Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156300 | AES80446.1 | 70.822 | 706 | 52 | 8 | 1 | 552 | 19 | 724 | 0.0 | 936 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156300 | sp|Q9M219|MTEFH_ARATH | 39.731 | 521 | 229 | 7 | 30 | 465 | 24 | 544 | 1.43e-117 | 362 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156300 | G7KSF7 | 70.822 | 706 | 52 | 8 | 1 | 552 | 19 | 724 | 0.0 | 936 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1156300 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156300 | MtrunA17_Chr7g0249711 | 79.242 | 554 | 26 | 6 | 1 | 465 | 19 | 572 | 0.0 | 857 |
| Msa1156300 | MtrunA17_Chr8g0335121 | 45.688 | 545 | 203 | 9 | 13 | 465 | 9 | 552 | 2.15e-154 | 453 |
| Msa1156300 | MtrunA17_Chr5g0438661 | 20.638 | 533 | 325 | 13 | 20 | 465 | 86 | 607 | 2.58e-19 | 91.7 |
| Msa1156300 | MtrunA17_Chr7g0258521 | 27.673 | 159 | 105 | 4 | 316 | 465 | 302 | 459 | 1.43e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156300 | AT3G60400.1 | 39.731 | 521 | 229 | 7 | 30 | 465 | 24 | 544 | 1.45e-118 | 362 |
| Msa1156300 | AT4G19650.2 | 22.461 | 512 | 298 | 12 | 41 | 465 | 85 | 584 | 1.15e-26 | 114 |
| Msa1156300 | AT4G19650.1 | 22.760 | 413 | 273 | 11 | 87 | 465 | 167 | 567 | 3.77e-21 | 97.8 |
| Msa1156300 | AT5G45113.1 | 25.238 | 420 | 257 | 17 | 87 | 467 | 7 | 408 | 1.16e-14 | 76.6 |
Find 104 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGTGTGCTTTGTGATTT+TGG | 0.070594 | 7_4:-44604826 | Msa1156300:CDS |
| GCTCTATAATTTCATAATTT+TGG | 0.097711 | 7_4:+44603837 | None:intergenic |
| TCTGTGTTTGATGGGGATTT+TGG | 0.152493 | 7_4:+44605152 | None:intergenic |
| TTTGGTAATGTTGAAGTTAT+TGG | 0.228613 | 7_4:-44604697 | Msa1156300:CDS |
| ATTCAATTCTTGAGCGTAAA+AGG | 0.234561 | 7_4:+44603906 | None:intergenic |
| GAGGATGTTATTGAAAATTT+TGG | 0.244503 | 7_4:-44604247 | Msa1156300:CDS |
| TTTGGGGAGGTTTGGGAGGT+TGG | 0.245645 | 7_4:+44605170 | None:intergenic |
| GAAGACGGTGATTAATGTTT+TGG | 0.262397 | 7_4:-44604308 | Msa1156300:CDS |
| ATGGAGAAGAGTTCTATATT+TGG | 0.292885 | 7_4:-44604772 | Msa1156300:CDS |
| TTGGTAATGTTGAAGTTATT+GGG | 0.297592 | 7_4:-44604696 | Msa1156300:CDS |
| TGAAGTCTTGAAGCTTGATT+TGG | 0.297730 | 7_4:-44604332 | Msa1156300:CDS |
| GAAGTTAGGTGTGTTGTATA+TGG | 0.320179 | 7_4:-44604791 | Msa1156300:CDS |
| TGGCATGAACTCTAAAGATT+TGG | 0.329917 | 7_4:-44604269 | Msa1156300:CDS |
| AATTGCTCGAACCAATGTTT+TGG | 0.329948 | 7_4:+44603587 | None:intergenic |
| GGGTTTCCTTGGGAGAAGTT+AGG | 0.333161 | 7_4:-44604805 | Msa1156300:CDS |
| TGGCACAAGCAGTGAGTTAC+AGG | 0.336816 | 7_4:-44603942 | Msa1156300:CDS |
| TGGAGAAGAGTTCTATATTT+GGG | 0.347223 | 7_4:-44604771 | Msa1156300:CDS |
| TTCTTACATAGGTTAGGCTT+TGG | 0.350861 | 7_4:-44604004 | Msa1156300:intron |
| ATGGTTCTGTGATAAGTTAA+AGG | 0.357332 | 7_4:-44604158 | Msa1156300:CDS |
| AAATCAAGCTTCAAGACTTC+AGG | 0.367485 | 7_4:+44604334 | None:intergenic |
| GGGAACAACTTTGGACTGTC+TGG | 0.390764 | 7_4:-44603786 | Msa1156300:CDS |
| AAGTGATAATGCAACATTGC+TGG | 0.398323 | 7_4:+44603755 | None:intergenic |
| TGAAGTTATTGGGATTTGTT+TGG | 0.398881 | 7_4:-44604686 | Msa1156300:CDS |
| AGTTGAAATTGAGGCTTTGT+TGG | 0.399309 | 7_4:-44604735 | Msa1156300:CDS |
| CACTACGTACCAGCATCTCT+TGG | 0.409136 | 7_4:+44601847 | None:intergenic |
| TGCATTGACTATGAATCTCT+TGG | 0.410279 | 7_4:-44603975 | Msa1156300:CDS |
| ATCTGTACCTAGGTATAATT+CGG | 0.410370 | 7_4:+44603726 | None:intergenic |
| CTCATAGCTCTCATCACATT+TGG | 0.412904 | 7_4:+44604190 | None:intergenic |
| ATCGGTGATCATACTTTGAA+TGG | 0.423686 | 7_4:+44603658 | None:intergenic |
| CCAGGAAATGGGAACAACTT+TGG | 0.424489 | 7_4:-44603795 | Msa1156300:intron |
| CTGTAGATTTGGTGGAAAGA+AGG | 0.427510 | 7_4:-44604386 | Msa1156300:intron |
| CATGAACTCTAAAGATTTGG+AGG | 0.437849 | 7_4:-44604266 | Msa1156300:CDS |
| TGGGTTAAAAGACGTGGTTT+TGG | 0.450854 | 7_4:-44604715 | Msa1156300:CDS |
| TTGAAGGAAATGTAGATTCA+TGG | 0.453142 | 7_4:-44604546 | Msa1156300:CDS |
| GTTGAAATTGAGGCTTTGTT+GGG | 0.455136 | 7_4:-44604734 | Msa1156300:CDS |
| AAGATTATCAAGATGGTTTG+AGG | 0.456096 | 7_4:-44604075 | Msa1156300:CDS |
| TCCATACGTGGCTTACAGAA+AGG | 0.471187 | 7_4:-44603703 | Msa1156300:CDS |
| GAGTATTTCTGTAGATTTGG+TGG | 0.485283 | 7_4:-44604394 | Msa1156300:intron |
| GACATGGTTTCTGTGTTTGA+TGG | 0.488783 | 7_4:+44605143 | None:intergenic |
| CCCTTTCTGTAAGCCACGTA+TGG | 0.491041 | 7_4:+44603702 | None:intergenic |
