37271187 None:intergenic 35.0%
TTGTGACATTTGATCACCTT+TGG - chr7_4:37271356-37271375 Msa1152080:intron 35.0%
!! ATAAGAGGCATTTCCATCAA+AGG - chr7_4:37271394-37271413 Msa1152080:intron 35.0%
TAAAAAGAGTCAGGTGAGTT+AGG - chr7_4:37271476-37271495 Msa1152080:intron 35.0%
AAAAGTGGAATAGGACAACT+TGG + chr7_4:37271662-37271681 None:intergenic 35.0%
AGCGCCATGTAATTTAAAAG+TGG + chr7_4:37271677-37271696 None:intergenic 35.0%
!!! TGATGAGCTTTTTTGTCAAC+AGG + chr7_4:37272057-37272076 None:intergenic 35.0%
AAAGATTCCTTGCTCATTAC+TGG - chr7_4:37272159-37272178 Msa1152080:intron 35.0%
AAACATTCCAGTAATGAGCA+AGG + chr7_4:37272169-37272188 None:intergenic 35.0%
ACTAATGTTCTTGAAGGGAT+TGG - chr7_4:37272246-37272265 Msa1152080:intron 35.0%
AGTTCAAGAACAGAATTCAG+TGG - chr7_4:37272283-37272302 Msa1152080:intron 35.0%
!! GTTTTGCTAGTTTACAGGTT+AGG - chr7_4:37272437-37272456 Msa1152080:intron 35.0%
ATTTAACAATTGAGGAACGC+CGG - chr7_4:37272721-37272740 Msa1152080:intron 35.0%
! ACCTTATTTGTTCATCCAAC+CGG + chr7_4:37272743-37272762 None:intergenic 35.0%
CAACAAAGAAGAATCAGCAA+AGG + chr7_4:37272777-37272796 None:intergenic 35.0%
! AAGGTTTCTTTTTGTCACTG+AGG - chr7_4:37272982-37273001 Msa1152080:intron 35.0%
! AGCTTTAATTGCTGCTATGA+AGG + chr7_4:37273161-37273180 None:intergenic 35.0%
TAAATTACCTCATCAGGATC+AGG + chr7_4:37273208-37273227 None:intergenic 35.0%
TCCTGATGAGGTAATTTAAG+AGG - chr7_4:37273210-37273229 Msa1152080:intron 35.0%
TCCTCTTAAATTACCTCATC+AGG + chr7_4:37273214-37273233 None:intergenic 35.0%
CAACAGCCTAATAGGAAAAA+GGG + chr7_4:37273290-37273309 None:intergenic 35.0%
TCAACAGCCTAATAGGAAAA+AGG + chr7_4:37273291-37273310 None:intergenic 35.0%
! ATAGTCTTGAGAAGCACAAT+GGG - chr7_4:37273339-37273358 Msa1152080:intron 35.0%
CTAACAAGGTAAACATCCAT+TGG + chr7_4:37273366-37273385 None:intergenic 35.0%
CAATGGATGTTTACCTTGTT+AGG - chr7_4:37273364-37273383 Msa1152080:intron 35.0%
!! TTAGGTACCGTATGCTTTTT+GGG - chr7_4:37273382-37273401 Msa1152080:intron 35.0%
! CAAAACACCCAAAAAGCATA+CGG + chr7_4:37273392-37273411 None:intergenic 35.0%
CTATCATTTGCTTCAAAGGT+CGG - chr7_4:37273412-37273431 Msa1152080:intron 35.0%
! TTGTTGGTAAGATCTGAACT+AGG + chr7_4:37273672-37273691 None:intergenic 35.0%
CATCAGATAAAAGCCAGTAA+AGG + chr7_4:37273920-37273939 None:intergenic 35.0%
! CGCCTGAATTTTACCTTTCA+TGG + chr7_4:37266587-37266606 None:intergenic 40.0%
! AAAAAACACAGTGGCTTGTG+GGG + chr7_4:37267195-37267214 None:intergenic 40.0%
!! CTTTGTTGTTCCGTTCTAAC+GGG - chr7_4:37267279-37267298 Msa1152080:CDS 40.0%
!! TTTGTTGTTCCGTTCTAACG+GGG - chr7_4:37267280-37267299 Msa1152080:CDS 40.0%
ATTTGAAGAGTTCCTGGATG+GGG + chr7_4:37267355-37267374 None:intergenic 40.0%
