Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1153820 | KEH23269.1 | 96.386 | 249 | 9 | 0 | 78 | 326 | 39 | 287 | 7.09e-172 | 488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1153820 | sp|F4HNU8|OFP4_ARATH | 55.263 | 114 | 41 | 3 | 212 | 325 | 207 | 310 | 1.96e-31 | 123 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1153820 | A0A072U0G7 | 96.386 | 249 | 9 | 0 | 78 | 326 | 39 | 287 | 3.39e-172 | 488 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1153820 | TF | OFP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1153820 | MtrunA17_Chr7g0244571 | 96.386 | 249 | 9 | 0 | 78 | 326 | 101 | 349 | 9.71e-175 | 488 |
| Msa1153820 | MtrunA17_Chr4g0013081 | 52.030 | 271 | 71 | 11 | 87 | 324 | 136 | 380 | 1.57e-62 | 203 |
| Msa1153820 | MtrunA17_Chr5g0432531 | 47.368 | 209 | 93 | 6 | 115 | 323 | 60 | 251 | 7.21e-51 | 169 |
| Msa1153820 | MtrunA17_Chr2g0284471 | 60.606 | 66 | 26 | 0 | 258 | 323 | 247 | 312 | 1.20e-25 | 104 |
| Msa1153820 | MtrunA17_Chr8g0379681 | 57.576 | 66 | 28 | 0 | 258 | 323 | 258 | 323 | 4.64e-22 | 95.1 |
| Msa1153820 | MtrunA17_Chr8g0390531 | 53.226 | 62 | 29 | 0 | 258 | 319 | 258 | 319 | 5.14e-16 | 77.8 |
| Msa1153820 | MtrunA17_Chr1g0177881 | 44.928 | 69 | 38 | 0 | 251 | 319 | 95 | 163 | 2.30e-14 | 70.5 |
| Msa1153820 | MtrunA17_Chr4g0025901 | 45.070 | 71 | 39 | 0 | 249 | 319 | 90 | 160 | 1.43e-13 | 68.2 |
| Msa1153820 | MtrunA17_Chr4g0075391 | 47.619 | 63 | 33 | 0 | 260 | 322 | 83 | 145 | 2.78e-13 | 66.6 |
| Msa1153820 | MtrunA17_Chr3g0141471 | 42.500 | 80 | 46 | 0 | 240 | 319 | 180 | 259 | 1.29e-12 | 67.4 |
| Msa1153820 | MtrunA17_Chr7g0267111 | 44.068 | 59 | 33 | 0 | 261 | 319 | 113 | 171 | 5.40e-12 | 63.9 |
| Msa1153820 | MtrunA17_Chr5g0435131 | 35.955 | 89 | 49 | 1 | 237 | 317 | 62 | 150 | 7.22e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1153820 | AT1G06920.1 | 55.263 | 114 | 41 | 3 | 212 | 325 | 207 | 310 | 1.99e-32 | 123 |
| Msa1153820 | AT2G30400.1 | 52.336 | 107 | 43 | 2 | 218 | 323 | 218 | 317 | 3.37e-28 | 112 |
| Msa1153820 | AT5G01840.1 | 49.600 | 125 | 47 | 3 | 201 | 322 | 151 | 262 | 1.35e-25 | 103 |
| Msa1153820 | AT5G58360.1 | 60.811 | 74 | 29 | 0 | 250 | 323 | 216 | 289 | 1.70e-25 | 103 |
| Msa1153820 | AT4G18830.1 | 26.032 | 315 | 193 | 8 | 42 | 322 | 38 | 346 | 4.28e-16 | 78.6 |
| Msa1153820 | AT5G19650.1 | 50.000 | 66 | 33 | 0 | 257 | 322 | 153 | 218 | 2.80e-15 | 74.3 |