| CGGGATAAAGATTATCAAGA+TGG | 0.492595 | 7_4:-44604082 | Msa1156300:CDS |
| ATAGGTGAAGGGTATGGATT+TGG | 0.493429 | 7_4:+44605077 | None:intergenic |
| AATGGATGGAAGGGTAATGT+AGG | 0.497129 | 7_4:-44604484 | Msa1156300:CDS |
| CCATACGTGGCTTACAGAAA+GGG | 0.498657 | 7_4:-44603702 | Msa1156300:CDS |
| AATCAAGCTTCAAGACTTCA+GGG | 0.502740 | 7_4:+44604335 | None:intergenic |
| TGGTTCTGTGATAAGTTAAA+GGG | 0.503197 | 7_4:-44604157 | Msa1156300:CDS |
| CAAGTGATCGCAATGAAGAC+CGG | 0.503592 | 7_4:-44604102 | Msa1156300:CDS |
| ACATGGTTTCTGTGTTTGAT+GGG | 0.505089 | 7_4:+44605144 | None:intergenic |
| GGAACTGGGTCAAATTCAAA+AGG | 0.507606 | 7_4:-44604641 | Msa1156300:CDS |
| AGTGATAATGCAACATTGCT+GGG | 0.508893 | 7_4:+44603756 | None:intergenic |
| TTCGAATTCCCAAGAGATGC+TGG | 0.515587 | 7_4:-44601856 | Msa1156300:CDS |
| CATCTTGATAATCTTTATCC+CGG | 0.516234 | 7_4:+44604083 | None:intergenic |
| ATTGTGCAGTCTGCTGTCGC+AGG | 0.517118 | 7_4:-44602884 | Msa1156300:CDS |
| AATCTCTTGGATCGTTTGCA+TGG | 0.518346 | 7_4:-44603962 | Msa1156300:CDS |
| AGTTCCTCACTCAAAACAAA+AGG | 0.523057 | 7_4:+44604658 | None:intergenic |
| ACTACGTACCAGCATCTCTT+GGG | 0.532568 | 7_4:+44601848 | None:intergenic |
| CCTCACAAATCTCATTTCAA+AGG | 0.541683 | 7_4:-44605022 | Msa1156300:intron |
| AGGGTATGGATTTGGTGTTG+TGG | 0.544585 | 7_4:+44605085 | None:intergenic |
| AGCAATGTTGCATTATCACT+TGG | 0.545623 | 7_4:-44603753 | Msa1156300:CDS |
| TTGGAGCTGTTGAAACACTT+TGG | 0.546214 | 7_4:-44604289 | Msa1156300:CDS |
| TCTTTGGGGAGTTATGTTGA+AGG | 0.549056 | 7_4:-44604562 | Msa1156300:CDS |
| GTGTTGAAGAGTTGAAATTG+AGG | 0.549592 | 7_4:-44604744 | Msa1156300:CDS |
| GCACAATTCTGCAGCAGCAC+CGG | 0.550245 | 7_4:+44602900 | None:intergenic |
| ATCCAGCTGCTCCAAAACAT+TGG | 0.550499 | 7_4:-44603598 | Msa1156300:intron |
| GTTGCCCATGTGTTCTGCAT+AGG | 0.551348 | 7_4:+44605059 | None:intergenic |
| CTTCACCTATGCAGAACACA+TGG | 0.552095 | 7_4:-44605064 | Msa1156300:CDS |
| CTTTGTTGGGTTAAAAGACG+TGG | 0.557709 | 7_4:-44604721 | Msa1156300:CDS |
| TATGATTTGAATGGATGGAA+GGG | 0.564181 | 7_4:-44604493 | Msa1156300:CDS |
| TAGATTTGGTGGAAAGAAGG+AGG | 0.566105 | 7_4:-44604383 | Msa1156300:CDS |
| ATTCTCAAAGCTCTGCATGA+TGG | 0.566277 | 7_4:-44603885 | Msa1156300:CDS |
| TTATGATTTGAATGGATGGA+AGG | 0.566317 | 7_4:-44604494 | Msa1156300:CDS |
| GGGTAATGTAGGAGAACTCA+TGG | 0.567143 | 7_4:-44604473 | Msa1156300:CDS |
| CATGGTTTCTGTGTTTGATG+GGG | 0.568042 | 7_4:+44605145 | None:intergenic |
| CTTTGAAATGAGATTTGTGA+GGG | 0.572972 | 7_4:+44605023 | None:intergenic |
| GAAGCTTGATTTGGAGAAGA+CGG | 0.577664 | 7_4:-44604323 | Msa1156300:CDS |
| TGTGCTGGGAACAATTAGAA+TGG | 0.585503 | 7_4:-44604221 | Msa1156300:CDS |
| TTTGAGCTTCGTGAATGACA+TGG | 0.585863 | 7_4:+44605127 | None:intergenic |
| AAGTGATCGCAATGAAGACC+GGG | 0.587085 | 7_4:-44604101 | Msa1156300:CDS |
| AGTTAAAGGGTGGACATCAT+CGG | 0.591752 | 7_4:-44604144 | Msa1156300:CDS |
| GGTAATGTAGGAGAACTCAT+GGG | 0.593941 | 7_4:-44604472 | Msa1156300:CDS |
| TTCTGCATAGGTGAAGGGTA+TGG | 0.599546 | 7_4:+44605071 | None:intergenic |
| GAACTGGGTCAAATTCAAAA+GGG | 0.603474 | 7_4:-44604640 | Msa1156300:intron |
| TGGACATCATCGGTTGTTAG+CGG | 0.610567 | 7_4:-44604134 | Msa1156300:CDS |
| ATGTGTTCTGCATAGGTGAA+GGG | 0.610997 | 7_4:+44605066 | None:intergenic |
| TTCTGTGATAAGTTAAAGGG+TGG | 0.612876 | 7_4:-44604154 | Msa1156300:CDS |
| GTATGGATTTGGTGTTGTGG+AGG | 0.614500 | 7_4:+44605088 | None:intergenic |
| AACACACCTAACTTCTCCCA+AGG | 0.625967 | 7_4:+44604799 | None:intergenic |
| GTTGTGGAGGTAGTCAGTGA+GGG | 0.627809 | 7_4:+44605101 | None:intergenic |
| CATGTGTTCTGCATAGGTGA+AGG | 0.630707 | 7_4:+44605065 | None:intergenic |
| AAATGTAGATTCATGGCATG+AGG | 0.630954 | 7_4:-44604539 | Msa1156300:CDS |
| CATACGTGGCTTACAGAAAG+GGG | 0.641305 | 7_4:-44603701 | Msa1156300:CDS |
| TTGTGCAGTCTGCTGTCGCA+GGG | 0.645289 | 7_4:-44602883 | Msa1156300:CDS |
| TAACTTACCATCGTCTCGTG+AGG | 0.646868 | 7_4:+44601791 | None:intergenic |
| GCATCTTCCTCACGAGACGA+TGG | 0.658388 | 7_4:-44601798 | Msa1156300:CDS |
| TGGATGACCGAATTATACCT+AGG | 0.659803 | 7_4:-44603733 | Msa1156300:CDS |
| CTAGGTACAGATTCCATACG+TGG | 0.660432 | 7_4:-44603715 | Msa1156300:CDS |
| GTAATGTAGGAGAACTCATG+GGG | 0.661705 | 7_4:-44604471 | Msa1156300:CDS |
| TGTTGTGGAGGTAGTCAGTG+AGG | 0.663801 | 7_4:+44605100 | None:intergenic |