GAATTTGAAGAGTTCCTGGA+TGG + chr7_4:37267357-37267376 None:intergenic 40.0%
GGAAGAATTTGAAGAGTTCC+TGG + chr7_4:37267361-37267380 None:intergenic 40.0%
ATGGTGCTTACATACATGGA+CGG + chr7_4:37268017-37268036 None:intergenic 40.0%
CTGTGTCATGTATTATGGGA+CGG + chr7_4:37268584-37268603 None:intergenic 40.0%
GTCATATATCGTAGAACGGA+GGG - chr7_4:37268808-37268827 Msa1152080:intron 40.0%
TCACATGTAAAAGAGACAGC+AGG - chr7_4:37268911-37268930 Msa1152080:intron 40.0%
!! TTAAGCTTTGAGGCTTAGTG+GGG - chr7_4:37269010-37269029 Msa1152080:intron 40.0%
GGGAGGCAATGATTAGATAA+TGG - chr7_4:37269031-37269050 Msa1152080:intron 40.0%
! AAATTGGGAGTATGTTCCAC+GGG - chr7_4:37269091-37269110 Msa1152080:intron 40.0%
TATAGGAGGGCCCATTATAA+GGG + chr7_4:37269119-37269138 None:intergenic 40.0%
! GAAAATGGAGGAGTATAGGA+GGG + chr7_4:37269132-37269151 None:intergenic 40.0%
! TGAAAATGGAGGAGTATAGG+AGG + chr7_4:37269133-37269152 None:intergenic 40.0%
AAATTGATGGAAGGTCACCA+AGG + chr7_4:37269571-37269590 None:intergenic 40.0%
TCACTAACTTGATCCACACT+AGG + chr7_4:37269883-37269902 None:intergenic 40.0%
TGTGGATCAAGTTAGTGATG+TGG - chr7_4:37269885-37269904 Msa1152080:intron 40.0%
GTGGATCAAGTTAGTGATGT+GGG - chr7_4:37269886-37269905 Msa1152080:intron 40.0%
CATGAGTGACTCACACTTAA+CGG - chr7_4:37269978-37269997 Msa1152080:intron 40.0%
GACCTACACGTCATTATGTA+GGG - chr7_4:37270339-37270358 Msa1152080:intron 40.0%
! GGCCTTACTTGTCTAAGATA+AGG - chr7_4:37270360-37270379 Msa1152080:intron 40.0%
GGTCATGTTGAATGAAGGAT+GGG + chr7_4:37270414-37270433 None:intergenic 40.0%
AGGTCATGTTGAATGAAGGA+TGG + chr7_4:37270415-37270434 None:intergenic 40.0%
ACACAGGTCATGTTGAATGA+AGG + chr7_4:37270419-37270438 None:intergenic 40.0%
ATATCTCTGAACCATACAGC+GGG + chr7_4:37270581-37270600 None:intergenic 40.0%
! CTCGTGTAAATGATGGAAGT+AGG - chr7_4:37270839-37270858 Msa1152080:intron 40.0%
TTTGACAAAGCACACAAGCA+AGG + chr7_4:37270953-37270972 None:intergenic 40.0%
TGCCTCTTATGTTTGTCTGA+GGG + chr7_4:37271384-37271403 None:intergenic 40.0%
ATGCCTCTTATGTTTGTCTG+AGG + chr7_4:37271385-37271404 None:intergenic 40.0%
AATTACATGGCGCTATCTGT+CGG - chr7_4:37271683-37271702 Msa1152080:intron 40.0%
TCAACTCCCAGCTTATGATT+TGG - chr7_4:37271882-37271901 Msa1152080:intron 40.0%
TCTGGTCCAAATCATAAGCT+GGG + chr7_4:37271891-37271910 None:intergenic 40.0%
! TTTATGAGGCGTCATTTGTC+TGG + chr7_4:37271909-37271928 None:intergenic 40.0%
TAATGCTGCTGACACATTAG+AGG - chr7_4:37272117-37272136 Msa1152080:intron 40.0%
TGAGCAAGGAATCTTTAGAC+AGG + chr7_4:37272155-37272174 None:intergenic 40.0%
! CATGAAGCTTTTGTGTCTAC+AGG - chr7_4:37272197-37272216 Msa1152080:intron 40.0%
