AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1160890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1160890 MtrunA17_Chr7g0255821 94.542 568 29 1 1 568 1 566 0.0 1114
Msa1160890 MtrunA17_Chr7g0255821 95.604 273 11 1 650 921 550 822 5.82e-178 536
Msa1160890 MtrunA17_Chr1g0168031 32.432 370 215 7 195 530 463 831 5.79e-54 204
Msa1160890 MtrunA17_Chr1g0168031 43.830 235 119 5 665 897 909 1132 4.99e-51 195
Msa1160890 MtrunA17_Chr2g0320751 27.128 564 324 12 53 530 158 720 4.20e-53 201
Msa1160890 MtrunA17_Chr2g0320751 37.419 310 172 8 612 919 726 1015 1.36e-51 196
Msa1160890 MtrunA17_Chr2g0281601 29.385 439 188 8 188 530 536 948 5.11e-48 186
Msa1160890 MtrunA17_Chr2g0281601 28.750 320 145 10 673 919 992 1301 7.19e-34 141
Msa1160890 MtrunA17_Chr4g0024921 35.361 263 145 5 672 919 681 933 3.40e-39 157
Msa1160890 MtrunA17_Chr4g0024921 28.571 196 103 3 370 528 455 650 9.63e-18 88.6
Msa1160890 MtrunA17_Chr4g0024921 31.667 120 78 1 252 367 260 379 2.33e-14 77.8
Msa1160890 MtrunA17_Chr1g0212331 39.053 169 98 1 367 530 524 692 6.03e-32 134
Msa1160890 MtrunA17_Chr1g0212331 33.051 236 124 9 695 919 826 1038 3.90e-27 119
Msa1160890 MtrunA17_Chr4g0066741 28.169 284 169 8 253 530 209 463 4.61e-23 105
Msa1160890 MtrunA17_Chr4g0066741 36.242 149 92 2 744 892 485 630 2.78e-19 94.0
Msa1160890 MtrunA17_Chr4g0017211 28.520 277 162 7 253 508 1471 1732 5.44e-23 106
Msa1160890 MtrunA17_Chr4g0017211 34.815 135 79 3 768 897 1830 1960 1.46e-16 85.1
Msa1160890 MtrunA17_Chr7g0257101 35.859 198 110 6 701 895 1152 1335 1.78e-22 104
Msa1160890 MtrunA17_Chr7g0257101 25.581 301 176 9 253 530 599 874 3.35e-20 97.1
Msa1160890 MtrunA17_Chr2g0286291 27.562 283 172 7 253 530 212 466 1.23e-21 101
Msa1160890 MtrunA17_Chr2g0286291 38.889 126 76 1 767 892 509 633 2.95e-18 90.5
Msa1160890 MtrunA17_Chr8g0384531 40.833 120 69 2 770 889 760 877 2.23e-21 100
Msa1160890 MtrunA17_Chr3g0137091 32.973 185 120 3 732 915 595 776 7.72e-21 99.0
Msa1160890 MtrunA17_Chr3g0137091 23.476 443 252 16 201 598 265 665 2.07e-16 84.7
Msa1160890 MtrunA17_Chr3g0083491 31.140 228 138 8 296 510 729 950 1.53e-20 98.2
Msa1160890 MtrunA17_Chr1g0175191 28.082 292 169 10 252 530 541 804 1.84e-20 97.8
Msa1160890 MtrunA17_Chr1g0175191 30.734 218 128 6 695 895 994 1205 2.24e-20 97.8
Msa1160890 MtrunA17_Chr1g0205891 36.875 160 97 3 740 898 677 833 4.85e-20 96.3
Msa1160890 MtrunA17_Chr1g0205891 25.850 294 174 9 253 530 397 662 1.33e-13 75.5