| ATGTAGGAGAACTCATGGGG+AGG | 0.683085 | 7_4:-44604468 | Msa1156300:CDS |
| CACGTATGGAATCTGTACCT+AGG | 0.683828 | 7_4:+44603716 | None:intergenic |
| TTCACCTATGCAGAACACAT+GGG | 0.692667 | 7_4:-44605063 | Msa1156300:CDS |
| CTTTCATATAAGCAAGACAC+CGG | 0.694224 | 7_4:-44602919 | Msa1156300:CDS |
| CCTTTGAAATGAGATTTGTG+AGG | 0.730568 | 7_4:+44605022 | None:intergenic |
| GCGGTGGAGGAAGAAGAACA+TGG | 0.740499 | 7_4:+44605215 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTAGATAATTCTTT+GGG | - | chr7_4:44602448-44602467 | Msa1156300:intron | 10.0% |
| !! | AAAATAATATTTCCATATAT+TGG | + | chr7_4:44603907-44603926 | None:intergenic | 10.0% |
| !!! | GATTTTTTTAGATAATTCTT+TGG | - | chr7_4:44602447-44602466 | Msa1156300:intron | 15.0% |
| !!! | TTTTTTTAGATAATTCTTTG+GGG | - | chr7_4:44602449-44602468 | Msa1156300:intron | 15.0% |
| !!! | TTACTATTAACAGTAATTTT+AGG | + | chr7_4:44604074-44604093 | None:intergenic | 15.0% |
| !! | TGAAATGATATTCTATTTAA+AGG | - | chr7_4:44604534-44604553 | Msa1156300:CDS | 15.0% |
| !! | TATTCTATTTAAAGGAAAAA+TGG | - | chr7_4:44604542-44604561 | Msa1156300:CDS | 15.0% |
| !!! | TATAATGATTTTTTCTGTTT+TGG | - | chr7_4:44605058-44605077 | Msa1156300:CDS | 15.0% |
| !!! | TTAATGTTATTTGAGAAAGT+GGG | + | chr7_4:44602043-44602062 | None:intergenic | 20.0% |
| !!! | TTTAATGTTATTTGAGAAAG+TGG | + | chr7_4:44602044-44602063 | None:intergenic | 20.0% |
| !! | ATAACATTAAAAGAGTCATT+AGG | - | chr7_4:44602053-44602072 | Msa1156300:intron | 20.0% |
| !!! | ATAAGTTGAATTTCTTACAT+AGG | - | chr7_4:44603010-44603029 | Msa1156300:intron | 20.0% |
| !!! | GCTCTATAATTTCATAATTT+TGG | + | chr7_4:44603191-44603210 | None:intergenic | 20.0% |
| !! | ATAATAAGTATCTTCAGAAT+AGG | + | chr7_4:44604032-44604051 | None:intergenic | 20.0% |
| !!! | AGTAATTTTAGGAAATAGTT+AGG | + | chr7_4:44604063-44604082 | None:intergenic | 20.0% |
| !! | AAAAAGAATCGCATTTAATT+TGG | - | chr7_4:44604481-44604500 | Msa1156300:CDS | 20.0% |
| !! | AATAGAATATCATTTCATTC+TGG | + | chr7_4:44604531-44604550 | None:intergenic | 20.0% |
| !!! | AAAGCTTAGTTTTTTCAAAT+TGG | - | chr7_4:44604640-44604659 | Msa1156300:intron | 20.0% |
| !!! | TTGATTTTGTCTTGTTATAA+TGG | - | chr7_4:44604695-44604714 | Msa1156300:CDS | 20.0% |
| !!! | TGATTTTGTCTTGTTATAAT+GGG | - | chr7_4:44604696-44604715 | Msa1156300:CDS | 20.0% |
| !! | AAGATACACATGATAAATAA+AGG | + | chr7_4:44604913-44604932 | None:intergenic | 20.0% |
| ! | AAGACTTCAAATTCGTTAAT+GGG | + | chr7_4:44602085-44602104 | None:intergenic | 25.0% |
| ! | AAAGACTTCAAATTCGTTAA+TGG | + | chr7_4:44602086-44602105 | None:intergenic | 25.0% |
| !!! | AAGTCTTTTTTGAAAGCATA+GGG | - | chr7_4:44602098-44602117 | Msa1156300:intron | 25.0% |
| ! | GAAAAGAACAACTTATCATT+GGG | + | chr7_4:44602154-44602173 | None:intergenic | 25.0% |
| ! | TGAAAAGAACAACTTATCAT+TGG | + | chr7_4:44602155-44602174 | None:intergenic | 25.0% |
| !!! | TTTGGTAATGTTGAAGTTAT+TGG | - | chr7_4:44602328-44602347 | Msa1156300:intron | 25.0% |
| !!! | TTGGTAATGTTGAAGTTATT+GGG | - | chr7_4:44602329-44602348 | Msa1156300:intron | 25.0% |
| !!! | CGATTGTTTTATGATTTGAA+TGG | - | chr7_4:44602523-44602542 | Msa1156300:intron | 25.0% |
| !! | TGTTTTATGATTTGAATGGA+TGG | - | chr7_4:44602527-44602546 | Msa1156300:intron | 25.0% |
| !! | GAGGATGTTATTGAAAATTT+TGG | - | chr7_4:44602778-44602797 | Msa1156300:intron | 25.0% |
| ! | TTGAATTTCTTACATAGGTT+AGG | - | chr7_4:44603015-44603034 | Msa1156300:intron | 25.0% |
| !!! | AAAAGTGAATTTTTTCAACC+AGG | - | chr7_4:44603212-44603231 | Msa1156300:intron | 25.0% |
| !!! | AATTTTTTCAACCAGGAAAT+GGG | - | chr7_4:44603219-44603238 | Msa1156300:intron | 25.0% |
| !! | TACAAATTTCTTTTCGCTAT+CGG | + | chr7_4:44603388-44603407 | None:intergenic | 25.0% |
| ! | ATTATTACATTGGCAATTGA+CGG | + | chr7_4:44603470-44603489 | None:intergenic | 25.0% |
| ! | AATTGCCAATGTAATAATTG+CGG | - | chr7_4:44603472-44603491 | Msa1156300:intron | 25.0% |
| ! | AAATACCGCAATTATTACAT+TGG | + | chr7_4:44603480-44603499 | None:intergenic | 25.0% |
| ! | ATACATTCTTACACTATACT+AGG | + | chr7_4:44603506-44603525 | None:intergenic | 25.0% |
| !! | TTTTGTACATGACCAATATA+TGG | - | chr7_4:44603892-44603911 | Msa1156300:CDS | 25.0% |
| !!! | TTTGGAAACTGATTTTTAAG+TGG | - | chr7_4:44604373-44604392 | Msa1156300:CDS | 25.0% |
| !! | CTTTGAAATGAGATTTGTGA+GGG | + | chr7_4:44602005-44602024 | None:intergenic | 30.0% |