| Msa1153820 | AT3G52525.1 | 46.032 | 63 | 34 | 0 | 259 | 321 | 67 | 129 | 7.18e-13 | 65.9 |
| Msa1153820 | AT2G18500.1 | 41.791 | 67 | 39 | 0 | 256 | 322 | 224 | 290 | 9.47e-13 | 68.2 |
| Msa1153820 | AT2G36026.1 | 48.214 | 56 | 29 | 0 | 264 | 319 | 92 | 147 | 8.00e-12 | 63.5 |
| Msa1153820 | AT4G04025.1 | 47.458 | 59 | 31 | 0 | 260 | 318 | 115 | 173 | 4.23e-11 | 61.6 |
Find 39 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACGGTCTGTTCTGATTTC+TGG | 0.132362 | 7_4:+40869893 | None:intergenic |
| TCAAAGTGTTCAAGCAAATA+TGG | 0.233458 | 7_4:-40869283 | Msa1153820:CDS |
| AATGATGAACACAACGTTAA+AGG | 0.235673 | 7_4:-40869668 | Msa1153820:CDS |
| TTCTTCCTTTGTTGTGTTGT+TGG | 0.243928 | 7_4:+40870167 | None:intergenic |
| AGAATTGTTCTACTGATTAT+CGG | 0.312127 | 7_4:+40869250 | None:intergenic |
| CATTAGAACATCAAAGGATT+TGG | 0.325611 | 7_4:-40869363 | Msa1153820:CDS |
| TGTAGATTCTATTGCTTGTT+TGG | 0.346884 | 7_4:+40870045 | None:intergenic |
| TTTGTTGTGTTGTTGGTGTT+TGG | 0.367246 | 7_4:+40870174 | None:intergenic |
| ATGATGAACACAACGTTAAA+GGG | 0.389606 | 7_4:-40869667 | Msa1153820:CDS |
| TACGTCTTCCACCATCGTTT+CGG | 0.400519 | 7_4:-40869492 | Msa1153820:CDS |
| CCATCGTTTCGGCTGGCAAC+CGG | 0.420330 | 7_4:-40869481 | Msa1153820:CDS |
| ATCGATTATGATGTCGTTTG+TGG | 0.430255 | 7_4:+40869862 | None:intergenic |
| GTTCACCAGGTGTGAAACTT+AGG | 0.443025 | 7_4:-40869568 | Msa1153820:CDS |
| TCTGTTCTGATTTCTGGCTC+AGG | 0.447190 | 7_4:+40869899 | None:intergenic |
| TCTGGTTTGGTCACAATTGG+TGG | 0.452293 | 7_4:+40869758 | None:intergenic |
| TGGCAACCGGAGAAGTCTTT+CGG | 0.457447 | 7_4:-40869468 | Msa1153820:CDS |
| GGAGATGATGATGAAGTCTT+TGG | 0.474574 | 7_4:+40869965 | None:intergenic |
| CAGACATGATGCCTAATGCT+TGG | 0.484513 | 7_4:-40870232 | None:intergenic |
| CTGTTCTGATTTCTGGCTCA+GGG | 0.485970 | 7_4:+40869900 | None:intergenic |
| TCGATTATGATGTCGTTTGT+GGG | 0.504261 | 7_4:+40869863 | None:intergenic |
| AGATTCTCTGTTAGTTCACC+AGG | 0.512695 | 7_4:-40869581 | Msa1153820:CDS |
| ATTCACCAAGAATTTCAAAC+CGG | 0.519789 | 7_4:-40869541 | Msa1153820:CDS |
| TCTTCCACCATCGTTTCGGC+TGG | 0.529072 | 7_4:-40869488 | Msa1153820:CDS |
| CTATCAAGTGGAGAATCAAA+TGG | 0.529685 | 7_4:+40869944 | None:intergenic |
| ACTCATCTGAATTCAAAGAA+AGG | 0.530280 | 7_4:+40869321 | None:intergenic |
| CTAACAGAGAATCTTCTACT+TGG | 0.532521 | 7_4:+40869590 | None:intergenic |
| GAACAACATTAGAACATCAA+AGG | 0.551741 | 7_4:-40869369 | Msa1153820:CDS |
