AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1155300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1155300 MtrunA17_Chr7g0249311 75.480 469 57 6 98 515 1 462 0.0 692
Msa1155300 MtrunA17_Chr7g0249311 48.276 87 44 1 240 325 391 477 4.62e-15 78.2
Msa1155300 MtrunA17_Chr7g0249301 83.056 360 23 3 180 507 1 354 0.0 600
Msa1155300 MtrunA17_Chr7g0249301 47.126 87 32 2 239 311 290 376 3.06e-14 74.3
Msa1155300 MtrunA17_Chr3g0079691 41.489 564 256 18 1 516 29 566 1.26e-113 352
Msa1155300 MtrunA17_Chr3g0079691 46.078 102 43 5 240 338 494 586 3.75e-15 78.6
Msa1155300 MtrunA17_Chr5g0445311 39.530 468 210 9 58 511 22 430 2.12e-91 289
Msa1155300 MtrunA17_Chr5g0445311 51.429 70 33 1 445 514 200 268 2.61e-13 72.4
Msa1155300 MtrunA17_Chr3g0101131 40.333 481 216 13 60 511 43 481 1.20e-90 289
Msa1155300 MtrunA17_Chr7g0218081 37.581 463 202 12 65 516 95 481 9.80e-82 263
Msa1155300 MtrunA17_Chr5g0432161 36.961 441 223 9 80 507 85 483 7.31e-73 242
Msa1155300 MtrunA17_Chr5g0432161 60.000 70 23 3 240 306 420 487 1.04e-15 80.1
Msa1155300 MtrunA17_Chr5g0418191 46.454 282 112 6 238 517 148 392 2.04e-70 231
Msa1155300 MtrunA17_Chr7g0243891 46.296 270 99 5 238 507 213 436 2.94e-68 229
Msa1155300 MtrunA17_Chr7g0243891 50.000 74 34 2 445 516 216 288 4.04e-14 74.7
Msa1155300 MtrunA17_Chr7g0263531 43.643 291 131 4 224 513 171 429 1.19e-67 224
Msa1155300 MtrunA17_Chr7g0263531 50.704 71 34 1 446 516 190 259 5.07e-14 74.3
Msa1155300 MtrunA17_Chr3g0106491 46.992 266 104 6 242 507 199 427 9.59e-67 224
Msa1155300 MtrunA17_Chr3g0106491 50.617 81 33 3 436 510 185 264 2.64e-15 78.6
Msa1155300 MtrunA17_Chr3g0106491 55.072 69 26 3 240 306 364 429 5.68e-13 71.2
Msa1155300 MtrunA17_Chr4g0074001 31.202 391 211 10 139 507 67 421 7.34e-50 179
Msa1155300 MtrunA17_Chr4g0074001 46.341 82 42 2 225 304 342 423 5.46e-14 74.3
Msa1155300 MtrunA17_Chr5g0447701 38.519 270 122 6 238 507 89 314 8.19e-49 173
Msa1155300 MtrunA17_Chr5g0447701 40.404 99 57 2 203 299 213 311 7.10e-14 73.6
Msa1155300 MtrunA17_Chr4g0004911 32.414 435 197 12 83 507 51 398 5.91e-45 165
Msa1155300 MtrunA17_Chr4g0042831 40.678 236 112 6 307 517 118 350 2.83e-42 155
Msa1155300 MtrunA17_Chr4g0042831 65.079 63 21 1 242 303 146 208 3.50e-21 95.5
Msa1155300 MtrunA17_Chr4g0042831 41.525 118 55 3 240 356 277 381 6.60e-16 79.7
Msa1155300 MtrunA17_Chr7g0249321 80.000 75 15 0 24 98 21 95 4.69e-35 127
Msa1155300 MtrunA17_Chr1g0188941 61.250 80 31 0 426 505 32 111 4.60e-29 110
Msa1155300 MtrunA17_Chr1g0188941 50.000 62 30 1 239 299 49 110 2.64e-13 66.6
Msa1155300 MtrunA17_Chr8g0335811 62.338 77 29 0 425 501 134 210 1.64e-28 113
Msa1155300 MtrunA17_Chr8g0335811 56.667 60 25 1 239 297 152 211 5.23e-15 74.3
Msa1155300 MtrunA17_Chr4g0051881 55.422 83 37 0 431 513 164 246 1.12e-25 107
Msa1155300 MtrunA17_Chr4g0051881 56.923 65 27 1 240 303 177 241 1.49e-16 80.9
Msa1155300 MtrunA17_Chr2g0294231 57.317 82 35 0 429 510 187 268 2.28e-25 107
Msa1155300 MtrunA17_Chr2g0294231 55.385 65 28 1 240 303 202 266 3.54e-16 80.5
Msa1155300 MtrunA17_Chr5g0443131 57.500 80 34 0 431 510 143 222 2.47e-25 106
Msa1155300 MtrunA17_Chr5g0443131 56.923 65 27 1 240 303 156 220 4.40e-16 79.3
Msa1155300 MtrunA17_Chr3g0129361 58.108 74 31 0 428 501 127 200 3.58e-25 103
Msa1155300 MtrunA17_Chr3g0129361 53.333 60 27 1 239 297 142 201 1.30e-14 73.2
Msa1155300 MtrunA17_Chr6g0485431 44.915 118 63 2 395 510 103 220 6.05e-25 106
Msa1155300 MtrunA17_Chr6g0485431 44.776 67 35 2 240 304 153 219 3.10e-12 68.2
Msa1155300 MtrunA17_Chr1g0150801 58.571 70 29 0 432 501 89 158 9.16e-25 100
Msa1155300 MtrunA17_Chr1g0150801 43.038 79 38 2 225 296 80 158 1.57e-11 62.8
Msa1155300 MtrunA17_Chr7g0270191 57.895 76 32 0 429 504 129 204 1.40e-24 103
Msa1155300 MtrunA17_Chr7g0270191 48.148 81 41 1 240 319 144 224 3.21e-16 79.3
Msa1155300 MtrunA17_Chr8g0383251 53.425 73 34 0 432 504 95 167 2.69e-24 100
Msa1155300 MtrunA17_Chr8g0383251 46.250 80 41 2 225 302 91 170 3.30e-12 65.5
Msa1155300 MtrunA17_Chr5g0418781 56.579 76 33 0 426 501 105 180 5.75e-24 101
Msa1155300 MtrunA17_Chr5g0418781 53.623 69 31 1 240 307 123 191 7.74e-16 77.8
Msa1155300 MtrunA17_Chr1g0194481 52.381 84 40 0 429 512 142 225 7.31e-24 102
Msa1155300 MtrunA17_Chr1g0194481 55.385 65 28 1 240 303 157 221 4.62e-17 82.4
Msa1155300 MtrunA17_Chr3g0129321 53.947 76 35 0 430 505 103 178 1.07e-23 99.0
Msa1155300 MtrunA17_Chr3g0129321 50.000 66 32 1 238 302 115 180 2.15e-13 69.3
Msa1155300 MtrunA17_Chr8g0383351 57.333 75 31 1 428 501 142 216 1.15e-23 99.8
Msa1155300 MtrunA17_Chr8g0383351 53.333 60 27 1 239 297 158 217 6.07e-15 74.3
Msa1155300 MtrunA17_Chr7g0270831 43.590 117 57 4 402 516 180 289 1.56e-23 103
Msa1155300 MtrunA17_Chr7g0270831 47.692 65 32 2 237 299 212 276 2.49e-12 68.9
Msa1155300 MtrunA17_Chr7g0224801 55.405 74 33 0 436 509 84 157 3.51e-23 96.3
Msa1155300 MtrunA17_Chr7g0224801 45.312 64 34 1 240 302 92 155 6.60e-13 67.0
Msa1155300 MtrunA17_Chr4g0068541 55.844 77 34 0 429 505 192 268 6.21e-23 101
Msa1155300 MtrunA17_Chr4g0068541 50.725 69 33 1 240 307 207 275 4.02e-15 77.4
Msa1155300 MtrunA17_Chr2g0288871 35.714 168 76 5 342 504 225 365 1.19e-22 101
Msa1155300 MtrunA17_Chr2g0288871 47.692 65 32 2 237 299 301 365 3.88e-12 68.6
Msa1155300 MtrunA17_Chr8g0386241 52.564 78 37 0 426 503 84 161 1.71e-22 94.7
Msa1155300 MtrunA17_Chr8g0386241 37.500 96 43 2 224 302 70 165 4.06e-13 67.8
Msa1155300 MtrunA17_Chr1g0189391 57.746 71 29 1 432 501 84 154 2.24e-22 98.2
Msa1155300 MtrunA17_Chr1g0189391 40.964 83 40 3 217 297 80 155 4.02e-11 64.3
Msa1155300 MtrunA17_Chr4g0075201 41.071 112 48 2 396 506 235 329 6.50e-22 99.0
Msa1155300 MtrunA17_Chr2g0322391 51.250 80 38 1 428 506 332 411 1.45e-21 98.2
Msa1155300 MtrunA17_Chr3g0099641 50.000 78 38 1 428 504 234 311 2.10e-21 97.1
Msa1155300 MtrunA17_Chr3g0099641 44.928 69 36 2 237 303 247 315 1.16e-12 70.1
Msa1155300 MtrunA17_Chr4g0051181 50.633 79 38 1 429 506 227 305 2.13e-21 97.1
Msa1155300 MtrunA17_Chr4g0051181 49.206 63 30 2 239 299 241 303 4.69e-11 65.1
Msa1155300 MtrunA17_Chr4g0025061 46.154 91 48 1 427 516 342 432 2.61e-21 97.4
Msa1155300 MtrunA17_Chr4g0060271 50.649 77 37 1 429 504 239 315 2.94e-21 97.4
Msa1155300 MtrunA17_Chr4g0060271 49.206 63 30 2 239 299 253 315 1.07e-11 67.4
Msa1155300 MtrunA17_Chr7g0248721 46.602 103 54 1 399 501 95 196 3.13e-21 92.4
Msa1155300 MtrunA17_Chr7g0248721 56.897 58 23 2 240 296 140 196 6.52e-13 68.2
Msa1155300 MtrunA17_Chr4g0053281 47.778 90 43 2 422 510 246 332 1.60e-20 92.8
Msa1155300 MtrunA17_Chr4g0053281 51.724 58 26 2 242 297 267 324 3.96e-12 67.8
Msa1155300 MtrunA17_Chr1g0147881 47.191 89 43 2 425 512 245 330 1.72e-20 92.8
Msa1155300 MtrunA17_Chr1g0147881 54.386 57 24 2 242 296 263 319 2.75e-12 68.2
Msa1155300 MtrunA17_Chr7g0216891 38.843 121 56 3 396 501 159 276 2.26e-20 94.7
Msa1155300 MtrunA17_Chr2g0302391 48.148 81 41 1 427 506 193 273 5.46e-20 92.4
Msa1155300 MtrunA17_Chr2g0302391 43.939 66 35 2 240 303 210 275 1.89e-11 66.2
Msa1155300 MtrunA17_Chr5g0432071 60.317 63 25 0 242 304 105 167 1.28e-19 87.4
Msa1155300 MtrunA17_Chr5g0432071 48.571 70 35 1 445 514 104 172 3.76e-14 71.6
Msa1155300 MtrunA17_Chr5g0401821 50.000 86 42 1 426 510 180 265 2.76e-19 87.8
Msa1155300 MtrunA17_Chr5g0401821 53.448 58 25 2 242 297 200 257 4.61e-12 66.6
Msa1155300 MtrunA17_Chr5g0447711 45.882 85 46 0 431 515 216 300 3.05e-19 88.6
Msa1155300 MtrunA17_Chr5g0447711 48.387 62 32 0 241 302 83 144 1.30e-13 71.6