| AGACTTCAAATTCGTTAATG+GGG | + | chr7_4:44602084-44602103 | None:intergenic | 30.0% | |
| !!! | GAAGTCTTTTTTGAAAGCAT+AGG | - | chr7_4:44602097-44602116 | Msa1156300:intron | 30.0% |
| CATAGGGATAGATTATACTT+TGG | - | chr7_4:44602114-44602133 | Msa1156300:intron | 30.0% | |
| ATGGAGAAGAGTTCTATATT+TGG | - | chr7_4:44602253-44602272 | Msa1156300:intron | 30.0% | |
| TGGAGAAGAGTTCTATATTT+GGG | - | chr7_4:44602254-44602273 | Msa1156300:intron | 30.0% | |
| ! | TGAAGTTATTGGGATTTGTT+TGG | - | chr7_4:44602339-44602358 | Msa1156300:intron | 30.0% |
| !!! | TTTTCCTTTTGTTTTGAGTG+AGG | - | chr7_4:44602363-44602382 | Msa1156300:intron | 30.0% |
| !!! | CAAATTCAAAAGGGTGTTTT+TGG | - | chr7_4:44602394-44602413 | Msa1156300:intron | 30.0% |
| TTGAAGGAAATGTAGATTCA+TGG | - | chr7_4:44602479-44602498 | Msa1156300:intron | 30.0% | |
| TTATGATTTGAATGGATGGA+AGG | - | chr7_4:44602531-44602550 | Msa1156300:intron | 30.0% | |
| TATGATTTGAATGGATGGAA+GGG | - | chr7_4:44602532-44602551 | Msa1156300:intron | 30.0% | |
| ! | GTAGAGTATTTCTGTAGATT+TGG | - | chr7_4:44602628-44602647 | Msa1156300:intron | 30.0% |
| ! | ATGGTTCTGTGATAAGTTAA+AGG | - | chr7_4:44602867-44602886 | Msa1156300:CDS | 30.0% |
| ! | TGGTTCTGTGATAAGTTAAA+GGG | - | chr7_4:44602868-44602887 | Msa1156300:CDS | 30.0% |
| ! | CATCTTGATAATCTTTATCC+CGG | + | chr7_4:44602945-44602964 | None:intergenic | 30.0% |
| AAGATTATCAAGATGGTTTG+AGG | - | chr7_4:44602950-44602969 | Msa1156300:intron | 30.0% | |
| ATTCAATTCTTGAGCGTAAA+AGG | + | chr7_4:44603122-44603141 | None:intergenic | 30.0% | |
| !!! | AATTTTGGTTCAGAATCCTT+GGG | + | chr7_4:44603176-44603195 | None:intergenic | 30.0% |
| !!! | TAATTTTGGTTCAGAATCCT+TGG | + | chr7_4:44603177-44603196 | None:intergenic | 30.0% |
| !!! | GAATTTTTTCAACCAGGAAA+TGG | - | chr7_4:44603218-44603237 | Msa1156300:intron | 30.0% |
| ATCTGTACCTAGGTATAATT+CGG | + | chr7_4:44603302-44603321 | None:intergenic | 30.0% | |
| ! | TGGATGAATTTTAAACACTC+GGG | + | chr7_4:44603412-44603431 | None:intergenic | 30.0% |
| ! | CTGGATGAATTTTAAACACT+CGG | + | chr7_4:44603413-44603432 | None:intergenic | 30.0% |
| ! | TTTTTGTAGGCCATTCTTTA+TGG | + | chr7_4:44603644-44603663 | None:intergenic | 30.0% |
| ! | TATTTGTTGGACCAAATTTC+AGG | - | chr7_4:44603682-44603701 | Msa1156300:CDS | 30.0% |
| ATCATCAAACAATGAACTTC+AGG | + | chr7_4:44603721-44603740 | None:intergenic | 30.0% | |
| ACTTTATGTAGGATGGTAAT+TGG | - | chr7_4:44603791-44603810 | Msa1156300:CDS | 30.0% | |
| TTTCGTTCATATTCAGATCA+TGG | - | chr7_4:44603941-44603960 | Msa1156300:CDS | 30.0% | |
| !! | TAAACTTTGAGACGTCTATA+TGG | - | chr7_4:44603992-44604011 | Msa1156300:CDS | 30.0% |
| TTGCTTTAATGCAATTGAGA+CGG | - | chr7_4:44604311-44604330 | Msa1156300:CDS | 30.0% | |
| TTGCAGAAACAAATGAGATT+TGG | - | chr7_4:44604355-44604374 | Msa1156300:CDS | 30.0% | |
| !!! | TGATTTTTAAGTGGACGAAA+TGG | - | chr7_4:44604382-44604401 | Msa1156300:CDS | 30.0% |
| AAATGGAATGTAACAGGATA+GGG | - | chr7_4:44604399-44604418 | Msa1156300:intron | 30.0% | |
| !! | GCATTTAATTTGGCTAACAA+CGG | - | chr7_4:44604491-44604510 | Msa1156300:CDS | 30.0% |
| AAAAATGGCAAACATTTCAG+AGG | - | chr7_4:44604557-44604576 | Msa1156300:CDS | 30.0% | |
| ATCATGTAAAACATTTGGCT+TGG | - | chr7_4:44604586-44604605 | Msa1156300:intron | 30.0% | |
| !!! | GCTTAGTTTTTTCAAATTGG+TGG | - | chr7_4:44604643-44604662 | Msa1156300:CDS | 30.0% |
| AACTTTGCAGACAAAAAAGT+TGG | + | chr7_4:44604674-44604693 | None:intergenic | 30.0% | |
| !! | TTTGTCTTGTTATAATGGGT+AGG | - | chr7_4:44604700-44604719 | Msa1156300:CDS | 30.0% |
| ! | TGTATCTTAAAGTAGTTCTG+TGG | - | chr7_4:44604925-44604944 | Msa1156300:intron | 30.0% |
| !!! | TTTTTGTGGTGGTGGAAAAA+TGG | + | chr7_4:44601835-44601854 | None:intergenic | 35.0% |
| ACATGGTTTCTGTGTTTGAT+GGG | + | chr7_4:44601884-44601903 | None:intergenic | 35.0% | |
| !! | CCTTTGAAATGAGATTTGTG+AGG | + | chr7_4:44602006-44602025 | None:intergenic | 35.0% |
| CCTCACAAATCTCATTTCAA+AGG | - | chr7_4:44602003-44602022 | Msa1156300:intron | 35.0% | |
| ! | CTTGTGTGCTTTGTGATTTT+GGG | - | chr7_4:44602200-44602219 | Msa1156300:intron | 35.0% |
| !!! | TTTGTGATTTTGGGTTTCCT+TGG | - | chr7_4:44602209-44602228 | Msa1156300:intron | 35.0% |
| !!! | TTGTGATTTTGGGTTTCCTT+GGG | - | chr7_4:44602210-44602229 | Msa1156300:intron | 35.0% |
| GAAGTTAGGTGTGTTGTATA+TGG | - | chr7_4:44602234-44602253 | Msa1156300:intron | 35.0% | |