| GGAAAATTCAAACACATGGC+CGG | 0.552191 | 7_4:-40869520 | Msa1153820:CDS |
| AACTATCCGAAAGACTTCTC+CGG | 0.559644 | 7_4:+40869462 | None:intergenic |
| TTTCTTGGATTGCTTTGGTG+GGG | 0.559822 | 7_4:+40870095 | None:intergenic |
| AAACACCAACAACACAACAA+AGG | 0.563217 | 7_4:-40870172 | Msa1153820:CDS |
| GTTGCCAGCCGAAACGATGG+TGG | 0.586748 | 7_4:+40869484 | None:intergenic |
| CCGGTTGCCAGCCGAAACGA+TGG | 0.591822 | 7_4:+40869481 | None:intergenic |
| GATTCTCTAAAATCTCCTTG+TGG | 0.610956 | 7_4:+40869413 | None:intergenic |
| AACCGGAAAATTCAAACACA+TGG | 0.611341 | 7_4:-40869524 | Msa1153820:CDS |
| GATTCTGCAGAGCTATCAAG+TGG | 0.613063 | 7_4:+40869932 | None:intergenic |
| TTGATCCTAAGTTTCACACC+TGG | 0.631177 | 7_4:+40869563 | None:intergenic |
| AAGTCATCATTGAATCCACA+AGG | 0.674680 | 7_4:-40869428 | Msa1153820:CDS |
| CGTTTGTGGGAAGAAGAACA+CGG | 0.743153 | 7_4:+40869876 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAAGTAGTAAGATTTTCT+TGG | + | chr7_4:40869399-40869418 | None:intergenic | 25.0% |
| !!! | TGTTTTGATGATGATTTTCT+TGG | + | chr7_4:40869468-40869487 | None:intergenic | 25.0% |
| !! | TTTGATGAATTTTTGCTTCT+GGG | + | chr7_4:40869790-40869809 | None:intergenic | 25.0% |
| !! | ATTTGATGAATTTTTGCTTC+TGG | + | chr7_4:40869791-40869810 | None:intergenic | 25.0% |
| !! | ACTAAAAGTCAAGATTTTGA+AGG | - | chr7_4:40869834-40869853 | Msa1153820:CDS | 25.0% |
| !! | GTAAAGTAGTAAGATTTTCT+TGG | + | chr7_4:40869399-40869418 | None:intergenic | 25.0% |
| !!! | TGTTTTGATGATGATTTTCT+TGG | + | chr7_4:40869468-40869487 | None:intergenic | 25.0% |
| !! | TTTGATGAATTTTTGCTTCT+GGG | + | chr7_4:40869790-40869809 | None:intergenic | 25.0% |
| !! | ATTTGATGAATTTTTGCTTC+TGG | + | chr7_4:40869791-40869810 | None:intergenic | 25.0% |
| !! | ACTAAAAGTCAAGATTTTGA+AGG | - | chr7_4:40869834-40869853 | Msa1153820:CDS | 25.0% |
| ! | TTTTACAAGCTTAGAGACAT+GGG | - | chr7_4:40869267-40869286 | Msa1153820:CDS | 30.0% |
| !!! | CTTTGTTTTTGATGTGTTTG+AGG | + | chr7_4:40869358-40869377 | None:intergenic | 30.0% |
| ! | AAGATTTTCTTGGATTGCTT+TGG | + | chr7_4:40869389-40869408 | None:intergenic | 30.0% |
| TGTAGATTCTATTGCTTGTT+TGG | + | chr7_4:40869434-40869453 | None:intergenic | 30.0% | |
| !!! | TTTGATGATGATTTTCTTGG+TGG | + | chr7_4:40869465-40869484 | None:intergenic | 30.0% |
| ! | AACAAGTAGTTGAACTTTTC+TGG | + | chr7_4:40869739-40869758 | None:intergenic | 30.0% |