AGAACAGAATTCAGTGGAAG+TGG - chr7_4:37272289-37272308 Msa1152080:intron 40.0%
GAACAGAATTCAGTGGAAGT+GGG - chr7_4:37272290-37272309 Msa1152080:intron 40.0%
TGCTGGATGTTTCAAAACCA+GGG - chr7_4:37272401-37272420 Msa1152080:intron 40.0%
! TGCTAGTTTACAGGTTAGGA+AGG - chr7_4:37272441-37272460 Msa1152080:intron 40.0%
ACGGCAAAATGACCCAAATA+TGG + chr7_4:37272937-37272956 None:intergenic 40.0%
CATAGATAGGGAAACTAACC+TGG + chr7_4:37273033-37273052 None:intergenic 40.0%
GAAGGTTTCATTCTGGCAAT+AGG + chr7_4:37273143-37273162 None:intergenic 40.0%
CTGCTATGAAGGTTTCATTC+TGG + chr7_4:37273150-37273169 None:intergenic 40.0%
GGGATAATCAACAGCCTAAT+AGG + chr7_4:37273298-37273317 None:intergenic 40.0%
CTGTATCTGTATCTTCTCTG+GGG + chr7_4:37273318-37273337 None:intergenic 40.0%
CCTGTATCTGTATCTTCTCT+GGG + chr7_4:37273319-37273338 None:intergenic 40.0%
TCCTGTATCTGTATCTTCTC+TGG + chr7_4:37273320-37273339 None:intergenic 40.0%
! GATAGTCTTGAGAAGCACAA+TGG - chr7_4:37273338-37273357 Msa1152080:intron 40.0%
AAAGCATACGGTACCTAACA+AGG + chr7_4:37273380-37273399 None:intergenic 40.0%
!! GTTAGGTACCGTATGCTTTT+TGG - chr7_4:37273381-37273400 Msa1152080:intron 40.0%
CGGTCATTTAGCTATTGCAA+TGG - chr7_4:37273432-37273451 Msa1152080:intron 40.0%
TCAAGCATCATCGCTTCATA+TGG + chr7_4:37273462-37273481 None:intergenic 40.0%
GACTACAATGGCAGTGAAAA+GGG + chr7_4:37273524-37273543 None:intergenic 40.0%
TGACTACAATGGCAGTGAAA+AGG + chr7_4:37273525-37273544 None:intergenic 40.0%
GATTGATCCTTGTCAACTTC+TGG + chr7_4:37273588-37273607 None:intergenic 40.0%
TGACAAGGATCAATCAACTG+TGG - chr7_4:37273593-37273612 Msa1152080:intron 40.0%
ACTGTGGTCCCAAAAGATAA+AGG - chr7_4:37273609-37273628 Msa1152080:intron 40.0%
CTGTGGTCCCAAAAGATAAA+GGG - chr7_4:37273610-37273629 Msa1152080:intron 40.0%
ATGCTTACAGCAACATCTGA+AGG + chr7_4:37273729-37273748 None:intergenic 40.0%
!! CTTCAGATTTTGGTACTCTG+TGG + chr7_4:37273816-37273835 None:intergenic 40.0%
! CACAGAGTACCAAAATCTGA+AGG - chr7_4:37273814-37273833 Msa1152080:intron 40.0%
! CATGTCGGTTATGCTAACAT+CGG + chr7_4:37273943-37273962 None:intergenic 40.0%
ATGTTAGCATAACCGACATG+TGG - chr7_4:37273943-37273962 Msa1152080:intron 40.0%
! CTTCCAAACCTCTTCTCTTT+TGG + chr7_4:37274044-37274063 None:intergenic 40.0%
TGTATGGTAGGACATGTGAG+TGG - chr7_4:37267147-37267166 Msa1152080:intron 45.0%
CAGACAAATCCCCGTTAGAA+CGG + chr7_4:37267292-37267311 None:intergenic 45.0%
! TATAAGCAAGGAGTGTGGAC+AGG - chr7_4:37267780-37267799 Msa1152080:intron 45.0%
ACAACATCGACATCCCAACT+AGG - chr7_4:37267812-37267831 Msa1152080:intron 45.0%
GCGCCTAAACACTATGCATT+TGG + chr7_4:37268102-37268121 None:intergenic 45.0%
! CTCGGTTAGCTCAACTCAAT+TGG - chr7_4:37268415-37268434 Msa1152080:intron 45.0%