| GTGTTGAAGAGTTGAAATTG+AGG | - | chr7_4:44602281-44602300 | Msa1156300:intron | 35.0% | |
| ! | AGTTGAAATTGAGGCTTTGT+TGG | - | chr7_4:44602290-44602309 | Msa1156300:intron | 35.0% |
| !! | GTTGAAATTGAGGCTTTGTT+GGG | - | chr7_4:44602291-44602310 | Msa1156300:intron | 35.0% |
| AGTTCCTCACTCAAAACAAA+AGG | + | chr7_4:44602370-44602389 | None:intergenic | 35.0% | |
| !!! | TTTTGTTTTGAGTGAGGAAC+TGG | - | chr7_4:44602369-44602388 | Msa1156300:intron | 35.0% |
| !!! | TTTGTTTTGAGTGAGGAACT+GGG | - | chr7_4:44602370-44602389 | Msa1156300:intron | 35.0% |
| GAACTGGGTCAAATTCAAAA+GGG | - | chr7_4:44602385-44602404 | Msa1156300:intron | 35.0% | |
| AAATGTAGATTCATGGCATG+AGG | - | chr7_4:44602486-44602505 | Msa1156300:intron | 35.0% | |
| ! | GAGTATTTCTGTAGATTTGG+TGG | - | chr7_4:44602631-44602650 | Msa1156300:intron | 35.0% |
| AATCAAGCTTCAAGACTTCA+GGG | + | chr7_4:44602693-44602712 | None:intergenic | 35.0% | |
| AAATCAAGCTTCAAGACTTC+AGG | + | chr7_4:44602694-44602713 | None:intergenic | 35.0% | |
| TGAAGTCTTGAAGCTTGATT+TGG | - | chr7_4:44602693-44602712 | Msa1156300:intron | 35.0% | |
| ! | GAAGACGGTGATTAATGTTT+TGG | - | chr7_4:44602717-44602736 | Msa1156300:intron | 35.0% |
| ! | TGGCATGAACTCTAAAGATT+TGG | - | chr7_4:44602756-44602775 | Msa1156300:intron | 35.0% |
| ! | CATGAACTCTAAAGATTTGG+AGG | - | chr7_4:44602759-44602778 | Msa1156300:intron | 35.0% |
| !! | TGAAAATTTTGGTCATGTGC+TGG | - | chr7_4:44602789-44602808 | Msa1156300:intron | 35.0% |
| !! | GAAAATTTTGGTCATGTGCT+GGG | - | chr7_4:44602790-44602809 | Msa1156300:intron | 35.0% |
| GAGCTATGAGTTTGAAAGAA+TGG | - | chr7_4:44602848-44602867 | Msa1156300:intron | 35.0% | |
| TTCTGTGATAAGTTAAAGGG+TGG | - | chr7_4:44602871-44602890 | Msa1156300:CDS | 35.0% | |
| CGGGATAAAGATTATCAAGA+TGG | - | chr7_4:44602943-44602962 | Msa1156300:intron | 35.0% | |
| TTCTTACATAGGTTAGGCTT+TGG | - | chr7_4:44603021-44603040 | Msa1156300:intron | 35.0% | |
| !! | TGCATTGACTATGAATCTCT+TGG | - | chr7_4:44603050-44603069 | Msa1156300:intron | 35.0% |
| !!! | ATTTTGGTTCAGAATCCTTG+GGG | + | chr7_4:44603175-44603194 | None:intergenic | 35.0% |
| ! | AGTGATAATGCAACATTGCT+GGG | + | chr7_4:44603272-44603291 | None:intergenic | 35.0% |
| ! | AAGTGATAATGCAACATTGC+TGG | + | chr7_4:44603273-44603292 | None:intergenic | 35.0% |
| AGCAATGTTGCATTATCACT+TGG | - | chr7_4:44603272-44603291 | Msa1156300:intron | 35.0% | |
| ATCGGTGATCATACTTTGAA+TGG | + | chr7_4:44603370-44603389 | None:intergenic | 35.0% | |
| ! | AATTGCTCGAACCAATGTTT+TGG | + | chr7_4:44603441-44603460 | None:intergenic | 35.0% |
| ! | ACGCAAGACAAGATTTTTGT+AGG | + | chr7_4:44603657-44603676 | None:intergenic | 35.0% |
| TCTTGCGTTGCATTATTTGT+TGG | - | chr7_4:44603669-44603688 | Msa1156300:CDS | 35.0% | |
| !! | ACCAAATTTCAGGTTAGAGA+AGG | - | chr7_4:44603692-44603711 | Msa1156300:CDS | 35.0% |
| TCCTTCTCTAACCTGAAATT+TGG | + | chr7_4:44603696-44603715 | None:intergenic | 35.0% | |
| TCGTGTATCTGACTTTATGT+AGG | - | chr7_4:44603780-44603799 | Msa1156300:CDS | 35.0% | |
| GTATCTGACTTTATGTAGGA+TGG | - | chr7_4:44603784-44603803 | Msa1156300:CDS | 35.0% | |
| TGTAGGATGGTAATTGGTAA+AGG | - | chr7_4:44603797-44603816 | Msa1156300:intron | 35.0% | |
| !! | TTCAGATCATGGACTTGTTT+TGG | - | chr7_4:44603952-44603971 | Msa1156300:CDS | 35.0% |
| CTTTCATATAAGCAAGACAC+CGG | - | chr7_4:44604106-44604125 | Msa1156300:CDS | 35.0% | |
| GAAATGGAATGTAACAGGAT+AGG | - | chr7_4:44604398-44604417 | Msa1156300:intron | 35.0% | |
| TTCATACCCTTCAATTCTGT+TGG | - | chr7_4:44604441-44604460 | Msa1156300:CDS | 35.0% | |
| GGTGGATCATGTAAAACATT+TGG | - | chr7_4:44604581-44604600 | Msa1156300:intron | 35.0% | |
| !! | TAAAACATTTGGCTTGGTCT+CGG | - | chr7_4:44604592-44604611 | Msa1156300:intron | 35.0% |
| !! | TCTTGTTATAATGGGTAGGA+TGG | - | chr7_4:44604704-44604723 | Msa1156300:CDS | 35.0% |
| ATAGCTTCTTCATTGCTACA+GGG | + | chr7_4:44604737-44604756 | None:intergenic | 35.0% | |
| ! | ATGTAACTGTACGTTGACTA+TGG | - | chr7_4:44604965-44604984 | Msa1156300:intron | 35.0% |
| !!! | TTTCTGTTTTGGAGTTGCAT+TGG | - | chr7_4:44605069-44605088 | Msa1156300:CDS | 35.0% |
| ! | TGTGTTTGATGGGGATTTTG+GGG | + | chr7_4:44601874-44601893 | None:intergenic | 40.0% |
| ! | CTGTGTTTGATGGGGATTTT+GGG | + | chr7_4:44601875-44601894 | None:intergenic | 40.0% |
| ! | TCTGTGTTTGATGGGGATTT+TGG | + | chr7_4:44601876-44601895 | None:intergenic | 40.0% |