| AATGATGAACACAACGTTAA+AGG | - | chr7_4:40869808-40869827 | Msa1153820:CDS | 30.0% | |
| ATGATGAACACAACGTTAAA+GGG | - | chr7_4:40869809-40869828 | Msa1153820:CDS | 30.0% | |
| ATTCACCAAGAATTTCAAAC+CGG | - | chr7_4:40869935-40869954 | Msa1153820:CDS | 30.0% | |
| !! | ATTTTCCGGTTTGAAATTCT+TGG | + | chr7_4:40869943-40869962 | None:intergenic | 30.0% |
| !! | AGGAGATTTTAGAGAATCAA+TGG | - | chr7_4:40870068-40870087 | Msa1153820:CDS | 30.0% |
| !! | AGATTTTAGAGAATCAATGG+TGG | - | chr7_4:40870071-40870090 | Msa1153820:CDS | 30.0% |
| GAACAACATTAGAACATCAA+AGG | - | chr7_4:40870107-40870126 | Msa1153820:CDS | 30.0% | |
| CATTAGAACATCAAAGGATT+TGG | - | chr7_4:40870113-40870132 | Msa1153820:CDS | 30.0% | |
| ACTCATCTGAATTCAAAGAA+AGG | + | chr7_4:40870158-40870177 | None:intergenic | 30.0% | |
| ! | TCAAAGTGTTCAAGCAAATA+TGG | - | chr7_4:40870193-40870212 | Msa1153820:CDS | 30.0% |
| ! | TTTTACAAGCTTAGAGACAT+GGG | - | chr7_4:40869267-40869286 | Msa1153820:CDS | 30.0% |
| !!! | CTTTGTTTTTGATGTGTTTG+AGG | + | chr7_4:40869358-40869377 | None:intergenic | 30.0% |
| ! | AAGATTTTCTTGGATTGCTT+TGG | + | chr7_4:40869389-40869408 | None:intergenic | 30.0% |
| TGTAGATTCTATTGCTTGTT+TGG | + | chr7_4:40869434-40869453 | None:intergenic | 30.0% | |
| !!! | TTTGATGATGATTTTCTTGG+TGG | + | chr7_4:40869465-40869484 | None:intergenic | 30.0% |
| ! | AACAAGTAGTTGAACTTTTC+TGG | + | chr7_4:40869739-40869758 | None:intergenic | 30.0% |
| AATGATGAACACAACGTTAA+AGG | - | chr7_4:40869808-40869827 | Msa1153820:CDS | 30.0% | |
| ATGATGAACACAACGTTAAA+GGG | - | chr7_4:40869809-40869828 | Msa1153820:CDS | 30.0% | |
| ATTCACCAAGAATTTCAAAC+CGG | - | chr7_4:40869935-40869954 | Msa1153820:CDS | 30.0% | |
| !! | ATTTTCCGGTTTGAAATTCT+TGG | + | chr7_4:40869943-40869962 | None:intergenic | 30.0% |
| !! | AGGAGATTTTAGAGAATCAA+TGG | - | chr7_4:40870068-40870087 | Msa1153820:CDS | 30.0% |
| !! | AGATTTTAGAGAATCAATGG+TGG | - | chr7_4:40870071-40870090 | Msa1153820:CDS | 30.0% |
| GAACAACATTAGAACATCAA+AGG | - | chr7_4:40870107-40870126 | Msa1153820:CDS | 30.0% | |
| CATTAGAACATCAAAGGATT+TGG | - | chr7_4:40870113-40870132 | Msa1153820:CDS | 30.0% | |
| ACTCATCTGAATTCAAAGAA+AGG | + | chr7_4:40870158-40870177 | None:intergenic | 30.0% | |
| ! | TCAAAGTGTTCAAGCAAATA+TGG | - | chr7_4:40870193-40870212 | Msa1153820:CDS | 30.0% |
| ! | GTTTTACAAGCTTAGAGACA+TGG | - | chr7_4:40869266-40869285 | Msa1153820:CDS | 35.0% |