Msa1160890 MtrunA17_Chr5g0442141 39.474 152 89 2 744 895 929 1077 8.00e-20 95.9
Msa1160890 MtrunA17_Chr5g0442141 25.256 293 172 9 254 530 639 900 6.32e-17 86.3
Msa1160890 MtrunA17_Chr5g0394201 36.774 155 95 2 744 898 668 819 9.09e-20 95.5
Msa1160890 MtrunA17_Chr5g0394201 24.658 292 180 8 253 530 384 649 7.64e-14 76.3
Msa1160890 MtrunA17_Chr3g0095091 38.816 152 90 2 744 895 883 1031 1.08e-19 95.5
Msa1160890 MtrunA17_Chr3g0095091 25.172 290 176 7 254 530 593 854 4.92e-17 86.7
Msa1160890 MtrunA17_Chr5g0428401 30.808 198 109 4 296 465 487 684 1.14e-19 95.5
Msa1160890 MtrunA17_Chr5g0428401 26.619 278 143 9 673 892 1352 1626 1.77e-15 81.6
Msa1160890 MtrunA17_Chr1g0183681 32.895 152 98 2 747 898 734 881 1.26e-17 88.6
Msa1160890 MtrunA17_Chr1g0163011 25.000 268 161 7 252 502 216 460 3.06e-17 86.7
Msa1160890 MtrunA17_Chr1g0163011 32.192 146 95 2 747 892 569 710 2.33e-15 80.9
Msa1160890 MtrunA17_Chr7g0232121 28.000 200 127 3 735 919 352 549 5.15e-17 86.3
Msa1160890 MtrunA17_Chr7g0232121 24.129 373 189 16 199 537 35 347 1.06e-13 75.5
Msa1160890 MtrunA17_Chr5g0403921 38.655 119 72 1 768 886 524 641 5.16e-17 86.3
Msa1160890 MtrunA17_Chr5g0403921 22.356 331 204 10 250 553 198 502 2.13e-16 84.0
Msa1160890 MtrunA17_Chr7g0231521 28.000 200 127 3 735 919 273 470 5.45e-17 86.3
Msa1160890 MtrunA17_Chr7g0231521 26.531 245 102 11 199 421 35 223 3.35e-11 67.4
Msa1160890 MtrunA17_Chr4g0066651 37.500 128 77 2 772 898 1330 1455 9.87e-17 85.9
Msa1160890 MtrunA17_Chr4g0066651 25.839 298 172 9 253 530 1010 1278 1.04e-15 82.4
Msa1160890 MtrunA17_Chr5g0393461 32.768 177 113 3 744 916 534 708 1.36e-16 85.1
Msa1160890 MtrunA17_Chr5g0393461 25.753 299 181 8 252 530 210 487 6.42e-13 73.2
Msa1160890 MtrunA17_Chr7g0233001 40.769 130 71 2 768 892 339 467 4.27e-16 82.4
Msa1160890 MtrunA17_Chr2g0320781 40.984 122 66 2 768 884 111 231 4.33e-16 79.0
Msa1160890 MtrunA17_Chr4g0052341 35.294 153 90 4 770 915 1080 1230 4.94e-16 83.6
Msa1160890 MtrunA17_Chr4g0052341 21.271 362 236 12 254 596 767 1098 2.17e-12 71.6
Msa1160890 MtrunA17_Chr4g0040301 31.818 154 103 1 768 921 398 549 6.26e-16 82.4
Msa1160890 MtrunA17_Chr4g0040301 25.446 224 142 8 260 469 18 230 4.99e-14 76.3
Msa1160890 MtrunA17_Chr1g0190381 36.416 173 86 4 743 898 183 348 1.22e-15 81.3
Msa1160890 MtrunA17_Chr4g0047081 39.231 130 73 2 768 892 1054 1182 1.87e-15 81.6
Msa1160890 MtrunA17_Chr7g0225791 39.231 130 73 2 768 892 1104 1232 3.87e-15 80.5