TGTCATGTATTATGGGACGG+AGG + chr7_4:37268581-37268600 None:intergenic 45.0%
GGTCATATATCGTAGAACGG+AGG - chr7_4:37268807-37268826 Msa1152080:intron 45.0%
!! TAAGCTTTGAGGCTTAGTGG+GGG - chr7_4:37269011-37269030 Msa1152080:intron 45.0%
TTCCACGGGTACCCTTATAA+TGG - chr7_4:37269105-37269124 Msa1152080:intron 45.0%
TCCACGGGTACCCTTATAAT+GGG - chr7_4:37269106-37269125 Msa1152080:intron 45.0%
GTATAGGAGGGCCCATTATA+AGG + chr7_4:37269120-37269139 None:intergenic 45.0%
TGATCATGGATGTCTAGGCT+CGG - chr7_4:37269837-37269856 Msa1152080:intron 45.0%
CTTGATCCACACTAGGATTC+TGG + chr7_4:37269876-37269895 None:intergenic 45.0%
TGTTGGAATTCAAGTGCGAG+TGG - chr7_4:37270007-37270026 Msa1152080:intron 45.0%
CGACCTACACGTCATTATGT+AGG - chr7_4:37270338-37270357 Msa1152080:intron 45.0%
GTTTGTTCAAAGTCCTTGCG+CGG + chr7_4:37270484-37270503 None:intergenic 45.0%
TATCTCTGAACCATACAGCG+GGG + chr7_4:37270580-37270599 None:intergenic 45.0%
TCGTAGAGGTTAGGCTTCAT+TGG - chr7_4:37270697-37270716 Msa1152080:intron 45.0%
CACGAGCTTCAATATGGGTA+TGG + chr7_4:37270825-37270844 None:intergenic 45.0%
! GCGCAAAGTTGTGCAGTTTT+GGG - chr7_4:37270896-37270915 Msa1152080:intron 45.0%
CACTATATGGCCATCGTTGA+AGG + chr7_4:37271255-37271274 None:intergenic 45.0%
TCCCCTCAGACAAACATAAG+AGG - chr7_4:37271379-37271398 Msa1152080:intron 45.0%
GCCTCTTATGTTTGTCTGAG+GGG + chr7_4:37271383-37271402 None:intergenic 45.0%
ATTACATGGCGCTATCTGTC+GGG - chr7_4:37271684-37271703 Msa1152080:intron 45.0%
GTCTGGTCCAAATCATAAGC+TGG + chr7_4:37271892-37271911 None:intergenic 45.0%
TGTGTCTACAGGTGCAAAAG+AGG - chr7_4:37272208-37272227 Msa1152080:intron 45.0%
GCACCCTGGTCAATTATCAA+AGG + chr7_4:37272384-37272403 None:intergenic 45.0%
! TTGATAATTGACCAGGGTGC+TGG - chr7_4:37272384-37272403 Msa1152080:intron 45.0%
!!! TTTTGAAACATCCAGCACCC+TGG + chr7_4:37272398-37272417 None:intergenic 45.0%
GTGCTGGATGTTTCAAAACC+AGG - chr7_4:37272400-37272419 Msa1152080:intron 45.0%
GCTGGATGTTTCAAAACCAG+GGG - chr7_4:37272402-37272421 Msa1152080:intron 45.0%
GCCGGTTGGATGAACAAATA+AGG - chr7_4:37272739-37272758 Msa1152080:intron 45.0%
GGGAGATGCAAGAAAGACTA+CGG - chr7_4:37272860-37272879 Msa1152080:intron 45.0%
GCAGCAATTAAAGCTCCACA+CGG - chr7_4:37273166-37273185 Msa1152080:intron 45.0%
AGGATCAGGTACTTCCAAAG+TGG + chr7_4:37273194-37273213 None:intergenic 45.0%
CCCAGAGAAGATACAGATAC+AGG - chr7_4:37273316-37273335 Msa1152080:intron 45.0%
! TCTGGACTGGGTGGAAATTT+GGG + chr7_4:37273570-37273589 None:intergenic 45.0%
! TTCTGGACTGGGTGGAAATT+TGG + chr7_4:37273571-37273590 None:intergenic 45.0%
TCCTTGTCAACTTCTGGACT+GGG + chr7_4:37273582-37273601 None:intergenic 45.0%