| ! | TTTGTTGTGTTGTTGGTGTT+TGG | + | chr7_4:40869305-40869324 | None:intergenic | 35.0% |
| AAACACCAACAACACAACAA+AGG | - | chr7_4:40869304-40869323 | Msa1153820:CDS | 35.0% | |
| ! | TTCTTCCTTTGTTGTGTTGT+TGG | + | chr7_4:40869312-40869331 | None:intergenic | 35.0% |
| ! | TTTTCTTGGATTGCTTTGGT+GGG | + | chr7_4:40869385-40869404 | None:intergenic | 35.0% |
| ! | ATTTTCTTGGATTGCTTTGG+TGG | + | chr7_4:40869386-40869405 | None:intergenic | 35.0% |
| !!! | GTCTTTGGTGTTCTTCTTTT+TGG | + | chr7_4:40869499-40869518 | None:intergenic | 35.0% |
| CTATCAAGTGGAGAATCAAA+TGG | + | chr7_4:40869535-40869554 | None:intergenic | 35.0% | |
| ! | TCGATTATGATGTCGTTTGT+GGG | + | chr7_4:40869616-40869635 | None:intergenic | 35.0% |
| ! | ATCGATTATGATGTCGTTTG+TGG | + | chr7_4:40869617-40869636 | None:intergenic | 35.0% |
| !!! | TTTTCTGGTTTGGTCACAAT+TGG | + | chr7_4:40869724-40869743 | None:intergenic | 35.0% |
| !!! | GTAGTTGAACTTTTCTGGTT+TGG | + | chr7_4:40869734-40869753 | None:intergenic | 35.0% |
| !! | AGATTTTGAAGGAAGAACAG+AGG | - | chr7_4:40869845-40869864 | Msa1153820:CDS | 35.0% |
| CTAACAGAGAATCTTCTACT+TGG | + | chr7_4:40869889-40869908 | None:intergenic | 35.0% | |
| AACCGGAAAATTCAAACACA+TGG | - | chr7_4:40869952-40869971 | Msa1153820:CDS | 35.0% | |
| AAGTCATCATTGAATCCACA+AGG | - | chr7_4:40870048-40870067 | Msa1153820:CDS | 35.0% | |
| !! | GATTCTCTAAAATCTCCTTG+TGG | + | chr7_4:40870066-40870085 | None:intergenic | 35.0% |
| ! | GTTTTACAAGCTTAGAGACA+TGG | - | chr7_4:40869266-40869285 | Msa1153820:CDS | 35.0% |
| ! | TTTGTTGTGTTGTTGGTGTT+TGG | + | chr7_4:40869305-40869324 | None:intergenic | 35.0% |
| AAACACCAACAACACAACAA+AGG | - | chr7_4:40869304-40869323 | Msa1153820:CDS | 35.0% | |
| ! | TTCTTCCTTTGTTGTGTTGT+TGG | + | chr7_4:40869312-40869331 | None:intergenic | 35.0% |
| ! | TTTTCTTGGATTGCTTTGGT+GGG | + | chr7_4:40869385-40869404 | None:intergenic | 35.0% |
| ! | ATTTTCTTGGATTGCTTTGG+TGG | + | chr7_4:40869386-40869405 | None:intergenic | 35.0% |
| !!! | GTCTTTGGTGTTCTTCTTTT+TGG | + | chr7_4:40869499-40869518 | None:intergenic | 35.0% |
| CTATCAAGTGGAGAATCAAA+TGG | + | chr7_4:40869535-40869554 | None:intergenic | 35.0% | |
| ! | TCGATTATGATGTCGTTTGT+GGG | + | chr7_4:40869616-40869635 | None:intergenic | 35.0% |
| ! | ATCGATTATGATGTCGTTTG+TGG | + | chr7_4:40869617-40869636 | None:intergenic | 35.0% |
| !!! | TTTTCTGGTTTGGTCACAAT+TGG | + | chr7_4:40869724-40869743 | None:intergenic | 35.0% |