Msa1155300 MtrunA17_Chr4g0025051 46.512 86 45 1 432 516 322 407 3.73e-19 90.9
Msa1155300 MtrunA17_Chr2g0333851 44.681 94 50 2 413 505 138 230 6.15e-18 84.7
Msa1155300 MtrunA17_Chr2g0333851 46.774 62 31 2 240 299 168 229 3.26e-11 64.7
Msa1155300 MtrunA17_Chr3g0136961 48.684 76 36 2 429 501 120 195 8.97e-18 84.0
Msa1155300 MtrunA17_Chr3g0136961 48.333 60 29 2 240 297 137 196 1.16e-11 65.9
Msa1155300 MtrunA17_Chr4g0071521 42.727 110 51 3 393 501 204 302 9.39e-18 84.3
Msa1155300 MtrunA17_Chr4g0071521 37.778 90 46 3 219 298 215 304 2.96e-12 67.8
Msa1155300 MtrunA17_Chr1g0184691 50.000 82 36 3 425 504 276 354 1.35e-17 84.3
Msa1155300 MtrunA17_Chr1g0184691 54.237 59 25 2 242 298 294 352 6.51e-12 67.0
Msa1155300 MtrunA17_Chr7g0238921 57.895 57 24 0 445 501 124 180 6.44e-17 81.6
Msa1155300 MtrunA17_Chr7g0238921 53.571 56 25 1 242 296 125 180 4.63e-11 64.3
Msa1155300 MtrunA17_Chr1g0150281 44.048 84 41 3 424 501 114 197 1.84e-16 80.1
Msa1155300 MtrunA17_Chr8g0387501 48.000 75 38 1 444 517 128 202 5.92e-16 78.2
Msa1155300 MtrunA17_Chr8g0387501 48.649 74 34 3 239 310 127 198 2.88e-15 76.3
Msa1155300 MtrunA17_Chr2g0284321 46.237 93 42 4 242 327 36 127 7.45e-16 76.6
Msa1155300 MtrunA17_Chr2g0284321 50.000 74 31 2 446 513 36 109 4.90e-15 74.3
Msa1155300 MtrunA17_Chr4g0001361 45.000 80 35 2 443 513 160 239 8.32e-16 78.6
Msa1155300 MtrunA17_Chr4g0001361 40.000 90 42 3 240 317 161 250 4.31e-12 67.4
Msa1155300 MtrunA17_Chr1g0150271 46.032 63 33 1 443 504 99 161 9.30e-16 77.4
Msa1155300 MtrunA17_Chr1g0150271 42.029 69 38 2 240 306 100 168 5.32e-11 63.2
Msa1155300 MtrunA17_Chr4g0024391 40.698 86 50 1 432 516 216 301 1.12e-15 79.7
Msa1155300 MtrunA17_Chr2g0293481 41.000 100 52 2 410 508 238 331 2.36e-15 78.6
Msa1155300 MtrunA17_Chr2g0293481 47.500 80 38 3 232 307 258 337 2.78e-13 72.0
Msa1155300 MtrunA17_Chr1g0202461 46.591 88 42 4 225 307 244 331 3.10e-15 77.4
Msa1155300 MtrunA17_Chr1g0202461 40.000 95 52 3 419 509 233 326 3.65e-15 77.4
Msa1155300 MtrunA17_Chr8g0348311 43.478 92 47 3 425 514 137 225 3.58e-15 77.0
Msa1155300 MtrunA17_Chr8g0348311 39.604 101 47 4 220 306 124 224 8.40e-13 69.7
Msa1155300 MtrunA17_Chr7g0270051 50.000 62 30 1 446 506 54 115 5.15e-15 75.1
Msa1155300 MtrunA17_Chr7g0270051 50.000 60 28 2 242 299 54 113 1.93e-12 67.8
Msa1155300 MtrunA17_Chr8g0379461 44.928 69 37 1 446 513 77 145 5.19e-15 74.7
Msa1155300 MtrunA17_Chr8g0379461 54.839 62 26 2 242 301 77 138 5.22e-14 72.0
Msa1155300 MtrunA17_Chr3g0139021 34.783 138 68 5 374 509 263 380 5.40e-15 77.0
Msa1155300 MtrunA17_Chr2g0289181 48.684 76 37 2 241 314 14 89 2.10e-14 72.8
Msa1155300 MtrunA17_Chr2g0289181 49.231 65 32 1 446 509 15 79 2.56e-14 72.4
Msa1155300 MtrunA17_Chr2g0319961 44.928 69 37 1 446 513 81 149 2.93e-14 72.8
Msa1155300 MtrunA17_Chr2g0319961 51.667 60 27 2 242 299 81 140 1.74e-11 64.7
Msa1155300 MtrunA17_Chr7g0228941 45.833 72 38 1 432 502 39 110 3.17e-14 69.3
Msa1155300 MtrunA17_Chr7g0228941 47.368 57 28 2 242 296 53 109 3.31e-11 60.8
Msa1155300 MtrunA17_Chr6g0468181 59.259 54 22 0 257 310 18 71 5.49e-14 68.6
Msa1155300 MtrunA17_Chr7g0248691 45.714 70 37 1 446 514 155 224 6.06e-14 73.2
Msa1155300 MtrunA17_Chr7g0248691 50.000 60 28 2 242 299 155 214 2.89e-11 64.7
Msa1155300 MtrunA17_Chr1g0188961 58.000 50 21 0 465 514 3 52 3.63e-13 64.7
Msa1155300 MtrunA17_Chr8g0387981 50.000 62 27 2 241 298 132 193 7.94e-13 70.1
Msa1155300 MtrunA17_Chr5g0419241 54.348 46 21 0 428 473 60 105 1.87e-12 63.9
Msa1155300 MtrunA17_Chr3g0126391 52.542 59 24 2 240 294 132 190 2.15e-12 68.6
Msa1155300 MtrunA17_Chr3g0126391 32.051 156 76 5 361 503 56 194 3.84e-12 67.8
Msa1155300 MtrunA17_Chr7g0275531 34.951 103 55 5 239 330 116 217 4.80e-11 64.3
Msa1155300 MtrunA17_Chr8g0347251 38.095 84 43 3 229 303 124 207 9.27e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1155300 AT5G56270.1 41.584 505 243 14 35 507 65 549 8.83e-96 305
Msa1155300 AT4G26440.1 52.347 277 120 4 242 517 179 444 1.88e-83 270
Msa1155300 AT4G26440.1 55.000 60 26 1 445 504 178 236 1.10e-12 70.9
Msa1155300 AT4G26440.1 53.226 62 26 2 240 299 371 431 2.00e-12 70.1
Msa1155300 AT4G26640.5 48.881 268 99 6 242 507 36 267 5.14e-73 237
Msa1155300 AT4G26640.5 48.649 74 37 1 443 516 33 105 1.31e-13 72.8
Msa1155300 AT4G26640.6 48.881 268 99 6 242 507 36 267 5.14e-73 237
Msa1155300 AT4G26640.6 48.649 74 37 1 443 516 33 105 1.31e-13 72.8
Msa1155300 AT4G26640.4 48.881 268 99 6 242 507 36 267 5.14e-73 237
Msa1155300 AT4G26640.4 48.649 74 37 1 443 516 33 105 1.31e-13 72.8
Msa1155300 AT4G26640.3 48.881 268 99 6 242 507 36 267 5.14e-73 237
Msa1155300 AT4G26640.3 48.649 74 37 1 443 516 33 105 1.31e-13 72.8
Msa1155300 AT4G26640.1 48.718 273 101 7 242 511 140 376 2.18e-72 238
Msa1155300 AT4G26640.1 48.649 74 37 1 443 516 137 209 1.46e-13 73.6
Msa1155300 AT4G26640.7 48.718 273 101 7 242 511 172 408 2.49e-72 239
Msa1155300 AT4G26640.7 48.649 74 37 1 443 516 169 241 1.36e-13 73.6
Msa1155300 AT4G26640.2 48.718 273 101 7 242 511 212 448 8.18e-72 239
Msa1155300 AT4G26640.2 48.649 74 37 1 443 516 209 281 1.61e-13 73.6
Msa1155300 AT2G03340.1 38.182 440 178 15 81 511 127 481 3.25e-69 231
Msa1155300 AT2G03340.1 57.971 69 28 1 445 513 250 317 1.64e-17 85.9
Msa1155300 AT2G38470.1 48.201 278 114 6 241 516 184 433 9.82e-69 229
Msa1155300 AT2G38470.1 58.824 68 25 2 240 306 361 426 2.30e-14 75.9
Msa1155300 AT1G13960.2 44.195 267 125 4 238 504 73 315 2.33e-66 219
Msa1155300 AT1G13960.1 44.195 267 125 4 238 504 226 468 4.15e-66 223
Msa1155300 AT2G04880.1 36.458 288 147 6 238 511 108 373 2.24e-55 193
Msa1155300 AT2G04880.2 36.429 280 134 6 238 511 108 349 3.50e-55 192
Msa1155300 AT2G37260.3 40.214 281 134 6 230 503 74 327 1.06e-53 185
Msa1155300 AT2G37260.3 52.857 70 32 1 446 515 86 154 9.72e-14 73.2
Msa1155300 AT2G37260.2 40.214 281 134 6 230 503 72 325 1.17e-53 185
Msa1155300 AT2G37260.2 52.857 70 32 1 446 515 84 152 1.01e-13 73.2
Msa1155300 AT2G37260.1 40.714 280 134 7 230 503 154 407 3.00e-53 186
Msa1155300 AT2G37260.1 52.857 70 32 1 446 515 166 234 1.06e-13 73.6
Msa1155300 AT5G07100.2 54.615 130 42 3 378 507 91 203 3.19e-39 142
Msa1155300 AT5G07100.2 47.664 107 50 2 238 343 21 122 1.31e-22 96.7
Msa1155300 AT5G07100.2 48.611 72 35 1 445 516 24 93 8.66e-15 73.9
Msa1155300 AT5G07100.2 55.072 69 29 2 240 307 140 207 1.44e-13 70.5
Msa1155300 AT5G07100.4 54.615 130 42 3 378 507 91 203 3.19e-39 142
Msa1155300 AT5G07100.4 47.664 107 50 2 238 343 21 122 1.31e-22 96.7
Msa1155300 AT5G07100.4 48.611 72 35 1 445 516 24 93 8.66e-15 73.9
Msa1155300 AT5G07100.4 55.072 69 29 2 240 307 140 207 1.44e-13 70.5
Msa1155300 AT5G07100.5 54.615 130 42 3 378 507 91 203 3.19e-39 142
Msa1155300 AT5G07100.5 47.664 107 50 2 238 343 21 122 1.31e-22 96.7
Msa1155300 AT5G07100.5 48.611 72 35 1 445 516 24 93 8.66e-15 73.9
Msa1155300 AT5G07100.5 55.072 69 29 2 240 307 140 207 1.44e-13 70.5
Msa1155300 AT5G07100.3 54.615 130 42 3 378 507 91 203 3.19e-39 142
Msa1155300 AT5G07100.3 47.664 107 50 2 238 343 21 122 1.31e-22 96.7
Msa1155300 AT5G07100.3 48.611 72 35 1 445 516 24 93 8.66e-15 73.9
Msa1155300 AT5G07100.3 55.072 69 29 2 240 307 140 207 1.44e-13 70.5
Msa1155300 AT5G07100.1 54.615 130 42 3 378 507 184 296 9.71e-39 144
Msa1155300 AT5G07100.1 49.038 104 47 2 238 340 114 212 7.08e-23 99.8
Msa1155300 AT5G07100.1 38.000 100 49 2 428 516 89 186 1.12e-14 75.5
Msa1155300 AT5G07100.1 55.072 69 29 2 240 307 233 300 6.77e-14 73.2