ATCCTTGTCAACTTCTGGAC+TGG + chr7_4:37273583-37273602 None:intergenic 45.0%
GGTCCCAAAAGATAAAGGGA+AGG - chr7_4:37273614-37273633 Msa1152080:intron 45.0%
! GGAAGGAAATAGAAGTGCAG+AGG - chr7_4:37273631-37273650 Msa1152080:intron 45.0%
! ATAGAAGTGCAGAGGCAAGA+TGG - chr7_4:37273639-37273658 Msa1152080:intron 45.0%
ACTCACGAAGTCGTGATTGT+TGG + chr7_4:37273688-37273707 None:intergenic 45.0%
AACAATCACGACTTCGTGAG+TGG - chr7_4:37273687-37273706 Msa1152080:intron 45.0%
ACAATCACGACTTCGTGAGT+GGG - chr7_4:37273688-37273707 Msa1152080:intron 45.0%
! AACAAATATCCCACGGACTG+AGG + chr7_4:37273754-37273773 None:intergenic 45.0%
ACGTTCTGTTCTCCACATGT+CGG + chr7_4:37273958-37273977 None:intergenic 45.0%
CATACACGCCAAAAGAGAAG+AGG - chr7_4:37274033-37274052 Msa1152080:intron 45.0%
ACGCCAAAAGAGAAGAGGTT+TGG - chr7_4:37274038-37274057 Msa1152080:intron 45.0%
!!! AGAATTTATTTAATTTTATT+TGG - chr7_4:37269303-37269322 Msa1152080:intron 5.0%
!! ATTTAAATAATATAAATTGA+TGG + chr7_4:37269584-37269603 None:intergenic 5.0%
!! AAAAAAATTTATTAAAGATA+TGG - chr7_4:37270100-37270119 Msa1152080:intron 5.0%
!! TAAATAAAAAAATATTTAAG+AGG + chr7_4:37270211-37270230 None:intergenic 5.0%
!! NNNNNNNNTTGAATATATAT+TGG + chr7_4:37271933-37271952 None:intergenic 5.0%
TGTGAGTGGTGTGGTGCTTA+TGG - chr7_4:37267161-37267180 Msa1152080:CDS 50.0%
CTAACGGGGATTTGTCTGCT+TGG - chr7_4:37267294-37267313 Msa1152080:CDS 50.0%
! GGGATTTGTCTGCTTGGTGA+TGG - chr7_4:37267300-37267319 Msa1152080:CDS 50.0%
GGAGCAAAGAAGAGCAGAGT+GGG + chr7_4:37267329-37267348 None:intergenic 50.0%
CATCGACATCCCAACTAGGT+TGG - chr7_4:37267816-37267835 Msa1152080:intron 50.0%
ATGGGACCAGAATCCTAGTG+TGG - chr7_4:37269867-37269886 Msa1152080:intron 50.0%
GGCCCTACATAATGACGTGT+AGG + chr7_4:37270344-37270363 None:intergenic 50.0%
! ACATGACCTGTGTCGATCCA+CGG - chr7_4:37270426-37270445 Msa1152080:intron 50.0%
ATCTCTGAACCATACAGCGG+GGG + chr7_4:37270579-37270598 None:intergenic 50.0%
AACTGCACAACTTTGCGCGT+TGG + chr7_4:37270894-37270913 None:intergenic 50.0%
! CGCGCAAAGTTGTGCAGTTT+TGG - chr7_4:37270895-37270914 Msa1152080:intron 50.0%
AACTTCCCAGCCTTCAACGA+TGG - chr7_4:37271242-37271261 Msa1152080:intron 50.0%
TATGGCCATCGTTGAAGGCT+GGG + chr7_4:37271250-37271269 None:intergenic 50.0%
ATATGGCCATCGTTGAAGGC+TGG + chr7_4:37271251-37271270 None:intergenic 50.0%
AACGAGTGTGGTGGCTACAA+GGG + chr7_4:37271307-37271326 None:intergenic 50.0%
TAACGAGTGTGGTGGCTACA+AGG + chr7_4:37271308-37271327 None:intergenic 50.0%
TTGTAGCCACCACACTCGTT+AGG - chr7_4:37271307-37271326 Msa1152080:intron 50.0%
TGTAGCCACCACACTCGTTA+GGG - chr7_4:37271308-37271327 Msa1152080:intron 50.0%