| !!! | GTAGTTGAACTTTTCTGGTT+TGG | + | chr7_4:40869734-40869753 | None:intergenic | 35.0% |
| !! | AGATTTTGAAGGAAGAACAG+AGG | - | chr7_4:40869845-40869864 | Msa1153820:CDS | 35.0% |
| CTAACAGAGAATCTTCTACT+TGG | + | chr7_4:40869889-40869908 | None:intergenic | 35.0% | |
| AACCGGAAAATTCAAACACA+TGG | - | chr7_4:40869952-40869971 | Msa1153820:CDS | 35.0% | |
| AAGTCATCATTGAATCCACA+AGG | - | chr7_4:40870048-40870067 | Msa1153820:CDS | 35.0% | |
| !! | GATTCTCTAAAATCTCCTTG+TGG | + | chr7_4:40870066-40870085 | None:intergenic | 35.0% |
| TTTCTTGGATTGCTTTGGTG+GGG | + | chr7_4:40869384-40869403 | None:intergenic | 40.0% | |
| ! | GGAGATGATGATGAAGTCTT+TGG | + | chr7_4:40869514-40869533 | None:intergenic | 40.0% |
| AGATTCTCTGTTAGTTCACC+AGG | - | chr7_4:40869895-40869914 | Msa1153820:CDS | 40.0% | |
| TTGATCCTAAGTTTCACACC+TGG | + | chr7_4:40869916-40869935 | None:intergenic | 40.0% | |
| ! | GGCCATGTGTTTGAATTTTC+CGG | + | chr7_4:40869957-40869976 | None:intergenic | 40.0% |
| GGAAAATTCAAACACATGGC+CGG | - | chr7_4:40869956-40869975 | Msa1153820:CDS | 40.0% | |
| AACTATCCGAAAGACTTCTC+CGG | + | chr7_4:40870017-40870036 | None:intergenic | 40.0% | |
| TTTCTTGGATTGCTTTGGTG+GGG | + | chr7_4:40869384-40869403 | None:intergenic | 40.0% | |
| ! | GGAGATGATGATGAAGTCTT+TGG | + | chr7_4:40869514-40869533 | None:intergenic | 40.0% |
| AGATTCTCTGTTAGTTCACC+AGG | - | chr7_4:40869895-40869914 | Msa1153820:CDS | 40.0% | |
| TTGATCCTAAGTTTCACACC+TGG | + | chr7_4:40869916-40869935 | None:intergenic | 40.0% | |
| ! | GGCCATGTGTTTGAATTTTC+CGG | + | chr7_4:40869957-40869976 | None:intergenic | 40.0% |
| GGAAAATTCAAACACATGGC+CGG | - | chr7_4:40869956-40869975 | Msa1153820:CDS | 40.0% | |
| AACTATCCGAAAGACTTCTC+CGG | + | chr7_4:40870017-40870036 | None:intergenic | 40.0% | |
| GATTCTGCAGAGCTATCAAG+TGG | + | chr7_4:40869547-40869566 | None:intergenic | 45.0% | |
| !! | CTGTTCTGATTTCTGGCTCA+GGG | + | chr7_4:40869579-40869598 | None:intergenic | 45.0% |
| !! | TCTGTTCTGATTTCTGGCTC+AGG | + | chr7_4:40869580-40869599 | None:intergenic | 45.0% |
| ACACGGTCTGTTCTGATTTC+TGG | + | chr7_4:40869586-40869605 | None:intergenic | 45.0% | |
| CGTTTGTGGGAAGAAGAACA+CGG | + | chr7_4:40869603-40869622 | None:intergenic | 45.0% | |
| !! | TCTGGTTTGGTCACAATTGG+TGG | + | chr7_4:40869721-40869740 | None:intergenic | 45.0% |
| GTTCACCAGGTGTGAAACTT+AGG | - | chr7_4:40869908-40869927 | Msa1153820:CDS | 45.0% | |