| CATGGTTTCTGTGTTTGATG+GGG | + | chr7_4:44601883-44601902 | None:intergenic | 40.0% | |
| GACATGGTTTCTGTGTTTGA+TGG | + | chr7_4:44601885-44601904 | None:intergenic | 40.0% | |
| TTTGAGCTTCGTGAATGACA+TGG | + | chr7_4:44601901-44601920 | None:intergenic | 40.0% | |
| ! | ATAGGTGAAGGGTATGGATT+TGG | + | chr7_4:44601951-44601970 | None:intergenic | 40.0% |
| ATGTGTTCTGCATAGGTGAA+GGG | + | chr7_4:44601962-44601981 | None:intergenic | 40.0% | |
| TTCACCTATGCAGAACACAT+GGG | - | chr7_4:44601962-44601981 | Msa1156300:intron | 40.0% | |
| ! | GCTTGTGTGCTTTGTGATTT+TGG | - | chr7_4:44602199-44602218 | Msa1156300:intron | 40.0% |
| CTTTGTTGGGTTAAAAGACG+TGG | - | chr7_4:44602304-44602323 | Msa1156300:intron | 40.0% | |
| ! | TGGGTTAAAAGACGTGGTTT+TGG | - | chr7_4:44602310-44602329 | Msa1156300:intron | 40.0% |
| GGAACTGGGTCAAATTCAAA+AGG | - | chr7_4:44602384-44602403 | Msa1156300:intron | 40.0% | |
| ! | TCTTTGGGGAGTTATGTTGA+AGG | - | chr7_4:44602463-44602482 | Msa1156300:intron | 40.0% |
| AATGGATGGAAGGGTAATGT+AGG | - | chr7_4:44602541-44602560 | Msa1156300:intron | 40.0% | |
| GGTAATGTAGGAGAACTCAT+GGG | - | chr7_4:44602553-44602572 | Msa1156300:intron | 40.0% | |
| GTAATGTAGGAGAACTCATG+GGG | - | chr7_4:44602554-44602573 | Msa1156300:intron | 40.0% | |
| !! | CTGTAGATTTGGTGGAAAGA+AGG | - | chr7_4:44602639-44602658 | Msa1156300:intron | 40.0% |
| !! | TAGATTTGGTGGAAAGAAGG+AGG | - | chr7_4:44602642-44602661 | Msa1156300:intron | 40.0% |
| !! | GAAGCTTGATTTGGAGAAGA+CGG | - | chr7_4:44602702-44602721 | Msa1156300:intron | 40.0% |
| TTGGAGCTGTTGAAACACTT+TGG | - | chr7_4:44602736-44602755 | Msa1156300:intron | 40.0% | |
| TGTGCTGGGAACAATTAGAA+TGG | - | chr7_4:44602804-44602823 | Msa1156300:intron | 40.0% | |
| CTCATAGCTCTCATCACATT+TGG | + | chr7_4:44602838-44602857 | None:intergenic | 40.0% | |
| AGTTAAAGGGTGGACATCAT+CGG | - | chr7_4:44602881-44602900 | Msa1156300:CDS | 40.0% | |
| AATCTCTTGGATCGTTTGCA+TGG | - | chr7_4:44603063-44603082 | Msa1156300:intron | 40.0% | |
| ATTCTCAAAGCTCTGCATGA+TGG | - | chr7_4:44603140-44603159 | Msa1156300:intron | 40.0% | |
| TGATGGTAAGAAAAACCCCA+AGG | - | chr7_4:44603157-44603176 | Msa1156300:intron | 40.0% | |
| TGGATGACCGAATTATACCT+AGG | - | chr7_4:44603292-44603311 | Msa1156300:intron | 40.0% | |
| !!! | GCTCATATTTTGGTGCTAAC+TGG | - | chr7_4:44603845-44603864 | Msa1156300:CDS | 40.0% |
| !!! | ATGGACTTGTTTTGGCAACA+AGG | - | chr7_4:44603960-44603979 | Msa1156300:CDS | 40.0% |
| ! | AGACGTCTATATGGTCTTGA+AGG | - | chr7_4:44604001-44604020 | Msa1156300:intron | 40.0% |
| ! | GTGCACAACAGCTTTTAACA+GGG | + | chr7_4:44604229-44604248 | None:intergenic | 40.0% |
| ! | AGTGCACAACAGCTTTTAAC+AGG | + | chr7_4:44604230-44604249 | None:intergenic | 40.0% |
| TGGACGAAATGGAATGTAAC+AGG | - | chr7_4:44604393-44604412 | Msa1156300:intron | 40.0% | |
| ACCCTTCAATTCTGTTGGTA+AGG | - | chr7_4:44604446-44604465 | Msa1156300:CDS | 40.0% | |
| CCCTTACCAACAGAATTGAA+GGG | + | chr7_4:44604450-44604469 | None:intergenic | 40.0% | |
| ! | CCCTTCAATTCTGTTGGTAA+GGG | - | chr7_4:44604447-44604466 | Msa1156300:CDS | 40.0% |
| TCCCTTACCAACAGAATTGA+AGG | + | chr7_4:44604451-44604470 | None:intergenic | 40.0% | |
| AATGGCAAACATTTCAGAGG+TGG | - | chr7_4:44604560-44604579 | Msa1156300:CDS | 40.0% | |
| TTGGTCTCGGTTCATTAGTA+GGG | - | chr7_4:44604605-44604624 | Msa1156300:intron | 40.0% | |
| CATAGCTTCTTCATTGCTAC+AGG | + | chr7_4:44604738-44604757 | None:intergenic | 40.0% | |
| ATGGTGATTTCGAAAGTCTG+CGG | - | chr7_4:44604795-44604814 | Msa1156300:CDS | 40.0% | |
| ! | GTATTGAGTGAGTTGAGATG+TGG | - | chr7_4:44604876-44604895 | Msa1156300:intron | 40.0% |
| !! | TTGTGGTGGTGGAAAAATGG+CGG | + | chr7_4:44601832-44601851 | None:intergenic | 45.0% |
| !!! | GTTTGGGAGGTTGGTTTTTG+TGG | + | chr7_4:44601849-44601868 | None:intergenic | 45.0% |
| !! | GTATGGATTTGGTGTTGTGG+AGG | + | chr7_4:44601940-44601959 | None:intergenic | 45.0% |
| !! | AGGGTATGGATTTGGTGTTG+TGG | + | chr7_4:44601943-44601962 | None:intergenic | 45.0% |
| TTCTGCATAGGTGAAGGGTA+TGG | + | chr7_4:44601957-44601976 | None:intergenic | 45.0% | |
| CATGTGTTCTGCATAGGTGA+AGG | + | chr7_4:44601963-44601982 | None:intergenic | 45.0% | |
| CTTCACCTATGCAGAACACA+TGG | - | chr7_4:44601961-44601980 | Msa1156300:intron | 45.0% | |
| AACACACCTAACTTCTCCCA+AGG | + | chr7_4:44602229-44602248 | None:intergenic | 45.0% | |