Msa1155300 AT4G12020.3 38.095 231 106 5 238 465 465 661 4.51e-36 144
Msa1155300 AT4G12020.3 50.820 61 29 1 444 504 467 526 3.67e-11 66.6
Msa1155300 AT4G12020.2 38.095 231 106 5 238 465 465 661 4.52e-36 144
Msa1155300 AT4G12020.2 50.820 61 29 1 444 504 467 526 3.67e-11 66.6
Msa1155300 AT4G12020.10 38.095 231 106 5 238 465 465 661 5.02e-36 144
Msa1155300 AT4G12020.10 50.820 61 29 1 444 504 467 526 3.76e-11 66.6
Msa1155300 AT4G12020.1 38.095 231 106 5 238 465 465 661 5.20e-36 144
Msa1155300 AT4G12020.1 50.820 61 29 1 444 504 467 526 3.94e-11 66.6
Msa1155300 AT4G12020.9 38.095 231 106 5 238 465 465 661 5.20e-36 144
Msa1155300 AT4G12020.9 50.820 61 29 1 444 504 467 526 3.94e-11 66.6
Msa1155300 AT4G12020.7 38.095 231 106 5 238 465 465 661 5.29e-36 144
Msa1155300 AT4G12020.7 50.820 61 29 1 444 504 467 526 3.83e-11 66.6
Msa1155300 AT4G12020.4 38.095 231 106 5 238 465 465 661 5.52e-36 144
Msa1155300 AT4G12020.4 50.820 61 29 1 444 504 467 526 3.93e-11 66.6
Msa1155300 AT4G12020.5 38.095 231 106 5 238 465 398 594 5.67e-36 143
Msa1155300 AT4G12020.5 50.820 61 29 1 444 504 400 459 3.98e-11 66.6
Msa1155300 AT4G12020.6 38.095 231 106 5 238 465 465 661 6.22e-36 143
Msa1155300 AT4G12020.6 50.820 61 29 1 444 504 467 526 3.86e-11 66.6
Msa1155300 AT4G12020.8 38.095 231 106 5 238 465 465 661 6.22e-36 143
Msa1155300 AT4G12020.8 50.820 61 29 1 444 504 467 526 3.86e-11 66.6
Msa1155300 AT4G12020.11 38.095 231 106 5 238 465 465 661 8.51e-36 143
Msa1155300 AT4G12020.11 50.820 61 29 1 444 504 467 526 4.87e-11 66.2
Msa1155300 AT3G01080.1 73.418 79 21 0 426 504 287 365 3.05e-35 137
Msa1155300 AT3G01080.1 55.294 85 38 0 238 322 164 248 4.10e-24 105
Msa1155300 AT3G01080.1 60.656 61 23 1 240 299 305 365 9.66e-15 76.6
Msa1155300 AT3G01080.1 55.556 63 27 1 445 507 167 228 2.73e-14 75.5
Msa1155300 AT3G01080.2 73.418 79 21 0 426 504 325 403 3.19e-35 137
Msa1155300 AT3G01080.2 55.294 85 38 0 238 322 202 286 2.69e-24 106
Msa1155300 AT3G01080.2 60.656 61 23 1 240 299 343 403 6.84e-15 77.4
Msa1155300 AT3G01080.2 55.556 63 27 1 445 507 205 266 2.82e-14 75.5
Msa1155300 AT2G30250.1 66.667 81 27 0 426 506 309 389 2.20e-32 128
Msa1155300 AT2G30250.1 58.333 72 27 1 242 310 167 238 4.73e-19 89.7
Msa1155300 AT2G30250.1 53.731 67 30 1 239 304 326 392 2.64e-13 72.0
Msa1155300 AT2G30250.1 46.835 79 36 2 426 504 152 224 3.58e-12 68.6
Msa1155300 AT2G44745.1 60.494 81 31 1 425 505 125 204 9.71e-29 114
Msa1155300 AT2G44745.1 49.351 77 28 2 239 314 143 209 6.82e-15 74.3
Msa1155300 AT1G55600.1 60.440 91 35 1 417 506 278 368 1.40e-28 119
Msa1155300 AT1G55600.1 55.000 60 24 2 242 299 308 366 2.13e-13 72.8
Msa1155300 AT4G30935.1 45.385 130 48 2 393 515 288 401 3.66e-27 114
Msa1155300 AT4G30935.1 50.000 70 34 1 242 310 332 401 4.97e-14 74.7
Msa1155300 AT4G30935.1 50.794 63 29 2 241 302 168 229 2.34e-12 69.7
Msa1155300 AT1G69310.4 48.148 108 55 1 397 503 98 205 1.53e-26 109
Msa1155300 AT1G69310.4 58.621 58 23 1 240 296 146 203 4.67e-15 76.3
Msa1155300 AT1G69310.2 48.148 108 55 1 397 503 98 205 1.53e-26 109
Msa1155300 AT1G69310.2 58.621 58 23 1 240 296 146 203 4.67e-15 76.3
Msa1155300 AT1G69310.1 48.148 108 55 1 397 503 98 205 1.53e-26 109
Msa1155300 AT1G69310.1 58.621 58 23 1 240 296 146 203 4.67e-15 76.3
Msa1155300 AT4G39410.1 53.488 86 40 0 416 501 194 279 1.76e-25 107
Msa1155300 AT4G39410.1 54.098 61 25 2 239 297 221 280 6.48e-13 70.1
Msa1155300 AT3G01080.3 55.294 85 38 0 238 322 202 286 2.45e-25 107
Msa1155300 AT3G01080.3 53.030 66 30 1 445 510 205 269 8.43e-15 75.9
Msa1155300 AT4G18170.1 46.364 110 49 1 406 505 123 232 3.33e-25 106
Msa1155300 AT4G18170.1 55.385 65 28 1 240 303 171 235 1.58e-15 78.2
Msa1155300 AT5G49520.1 60.526 76 30 0 429 504 205 280 5.49e-25 107
Msa1155300 AT5G49520.1 55.385 65 28 1 240 303 220 284 2.13e-15 78.6
Msa1155300 AT1G29860.1 57.692 78 33 0 429 506 120 197 1.00e-24 104
Msa1155300 AT1G29860.1 57.971 69 27 2 240 307 135 202 1.15e-16 80.9
Msa1155300 AT5G64810.1 60.563 71 28 0 432 502 97 167 1.62e-24 101
Msa1155300 AT3G01970.1 56.250 80 35 0 432 511 52 131 1.70e-24 99.8
Msa1155300 AT3G01970.1 52.542 59 27 1 240 297 64 122 1.38e-13 68.6
Msa1155300 AT5G41570.1 57.143 77 33 0 425 501 78 154 2.84e-24 100
Msa1155300 AT5G41570.1 50.847 59 28 1 239 296 96 154 5.71e-13 67.8
Msa1155300 AT4G04450.2 46.465 99 52 1 419 516 172 270 5.26e-24 105
Msa1155300 AT4G04450.2 49.231 65 31 2 237 299 194 258 1.90e-12 69.7
Msa1155300 AT5G13080.1 53.846 78 36 0 432 509 54 131 7.48e-24 97.8
Msa1155300 AT5G13080.1 46.875 64 33 1 240 302 66 129 1.43e-12 65.9
Msa1155300 AT5G46350.1 54.545 77 35 0 431 507 169 245 1.50e-23 102
Msa1155300 AT5G46350.1 53.846 65 29 1 240 303 182 246 3.07e-15 77.4
Msa1155300 AT4G04450.1 46.465 99 52 1 419 516 266 364 1.76e-23 104
Msa1155300 AT4G04450.1 49.231 65 31 2 237 299 288 352 4.27e-12 68.9
Msa1155300 AT1G64000.1 55.844 77 34 0 425 501 94 170 2.48e-23 97.8
Msa1155300 AT1G64000.1 50.847 59 28 1 239 296 112 170 3.64e-13 68.9
Msa1155300 AT5G26170.1 55.714 70 31 0 432 501 100 169 3.66e-23 96.7
Msa1155300 AT5G26170.1 50.000 62 30 1 237 297 109 170 2.86e-13 68.6
Msa1155300 AT2G46130.1 55.263 76 34 0 426 501 11 86 4.95e-23 94.4
Msa1155300 AT2G46130.1 59.016 61 24 1 237 296 26 86 1.14e-16 76.3
Msa1155300 AT2G47260.1 56.579 76 33 0 429 504 158 233 7.48e-23 100
Msa1155300 AT2G47260.1 53.846 65 29 1 240 303 173 237 8.01e-16 79.3
Msa1155300 AT5G15130.2 45.556 90 48 1 428 516 168 257 1.68e-22 101
Msa1155300 AT5G15130.2 46.970 66 33 2 239 302 183 248 2.11e-11 66.6
Msa1155300 AT5G15130.1 45.556 90 48 1 428 516 210 299 1.81e-22 101
Msa1155300 AT5G15130.1 46.970 66 33 2 239 302 225 290 2.26e-11 66.6
Msa1155300 AT1G18860.1 47.619 84 43 1 422 504 216 299 2.69e-22 100
Msa1155300 AT1G18860.1 50.794 63 29 2 239 299 237 299 4.56e-11 65.9
Msa1155300 AT1G69310.3 45.370 108 54 2 397 503 98 201 6.47e-22 96.3
Msa1155300 AT4G22070.4 52.564 78 36 1 428 504 280 357 9.44e-22 99.0
Msa1155300 AT4G22070.4 47.692 65 32 2 237 299 293 357 6.18e-12 68.6
Msa1155300 AT4G22070.3 52.564 78 36 1 428 504 280 357 9.44e-22 99.0
Msa1155300 AT4G22070.3 47.692 65 32 2 237 299 293 357 6.18e-12 68.6
Msa1155300 AT4G22070.2 52.564 78 36 1 428 504 280 357 9.44e-22 99.0
Msa1155300 AT4G22070.2 47.692 65 32 2 237 299 293 357 6.18e-12 68.6
Msa1155300 AT4G22070.1 52.564 78 36 1 428 504 280 357 9.44e-22 99.0
Msa1155300 AT4G22070.1 47.692 65 32 2 237 299 293 357 6.18e-12 68.6
Msa1155300 AT1G62300.1 52.564 78 36 1 428 504 295 372 1.08e-21 99.0
Msa1155300 AT1G62300.1 47.692 65 32 2 237 299 308 372 5.90e-12 68.6
Msa1155300 AT2G21900.1 51.316 76 34 1 434 506 95 170 2.74e-21 92.4
Msa1155300 AT2G21900.1 47.541 61 31 1 240 299 108 168 1.54e-12 67.0
Msa1155300 AT1G68150.1 45.556 90 48 1 429 517 219 308 2.83e-21 95.9
Msa1155300 AT1G68150.1 49.206 63 30 2 239 299 233 295 5.09e-11 65.1
Msa1155300 AT4G01720.1 54.545 77 34 1 429 504 223 299 3.83e-21 97.1
Msa1155300 AT4G01720.1 49.231 65 31 2 237 299 235 299 3.70e-12 68.9
Msa1155300 AT3G62340.1 47.191 89 47 0 429 517 102 190 2.24e-20 91.7
Msa1155300 AT3G62340.1 47.436 78 38 2 240 314 117 194 1.94e-13 71.2
Msa1155300 AT2G23320.1 52.500 80 34 2 425 503 223 299 5.36e-20 91.3
Msa1155300 AT2G23320.1 55.172 58 24 2 242 297 241 298 1.83e-12 68.9
Msa1155300 AT4G24240.1 51.250 80 35 2 425 503 264 340 4.11e-19 89.4
Msa1155300 AT4G24240.1 55.172 58 24 2 242 297 282 339 4.48e-13 71.2
Msa1155300 AT1G80840.1 38.596 114 64 3 399 511 105 213 5.97e-19 87.8