| ! | TGGTGGAAGACGTACTTTTC+CGG | + | chr7_4:40869978-40869997 | None:intergenic | 45.0% |
| TACGTCTTCCACCATCGTTT+CGG | - | chr7_4:40869984-40870003 | Msa1153820:CDS | 45.0% | |
| GATTCTGCAGAGCTATCAAG+TGG | + | chr7_4:40869547-40869566 | None:intergenic | 45.0% | |
| !! | CTGTTCTGATTTCTGGCTCA+GGG | + | chr7_4:40869579-40869598 | None:intergenic | 45.0% |
| !! | TCTGTTCTGATTTCTGGCTC+AGG | + | chr7_4:40869580-40869599 | None:intergenic | 45.0% |
| ACACGGTCTGTTCTGATTTC+TGG | + | chr7_4:40869586-40869605 | None:intergenic | 45.0% | |
| CGTTTGTGGGAAGAAGAACA+CGG | + | chr7_4:40869603-40869622 | None:intergenic | 45.0% | |
| !! | TCTGGTTTGGTCACAATTGG+TGG | + | chr7_4:40869721-40869740 | None:intergenic | 45.0% |
| GTTCACCAGGTGTGAAACTT+AGG | - | chr7_4:40869908-40869927 | Msa1153820:CDS | 45.0% | |
| ! | TGGTGGAAGACGTACTTTTC+CGG | + | chr7_4:40869978-40869997 | None:intergenic | 45.0% |
| TACGTCTTCCACCATCGTTT+CGG | - | chr7_4:40869984-40870003 | Msa1153820:CDS | 45.0% | |
| TGGCAACCGGAGAAGTCTTT+CGG | - | chr7_4:40870008-40870027 | Msa1153820:CDS | 50.0% | |
| TGGCAACCGGAGAAGTCTTT+CGG | - | chr7_4:40870008-40870027 | Msa1153820:CDS | 50.0% | |
| TCTTCCACCATCGTTTCGGC+TGG | - | chr7_4:40869988-40870007 | Msa1153820:CDS | 55.0% | |
| TCTTCCACCATCGTTTCGGC+TGG | - | chr7_4:40869988-40870007 | Msa1153820:CDS | 55.0% | |
| GTTGCCAGCCGAAACGATGG+TGG | + | chr7_4:40869995-40870014 | None:intergenic | 60.0% | |
| CCATCGTTTCGGCTGGCAAC+CGG | - | chr7_4:40869995-40870014 | Msa1153820:CDS | 60.0% | |
| GTTGCCAGCCGAAACGATGG+TGG | + | chr7_4:40869995-40870014 | None:intergenic | 60.0% | |
| CCATCGTTTCGGCTGGCAAC+CGG | - | chr7_4:40869995-40870014 | Msa1153820:CDS | 60.0% | |
| CCGGTTGCCAGCCGAAACGA+TGG | + | chr7_4:40869998-40870017 | None:intergenic | 65.0% | |
| CCGGTTGCCAGCCGAAACGA+TGG | + | chr7_4:40869998-40870017 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 40869259 | 40870239 | 40869259 | ID=Msa1153820;Name=Msa1153820 |
| chr7_4 | mRNA | 40869259 | 40870239 | 40869259 | ID=Msa1153820-mRNA-1;Parent=Msa1153820;Name=Msa1153820-mRNA-1;_AED=0.02;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|326 |
| chr7_4 | exon | 40869259 | 40870239 | 40869259 | ID=Msa1153820-mRNA-1:exon:9905;Parent=Msa1153820-mRNA-1 |
| chr7_4 | CDS | 40869259 | 40870239 | 40869259 | ID=Msa1153820-mRNA-1:cds;Parent=Msa1153820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
