AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1159770


Find 320 sgRNAs with CRISPR-Local

Find 765 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr7_4 gene 49456454 49466779 49456454 ID=Msa1159770;Name=Msa1159770
chr7_4 mRNA 49456454 49466779 49456454 ID=Msa1159770-mRNA-1;Parent=Msa1159770;Name=Msa1159770-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.95|0.90|1|0.95|0.90|22|362|1385
chr7_4 exon 49456454 49456749 49456454 ID=Msa1159770-mRNA-1:exon:13610;Parent=Msa1159770-mRNA-1
chr7_4 exon 49456770 49457099 49456770 ID=Msa1159770-mRNA-1:exon:13609;Parent=Msa1159770-mRNA-1
chr7_4 exon 49457968 49458126 49457968 ID=Msa1159770-mRNA-1:exon:13608;Parent=Msa1159770-mRNA-1
chr7_4 exon 49458284 49458478 49458284 ID=Msa1159770-mRNA-1:exon:13607;Parent=Msa1159770-mRNA-1
chr7_4 exon 49458700 49458856 49458700 ID=Msa1159770-mRNA-1:exon:13606;Parent=Msa1159770-mRNA-1
chr7_4 exon 49458956 49459050 49458956 ID=Msa1159770-mRNA-1:exon:13605;Parent=Msa1159770-mRNA-1
chr7_4 exon 49459179 49459286 49459179 ID=Msa1159770-mRNA-1:exon:13604;Parent=Msa1159770-mRNA-1
chr7_4 exon 49459390 49459647 49459390 ID=Msa1159770-mRNA-1:exon:13603;Parent=Msa1159770-mRNA-1
chr7_4 exon 49459759 49460304 49459759 ID=Msa1159770-mRNA-1:exon:13602;Parent=Msa1159770-mRNA-1
chr7_4 exon 49460729 49460875 49460729 ID=Msa1159770-mRNA-1:exon:13601;Parent=Msa1159770-mRNA-1
chr7_4 exon 49461046 49461276 49461046 ID=Msa1159770-mRNA-1:exon:13600;Parent=Msa1159770-mRNA-1
chr7_4 exon 49461914 49461971 49461914 ID=Msa1159770-mRNA-1:exon:13599;Parent=Msa1159770-mRNA-1
chr7_4 exon 49462056 49462217 49462056 ID=Msa1159770-mRNA-1:exon:13598;Parent=Msa1159770-mRNA-1
chr7_4 exon 49462532 49462657 49462532 ID=Msa1159770-mRNA-1:exon:13597;Parent=Msa1159770-mRNA-1
chr7_4 exon 49463981 49464153 49463981 ID=Msa1159770-mRNA-1:exon:13596;Parent=Msa1159770-mRNA-1
chr7_4 exon 49464232 49464312 49464232 ID=Msa1159770-mRNA-1:exon:13595;Parent=Msa1159770-mRNA-1
chr7_4 exon 49464392 49464500 49464392 ID=Msa1159770-mRNA-1:exon:13594;Parent=Msa1159770-mRNA-1
chr7_4 exon 49464679 49465097 49464679 ID=Msa1159770-mRNA-1:exon:13593;Parent=Msa1159770-mRNA-1
chr7_4 exon 49465560 49465670 49465560 ID=Msa1159770-mRNA-1:exon:13592;Parent=Msa1159770-mRNA-1
chr7_4 exon 49465820 49466029 49465820 ID=Msa1159770-mRNA-1:exon:13591;Parent=Msa1159770-mRNA-1
chr7_4 exon 49466127 49466559 49466127 ID=Msa1159770-mRNA-1:exon:13590;Parent=Msa1159770-mRNA-1
chr7_4 exon 49466664 49466779 49466664 ID=Msa1159770-mRNA-1:exon:13589;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49466664 49466779 49466664 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49466127 49466559 49466127 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49465820 49466029 49465820 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49465560 49465670 49465560 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49464679 49465097 49464679 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49464392 49464500 49464392 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49464232 49464312 49464232 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49463981 49464153 49463981 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49462532 49462657 49462532 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49462056 49462217 49462056 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49461914 49461971 49461914 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49461046 49461276 49461046 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49460729 49460875 49460729 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49459759 49460304 49459759 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49459390 49459647 49459390 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49459179 49459286 49459179 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49458956 49459050 49458956 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49458700 49458856 49458700 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49458284 49458478 49458284 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49457968 49458126 49457968 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 CDS 49456836 49457099 49456836 ID=Msa1159770-mRNA-1:cds;Parent=Msa1159770-mRNA-1
chr7_4 three_prime_UTR 49456770 49456835 49456770 ID=Msa1159770-mRNA-1:three_prime_utr;Parent=Msa1159770-mRNA-1
chr7_4 three_prime_UTR 49456454 49456749 49456454 ID=Msa1159770-mRNA-1:three_prime_utr;Parent=Msa1159770-mRNA-1
Gene Sequence