Msa1155300 AT1G80840.1 46.032 63 32 2 239 299 144 206 1.73e-11 65.9
Msa1155300 AT2G46130.2 51.316 76 33 1 426 501 11 82 1.64e-18 81.3
Msa1155300 AT2G46130.2 54.098 61 23 2 237 296 26 82 3.22e-12 63.5
Msa1155300 AT4G23550.1 47.674 86 43 2 432 516 128 212 2.10e-18 86.7
Msa1155300 AT4G23550.1 49.315 73 33 3 240 310 139 209 9.30e-13 69.7
Msa1155300 AT5G28650.1 50.000 78 35 2 425 501 245 319 3.18e-18 86.3
Msa1155300 AT5G28650.1 48.438 64 31 2 242 303 263 326 4.59e-11 64.7
Msa1155300 AT4G31550.1 47.674 86 41 2 425 509 229 311 5.33e-18 85.5
Msa1155300 AT4G31550.1 52.632 57 25 2 242 296 247 303 6.25e-11 64.3
Msa1155300 AT4G31550.2 47.674 86 41 2 425 509 228 310 5.37e-18 85.5
Msa1155300 AT4G31550.2 52.632 57 25 2 242 296 246 302 6.32e-11 64.3
Msa1155300 AT3G04670.1 50.000 78 35 2 425 501 245 319 9.63e-18 84.7
Msa1155300 AT3G04670.1 51.562 64 29 2 242 303 263 326 2.69e-11 65.5
Msa1155300 AT2G24570.1 51.282 78 34 2 425 501 226 300 9.65e-18 84.7
Msa1155300 AT2G24570.1 52.632 57 25 2 242 296 244 300 4.04e-11 64.7
Msa1155300 AT2G25000.2 39.560 91 53 2 418 506 75 165 9.99e-18 82.8
Msa1155300 AT2G25000.2 40.860 93 51 3 239 327 101 193 2.50e-12 67.0
Msa1155300 AT2G25000.4 39.560 91 53 2 418 506 75 165 9.99e-18 82.8
Msa1155300 AT2G25000.4 40.860 93 51 3 239 327 101 193 2.50e-12 67.0
Msa1155300 AT2G30590.1 51.282 78 34 2 425 501 296 370 1.01e-17 85.5
Msa1155300 AT2G30590.1 52.542 59 26 2 242 298 314 372 1.74e-11 66.2
Msa1155300 AT2G25000.3 39.560 91 53 2 418 506 97 187 1.09e-17 83.2
Msa1155300 AT2G25000.3 40.860 93 51 3 239 327 123 215 2.64e-12 67.4
Msa1155300 AT2G25000.1 39.560 91 53 2 418 506 118 208 1.81e-17 83.2
Msa1155300 AT2G25000.1 40.860 93 51 3 239 327 144 236 3.93e-12 67.4
Msa1155300 AT1G69810.2 41.304 92 52 2 427 516 127 218 4.32e-16 80.1
Msa1155300 AT1G69810.1 41.304 92 52 2 427 516 185 276 5.39e-16 80.5
Msa1155300 AT5G43290.1 55.932 59 26 0 443 501 112 170 6.81e-16 78.6
Msa1155300 AT5G43290.1 39.394 99 54 2 242 334 115 213 2.13e-11 65.1
Msa1155300 AT4G31800.2 44.444 72 39 1 443 513 109 180 8.07e-16 77.8
Msa1155300 AT2G34830.1 42.000 100 51 2 410 508 186 279 9.38e-16 79.7
Msa1155300 AT2G34830.1 50.000 70 33 2 232 299 206 275 1.19e-13 73.6
Msa1155300 AT2G34830.2 42.000 100 51 2 410 508 195 288 9.74e-16 80.1
Msa1155300 AT2G34830.2 50.000 70 33 2 232 299 215 284 1.24e-13 73.6
Msa1155300 AT1G30650.1 42.000 100 51 2 410 508 188 281 1.24e-15 79.7
Msa1155300 AT1G30650.1 44.304 79 42 2 223 299 199 277 2.77e-13 72.4
Msa1155300 AT4G31800.1 44.444 72 39 1 443 513 174 245 1.30e-15 78.2
Msa1155300 AT4G01250.1 50.000 70 34 1 446 514 129 198 2.48e-15 77.0
Msa1155300 AT4G01250.1 42.353 85 45 3 227 307 114 198 1.08e-12 69.3
Msa1155300 AT5G52830.1 47.143 70 36 1 446 514 166 235 1.65e-14 75.5
Msa1155300 AT5G52830.1 51.429 70 30 3 242 307 166 235 4.05e-13 71.2
Msa1155300 AT1G29280.1 51.667 60 28 1 446 504 75 134 2.86e-14 73.6
Msa1155300 AT1G29280.1 47.059 85 40 4 223 302 53 137 2.20e-13 70.9
Msa1155300 AT3G58710.2 35.252 139 81 4 377 510 2 136 2.89e-14 73.6
Msa1155300 AT3G58710.2 55.556 63 26 2 242 302 71 133 1.19e-12 68.9
Msa1155300 AT3G58710.1 35.252 139 82 4 377 510 2 137 3.01e-14 73.6
Msa1155300 AT3G58710.1 55.556 63 26 2 242 302 72 134 1.15e-12 68.9
Msa1155300 AT5G24110.1 33.333 126 71 4 378 499 54 170 8.45e-13 69.7
Msa1155300 AT5G24110.1 40.698 86 37 4 223 294 85 170 1.74e-11 65.9
Msa1155300 AT5G45050.4 49.231 65 32 1 446 509 1042 1106 9.95e-13 71.6
Msa1155300 AT5G45050.4 53.333 60 26 2 242 299 1042 1101 6.01e-11 65.9
Msa1155300 AT5G45050.1 49.231 65 32 1 446 509 1181 1245 9.97e-13 71.6
Msa1155300 AT5G45050.1 53.333 60 26 2 242 299 1181 1240 6.43e-11 65.9
Msa1155300 AT5G45050.2 49.231 65 32 1 446 509 1153 1217 1.03e-12 71.6
Msa1155300 AT5G45050.2 53.333 60 26 2 242 299 1153 1212 6.98e-11 65.9
Msa1155300 AT1G66560.1 43.056 72 38 1 445 513 103 174 1.36e-11 65.1

Find 113 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAACAATTAAAATATTTA+AGG 0.098737 7_4:+43197700 None:intergenic
TCTCTTTCTGTTCTGCTTCT+AGG 0.173610 7_4:+43195559 None:intergenic
CCTTACAGGATGGTTATAAT+TGG 0.296849 7_4:-43195512 Msa1155300:CDS
TAAAGACTCAACATCAAAAT+TGG 0.304540 7_4:+43197754 None:intergenic
CGATTCTGAGTCGGAATCTT+CGG 0.317084 7_4:+43195023 None:intergenic
GGTTATCGCTGGCGAAAGTA+TGG 0.322826 7_4:-43194793 Msa1155300:CDS
GGTTATAATTGGAGGAAATA+TGG 0.325818 7_4:-43195501 Msa1155300:CDS
AACACAGGACTTGTTCGTTT+TGG 0.332700 7_4:-43198797 Msa1155300:CDS
CAATATGACTACCTTGGGTT+TGG 0.333947 7_4:+43194748 None:intergenic
TTCTGATGTGACCAAGCTTT+CGG 0.344467 7_4:-43195178 Msa1155300:CDS
AATGTTTCCCCGTGTTTCAT+TGG 0.347210 7_4:+43195272 None:intergenic
GATGTCCTTTCTTGATCATC+AGG 0.351359 7_4:+43195207 None:intergenic
TAATTGTCAGGTCAGGAAAA+AGG 0.361390 7_4:-43195421 Msa1155300:CDS
CGAGGCACCATTGTTTCAAC+CGG 0.375364 7_4:+43194880 None:intergenic
ACATAAGAGAAATTATTTAC+AGG 0.376689 7_4:-43195377 Msa1155300:CDS
TGATCATCAGGCTTCCATTC+CGG 0.380639 7_4:+43195219 None:intergenic
GTATGTTCTTACAACTTATG+AGG 0.392134 7_4:-43194336 Msa1155300:CDS
TTACATTTGTAGTAGCTTCT+CGG 0.393877 7_4:+43195450 None:intergenic
TGTAAATAATTTCTCTTATG+TGG 0.405835 7_4:+43195379 None:intergenic
TCTGACATTTCATCACTAGA+AGG 0.422687 7_4:+43195306 None:intergenic
AATGCAGTGGGACTAATTCC+AGG 0.434887 7_4:+43198719 None:intergenic
TGAGATCTAGCTCTCTTCAT+AGG 0.444404 7_4:+43195153 None:intergenic
CTTGGTCACATCAGAAGGTT+GGG 0.455463 7_4:+43195185 None:intergenic
TTTGAATCAGACGACTCTCC+GGG 0.463891 7_4:-43195123 Msa1155300:CDS
ATCAGTCTAATTGTCAGGTC+AGG 0.465422 7_4:-43195428 Msa1155300:CDS
AGCCATGGTGATCGAATTGC+TGG 0.466774 7_4:+43198752 None:intergenic
TGATTGTTATTTCTAGCAGC+AGG 0.467884 7_4:+43194293 Msa1155290:intron
AATAATTGCCACATGATGAA+TGG 0.472511 7_4:-43195732 Msa1155300:CDS
AGCCGGAGCAAAGACCTTAC+AGG 0.475201 7_4:-43195526 Msa1155300:CDS
GTTTGAATCAGACGACTCTC+CGG 0.479499 7_4:-43195124 Msa1155300:CDS
AAACTCCCGGTGGTGGGAGA+TGG 0.482446 7_4:+43197878 None:intergenic
CCTTTCCACATGTTTCCTTA+CGG 0.483981 7_4:+43194376 None:intergenic
CATGGTGAAACTCCCGGTGG+TGG 0.485514 7_4:+43197871 None:intergenic
CATAAGAGAAATTATTTACA+GGG 0.486101 7_4:-43195376 Msa1155300:CDS
TACTACAAATGCACAAGTGC+TGG 0.487847 7_4:-43194404 Msa1155300:CDS
ATGTAATCAGTCTAATTGTC+AGG 0.488649 7_4:-43195433 Msa1155300:CDS
AAGAAGCATAGCTGAGAGAA+GGG 0.496588 7_4:-43198834 Msa1155300:CDS
TACAGGATGGTTATAATTGG+AGG 0.506254 7_4:-43195509 Msa1155300:CDS
AAAGAGATGTCTCGTGCAGC+CGG 0.507051 7_4:-43195543 Msa1155300:CDS
GCTTGGTCACATCAGAAGGT+TGG 0.507741 7_4:+43195184 None:intergenic
TCCGCACTTGCTAATCATGA+TGG 0.511029 7_4:-43195093 Msa1155300:CDS
TATGTTCTTACAACTTATGA+GGG 0.511714 7_4:-43194335 Msa1155300:CDS
AAAAGATGCAAAACACAATC+CGG 0.512398 7_4:-43195238 Msa1155300:CDS
ATCCTGTAAGGTCTTTGCTC+CGG 0.513300 7_4:+43195524 None:intergenic
GTTCTGCTTCTAGGACATGA+TGG 0.513542 7_4:+43195568 None:intergenic
CTTCATAGGATCCGAAAGCT+TGG 0.516828 7_4:+43195167 None:intergenic
CTGCCACCTCTCGTCGATGA+GGG 0.518608 7_4:-43197848 Msa1155300:CDS
CATCGATGTCACTCTCACTT+TGG 0.518656 7_4:+43194827 None:intergenic
CCGACTCAGAATCGAAAAGA+AGG 0.525017 7_4:-43195014 Msa1155300:intron
CCAATTATAACCATCCTGTA+AGG 0.525676 7_4:+43195512 None:intergenic
CGTAAGGAAACATGTGGAAA+GGG 0.527636 7_4:-43194375 Msa1155300:CDS
GAAAGCTTGGTCACATCAGA+AGG 0.536995 7_4:+43195180 None:intergenic
GTCATGCCATCTCCCACCAC+CGG 0.537102 7_4:-43197884 Msa1155300:CDS
TGCTGAAGCCAATGAAACAC+GGG 0.544046 7_4:-43195280 Msa1155300:CDS
AAAGAAGCATAGCTGAGAGA+AGG 0.549713 7_4:-43198835 Msa1155300:CDS