Msa1160890 MtrunA17_Chr7g0232991 36.434 129 77 2 768 892 479 606 8.30e-14 75.5
Msa1160890 MtrunA17_Chr7g0248031 39.200 125 69 2 753 877 1330 1447 4.62e-13 73.9
Msa1160890 MtrunA17_Chr7g0248031 24.590 305 182 9 253 530 1015 1298 5.07e-13 73.6
Msa1160890 MtrunA17_Chr8g0348721 34.810 158 94 4 744 901 1309 1457 4.85e-13 73.9
Msa1160890 MtrunA17_Chr8g0348721 24.752 303 183 6 253 530 1008 1290 5.28e-13 73.6
Msa1160890 MtrunA17_Chr7g0233021 39.167 120 65 3 768 882 1052 1168 3.24e-12 70.9
Msa1160890 MtrunA17_Chr7g0232971 36.885 122 70 2 768 883 1115 1235 4.82e-12 70.5
Msa1160890 MtrunA17_Chr4g0069451 33.898 118 76 1 768 885 488 603 6.76e-12 69.3
Msa1160890 MtrunA17_Chr7g0233031 38.168 131 72 3 768 892 1064 1191 1.23e-11 68.9
Msa1160890 MtrunA17_Chr2g0296421 33.333 159 97 4 743 896 843 997 1.79e-11 68.6
Msa1160890 MtrunA17_Chr8g0352361 35.252 139 83 3 763 896 712 848 2.56e-11 67.8
Msa1160890 MtrunA17_Chr1g0191141 39.362 94 56 1 790 883 949 1041 3.70e-11 67.4
Msa1160890 MtrunA17_Chr3g0114161 30.822 146 92 4 743 883 1045 1186 4.56e-11 67.0
Msa1160890 MtrunA17_Chr7g0224051 29.940 167 108 4 722 883 893 1055 7.21e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1160890 AT5G05130.1 56.485 586 204 8 1 551 42 611 0.0 645
Msa1160890 AT5G05130.1 59.532 299 110 5 624 915 581 875 1.61e-102 340
Msa1160890 AT5G22750.1 34.884 387 194 7 202 530 347 733 1.13e-55 209
Msa1160890 AT5G22750.1 41.509 265 139 6 657 919 778 1028 1.28e-52 200
Msa1160890 AT5G43530.1 32.895 380 215 10 190 530 604 982 1.57e-53 203
Msa1160890 AT5G43530.1 44.770 239 118 5 658 893 1025 1252 1.41e-51 197
Msa1160890 AT1G11100.5 32.533 375 191 8 193 531 389 737 1.65e-50 194
Msa1160890 AT1G11100.5 33.333 309 141 8 673 919 776 1081 1.12e-40 162
Msa1160890 AT1G11100.1 32.533 375 191 8 193 531 532 880 2.78e-50 193
Msa1160890 AT1G11100.1 33.333 309 141 8 673 919 919 1224 1.22e-40 163
Msa1160890 AT1G61140.3 28.306 431 188 8 195 530 390 794 7.63e-46 179
Msa1160890 AT1G61140.3 31.293 294 152 8 673 919 828 1118 6.11e-37 151
Msa1160890 AT1G61140.2 28.306 431 188 8 195 530 555 959 8.53e-46 179
Msa1160890 AT1G61140.1 28.306 431 188 8 195 530 548 952 1.03e-45 179
Msa1160890 AT1G61140.1 31.293 294 152 8 673 919 986 1276 9.10e-37 150
Msa1160890 AT3G16600.1 29.640 361 175 7 195 530 45 351 3.45e-43 167
Msa1160890 AT3G16600.1 28.244 262 143 6 646 904 372 591 1.78e-27 119
Msa1160890 AT3G12810.1 25.941 717 404 26 252 895 556 1218 8.41e-42 167