TGTTTGTCTGAGGGGACCAA+AGG + chr7_4:37271375-37271394 None:intergenic 50.0%
AAGAGTCAGGTGAGTTAGGC+TGG - chr7_4:37271480-37271499 Msa1152080:intron 50.0%
TTACATGGCGCTATCTGTCG+GGG - chr7_4:37271685-37271704 Msa1152080:intron 50.0%
GTCTACAGGTGCAAAAGAGG+AGG - chr7_4:37272211-37272230 Msa1152080:intron 50.0%
GGATGTTTCAAAACCAGGGG+AGG - chr7_4:37272405-37272424 Msa1152080:intron 50.0%
AACAATTGAGGAACGCCGGT+TGG - chr7_4:37272725-37272744 Msa1152080:intron 50.0%
AAAGAACTTGCCCTGCTTCC+AGG - chr7_4:37273012-37273031 Msa1152080:intron 50.0%
GGGAAACTAACCTGGAAGCA+GGG + chr7_4:37273025-37273044 None:intergenic 50.0%
AGGGAAACTAACCTGGAAGC+AGG + chr7_4:37273026-37273045 None:intergenic 50.0%
ACTTCCAAAGTGGTACCGTG+TGG + chr7_4:37273184-37273203 None:intergenic 50.0%
!! GGAAGTACCTGATCCTGATG+AGG - chr7_4:37273198-37273217 Msa1152080:intron 50.0%
! TTGTCAACTTCTGGACTGGG+TGG + chr7_4:37273579-37273598 None:intergenic 50.0%
ACCCAGTCCAGAAGTTGACA+AGG - chr7_4:37273578-37273597 Msa1152080:intron 50.0%
TGCAGAGGCAAGATGGTGAA+GGG - chr7_4:37273646-37273665 Msa1152080:intron 50.0%
TAAGCATCACCTCAGTCCGT+GGG - chr7_4:37273742-37273761 Msa1152080:intron 50.0%
! GGAGACTAAGGTGTCTAGAG+AGG + chr7_4:37273983-37274002 None:intergenic 50.0%
GGTAGGACATGTGAGTGGTG+TGG - chr7_4:37267152-37267171 Msa1152080:intron 55.0%
GAGTGGTGTGGTGCTTATGG+TGG - chr7_4:37267164-37267183 Msa1152080:CDS 55.0%
! AAACACAGTGGCTTGTGGGG+TGG + chr7_4:37267192-37267211 None:intergenic 55.0%
GGGAGCAAAGAAGAGCAGAG+TGG + chr7_4:37267330-37267349 None:intergenic 55.0%
AAGAGTTCCTGGATGGGGTG+GGG + chr7_4:37267350-37267369 None:intergenic 55.0%
GAAGAGTTCCTGGATGGGGT+GGG + chr7_4:37267351-37267370 None:intergenic 55.0%
TGAAGAGTTCCTGGATGGGG+TGG + chr7_4:37267352-37267371 None:intergenic 55.0%
!! GCCCATTATAAGGGTACCCG+TGG + chr7_4:37269110-37269129 None:intergenic 55.0%
TCATGGATGTCTAGGCTCGG+TGG - chr7_4:37269840-37269859 Msa1152080:intron 55.0%
! CATGGATGTCTAGGCTCGGT+GGG - chr7_4:37269841-37269860 Msa1152080:intron 55.0%
!! ATGGATGTCTAGGCTCGGTG+GGG - chr7_4:37269842-37269861 Msa1152080:intron 55.0%
TTTGGTCGTTCCAACCTCCG+TGG + chr7_4:37270446-37270465 None:intergenic 55.0%
CGACCAAACCATGCCAAGCA+AGG - chr7_4:37270458-37270477 Msa1152080:intron 55.0%
ACGAGTGTGGTGGCTACAAG+GGG + chr7_4:37271306-37271325 None:intergenic 55.0%
GTAGCCACCACACTCGTTAG+GGG - chr7_4:37271309-37271328 Msa1152080:intron 55.0%
ATTAGGGCCCCTAACGAGTG+TGG + chr7_4:37271319-37271338 None:intergenic 55.0%
AAACTATCATCGGCCTCCCC+TGG + chr7_4:37272421-37272440 None:intergenic 55.0%
AGCTCCACACGGTACCACTT+TGG - chr7_4:37273177-37273196 Msa1152080:intron 55.0%