GGAAGCCTGATGATCAAGAA+AGG 0.550805 7_4:-43195212 Msa1155300:CDS
TGAAACAATGGTGCCTCGGA+GGG 0.551047 7_4:-43194875 Msa1155300:CDS
GCAAGTGCGGAAGAATGCCC+CGG 0.553258 7_4:+43195105 None:intergenic
TGGCAGCATGGTGAAACTCC+CGG 0.554532 7_4:+43197865 None:intergenic
ATGGACAGAAGGTTGTCAAA+GGG 0.557821 7_4:-43194774 Msa1155300:CDS
TATGGACAGAAGGTTGTCAA+AGG 0.558376 7_4:-43194775 Msa1155300:CDS
ATGAAGAGAGCTAGATCTCA+AGG 0.562206 7_4:-43195150 Msa1155300:CDS
GCTGCCACCTCTCGTCGATG+AGG 0.566019 7_4:-43197849 Msa1155300:CDS
AGGTGATAAGACTGCTTGAG+TGG 0.567812 7_4:+43195056 None:intergenic
CCGTAAGGAAACATGTGGAA+AGG 0.571889 7_4:-43194376 Msa1155300:CDS
TTGATGCTTGAAATTGAAAG+AGG 0.571978 7_4:+43197778 None:intergenic
TTCTAGCAGCAGGAACCTCA+TGG 0.572737 7_4:+43194303 Msa1155290:intron
CCATGGCTCACAATACCACC+TGG 0.573773 7_4:-43198737 Msa1155300:CDS
ATGCTGAAGCCAATGAAACA+CGG 0.575770 7_4:-43195281 Msa1155300:CDS
GAGCTACCCGGTTGAAACAA+TGG 0.579050 7_4:-43194887 Msa1155300:CDS
ATGCAAAACACAATCCGGAA+TGG 0.585649 7_4:-43195233 Msa1155300:CDS
CGGTTGAAACAATGGTGCCT+CGG 0.589928 7_4:-43194879 Msa1155300:CDS
ATGGTGAAACTCCCGGTGGT+GGG 0.589972 7_4:+43197872 None:intergenic
TCATGCCATCTCCCACCACC+GGG 0.592425 7_4:-43197883 Msa1155300:CDS
TTCGGTCAAACATAAACAAG+TGG 0.596468 7_4:-43197813 Msa1155300:CDS
TACTTGATGATGGTTATCGC+TGG 0.598356 7_4:-43194804 Msa1155300:CDS
CTGGCGAAAGTATGGACAGA+AGG 0.605120 7_4:-43194785 Msa1155300:CDS
GACATCGATGTACTTGATGA+TGG 0.605527 7_4:-43194814 Msa1155300:CDS
CAGGAAGAAGGAGAGCTACC+CGG 0.610711 7_4:-43194899 Msa1155300:CDS
GATCCTCGACGACTTGAACG+TGG 0.613406 7_4:+43195333 None:intergenic
TTGAAACAATGGTGCCTCGG+AGG 0.618982 7_4:-43194876 Msa1155300:CDS
CGAATTGCTGGAGAAACCAA+AGG 0.619482 7_4:+43198764 None:intergenic
ACCATCATGATTAGCAAGTG+CGG 0.620117 7_4:+43195092 None:intergenic
GATCCCTCATCGACGAGAGG+TGG 0.620170 7_4:+43197845 None:intergenic
TATCTCCTCCATTCATCATG+TGG 0.627439 7_4:+43195724 None:intergenic
TTGAAATTGAAAGAGGCAGT+AGG 0.628342 7_4:+43197785 None:intergenic
AATCATGATGGTGATACAGA+TGG 0.629440 7_4:-43195081 Msa1155300:CDS
CAAGTGCTGGATGTACCGTA+AGG 0.637491 7_4:-43194391 Msa1155300:CDS
AGAAGCATAGCTGAGAGAAG+GGG 0.640099 7_4:-43198833 Msa1155300:CDS
GGGGATTCAAGCAATGCAGT+GGG 0.641684 7_4:+43198707 None:intergenic
TCAAAGGGAATCCAAACCCA+AGG 0.645747 7_4:-43194759 Msa1155300:intron
TCAATCCACAGCGAGGACAT+CGG 0.650041 7_4:-43195594 Msa1155300:CDS
ATCGACGAGAGGTGGCAGCA+TGG 0.651677 7_4:+43197853 None:intergenic
GAGGCACCATTGTTTCAACC+GGG 0.652598 7_4:+43194881 None:intergenic
TGAGGGATCAATGATCACTT+CGG 0.653266 7_4:-43197831 Msa1155300:CDS
AATTGCCACATGATGAATGG+AGG 0.654024 7_4:-43195729 Msa1155300:CDS
CCAGGTGGTATTGTGAGCCA+TGG 0.654838 7_4:+43198737 None:intergenic
CGGGGAAACATTCAGTCACG+AGG 0.656337 7_4:-43195261 Msa1155300:CDS
ATGTACCGTAAGGAAACATG+TGG 0.659013 7_4:-43194381 Msa1155300:CDS
AAGGTGGAAAGATCACATGA+TGG 0.666346 7_4:-43195402 Msa1155300:CDS
ATTGATCCCTCATCGACGAG+AGG 0.672996 7_4:+43197842 None:intergenic
CTCCAGCAATTCGATCACCA+TGG 0.675090 7_4:-43198754 Msa1155300:CDS
GGTTTCAATAAAATCAACAC+AGG 0.679076 7_4:-43198812 Msa1155300:CDS
TCACTTTGGACTATCACTCG+TGG 0.680114 7_4:+43194841 None:intergenic
ATAAGAGAAATTATTTACAG+GGG 0.682697 7_4:-43195375 Msa1155300:CDS
TTGAATCAGACGACTCTCCG+GGG 0.693866 7_4:-43195122 Msa1155300:CDS
GGTGTCCGATGTCCTCGCTG+TGG 0.695690 7_4:+43195589 None:intergenic
AAACCACGTTCAAGTCGTCG+AGG 0.697615 7_4:-43195336 Msa1155300:CDS
GGAGCAAAGACCTTACAGGA+TGG 0.707249 7_4:-43195522 Msa1155300:CDS
TGAAAATTCAATCCACAGCG+AGG 0.715022 7_4:-43195601 Msa1155300:CDS
TGAGGGAAAACATAACCATG+AGG 0.727205 7_4:-43194318 Msa1155300:CDS
GCTGAAGCCAATGAAACACG+GGG 0.735702 7_4:-43195279 Msa1155300:CDS
GCAGTGGGACTAATTCCAGG+TGG 0.767254 7_4:+43198722 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATATATTTTTAAATGATAT+TGG + chr7_4:43194749-43194768 None:intergenic 10.0%
!!! ATTGTTATTATAAAAAACAA+AGG - chr7_4:43195559-43195578 Msa1155300:CDS 10.0%
!!! TTGTTATTATAAAAAACAAA+GGG - chr7_4:43195560-43195579 Msa1155300:CDS 10.0%
!!! ATTGTTATTAAAAAAAACAA+AGG - chr7_4:43195803-43195822 Msa1155300:intron 10.0%
!!! TTGTTATTAAAAAAAACAAA+GGG - chr7_4:43195804-43195823 Msa1155300:intron 10.0%
!! TTGTATTTAGATTATATTTA+CGG + chr7_4:43197146-43197165 None:intergenic 10.0%
!! AATAACAATGAAAACAAAAA+TGG - chr7_4:43194325-43194344 Msa1155300:CDS 15.0%
!! ATAACAATGAAAACAAAAAT+GGG - chr7_4:43194326-43194345 Msa1155300:CDS 15.0%
!! TTTAAAAATATATGTTGAGT+TGG - chr7_4:43194755-43194774 Msa1155300:intron 15.0%
!! TCAATCAATTCTAATAAATT+TGG + chr7_4:43195188-43195207 None:intergenic 15.0%
!! ATTATCAAAATTGTAACAAT+CGG + chr7_4:43195288-43195307 None:intergenic 15.0%
!!! TACAATTTTGATAATCTAAA+TGG - chr7_4:43195293-43195312 Msa1155300:CDS 15.0%
!!! TTGTTTTTTACTTTTTATCA+TGG - chr7_4:43195590-43195609 Msa1155300:CDS 15.0%
!!! TTTGTTTTTTACTTTTATCA+TGG - chr7_4:43195833-43195852 Msa1155300:intron 15.0%
!!! TTGTTTTTTACTTTTATCAT+GGG - chr7_4:43195834-43195853 Msa1155300:intron 15.0%
!!! ATATATTTTCAAAAGTTTGA+AGG - chr7_4:43196487-43196506 Msa1155300:intron 15.0%
!! AGTAAAAAATAACTAATATG+TGG + chr7_4:43196971-43196990 None:intergenic 15.0%
!! TAACAATGAAAACAAAAATG+GGG - chr7_4:43194327-43194346 Msa1155300:CDS 20.0%
!! AAATTGTCTCACATATAATA+TGG - chr7_4:43194931-43194950 Msa1155300:intron 20.0%
!!! TTTGATTTTTATGTATGTAG+TGG - chr7_4:43194995-43195014 Msa1155300:intron 20.0%
!! TTATCAAAATTGTAACAATC+GGG + chr7_4:43195287-43195306 None:intergenic 20.0%
!!! TTTGTTTTTTCATGTGTTTT+AGG - chr7_4:43195339-43195358 Msa1155300:CDS 20.0%
!! TGATTTAGAGAAGAAAAATA+GGG + chr7_4:43195520-43195539 None:intergenic 20.0%
!!! TTATTTTTCTTCTCTAAATC+AGG - chr7_4:43195763-43195782 Msa1155300:intron 20.0%
!! ATATAAACTCAACTATTGTA+CGG + chr7_4:43196090-43196109 None:intergenic 20.0%
!! TAGTTGAGTTTATATATGTT+TGG - chr7_4:43196095-43196114 Msa1155300:intron 20.0%
!! AACCTTACTCAATATTTAAA+AGG - chr7_4:43196440-43196459 Msa1155300:intron 20.0%
!!! TTCCTTTTAAATATTGAGTA+AGG + chr7_4:43196445-43196464 None:intergenic 20.0%
!!! TTATGCCTGAATTTAATTTT+TGG - chr7_4:43196681-43196700 Msa1155300:intron 20.0%
!!! AATCAAAATCAATTTTCGTA+AGG - chr7_4:43197205-43197224 Msa1155300:intron 20.0%
!! ACTATGCTTATAAATCTTAA+TGG + chr7_4:43197315-43197334 None:intergenic 20.0%
!! ATGGGATATTTGTTTAAATT+TGG + chr7_4:43197396-43197415 None:intergenic 20.0%
!! ATGAGAAAAATATAGCTTAT+AGG + chr7_4:43197424-43197443 None:intergenic 20.0%
!!! TTTCTAACTAAGTGATATTT+TGG - chr7_4:43197466-43197485 Msa1155300:intron 20.0%
!! TGTAAATAATTTCTCTTATG+TGG + chr7_4:43197869-43197888 None:intergenic 20.0%
!! ACATAAGAGAAATTATTTAC+AGG - chr7_4:43197868-43197887 Msa1155300:CDS 20.0%
!! CATAAGAGAAATTATTTACA+GGG - chr7_4:43197869-43197888 Msa1155300:CDS 20.0%
!! ATAAGAGAAATTATTTACAG+GGG - chr7_4:43197870-43197889 Msa1155300:CDS 20.0%
! AACAATGAAAACAAAAATGG+GGG - chr7_4:43194328-43194347 Msa1155300:CDS 25.0%
!! AAATTAGTTCTTGAAGTTGA+AGG - chr7_4:43194705-43194724 Msa1155300:intron 25.0%
!!! AAATTGCAAATTTGTTGTTG+AGG - chr7_4:43195046-43195065 Msa1155300:CDS 25.0%
! TTAGCATATATTGTTAGATG+GGG + chr7_4:43195095-43195114 None:intergenic 25.0%
! CTTAGCATATATTGTTAGAT+GGG + chr7_4:43195096-43195115 None:intergenic 25.0%
! ACTTAGCATATATTGTTAGA+TGG + chr7_4:43195097-43195116 None:intergenic 25.0%
! TAAAGACTCAACATCAAAAT+TGG + chr7_4:43195494-43195513 None:intergenic 25.0%
! CTGATTTAGAGAAGAAAAAT+AGG + chr7_4:43195521-43195540 None:intergenic 25.0%