Msa1160890 AT3G12810.2 25.941 717 404 26 252 895 552 1214 8.70e-42 167
Msa1160890 AT1G05120.1 33.984 256 159 3 672 919 578 831 6.05e-41 162
Msa1160890 AT1G05120.1 30.769 182 82 5 187 366 124 263 8.41e-17 85.9
Msa1160890 AT1G05120.1 28.061 196 104 3 370 528 354 549 2.25e-16 84.7
Msa1160890 AT1G05120.2 33.984 256 159 3 672 919 621 874 8.18e-41 162
Msa1160890 AT1G05120.2 30.769 182 82 5 187 366 167 306 8.43e-17 85.9
Msa1160890 AT1G05120.2 28.061 196 104 3 370 528 397 592 2.33e-16 84.7
Msa1160890 AT1G11100.4 33.333 309 141 8 673 919 963 1268 1.22e-40 163
Msa1160890 AT1G11100.4 37.572 173 103 1 364 531 752 924 1.99e-29 127
Msa1160890 AT1G11100.2 33.333 309 141 8 673 919 962 1267 1.35e-40 163
Msa1160890 AT1G11100.2 37.572 173 103 1 364 531 751 923 2.13e-29 127
Msa1160890 AT1G11100.3 33.333 309 141 8 673 919 820 1125 1.47e-40 162
Msa1160890 AT1G11100.3 37.572 173 103 1 364 531 609 781 2.35e-29 127
Msa1160890 AT1G02670.4 30.063 316 167 6 252 528 144 444 6.23e-36 144
Msa1160890 AT1G02670.5 30.063 316 167 6 252 528 117 417 1.43e-35 144
Msa1160890 AT1G02670.5 39.231 130 77 1 743 872 487 614 1.10e-21 101
Msa1160890 AT1G02670.6 30.063 316 167 6 252 528 117 417 1.87e-35 144
Msa1160890 AT1G02670.6 41.722 151 86 1 743 893 487 635 5.39e-29 124
Msa1160890 AT1G02670.2 30.063 316 167 6 252 528 144 444 2.19e-35 144
Msa1160890 AT1G02670.2 39.231 130 77 1 743 872 514 641 9.25e-22 101
Msa1160890 AT1G02670.3 30.063 316 167 6 252 528 144 444 2.80e-35 144
Msa1160890 AT1G02670.3 41.722 151 86 1 743 893 514 662 4.45e-29 124
Msa1160890 AT3G20010.1 29.000 300 155 8 673 919 751 1045 2.99e-33 139
Msa1160890 AT3G20010.1 40.116 172 98 1 364 530 536 707 2.88e-29 126
Msa1160890 AT3G20010.5 29.000 300 155 8 673 919 751 1045 2.99e-33 139
Msa1160890 AT3G20010.5 40.116 172 98 1 364 530 536 707 2.88e-29 126
Msa1160890 AT3G20010.7 29.000 300 155 8 673 919 751 1045 2.99e-33 139
Msa1160890 AT3G20010.7 40.116 172 98 1 364 530 536 707 2.88e-29 126
Msa1160890 AT3G20010.2 28.859 298 158 7 673 919 460 754 3.47e-33 138
Msa1160890 AT3G20010.2 40.116 172 98 1 364 530 245 416 9.45e-30 127
Msa1160890 AT3G20010.3 29.000 300 155 8 673 919 485 779 3.57e-33 138
Msa1160890 AT3G20010.3 40.116 172 98 1 364 530 270 441 1.21e-29 127
Msa1160890 AT1G50410.4 40.237 169 96 1 367 530 468 636 8.40e-32 134
Msa1160890 AT1G50410.4 27.652 264 101 9 195 406 218 443 2.22e-15 81.3
Msa1160890 AT1G50410.2 40.237 169 96 1 367 530 468 636 1.15e-31 134
Msa1160890 AT1G50410.2 30.592 304 151 10 673 919 679 979 1.43e-31 133