! GAGAAGCACAATGGGCCCAA+TGG - chr7_4:37273347-37273366 Msa1152080:intron 55.0%
GTGCAGAGGCAAGATGGTGA+AGG - chr7_4:37273645-37273664 Msa1152080:intron 55.0%
GTAAGCATCACCTCAGTCCG+TGG - chr7_4:37273741-37273760 Msa1152080:intron 55.0%
! CTCGGGGTGCCAACCTAGTT+GGG + chr7_4:37267828-37267847 None:intergenic 60.0%
! TCTCGGGGTGCCAACCTAGT+TGG + chr7_4:37267829-37267848 None:intergenic 60.0%
!! GCTTTGAGGCTTAGTGGGGG+AGG - chr7_4:37269014-37269033 Msa1152080:intron 60.0%
!! TGGATGTCTAGGCTCGGTGG+GGG - chr7_4:37269843-37269862 Msa1152080:intron 60.0%
!! TCTAGGCTCGGTGGGGGAAT+GGG - chr7_4:37269849-37269868 Msa1152080:intron 60.0%
! TGACCTGTGTCGATCCACGG+AGG - chr7_4:37270429-37270448 Msa1152080:intron 60.0%
CAACCTCCGTGGATCGACAC+AGG + chr7_4:37270435-37270454 None:intergenic 60.0%
! CTGTGTCGATCCACGGAGGT+TGG - chr7_4:37270433-37270452 Msa1152080:intron 60.0%
CGGCCTTGCTTGGCATGGTT+TGG + chr7_4:37270464-37270483 None:intergenic 60.0%
AGCGGGGGCAATCAACGCAA+CGG + chr7_4:37270564-37270583 None:intergenic 60.0%
! CGTTGATTGCCCCCGCTGTA+TGG - chr7_4:37270567-37270586 Msa1152080:intron 60.0%
CTTTGCTCCCCACCCCATCC+AGG - chr7_4:37267340-37267359 Msa1152080:intron 65.0%
!! GTCTAGGCTCGGTGGGGGAA+TGG - chr7_4:37269848-37269867 Msa1152080:intron 65.0%
TTGCGCGGCCTTGCTTGGCA+TGG + chr7_4:37270469-37270488 None:intergenic 65.0%
ATGCCAAGCAAGGCCGCGCA+AGG - chr7_4:37270468-37270487 Msa1152080:intron 65.0%
AGTCCTTGCGCGGCCTTGCT+TGG + chr7_4:37270474-37270493 None:intergenic 65.0%
AGGGCCCCTAACGAGTGTGG+TGG + chr7_4:37271316-37271335 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 37266532 37274117 37266532 ID=Msa1152080;Name=Msa1152080
chr7_4 mRNA 37266532 37274117 37266532 ID=Msa1152080-mRNA-1;Parent=Msa1152080;Name=Msa1152080-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.63|0.5|0.75|0.63|0.58|12|0|291
chr7_4 exon 37274111 37274117 37274111 ID=Msa1152080-mRNA-1:exon:8806;Parent=Msa1152080-mRNA-1
chr7_4 exon 37271309 37271317 37271309 ID=Msa1152080-mRNA-1:exon:8805;Parent=Msa1152080-mRNA-1
chr7_4 exon 37268511 37268554 37268511 ID=Msa1152080-mRNA-1:exon:8804;Parent=Msa1152080-mRNA-1
chr7_4 exon 37268342 37268430 37268342 ID=Msa1152080-mRNA-1:exon:8803;Parent=Msa1152080-mRNA-1
chr7_4 exon 37268196 37268250 37268196 ID=Msa1152080-mRNA-1:exon:8802;Parent=Msa1152080-mRNA-1
chr7_4 exon 37267889 37267941 37267889 ID=Msa1152080-mRNA-1:exon:8801;Parent=Msa1152080-mRNA-1
chr7_4 exon 37267738 37267788 37267738 ID=Msa1152080-mRNA-1:exon:8800;Parent=Msa1152080-mRNA-1
chr7_4 exon 37267616 37267664 37267616 ID=Msa1152080-mRNA-1:exon:8799;Parent=Msa1152080-mRNA-1
chr7_4 exon 37267430 37267498 37267430 ID=Msa1152080-mRNA-1:exon:8798;Parent=Msa1152080-mRNA-1