!!! CTATTTTTCTTCTCTAAATC+AGG - chr7_4:43195519-43195538 Msa1155300:CDS 25.0%
! TTTATCAAATTGTTGATGCT+TGG - chr7_4:43195630-43195649 Msa1155300:CDS 25.0%
!!! AATGCAATTTGTTAGTGTTA+TGG - chr7_4:43195703-43195722 Msa1155300:CDS 25.0%
! TTTATCAAATTGTTGATGCT+TGG - chr7_4:43195630-43195649 Msa1155300:CDS 25.0%
!!! AATGCAATTTGTTAGTGTTA+CGG - chr7_4:43195703-43195722 Msa1155300:CDS 25.0%
!!! CCATGAAATATTTTAGTATG+AGG + chr7_4:43196358-43196377 None:intergenic 25.0%
! CCTCATACTAAAATATTTCA+TGG - chr7_4:43196355-43196374 Msa1155300:intron 25.0%
! TGATAAAACAAACCAACAAA+TGG - chr7_4:43196518-43196537 Msa1155300:intron 25.0%
! TTAGGCCAAAAATTAAATTC+AGG + chr7_4:43196689-43196708 None:intergenic 25.0%
! AGGGGTAATATTAGTAAAAT+AGG - chr7_4:43196727-43196746 Msa1155300:intron 25.0%
! GGGGTAATATTAGTAAAATA+GGG - chr7_4:43196728-43196747 Msa1155300:intron 25.0%
! AATATTAGTAAAATAGGGAG+TGG - chr7_4:43196733-43196752 Msa1155300:intron 25.0%
!!! TTTTGGGTAGAATTGATTTA+GGG + chr7_4:43197017-43197036 None:intergenic 25.0%
! ATATTTATTTCCTTTCGACA+TGG - chr7_4:43197174-43197193 Msa1155300:intron 25.0%
! AAACACAATTTGTGAAGAAT+AGG - chr7_4:43197236-43197255 Msa1155300:intron 25.0%
! AACACAATTTGTGAAGAATA+GGG - chr7_4:43197237-43197256 Msa1155300:intron 25.0%
!!! GTTTAAGTGTTTCAAGTTTA+TGG + chr7_4:43197361-43197380 None:intergenic 25.0%
!! GTTAGAAAGCTTTCATATTT+TGG + chr7_4:43197454-43197473 None:intergenic 25.0%
! AGTCATTTGAAAAATCTTCT+GGG + chr7_4:43197596-43197615 None:intergenic 25.0%
! AAGTCATTTGAAAAATCTTC+TGG + chr7_4:43197597-43197616 None:intergenic 25.0%
!!! TTGGTTAAATTTTTTGTTGC+AGG - chr7_4:43198327-43198346 Msa1155300:intron 25.0%
!! AATTGTTATTGTTTGTGAGA+TGG - chr7_4:43198586-43198605 Msa1155300:intron 25.0%
!! TGTTTTCAAATAGTGTATAG+TGG - chr7_4:43198623-43198642 Msa1155300:intron 25.0%
! TATGTTCTTACAACTTATGA+GGG - chr7_4:43198910-43198929 Msa1155300:CDS 25.0%
GGTTTCAATAAAATCAACAC+AGG - chr7_4:43194433-43194452 Msa1155300:intron 30.0%
GGATGATCGAAAACTTAAAA+AGG - chr7_4:43194952-43194971 Msa1155300:intron 30.0%
!! AAATTTGTTGTTGAGGTTGA+AGG - chr7_4:43195053-43195072 Msa1155300:CDS 30.0%
ATTGTAACAATCGGGATATT+TGG + chr7_4:43195279-43195298 None:intergenic 30.0%
TTGATGCTTGAAATTGAAAG+AGG + chr7_4:43195470-43195489 None:intergenic 30.0%
! ATTGCATTTTCAACGATTTG+CGG + chr7_4:43195935-43195954 None:intergenic 30.0%
!!! ATAATTTTGCTATTGCGTAG+CGG + chr7_4:43196049-43196068 None:intergenic 30.0%
CGAACTGATGAAAATTTCAT+CGG + chr7_4:43196183-43196202 None:intergenic 30.0%
! CGATGAAATTTTCATCAGTT+CGG - chr7_4:43196181-43196200 Msa1155300:intron 30.0%
! AAATTTTCATCAGTTCGGTT+TGG - chr7_4:43196186-43196205 Msa1155300:intron 30.0%
AAATAAACCGATCAACCTAA+CGG + chr7_4:43196276-43196295 None:intergenic 30.0%
TCCAAACATGTGATTATGTA+GGG + chr7_4:43196945-43196964 None:intergenic 30.0%
ATCCAAACATGTGATTATGT+AGG + chr7_4:43196946-43196965 None:intergenic 30.0%
! TTAGGGTTGGAATGAATTTT+AGG + chr7_4:43197000-43197019 None:intergenic 30.0%
!! CTTTTGGGTAGAATTGATTT+AGG + chr7_4:43197018-43197037 None:intergenic 30.0%
! AGTTGGAAATGTAAGCTTTT+GGG + chr7_4:43197033-43197052 None:intergenic 30.0%
! AAGTTGGAAATGTAAGCTTT+TGG + chr7_4:43197034-43197053 None:intergenic 30.0%
! GCTTACATTTCCAACTTTTT+CGG - chr7_4:43197037-43197056 Msa1155300:intron 30.0%
TATAGCTTATAGGACTGAAT+GGG + chr7_4:43197414-43197433 None:intergenic 30.0%
ATATAGCTTATAGGACTGAA+TGG + chr7_4:43197415-43197434 None:intergenic 30.0%
AATAATTGCCACATGATGAA+TGG - chr7_4:43197513-43197532 Msa1155300:intron 30.0%
GGTTATAATTGGAGGAAATA+TGG - chr7_4:43197744-43197763 Msa1155300:CDS 30.0%
TATGGCCAAAAACATGTAAA+AGG - chr7_4:43197762-43197781 Msa1155300:CDS 30.0%
TTACATTTGTAGTAGCTTCT+CGG + chr7_4:43197798-43197817 None:intergenic 30.0%
ATGTAATCAGTCTAATTGTC+AGG - chr7_4:43197812-43197831 Msa1155300:CDS 30.0%
AAAAGATGCAAAACACAATC+CGG - chr7_4:43198007-43198026 Msa1155300:intron 30.0%
AGACAATCTATATACGTTGT+TGG - chr7_4:43198308-43198327 Msa1155300:intron 30.0%
!!! AATTTTTTGTTGCAGGAAGA+AGG - chr7_4:43198334-43198353 Msa1155300:intron 30.0%
AAAAGCAATATGACTACCTT+GGG + chr7_4:43198505-43198524 None:intergenic 30.0%
AAAAAGCAATATGACTACCT+TGG + chr7_4:43198506-43198525 None:intergenic 30.0%
! TTATACGCATACTAGCTTAT+TGG + chr7_4:43198793-43198812 None:intergenic 30.0%
GTATGTTCTTACAACTTATG+AGG - chr7_4:43198909-43198928 Msa1155300:CDS 30.0%
AATGAAAACAAAAATGGGGG+TGG - chr7_4:43194331-43194350 Msa1155300:CDS 35.0%
CATAGCTATACCTGAGAATT+AGG + chr7_4:43194574-43194593 None:intergenic 35.0%
CAGCTTAGTTGAATCAACTT+GGG + chr7_4:43194857-43194876 None:intergenic 35.0%
TCAGCTTAGTTGAATCAACT+TGG + chr7_4:43194858-43194877 None:intergenic 35.0%
TTCGGTCAAACATAAACAAG+TGG - chr7_4:43195432-43195451 Msa1155300:CDS 35.0%
TTGAAATTGAAAGAGGCAGT+AGG + chr7_4:43195463-43195482 None:intergenic 35.0%
ATGAACCGAACCAAACTAAT+CGG - chr7_4:43196233-43196252 Msa1155300:intron 35.0%
!! TTTAGATCCGTTAGGTTGAT+CGG - chr7_4:43196266-43196285 Msa1155300:intron 35.0%
TGATGAGATGAGATGATGAT+GGG - chr7_4:43196635-43196654 Msa1155300:intron 35.0%
!! GTTTTGAACCAAACTAGACA+AGG - chr7_4:43196850-43196869 Msa1155300:intron 35.0%
!! GTTTAGACTTCTAGTTTCGT+TGG - chr7_4:43196898-43196917 Msa1155300:intron 35.0%
CCAAACATGTGATTATGTAG+GGG + chr7_4:43196944-43196963 None:intergenic 35.0%
! GTTGGAATGAATTTTAGGCT+TGG + chr7_4:43196995-43197014 None:intergenic 35.0%
TTTCATGTCACCGAAAAAGT+TGG + chr7_4:43197050-43197069 None:intergenic 35.0%
!! CGGAAAAAAGTGACTTGTTT+GGG + chr7_4:43197126-43197145 None:intergenic 35.0%
!! ACGGAAAAAAGTGACTTGTT+TGG + chr7_4:43197127-43197146 None:intergenic 35.0%
TTGAATTGATCCATGTCGAA+AGG + chr7_4:43197187-43197206 None:intergenic 35.0%
!! AAGTGTTTCAAGTTTATGGC+TGG + chr7_4:43197357-43197376 None:intergenic 35.0%
TTAGAAACCTGGTGAATTCA+AGG + chr7_4:43197495-43197514 None:intergenic 35.0%
TGTGGCAATTATTAGAAACC+TGG + chr7_4:43197506-43197525 None:intergenic 35.0%
CCAATTATAACCATCCTGTA+AGG + chr7_4:43197736-43197755 None:intergenic 35.0%
CCTTACAGGATGGTTATAAT+TGG - chr7_4:43197733-43197752 Msa1155300:CDS 35.0%
TACAGGATGGTTATAATTGG+AGG - chr7_4:43197736-43197755 Msa1155300:CDS 35.0%
! CACTGCCTTTTACATGTTTT+TGG + chr7_4:43197770-43197789 None:intergenic 35.0%
TAATTGTCAGGTCAGGAAAA+AGG - chr7_4:43197824-43197843 Msa1155300:CDS 35.0%
TCTGACATTTCATCACTAGA+AGG + chr7_4:43197942-43197961 None:intergenic 35.0%
! AATCATGATGGTGATACAGA+TGG - chr7_4:43198164-43198183 Msa1155300:intron 35.0%
! GAATCTTCGGAATTGTTTTC+AGG + chr7_4:43198212-43198231 None:intergenic 35.0%
TACTGTCTTCATGTTAGCAT+TGG - chr7_4:43198271-43198290 Msa1155300:intron 35.0%
! CTTTTTCTTTATGCATCTGC+AGG - chr7_4:43198520-43198539 Msa1155300:intron 35.0%
! TTTTCTTGTCCATCTCTTCT+AGG - chr7_4:43198815-43198834 Msa1155300:CDS 35.0%
!! TGATTGTTATTTCTAGCAGC+AGG + chr7_4:43198955-43198974 None:intergenic 35.0%
! CTCTCAGCTATGCTTCTTTT+TGG + chr7_4:43194409-43194428 None:intergenic 40.0%
! AAAGAAGCATAGCTGAGAGA+AGG - chr7_4:43194410-43194429 Msa1155300:CDS 40.0%
! AAGAAGCATAGCTGAGAGAA+GGG - chr7_4:43194411-43194430 Msa1155300:CDS 40.0%
!! AACACAGGACTTGTTCGTTT+TGG - chr7_4:43194448-43194467 Msa1155300:intron 40.0%
! TGAGAATTAGGAAGCATGAC+GGG + chr7_4:43194562-43194581 None:intergenic 40.0%
! CTGAGAATTAGGAAGCATGA+CGG + chr7_4:43194563-43194582 None:intergenic 40.0%
TGAGGGATCAATGATCACTT+CGG - chr7_4:43195414-43195433 Msa1155300:CDS 40.0%
! TGTACGGTCTTTTCAACTAG+CGG + chr7_4:43196074-43196093 None:intergenic 40.0%
!! CCAAACCGATTAGTTTGGTT+CGG + chr7_4:43196241-43196260 None:intergenic 40.0%