Msa1160890 AT1G50410.2 27.652 264 101 9 195 406 218 443 3.27e-15 80.9
Msa1160890 AT1G50410.1 40.237 169 96 1 367 530 468 636 1.15e-31 134
Msa1160890 AT1G50410.1 30.592 304 151 10 673 919 679 979 1.43e-31 133
Msa1160890 AT1G50410.1 27.652 264 101 9 195 406 218 443 3.27e-15 80.9
Msa1160890 AT1G50410.3 40.237 169 96 1 367 530 468 636 1.15e-31 134
Msa1160890 AT1G50410.3 30.592 304 151 10 673 919 679 979 1.43e-31 133
Msa1160890 AT1G50410.3 27.652 264 101 9 195 406 218 443 3.27e-15 80.9
Msa1160890 AT3G20010.4 40.116 172 98 1 364 530 536 707 2.30e-29 126
Msa1160890 AT3G20010.6 40.116 172 98 1 364 530 536 707 2.30e-29 126
Msa1160890 AT3G20010.8 40.116 172 98 1 364 530 536 707 2.30e-29 126
Msa1160890 AT1G02670.7 41.830 153 83 2 743 893 491 639 3.21e-29 125
Msa1160890 AT1G02670.7 28.814 295 175 7 252 528 144 421 4.57e-29 124
Msa1160890 AT1G02670.1 41.830 153 83 2 743 893 502 650 3.73e-29 125
Msa1160890 AT1G02670.1 36.612 183 94 4 252 424 155 325 7.22e-29 124
Msa1160890 AT3G54280.2 28.520 277 166 7 253 510 1503 1766 6.63e-25 112
Msa1160890 AT3G54280.2 32.749 171 95 4 743 897 1827 1993 1.55e-17 89.0
Msa1160890 AT3G54280.1 28.520 277 166 7 253 510 1472 1735 6.66e-25 112
Msa1160890 AT3G54280.1 32.749 171 95 4 743 897 1796 1962 1.70e-17 89.0
Msa1160890 AT2G40770.2 29.682 283 150 9 296 531 499 779 2.36e-24 110
Msa1160890 AT2G40770.2 26.820 261 164 6 670 906 1341 1598 2.88e-18 91.3
Msa1160890 AT2G40770.1 29.682 283 150 9 296 531 499 779 2.36e-24 110
Msa1160890 AT2G40770.1 26.820 261 164 6 670 906 1341 1598 2.88e-18 91.3
Msa1160890 AT2G40770.3 29.682 283 150 9 296 531 499 779 2.36e-24 110
Msa1160890 AT2G40770.3 26.820 261 164 6 670 906 1341 1598 2.88e-18 91.3
Msa1160890 AT3G57300.2 36.364 198 109 6 701 895 1199 1382 7.35e-22 102
Msa1160890 AT3G57300.2 21.958 337 178 9 252 530 606 915 1.46e-13 75.9
Msa1160890 AT3G57300.1 36.364 198 109 6 701 895 1166 1349 7.41e-22 102
Msa1160890 AT3G57300.1 23.920 301 181 9 253 530 607 882 2.09e-17 88.2
Msa1160890 AT3G57300.4 36.364 198 109 6 701 895 1166 1349 7.41e-22 102
Msa1160890 AT3G57300.4 23.920 301 181 9 253 530 607 882 2.09e-17 88.2
Msa1160890 AT5G63950.1 41.667 120 68 2 770 889 752 869 1.16e-21 102
Msa1160890 AT5G18620.2 28.873 284 167 9 253 530 215 469 1.17e-21 102
Msa1160890 AT5G18620.2 38.889 126 76 1 767 892 512 636 7.39e-19 92.8
Msa1160890 AT5G18620.1 28.873 284 167 9 253 530 215 469 1.27e-21 101