>Msa1159770

CGCAACAGAGGATTGCATGATGATGAAACTTTATCTGAATGGATAAATGGTTCCAATGCTCAGAAATCAGGGAACTTCCTTGATACAGATTTCATACCGCAACATCGCACTAATAGGGTTAGGTATGAACCTGCATATGTGGATGTTGGGAATGGCATAGCTTATAAGATTCCTCCAATTTATGATAAGTTGGCACCACTTGTGAACCTTCCAAGCCTCTCAGATATCCACGTTGAGGACTTTTTCCTAAAGGGTACATTGGATTTGGGCTCCTTGGCTGAAATGATGGCATCTGATAAGAAGTTTGGAAATAGAAACCGAGCAGGCATGGGGGAAACTTTATCCCAATATGAATCACTTCAAGCACGTCTAAAGGACACATCTGCTTCTAATTCAACCCACAAGTTCAGTCTGAAATTATCTGAGGCTGATTTGAATTCCTCCATTCCAGAGGGGGCAGCTGGAAGGATAAAGCGGTCTATTTTATCTGAGGGTGGTATATTGCAGGTTTGCTATGTGAAGGTTTTGGAGAAAGGCGATACTTATGAGATCATTGAAAGAAGCTTACCCAAGAAACAAAAGGTAACGAAAGACGCTGCTTTAATAGAGAAAGAGGAAATGGAAAAATTGGGAAAGATTTGGGTAAACATTGTAAGAAGAGATCTACCGAGACATCATCGGAATTTTACTACTTTTCATCGAAAGCAGGTCGTTGATGCCAAGAGGGCCGCAGATATTTGTCAAAGAGAGGCATGCCCTGTTAAAATGAAAGTTAGTAGATCGCTTAAATGGACGAGAACTGCTAGCATGCGCACCCGAAAACTAGCTAGAGACATGCTACTATTCTGGAAACGAATAGATAAGGAGATGTTAGAAATTAGGAAAAGGGAGGAAAAAGAAGCTGCTGAAGCTTTGAGGCGTGAGCAAGAGCTTCGAGAAGCAAAAAGGCAGCAGCAAAGACTAAATTTTCTTATACAGCAGACTGAGCTGTACAGCCACTTTATGCAAAACAAGTCAATAGCTTCAGAAGCTCTACCCATGGCAGACGAAAATATAAATGATGAAAATGCGCTGATCAACTCTTCAGCTGCTGGTCTTAACGAGGAGGAAGATCCTGAAGAGGCTGAATTAAAGAAGGAAGCTTTGAAGGCTGCTCAAGAAGCAGTTTCTAAGCAGAAAATGTTGACAAGTGCTTTTGACACTGAATGCTTGAAGCTGCGCCAGGCTGGTGAATCTGATTCACTTCAACCAGAAGTTTCTGGAGCAAGCAATATTGACTTGAAGACCCCCTCCACCATGCCTGTGGCATCCACAGTTCGGACACCTGAATTATTCAATGGCTGTCTCAAAGATTATCAGCTAAAAGGTCTTCAGTGGCTAGTTAATTGTTATGAGCAGGGTTTAAATGGTATTCTTGCTGATGAGATGGGACTTGGAAAGACCATTCAGGCTATGGTTTTTTTAGCCCATTTAGCTGAGGAGAAAAACATATGGGGACCTTTTTTGATTGTTGCACCCGCTTCTGTATTAAATAATTGGAATGAGGAGCTCGAGCGCTTCTGCCCTGAACTTAAAGTACTTCCTTATTGGGGTGGGCTTTCAGAGCGGACAGTGCTCAGGAAAAGTATGAACCCAAAGGATCTTTATCGCAGGGAAGCTAAATTTCACATTCTCATCACAAGCTACCAGCTGTTGGTCTCTGATGAGAAGTATTTCCGGCGCGTGAAATGGCAGTATATGGTTTTAGACGAAGCTCAGGCAATTAAAAGTTCCAACAGTATAAGATGGAAGACACTCCTCAGCTTTAACTGTCGGAATCGCCTACTGCTGACTGGTACACCCGTTCAGAATAATATGGCTGAGTTATGGGCTCTTCTTCACTTCATTATGCCAACTTTATTTGACAGCCATGAGCAGTTTAATGAGTGGTTTTCAAAAGGAATTGAGAACCATGCAGAACATGGGGGTACTTTGAATGAGCACCAACTTAATCGATTGCATTCAATTATAAAGCCTTTCATGTTGCGTCGTGTTAAAAAAGATGTAGTTTCTGAGCTGACTAGCAAAACTGAAATTACCGTGCACTGCAAGTTAAGTTCTCGGCAGCAGGCTTTCTATCAAGCAATTAAGAACAAGATATCTCTTGCTGAGTTGTTTGATAGTAATCGGGGACAGCTCAATGAGAAGAAAATCCTGAATTTAATGAACATTGTTATTCAACTAAGGAAGGTTTGCAACCATCCAGAGTTGTTTGAAAGGAGTGAAGGAAGCACGTACCTTTACTTTGGAGAGATTCCAAATTCCCTCCCTCCTCCTCCATTTGGGGAGTTAGAGAATGTATACTATTCTGGTGGGCACAACCCCATCTCATATGAGATACCGAAACTTGTCTATCAAGAAATTATGCGGAGTTCTGAAACTCTCAATTCAGCTGTTGGTCATGGTTTCTGCAGAGGATCTTTTCCGAAGTATTTTAATATTTTTAGACCAGATAATGTTTATCAATCTGTCTTTTCAGAAGATATGCATGTTAAAAGTGGAACCTTTGGGTTTACCCATTTGATGGATTTATCTCCACAAGAGGCGGCATTTCTGGTTAATGGTTCTTTTATGGAGCGACTATTATTTTCTATGATGAGATGGGACCAGAAATTCATTGATGAAGTTGTAGACTTTCTTACGGAGACCACAGATGATGATCTGGAATGTAGTTCCCTTGAAAAAGGAAAAGTGAGAACCGTCACACGAATGTTATTGGTGCCATCAAGATCTGAGACCAAGTTTCTTCAGAACAGATTACCAACTGGACCCAGCCATGCTCCTTTTGAGGCCTTGGTTGTGCCACATCAGGAGAGGCTTTTCTCAAATGCAAGGCTTCTTCACTCAGCTTACTCATATATTCCACCAAGTAGAGCACCCCCAATCGGTGCTCACTGTTCTGATAGGAACTTCTACTATAAAATGATTGAGGAACTGCATGATCCATGGGTTAAGAGGTTGTTTGTGGGATTTGCACGTACGTCTGATTTTAATGGTCCTAGCAAGCCAGCTGGTTCTCATCATTTAATTCAAGAGATCGACTCTGAACAACCTGTTTGTAAGCCTGCGCTTCAGTTAACACACAGTATTTTTGGGTCTTCTCCACCTATGCGAAATTTCGACCCAGCAAAATTGCTCACTGACTCTGGGAAGCTTCAAACACTTGATATATTATTGAAACGCTTACGAGCCGGAAATCATCGTGTTCTGTTGTTTGCTCAGATGACCAAGATGCTGAATATTTTGGAGGACTATATGAACTATAGAAAGTATAAGTATTGTAGACTTGATGGATCAACATCTATTCAGGATCGCAGAGATATGGTCAGAGACTTTCAGCATAGGTCTGATATTTTCGTGTTCTTACTGAGTACAAGAGCCGGTGGATTGGGTATTAACTTGACAGCTGCTGACACAGTCATATTTTATGAGAGTGATTGGAATCCAACATTAGATCTACAGGCGATGGACAGAGCTCATCGTTTGGGTCAGACAAAAGATGTTACCGTTTACCGACTTATATGTAAAGAGACAGTCGAAGAGAAGATTCTTCTAAGAGCTAGTCAGAAAAGTACAGTACAGAACCTTGTCATGACTGGTGGTTCTGTTGGTGGTGATCTTTTAGCTCCTGAGGATGTCGTATCTTTGCTTCTGGATGATGTTCAGTTGCAGCAGAAATTTAAAGATATAGCTCAGGTAAGGGATAAGCAAAAGAAAAAACAACCTATGAAGGGTATATTGGTGAATGAAGATGGTGATGCATCTCTCGAAGATGTATCAAACCCTGTAGCCCTGGGTACAACAGATTCTGATCTTGCAGTCGACCCAGAGGGATCAAAGTCCAGTAATAAAAAGAGAAAATCTGCCTCCGATAAGAAAACTTTGAGGCCAAAAAATTCTCAAAAGACTAGTGAATTTGATGCCACGCCTATGGACAACGAGTTGGATGATACTGATCCAGTGGTTCAGAAACCCAAGAGACCAAAGAGAACAAAGAAGAATGTGAATGAAATGTTTGAAGAGGCTCGTACTGGGACAGCTACCATGGTCCCAGGGCAGACACAATATCAACCTCCACATGATGGAGGTTCCAAAATAGAACCAGGCCAAGGCACCTAA