!! CCAAACTAATCGGTTTGGTT+CGG - chr7_4:43196243-43196262 Msa1155300:intron 40.0%
GTGATGAGATGAGATGATGA+TGG - chr7_4:43196634-43196653 Msa1155300:intron 40.0%
!! TGATGATGGGAGAAAGTGAA+TGG - chr7_4:43196648-43196667 Msa1155300:intron 40.0%
CCTCACACTCACTTATGATT+AGG + chr7_4:43196707-43196726 None:intergenic 40.0%
CCTAATCATAAGTGAGTGTG+AGG - chr7_4:43196704-43196723 Msa1155300:intron 40.0%
AATCATAAGTGAGTGTGAGG+AGG - chr7_4:43196707-43196726 Msa1155300:intron 40.0%
ATCATAAGTGAGTGTGAGGA+GGG - chr7_4:43196708-43196727 Msa1155300:intron 40.0%
!! TTAGCATCGGTTTGGTTCAT+CGG - chr7_4:43196758-43196777 Msa1155300:intron 40.0%
TACGAGAAACGAACCAAACA+AGG - chr7_4:43196804-43196823 Msa1155300:intron 40.0%
AGAAACGAACCAAACAAGGT+CGG - chr7_4:43196808-43196827 Msa1155300:intron 40.0%
CAATCTAAACCGACCTTGTT+TGG + chr7_4:43196820-43196839 None:intergenic 40.0%
! CAAACAAGGTCGGTTTAGAT+TGG - chr7_4:43196818-43196837 Msa1155300:intron 40.0%
! AAGGTCGGTTTAGATTGGTT+CGG - chr7_4:43196823-43196842 Msa1155300:intron 40.0%
TGAACCAAACTAGACAAGGT+CGG - chr7_4:43196854-43196873 Msa1155300:intron 40.0%
!!! GGTCGGATGCATTTTTTGTT+TGG - chr7_4:43196871-43196890 Msa1155300:intron 40.0%
! TGATTATGTAGGGGTGTAAG+CGG + chr7_4:43196935-43196954 None:intergenic 40.0%
CCCCTACATAATCACATGTT+TGG - chr7_4:43196941-43196960 Msa1155300:intron 40.0%
! GGGTAGAATTGATTTAGGGT+TGG + chr7_4:43197013-43197032 None:intergenic 40.0%
TTGGTTACCTTGAATTCACC+AGG - chr7_4:43197485-43197504 Msa1155300:intron 40.0%
AATTGCCACATGATGAATGG+AGG - chr7_4:43197516-43197535 Msa1155300:intron 40.0%
TATCTCCTCCATTCATCATG+TGG + chr7_4:43197524-43197543 None:intergenic 40.0%
TGAAAATTCAATCCACAGCG+AGG - chr7_4:43197644-43197663 Msa1155300:intron 40.0%
TCTCTTTCTGTTCTGCTTCT+AGG + chr7_4:43197689-43197708 None:intergenic 40.0%
ATCAGTCTAATTGTCAGGTC+AGG - chr7_4:43197817-43197836 Msa1155300:CDS 40.0%
AAGGTGGAAAGATCACATGA+TGG - chr7_4:43197843-43197862 Msa1155300:CDS 40.0%
ATGCTGAAGCCAATGAAACA+CGG - chr7_4:43197964-43197983 Msa1155300:intron 40.0%
AATGTTTCCCCGTGTTTCAT+TGG + chr7_4:43197976-43197995 None:intergenic 40.0%
ATGCAAAACACAATCCGGAA+TGG - chr7_4:43198012-43198031 Msa1155300:intron 40.0%
GATGTCCTTTCTTGATCATC+AGG + chr7_4:43198041-43198060 None:intergenic 40.0%
TTCTGATGTGACCAAGCTTT+CGG - chr7_4:43198067-43198086 Msa1155300:intron 40.0%
!! TGAGATCTAGCTCTCTTCAT+AGG + chr7_4:43198095-43198114 None:intergenic 40.0%
ATGAAGAGAGCTAGATCTCA+AGG - chr7_4:43198095-43198114 Msa1155300:intron 40.0%
ACCATCATGATTAGCAAGTG+CGG + chr7_4:43198156-43198175 None:intergenic 40.0%
! CCTTCTTTTCGATTCTGAGT+CGG + chr7_4:43198234-43198253 None:intergenic 40.0%
GACATCGATGTACTTGATGA+TGG - chr7_4:43198431-43198450 Msa1155300:intron 40.0%
!! TACTTGATGATGGTTATCGC+TGG - chr7_4:43198441-43198460 Msa1155300:intron 40.0%
TATGGACAGAAGGTTGTCAA+AGG - chr7_4:43198470-43198489 Msa1155300:intron 40.0%
ATGGACAGAAGGTTGTCAAA+GGG - chr7_4:43198471-43198490 Msa1155300:intron 40.0%
CAATATGACTACCTTGGGTT+TGG + chr7_4:43198500-43198519 None:intergenic 40.0%
TAGTGGTATTATAGCACTGC+TGG - chr7_4:43198640-43198659 Msa1155300:intron 40.0%
TACTACAAATGCACAAGTGC+TGG - chr7_4:43198841-43198860 Msa1155300:CDS 40.0%
ATGTACCGTAAGGAAACATG+TGG - chr7_4:43198864-43198883 Msa1155300:CDS 40.0%
CCTTTCCACATGTTTCCTTA+CGG + chr7_4:43198872-43198891 None:intergenic 40.0%
CGTAAGGAAACATGTGGAAA+GGG - chr7_4:43198870-43198889 Msa1155300:CDS 40.0%
TGAGGGAAAACATAACCATG+AGG - chr7_4:43198927-43198946 Msa1155300:CDS 40.0%
! AGAAGCATAGCTGAGAGAAG+GGG - chr7_4:43194412-43194431 Msa1155300:intron 45.0%
!! TTTTGGTGCAACAACGCCTT+TGG - chr7_4:43194465-43194484 Msa1155300:intron 45.0%
CGAATTGCTGGAGAAACCAA+AGG + chr7_4:43194484-43194503 None:intergenic 45.0%
AATGCAGTGGGACTAATTCC+AGG + chr7_4:43194529-43194548 None:intergenic 45.0%
! AGAATTAGGAAGCATGACGG+GGG + chr7_4:43194560-43194579 None:intergenic 45.0%
! GAGAATTAGGAAGCATGACG+GGG + chr7_4:43194561-43194580 None:intergenic 45.0%
CGTCATGCTTCCTAATTCTC+AGG - chr7_4:43194561-43194580 Msa1155300:intron 45.0%
!! GTTGAGTTGGCATGTAGCTT+TGG - chr7_4:43194768-43194787 Msa1155300:CDS 45.0%
! GTTAGCACGTTGTTTAGCTC+AGG - chr7_4:43195115-43195134 Msa1155300:CDS 45.0%
! ATATGTTTGGTTCCACAGCC+AGG - chr7_4:43196108-43196127 Msa1155300:intron 45.0%
!! TCAAACGGTTCGGTTTGGAT+CGG - chr7_4:43196134-43196153 Msa1155300:intron 45.0%
CCGAACCAAACTAATCGGTT+TGG - chr7_4:43196238-43196257 Msa1155300:intron 45.0%
! CCGAACCAAACCGATTAGTT+TGG + chr7_4:43196246-43196265 None:intergenic 45.0%
!! TGGTTCGGTTTAGATCCGTT+AGG - chr7_4:43196258-43196277 Msa1155300:intron 45.0%
CAACAAATGGACGATCTCAG+CGG - chr7_4:43196531-43196550 Msa1155300:intron 45.0%
GTGATGAGGAATGTTGGGTT+AGG - chr7_4:43196553-43196572 Msa1155300:intron 45.0%
! GGAATGTTGGGTTAGGTCAT+AGG - chr7_4:43196560-43196579 Msa1155300:intron 45.0%
TCATAAGTGAGTGTGAGGAG+GGG - chr7_4:43196709-43196728 Msa1155300:intron 45.0%
ATAGGGAGTGGAGTTAGCAT+CGG - chr7_4:43196745-43196764 Msa1155300:intron 45.0%
!! GGTTTGGTTCATCGGTTTCT+TGG - chr7_4:43196766-43196785 Msa1155300:intron 45.0%
!! GTTCTGCTTCTAGGACATGA+TGG + chr7_4:43197680-43197699 None:intergenic 45.0%
ATCCTGTAAGGTCTTTGCTC+CGG + chr7_4:43197724-43197743 None:intergenic 45.0%
TTGTCAGGTCAGGAAAAAGG+TGG - chr7_4:43197827-43197846 Msa1155300:CDS 45.0%
!! GACTTGAACGTGGTTTTGCA+TGG + chr7_4:43197905-43197924 None:intergenic 45.0%
TGCTGAAGCCAATGAAACAC+GGG - chr7_4:43197965-43197984 Msa1155300:intron 45.0%
TGATCATCAGGCTTCCATTC+CGG + chr7_4:43198029-43198048 None:intergenic 45.0%
GGAAGCCTGATGATCAAGAA+AGG - chr7_4:43198033-43198052 Msa1155300:intron 45.0%
CTTGGTCACATCAGAAGGTT+GGG + chr7_4:43198063-43198082 None:intergenic 45.0%
GAAAGCTTGGTCACATCAGA+AGG + chr7_4:43198068-43198087 None:intergenic 45.0%
CTTCATAGGATCCGAAAGCT+TGG + chr7_4:43198081-43198100 None:intergenic 45.0%
GTTTGAATCAGACGACTCTC+CGG - chr7_4:43198121-43198140 Msa1155300:intron 45.0%
TTTGAATCAGACGACTCTCC+GGG - chr7_4:43198122-43198141 Msa1155300:intron 45.0%
! TCCGCACTTGCTAATCATGA+TGG - chr7_4:43198152-43198171 Msa1155300:intron 45.0%
AGGTGATAAGACTGCTTGAG+TGG + chr7_4:43198192-43198211 None:intergenic 45.0%
CGATTCTGAGTCGGAATCTT+CGG + chr7_4:43198225-43198244 None:intergenic 45.0%
CCGACTCAGAATCGAAAAGA+AGG - chr7_4:43198231-43198250 Msa1155300:intron 45.0%
TCACTTTGGACTATCACTCG+TGG + chr7_4:43198407-43198426 None:intergenic 45.0%
CATCGATGTCACTCTCACTT+TGG + chr7_4:43198421-43198440 None:intergenic 45.0%
TCAAAGGGAATCCAAACCCA+AGG - chr7_4:43198486-43198505 Msa1155300:intron 45.0%
ATGCATCTGCAGGTCTGTTT+AGG - chr7_4:43198530-43198549 Msa1155300:intron 45.0%
!!! CTGCAGTTTTTTGCAGTCTG+CGG - chr7_4:43198690-43198709 Msa1155300:intron 45.0%
GTAGTAGCTCCTAGAAGAGA+TGG + chr7_4:43198827-43198846 None:intergenic 45.0%
CCGTAAGGAAACATGTGGAA+AGG - chr7_4:43198869-43198888 Msa1155300:CDS 45.0%
!!! ATATATTTTTAAATGATATT+GGG + chr7_4:43194748-43194767 None:intergenic 5.0%
!! AATAACAATTAAAATATTTA+AGG + chr7_4:43195548-43195567 None:intergenic 5.0%
!! ATAACAATTAAAATATTTAA+GGG + chr7_4:43195547-43195566 None:intergenic 5.0%
!! AATAACAATTAAAATATTTA+AGG + chr7_4:43195548-43195567 None:intergenic 5.0%
CTCCAGCAATTCGATCACCA+TGG - chr7_4:43194491-43194510 Msa1155300:intron 50.0%
AGCCATGGTGATCGAATTGC+TGG + chr7_4:43194496-43194515 None:intergenic 50.0%
GGGGATTCAAGCAATGCAGT+GGG + chr7_4:43194541-43194560 None:intergenic 50.0%
ATTGATCCCTCATCGACGAG+AGG + chr7_4:43195406-43195425 None:intergenic 50.0%
GATCCAAACCGAACCGTTTG+AGG + chr7_4:43196135-43196154 None:intergenic 50.0%
CGCTGAGATCGTCCATTTGT+TGG + chr7_4:43196533-43196552 None:intergenic 50.0%
TCAGCGGTGATGAGGAATGT+TGG - chr7_4:43196547-43196566 Msa1155300:intron 50.0%
CAGCGGTGATGAGGAATGTT+GGG - chr7_4:43196548-43196567 Msa1155300:intron 50.0%
! GTTGGGTTAGGTCATAGGTG+TGG - chr7_4:43196565-43196584 Msa1155300:intron 50.0%
!! GAGTGGAGTTAGCATCGGTT+TGG - chr7_4:43196750-43196769 Msa1155300:intron 50.0%
GCATCCGACCTTGTCTAGTT+TGG + chr7_4:43196861-43196880 None:intergenic 50.0%
! ATGTAGGGGTGTAAGCGGTT+TGG + chr7_4:43196930-43196949 None:intergenic 50.0%
TCAATCCACAGCGAGGACAT+CGG - chr7_4:43197651-43197670 Msa1155300:intron 50.0%
AAAGAGATGTCTCGTGCAGC+CGG - chr7_4:43197702-43197721 Msa1155300:intron 50.0%
GGAGCAAAGACCTTACAGGA+TGG - chr7_4:43197723-43197742 Msa1155300:CDS 50.0%
AAACCACGTTCAAGTCGTCG+AGG - chr7_4:43197909-43197928 Msa1155300:intron 50.0%
GCTGAAGCCAATGAAACACG+GGG - chr7_4:43197966-43197985 Msa1155300:intron 50.0%
GCTTGGTCACATCAGAAGGT+TGG + chr7_4:43198064-43198083 None:intergenic 50.0%
TTGAATCAGACGACTCTCCG+GGG - chr7_4:43198123-43198142 Msa1155300:intron 50.0%
GAGCTACCCGGTTGAAACAA+TGG - chr7_4:43198358-43198377 Msa1155300:intron 50.0%
! GAGGCACCATTGTTTCAACC+GGG + chr7_4:43198367-43198386 None:intergenic 50.0%
! CGAGGCACCATTGTTTCAAC+CGG + chr7_4:43198368-43198387 None:intergenic 50.0%
CGGTTGAAACAATGGTGCCT+CGG - chr7_4:43198366-43198385 Msa1155300:intron 50.0%
TTGAAACAATGGTGCCTCGG+AGG - chr7_4:43198369-43198388 Msa1155300:intron 50.0%
TGAAACAATGGTGCCTCGGA+GGG - chr7_4:43198370-43198389 Msa1155300:intron 50.0%
GGTTATCGCTGGCGAAAGTA+TGG - chr7_4:43198452-43198471 Msa1155300:intron 50.0%
! CTGGCGAAAGTATGGACAGA+AGG - chr7_4:43198460-43198479 Msa1155300:intron 50.0%
CATCTGCAGGTCTGTTTAGG+AGG - chr7_4:43198533-43198552 Msa1155300:intron 50.0%
!! CAAGTGCTGGATGTACCGTA+AGG - chr7_4:43198854-43198873 Msa1155300:CDS 50.0%
TTCTAGCAGCAGGAACCTCA+TGG + chr7_4:43198945-43198964 None:intergenic 50.0%
CCAGGTGGTATTGTGAGCCA+TGG + chr7_4:43194511-43194530 None:intergenic 55.0%
CCATGGCTCACAATACCACC+TGG - chr7_4:43194508-43194527 Msa1155300:intron 55.0%
GCAGTGGGACTAATTCCAGG+TGG + chr7_4:43194526-43194545 None:intergenic 55.0%
GGGGGATTCAAGCAATGCAG+TGG + chr7_4:43194542-43194561 None:intergenic 55.0%
ATGGTGAAACTCCCGGTGGT+GGG + chr7_4:43195376-43195395 None:intergenic 55.0%
TGGCAGCATGGTGAAACTCC+CGG + chr7_4:43195383-43195402 None:intergenic 55.0%
TCCACAGCCAGGACCTCAAA+CGG - chr7_4:43196119-43196138 Msa1155300:intron 55.0%
AGCCAGGACCTCAAACGGTT+CGG - chr7_4:43196124-43196143 Msa1155300:intron 55.0%
! AACCGAACCGTTTGAGGTCC+TGG + chr7_4:43196129-43196148 None:intergenic 55.0%
!! GGACCTCAAACGGTTCGGTT+TGG - chr7_4:43196129-43196148 Msa1155300:intron 55.0%
AGCCGGAGCAAAGACCTTAC+AGG - chr7_4:43197719-43197738 Msa1155300:CDS 55.0%
GATCCTCGACGACTTGAACG+TGG + chr7_4:43197915-43197934 None:intergenic 55.0%
CGGGGAAACATTCAGTCACG+AGG - chr7_4:43197984-43198003 Msa1155300:intron 55.0%
CAGGAAGAAGGAGAGCTACC+CGG - chr7_4:43198346-43198365 Msa1155300:intron 55.0%
GTCATGCCATCTCCCACCAC+CGG - chr7_4:43195361-43195380 Msa1155300:CDS 60.0%
TCATGCCATCTCCCACCACC+GGG - chr7_4:43195362-43195381 Msa1155300:CDS 60.0%
!! AAACTCCCGGTGGTGGGAGA+TGG + chr7_4:43195370-43195389 None:intergenic 60.0%
CATGGTGAAACTCCCGGTGG+TGG + chr7_4:43195377-43195396 None:intergenic 60.0%
CAGCATGGTGAAACTCCCGG+TGG + chr7_4:43195380-43195399 None:intergenic 60.0%
ATCGACGAGAGGTGGCAGCA+TGG + chr7_4:43195395-43195414 None:intergenic 60.0%
CTGCCACCTCTCGTCGATGA+GGG - chr7_4:43195397-43195416 Msa1155300:CDS 60.0%
GATCCCTCATCGACGAGAGG+TGG + chr7_4:43195403-43195422 None:intergenic 60.0%
! ACCGTTTGAGGTCCTGGCTG+TGG + chr7_4:43196123-43196142 None:intergenic 60.0%
GGACGATCTCAGCGGTGATG+AGG - chr7_4:43196539-43196558 Msa1155300:intron 60.0%
GCAAGTGCGGAAGAATGCCC+CGG + chr7_4:43198143-43198162 None:intergenic 60.0%
GCTGCCACCTCTCGTCGATG+AGG - chr7_4:43195396-43195415 Msa1155300:CDS 65.0%
GGTGTCCGATGTCCTCGCTG+TGG + chr7_4:43197659-43197678 None:intergenic 65.0%
GGCGCACGAATTGCCCTCCG+AGG + chr7_4:43198386-43198405 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 43194274 43198993 43194274 ID=Msa1155300;Name=Msa1155300
chr7_4 mRNA 43194274 43198993 43194274 ID=Msa1155300-mRNA-1;Parent=Msa1155300;Name=Msa1155300-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0|0|1|0.75|0.6|5|0|517
chr7_4 exon 43198706 43198993 43198706 ID=Msa1155300-mRNA-1:exon:10844;Parent=Msa1155300-mRNA-1
chr7_4 exon 43197706 43197906 43197706 ID=Msa1155300-mRNA-1:exon:10843;Parent=Msa1155300-mRNA-1
chr7_4 exon 43195015 43195760 43195015 ID=Msa1155300-mRNA-1:exon:10842;Parent=Msa1155300-mRNA-1
chr7_4 exon 43194760 43194918 43194760 ID=Msa1155300-mRNA-1:exon:10841;Parent=Msa1155300-mRNA-1
chr7_4 exon 43194274 43194430 43194274 ID=Msa1155300-mRNA-1:exon:10840;Parent=Msa1155300-mRNA-1
chr7_4 CDS 43198706 43198993 43198706 ID=Msa1155300-mRNA-1:cds;Parent=Msa1155300-mRNA-1
chr7_4 CDS 43197706 43197906 43197706 ID=Msa1155300-mRNA-1:cds;Parent=Msa1155300-mRNA-1
chr7_4 CDS 43195015 43195760 43195015 ID=Msa1155300-mRNA-1:cds;Parent=Msa1155300-mRNA-1
chr7_4 CDS 43194760 43194918 43194760 ID=Msa1155300-mRNA-1:cds;Parent=Msa1155300-mRNA-1
chr7_4 CDS 43194274 43194430 43194274 ID=Msa1155300-mRNA-1:cds;Parent=Msa1155300-mRNA-1
Gene Sequence

>Msa1155300

ATGGAACAAGACAACAACAACAACAACAACAACAACGATAAGATCAACAACAATAACAATGAAAACAAAAATGGGGGTGGTGAAATCAACAATGTTTCTTATTCAAAAGAAGAAAACTTTTTTGATTTTTCACCAAAAAGAAGCATAGCTGAGAGAAGGGGTTTCAATAAAATCAACACAGGACTTGTTCGTTTTGGTGCAACAACGCCTTTGGTTTCTCCAGCAATTCGATCACCATGGCTCACAATACCACCTGGAATTAGTCCCACTGCATTGCTTGAATCCCCCGTCATGCCATCTCCCACCACCGGGAGTTTCACCATGCTGCCACCTCTCGTCGATGAGGGATCAATGATCACTTCGGTCAAACATAAACAAGTGGATGTGCCTACTGCCTCTTTCAATTTCAAGCATCAAGCCAATTTTGATGTTGAGTCTTTATCTCCCTATTTTTCTTCTCTAAATCAGGTAACCTTAAATATTTTAATTGTTTCTAATAATTGCCACATGATGAATGGAGGAGATAGAGACAGTCAAATGCTTGTTCAAGATCAGCAACTGTTAGATTTTTCATTCCCAGAAGATTTTTCAAATGACTTTTTAGCTAGCGATGAAAGCATTCTGCTTGAAAATTCAATCCACAGCGAGGACATCGGACACCATCATGTCCTAGAAGCAGAACAGAAAGAGATGTCTCGTGCAGCCGGAGCAAAGACCTTACAGGATGGTTATAATTGGAGGAAATATGGCCAAAAACATGTAAAAGGCAGTGAATATCCGAGAAGCTACTACAAATGTAATCAGTCTAATTGTCAGGTCAGGAAAAAGGTGGAAAGATCACATGATGGCCACATAAGAGAAATTATTTACAGGGGTGATCATAACCATGCAAAACCACGTTCAAGTCGTCGAGGATCAGTACCTTCTAGTGATGAAATGTCAGAAAATGCTGAAGCCAATGAAACACGGGGAAACATTCAGTCACGAGGAAAAGATGCAAAACACAATCCGGAATGGAAGCCTGATGATCAAGAAAGGACATCCCAACCTTCTGATGTGACCAAGCTTTCGGATCCTATGAAGAGAGCTAGATCTCAAGGTAAGTTTGAATCAGACGACTCTCCGGGGCATTCTTCCGCACTTGCTAATCATGATGGTGATACAGATGGAGCCACTCAAGCAGTCTTATCACCTGAAAACAATTCCGAAGATTCCGACTCAGAATCGAAAAGAAGGAAGAAGGAGAGCTACCCGGTTGAAACAATGGTGCCTCGGAGGGCAATTCGTGCGCCACGAGTGATAGTCCAAAGTGAGAGTGACATCGATGTACTTGATGATGGTTATCGCTGGCGAAAGTATGGACAGAAGGTTGTCAAAGGGAATCCAAACCCAAGGAGCTACTACAAATGCACAAGTGCTGGATGTACCGTAAGGAAACATGTGGAAAGGGCTTCACACAATTTTAAGTATGTTCTTACAACTTATGAGGGAAAACATAACCATGAGGTTCCTGCTGCTAGAAATAACAATCATGCAAGCTCAAGTGCTAAT
Protein sequence

>Msa1155300

MEQDNNNNNNNNDKINNNNNENKNGGGEINNVSYSKEENFFDFSPKRSIAERRGFNKINTGLVRFGATTPLVSPAIRSPWLTIPPGISPTALLESPVMPSPTTGSFTMLPPLVDEGSMITSVKHKQVDVPTASFNFKHQANFDVESLSPYFSSLNQVTLNILIVSNNCHMMNGGDRDSQMLVQDQQLLDFSFPEDFSNDFLASDESILLENSIHSEDIGHHHVLEAEQKEMSRAAGAKTLQDGYNWRKYGQKHVKGSEYPRSYYKCNQSNCQVRKKVERSHDGHIREIIYRGDHNHAKPRSSRRGSVPSSDEMSENAEANETRGNIQSRGKDAKHNPEWKPDDQERTSQPSDVTKLSDPMKRARSQGKFESDDSPGHSSALANHDGDTDGATQAVLSPENNSEDSDSESKRRKKESYPVETMVPRRAIRAPRVIVQSESDIDVLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHNFKYVLTTYEGKHNHEVPAARNNNHASSSAN