| GGGTAATGTAGGAGAACTCA+TGG | - | chr7_4:44602552-44602571 | Msa1156300:intron | 45.0% | |
| ! | TGGACATCATCGGTTGTTAG+CGG | - | chr7_4:44602891-44602910 | Msa1156300:CDS | 45.0% |
| CAAGTGATCGCAATGAAGAC+CGG | - | chr7_4:44602923-44602942 | Msa1156300:CDS | 45.0% | |
| AAGTGATCGCAATGAAGACC+GGG | - | chr7_4:44602924-44602943 | Msa1156300:CDS | 45.0% | |
| CCAAAGTTGTTCCCATTTCC+TGG | + | chr7_4:44603233-44603252 | None:intergenic | 45.0% | |
| CCAGGAAATGGGAACAACTT+TGG | - | chr7_4:44603230-44603249 | Msa1156300:intron | 45.0% | |
| CACGTATGGAATCTGTACCT+AGG | + | chr7_4:44603312-44603331 | None:intergenic | 45.0% | |
| CTAGGTACAGATTCCATACG+TGG | - | chr7_4:44603310-44603329 | Msa1156300:intron | 45.0% | |
| TCCATACGTGGCTTACAGAA+AGG | - | chr7_4:44603322-44603341 | Msa1156300:intron | 45.0% | |
| CCATACGTGGCTTACAGAAA+GGG | - | chr7_4:44603323-44603342 | Msa1156300:intron | 45.0% | |
| CATACGTGGCTTACAGAAAG+GGG | - | chr7_4:44603324-44603343 | Msa1156300:intron | 45.0% | |
| ATCCAGCTGCTCCAAAACAT+TGG | - | chr7_4:44603427-44603446 | Msa1156300:intron | 45.0% | |
| !!! | AACCAATGTTTTGGAGCAGC+TGG | + | chr7_4:44603432-44603451 | None:intergenic | 45.0% |
| ACTCACCGAGCCATAAAGAA+TGG | - | chr7_4:44603631-44603650 | Msa1156300:CDS | 45.0% | |
| GTAGGCCATTCTTTATGGCT+CGG | + | chr7_4:44603639-44603658 | None:intergenic | 45.0% | |
| AGGCCAAAGTCAGACAAAGA+CGG | - | chr7_4:44603817-44603836 | Msa1156300:intron | 45.0% | |
| GGGAAAACATTCGACGTTTC+CGG | + | chr7_4:44604209-44604228 | None:intergenic | 45.0% | |
| ! | TCTAGTTTCCGGACAGTAGA+GGG | - | chr7_4:44604254-44604273 | Msa1156300:CDS | 45.0% |
| TTGATTACCCCTCTACTGTC+CGG | + | chr7_4:44604265-44604284 | None:intergenic | 45.0% | |
| AACAGGATAGGGTGACAAGT+TGG | - | chr7_4:44604410-44604429 | Msa1156300:intron | 45.0% | |
| CTTGGTCTCGGTTCATTAGT+AGG | - | chr7_4:44604604-44604623 | Msa1156300:intron | 45.0% | |
| GCTTGCAGTACTCAATCAGA+TGG | - | chr7_4:44604776-44604795 | Msa1156300:CDS | 45.0% | |
| TTCGAAAGTCTGCGGATGTA+TGG | - | chr7_4:44604803-44604822 | Msa1156300:CDS | 45.0% | |
| GAGCAAACTAGCACAAGATG+TGG | + | chr7_4:44605000-44605019 | None:intergenic | 45.0% | |
| TTCGAATTCCCAAGAGATGC+TGG | - | chr7_4:44605169-44605188 | Msa1156300:CDS | 45.0% | |
| ACTACGTACCAGCATCTCTT+GGG | + | chr7_4:44605180-44605199 | None:intergenic | 45.0% | |
| TAACTTACCATCGTCTCGTG+AGG | + | chr7_4:44605237-44605256 | None:intergenic | 45.0% | |
| !!! | GAGGTTGGTTTTTGTGGTGG+TGG | + | chr7_4:44601843-44601862 | None:intergenic | 50.0% |
| !!! | TGGGAGGTTGGTTTTTGTGG+TGG | + | chr7_4:44601846-44601865 | None:intergenic | 50.0% |
| !! | TGGGGATTTTGGGGAGGTTT+GGG | + | chr7_4:44601865-44601884 | None:intergenic | 50.0% |
| !! | ATGGGGATTTTGGGGAGGTT+TGG | + | chr7_4:44601866-44601885 | None:intergenic | 50.0% |
| !! | GTTTGATGGGGATTTTGGGG+AGG | + | chr7_4:44601871-44601890 | None:intergenic | 50.0% |
| GTTGTGGAGGTAGTCAGTGA+GGG | + | chr7_4:44601927-44601946 | None:intergenic | 50.0% | |
| TGTTGTGGAGGTAGTCAGTG+AGG | + | chr7_4:44601928-44601947 | None:intergenic | 50.0% | |
| GTTGCCCATGTGTTCTGCAT+AGG | + | chr7_4:44601969-44601988 | None:intergenic | 50.0% | |
| GGGTTTCCTTGGGAGAAGTT+AGG | - | chr7_4:44602220-44602239 | Msa1156300:intron | 50.0% | |
| ATGTAGGAGAACTCATGGGG+AGG | - | chr7_4:44602557-44602576 | Msa1156300:intron | 50.0% | |
| TGGCACAAGCAGTGAGTTAC+AGG | - | chr7_4:44603083-44603102 | Msa1156300:intron | 50.0% | |
| GGGAACAACTTTGGACTGTC+TGG | - | chr7_4:44603239-44603258 | Msa1156300:intron | 50.0% | |
| CCCTTTCTGTAAGCCACGTA+TGG | + | chr7_4:44603326-44603345 | None:intergenic | 50.0% | |
| CGACCGTCTTTGTCTGACTT+TGG | + | chr7_4:44603823-44603842 | None:intergenic | 50.0% | |
| AAGTCAGACAAAGACGGTCG+AGG | - | chr7_4:44603823-44603842 | Msa1156300:intron | 50.0% | |
| ! | GACGGTCGAGGCTCATATTT+TGG | - | chr7_4:44603835-44603854 | Msa1156300:CDS | 50.0% |
| !! | CGTTTGCTGTTCCATTTGCG+TGG | - | chr7_4:44604180-44604199 | Msa1156300:intron | 50.0% |
| TGTTCCATTTGCGTGGCTTC+CGG | - | chr7_4:44604187-44604206 | Msa1156300:intron | 50.0% | |
| ! | GTGCACTGCTGTCTAGTTTC+CGG | - | chr7_4:44604243-44604262 | Msa1156300:CDS | 50.0% |
| ! | GTCTAGTTTCCGGACAGTAG+AGG | - | chr7_4:44604253-44604272 | Msa1156300:CDS | 50.0% |
| CTAGTTTCCGGACAGTAGAG+GGG | - | chr7_4:44604255-44604274 | Msa1156300:CDS | 50.0% | |