Protein sequence

>Msa1159770

RNRGLHDDETLSEWINGSNAQKSGNFLDTDFIPQHRTNRVRYEPAYVDVGNGIAYKIPPIYDKLAPLVNLPSLSDIHVEDFFLKGTLDLGSLAEMMASDKKFGNRNRAGMGETLSQYESLQARLKDTSASNSTHKFSLKLSEADLNSSIPEGAAGRIKRSILSEGGILQVCYVKVLEKGDTYEIIERSLPKKQKVTKDAALIEKEEMEKLGKIWVNIVRRDLPRHHRNFTTFHRKQVVDAKRAADICQREACPVKMKVSRSLKWTRTASMRTRKLARDMLLFWKRIDKEMLEIRKREEKEAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSIASEALPMADENINDENALINSSAAGLNEEEDPEEAELKKEALKAAQEAVSKQKMLTSAFDTECLKLRQAGESDSLQPEVSGASNIDLKTPSTMPVASTVRTPELFNGCLKDYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAHLAEEKNIWGPFLIVAPASVLNNWNEELERFCPELKVLPYWGGLSERTVLRKSMNPKDLYRREAKFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPVQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHSIIKPFMLRRVKKDVVSELTSKTEITVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQLNEKKILNLMNIVIQLRKVCNHPELFERSEGSTYLYFGEIPNSLPPPPFGELENVYYSGGHNPISYEIPKLVYQEIMRSSETLNSAVGHGFCRGSFPKYFNIFRPDNVYQSVFSEDMHVKSGTFGFTHLMDLSPQEAAFLVNGSFMERLLFSMMRWDQKFIDEVVDFLTETTDDDLECSSLEKGKVRTVTRMLLVPSRSETKFLQNRLPTGPSHAPFEALVVPHQERLFSNARLLHSAYSYIPPSRAPPIGAHCSDRNFYYKMIEELHDPWVKRLFVGFARTSDFNGPSKPAGSHHLIQEIDSEQPVCKPALQLTHSIFGSSPPMRNFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYCRLDGSTSIQDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILLRASQKSTVQNLVMTGGSVGGDLLAPEDVVSLLLDDVQLQQKFKDIAQVRDKQKKKQPMKGILVNEDGDASLEDVSNPVALGTTDSDLAVDPEGSKSSNKKRKSASDKKTLRPKNSQKTSEFDATPMDNELDDTDPVVQKPKRPKRTKKNVNEMFEEARTGTATMVPGQTQYQPPHDGGSKIEPGQGT*