chr7_4 exon 37267153 37267346 37267153 ID=Msa1152080-mRNA-1:exon:8797;Parent=Msa1152080-mRNA-1
chr7_4 exon 37266861 37267107 37266861 ID=Msa1152080-mRNA-1:exon:8796;Parent=Msa1152080-mRNA-1
chr7_4 exon 37266532 37266537 37266532 ID=Msa1152080-mRNA-1:exon:8795;Parent=Msa1152080-mRNA-1
chr7_4 CDS 37274111 37274117 37274111 ID=Msa1152080-mRNA-1:cds;Parent=Msa1152080-mRNA-1
chr7_4 CDS 37271309 37271317 37271309 ID=Msa1152080-mRNA-1:cds;Parent=Msa1152080-mRNA-1
chr7_4 CDS 37268511 37268554 37268511 ID=Msa1152080-mRNA-1:cds;Parent=Msa1152080-mRNA-1
chr7_4 CDS 37268342 37268430 37268342 ID=Msa1152080-mRNA-1:cds;Parent=Msa1152080-mRNA-1
chr7_4 CDS 37268196 37268250 37268196 ID=Msa1152080-mRNA-1:cds;Parent=Msa1152080-mRNA-1
chr7_4 CDS 37267889 37267941 37267889 ID=Msa1152080-mRNA-1:cds;Parent=Msa1152080-mRNA-1
chr7_4 CDS 37267738 37267788 37267738 ID=Msa1152080-mRNA-1:cds;Parent=Msa1152080-mRNA-1
chr7_4 CDS 37267616 37267664 37267616 ID=Msa1152080-mRNA-1:cds;Parent=Msa1152080-mRNA-1
chr7_4 CDS 37267430 37267498 37267430 ID=Msa1152080-mRNA-1:cds;Parent=Msa1152080-mRNA-1
chr7_4 CDS 37267153 37267346 37267153 ID=Msa1152080-mRNA-1:cds;Parent=Msa1152080-mRNA-1
chr7_4 CDS 37266861 37267107 37266861 ID=Msa1152080-mRNA-1:cds;Parent=Msa1152080-mRNA-1
chr7_4 CDS 37266532 37266537 37266532 ID=Msa1152080-mRNA-1:cds;Parent=Msa1152080-mRNA-1
Gene Sequence

>Msa1152080

ATGAAAGTTAAGACTAAGGATGGTATTCTTGATCTAAATAATGCTGCTGACACATTAGAGGTGCAAAAGAGGAGGATATATGATATTACTAATGTTCTTGAAGGGATTGGCCTTATAGAAAAAAAGTTCAAGAACAGAATTCAGTGGAAGGTGCTGGATGTTTCAAAACCAGGGGAGGCCGATGATAGTTTTGCTAGTTTACAGGCAGAAATTGAAAATTTAACAATTGAGGAACGCCGGTTGGATGAACAAATAAGGGAGATGCAAGAAAGACTACGGAATCTCAGTGAAGAAGAAAATAATGAGAAGTTTCTTTTTGTCACTGAGGAAGATATAAAGAACTTGCCCTGCTTCCAGAATGAAACCTTCATAGCAGCAATTAAAGCTCCACACGGTACCACTTTGGAAGTACCTGATCCTGATGAGGCTGTTGATTATCCCCAGAGAAGATACAGATACAGGATAGTCTTGAGAAGCACAATGGGCCCAATGGATGTTTACCTTGTTAGGTACCGTATGCTTTTTGGGTGTTTTGCTATCATTTGCTTCAAAGGTCGGTCATTTAGCTATTGCAATGGCATGCCATATGAAGCGATGATGCTTGAAGCTTGCAACATGATTCAATTTGAAGAGAAGTTTGAGGAACCCAAATTTCCACCCAGTCCAGAAGTTGACAAGGATCAATCAACTGTGGTCCCAAAAGATAAAGGGAAGGAAATAGAAGTGCAGAGGCAAGATGGTGAAGGGCCTAGTTCAGATCTTACCAACAATCACGACTTCGTGAGTGGGATCATGAAGATTGTTCCTTCAGATGTTGCTGTAAGCATCACCTCAGTCCGTGGGATATTTGTTTTGTATTTGCAACTTGAAAAG

Protein sequence

>Msa1152080

MKVKTKDGILDLNNAADTLEVQKRRIYDITNVLEGIGLIEKKFKNRIQWKVLDVSKPGEADDSFASLQAEIENLTIEERRLDEQIREMQERLRNLSEEENNEKFLFVTEEDIKNLPCFQNETFIAAIKAPHGTTLEVPDPDEAVDYPQRRYRYRIVLRSTMGPMDVYLVRYRMLFGCFAIICFKGRSFSYCNGMPYEAMMLEACNMIQFEEKFEEPKFPPSPEVDKDQSTVVPKDKGKEIEVQRQDGEGPSSDLTNNHDFVSGIMKIVPSDVAVSITSVRGIFVLYLQLEK