| ! | AGGATAGGGTGACAAGTTGG+TGG | - | chr7_4:44604413-44604432 | Msa1156300:intron | 50.0% |
| GGCAAACATTTCAGAGGTGG+TGG | - | chr7_4:44604563-44604582 | Msa1156300:CDS | 50.0% | |
| GCTATGCTGCTGTTGACAAG+TGG | - | chr7_4:44604752-44604771 | Msa1156300:CDS | 50.0% | |
| GTGATGCTGGAGGTTCTGTT+GGG | - | chr7_4:44604825-44604844 | Msa1156300:CDS | 50.0% | |
| TGATGCTGGAGGTTCTGTTG+GGG | - | chr7_4:44604826-44604845 | Msa1156300:CDS | 50.0% | |
| CTGTTGGGGTAATCTGATGC+TGG | - | chr7_4:44604840-44604859 | Msa1156300:CDS | 50.0% | |
| !! | GGGTAATCTGATGCTGGTTC+TGG | - | chr7_4:44604846-44604865 | Msa1156300:intron | 50.0% |
| CACTACGTACCAGCATCTCT+TGG | + | chr7_4:44605181-44605200 | None:intergenic | 50.0% | |
| GCGGTGGAGGAAGAAGAACA+TGG | + | chr7_4:44601813-44601832 | None:intergenic | 55.0% | |
| TGGTGGAAAAATGGCGGTGG+AGG | + | chr7_4:44601826-44601845 | None:intergenic | 55.0% | |
| !! | TGGTGGTGGAAAAATGGCGG+TGG | + | chr7_4:44601829-44601848 | None:intergenic | 55.0% |
| TTTGGGGAGGTTTGGGAGGT+TGG | + | chr7_4:44601858-44601877 | None:intergenic | 55.0% | |
| !! | GGATTTTGGGGAGGTTTGGG+AGG | + | chr7_4:44601862-44601881 | None:intergenic | 55.0% |
| GCACAATTCTGCAGCAGCAC+CGG | + | chr7_4:44604128-44604147 | None:intergenic | 55.0% | |
| ATTGTGCAGTCTGCTGTCGC+AGG | - | chr7_4:44604141-44604160 | Msa1156300:CDS | 55.0% | |
| TTGTGCAGTCTGCTGTCGCA+GGG | - | chr7_4:44604142-44604161 | Msa1156300:CDS | 55.0% | |
| GTTTCCGGAAGCCACGCAAA+TGG | + | chr7_4:44604194-44604213 | None:intergenic | 55.0% | |
| ! | CTGCGGATGTATGGTGATGC+TGG | - | chr7_4:44604812-44604831 | Msa1156300:CDS | 55.0% |
| ! | CGGATGTATGGTGATGCTGG+AGG | - | chr7_4:44604815-44604834 | Msa1156300:CDS | 55.0% |
| GGTGATGCTGGAGGTTCTGT+TGG | - | chr7_4:44604824-44604843 | Msa1156300:CDS | 55.0% | |
| GCATCTTCCTCACGAGACGA+TGG | - | chr7_4:44605227-44605246 | Msa1156300:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 44601788 | 44605259 | 44601788 | ID=Msa1156300;Name=Msa1156300 |
| chr7_4 | mRNA | 44601788 | 44605259 | 44601788 | ID=Msa1156300-mRNA-1;Parent=Msa1156300;Name=Msa1156300-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|0|0.1|10|0|552 |
| chr7_4 | exon | 44605023 | 44605259 | 44605023 | ID=Msa1156300-mRNA-1:exon:11525;Parent=Msa1156300-mRNA-1 |
| chr7_4 | exon | 44604641 | 44604863 | 44604641 | ID=Msa1156300-mRNA-1:exon:11524;Parent=Msa1156300-mRNA-1 |
| chr7_4 | exon | 44604415 | 44604589 | 44604415 | ID=Msa1156300-mRNA-1:exon:11523;Parent=Msa1156300-mRNA-1 |
| chr7_4 | exon | 44604191 | 44604402 | 44604191 | ID=Msa1156300-mRNA-1:exon:11522;Parent=Msa1156300-mRNA-1 |
| chr7_4 | exon | 44604034 | 44604181 | 44604034 | ID=Msa1156300-mRNA-1:exon:11521;Parent=Msa1156300-mRNA-1 |
| chr7_4 | exon | 44603832 | 44604015 | 44603832 | ID=Msa1156300-mRNA-1:exon:11520;Parent=Msa1156300-mRNA-1 |
| chr7_4 | exon | 44603599 | 44603813 | 44603599 | ID=Msa1156300-mRNA-1:exon:11519;Parent=Msa1156300-mRNA-1 |
| chr7_4 | exon | 44603223 | 44603228 | 44603223 | ID=Msa1156300-mRNA-1:exon:11518;Parent=Msa1156300-mRNA-1 |
| chr7_4 | exon | 44602867 | 44602948 | 44602867 | ID=Msa1156300-mRNA-1:exon:11517;Parent=Msa1156300-mRNA-1 |
| chr7_4 | exon | 44601788 | 44601964 | 44601788 | ID=Msa1156300-mRNA-1:exon:11516;Parent=Msa1156300-mRNA-1 |
| chr7_4 | CDS | 44605023 | 44605259 | 44605023 | ID=Msa1156300-mRNA-1:cds;Parent=Msa1156300-mRNA-1 |
| chr7_4 | CDS | 44604641 | 44604863 | 44604641 | ID=Msa1156300-mRNA-1:cds;Parent=Msa1156300-mRNA-1 |
| chr7_4 | CDS | 44604415 | 44604589 | 44604415 | ID=Msa1156300-mRNA-1:cds;Parent=Msa1156300-mRNA-1 |
| chr7_4 | CDS | 44604191 | 44604402 | 44604191 | ID=Msa1156300-mRNA-1:cds;Parent=Msa1156300-mRNA-1 |
| chr7_4 | CDS | 44604034 | 44604181 | 44604034 | ID=Msa1156300-mRNA-1:cds;Parent=Msa1156300-mRNA-1 |
| chr7_4 | CDS | 44603832 | 44604015 | 44603832 | ID=Msa1156300-mRNA-1:cds;Parent=Msa1156300-mRNA-1 |
| chr7_4 | CDS | 44603599 | 44603813 | 44603599 | ID=Msa1156300-mRNA-1:cds;Parent=Msa1156300-mRNA-1 |
| chr7_4 | CDS | 44603223 | 44603228 | 44603223 | ID=Msa1156300-mRNA-1:cds;Parent=Msa1156300-mRNA-1 |
| chr7_4 | CDS | 44602867 | 44602948 | 44602867 | ID=Msa1156300-mRNA-1:cds;Parent=Msa1156300-mRNA-1 |
| chr7_4 | CDS | 44601788 | 44601964 | 44601788 | ID=Msa1156300-mRNA-1:cds;Parent=Msa1156300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