Msa1160890 AT5G18620.1 38.889 126 76 1 767 892 512 636 7.77e-19 92.8
Msa1160890 AT5G63950.2 41.667 120 68 2 770 889 735 852 1.31e-21 101
Msa1160890 AT2G13370.1 40.000 150 87 2 746 895 937 1083 6.43e-21 99.8
Msa1160890 AT2G13370.1 24.232 293 175 8 254 530 647 908 8.84e-16 83.2
Msa1160890 AT2G13370.2 40.000 150 87 2 746 895 937 1083 6.43e-21 99.8
Msa1160890 AT2G13370.2 24.232 293 175 8 254 530 647 908 8.84e-16 83.2
Msa1160890 AT2G13370.3 40.000 150 87 2 746 895 937 1083 6.43e-21 99.8
Msa1160890 AT2G13370.3 24.232 293 175 8 254 530 647 908 8.84e-16 83.2
Msa1160890 AT3G06400.3 28.169 284 169 8 253 530 210 464 7.08e-21 99.4
Msa1160890 AT3G06400.3 38.889 126 76 1 767 892 507 631 2.34e-18 91.3
Msa1160890 AT3G06400.2 28.169 284 169 8 253 530 210 464 7.25e-21 99.4
Msa1160890 AT3G06400.2 38.889 126 76 1 767 892 507 631 2.55e-18 91.3
Msa1160890 AT3G06400.1 28.169 284 169 8 253 530 210 464 7.44e-21 99.4
Msa1160890 AT3G06400.1 38.889 126 76 1 767 892 507 631 2.55e-18 91.3
Msa1160890 AT3G06010.1 38.994 159 91 4 742 898 706 860 1.71e-20 98.2
Msa1160890 AT3G06010.1 24.079 353 197 10 161 495 361 660 2.07e-14 78.6
Msa1160890 AT5G19310.2 37.736 159 93 4 742 898 424 578 2.39e-19 94.4
Msa1160890 AT5G19310.2 22.164 379 222 12 181 543 100 421 2.54e-13 74.7
Msa1160890 AT5G19310.1 37.736 159 93 4 742 898 688 842 3.38e-19 94.0
Msa1160890 AT5G19310.1 22.427 379 221 13 181 543 364 685 2.74e-13 74.7
Msa1160890 AT1G03750.1 25.952 289 159 9 195 469 132 379 3.97e-19 93.6
Msa1160890 AT1G03750.1 30.168 179 121 2 743 921 523 697 5.57e-16 83.2
Msa1160890 AT2G02090.1 27.667 300 175 10 252 534 234 508 5.87e-19 92.8
Msa1160890 AT2G02090.1 33.557 149 95 2 747 895 587 731 4.71e-16 83.6
Msa1160890 AT4G31900.2 31.176 170 114 2 734 903 469 635 8.33e-19 92.8
Msa1160890 AT4G31900.2 25.627 359 200 13 254 585 206 524 1.19e-17 89.0
Msa1160890 AT4G31900.1 31.176 170 114 2 734 903 510 676 1.18e-18 92.4
Msa1160890 AT4G31900.1 25.627 359 200 13 254 585 247 565 1.14e-17 89.0
Msa1160890 AT4G31900.3 31.176 170 114 2 734 903 510 676 1.23e-18 92.4
Msa1160890 AT4G31900.3 25.627 359 200 13 254 585 247 565 1.19e-17 89.0
Msa1160890 AT2G18760.3 37.209 129 79 1 770 898 806 932 3.34e-18 90.9
Msa1160890 AT2G25170.3 30.769 182 122 3 735 915 608 786 3.61e-18 90.9
Msa1160890 AT2G25170.3 23.985 271 150 7 254 495 321 564 1.95e-13 75.5
Msa1160890 AT2G25170.2 30.769 182 122 3 735 915 599 777 3.79e-18 90.9
Msa1160890 AT2G25170.2 23.985 271 150 7 254 495 312 555 1.97e-13 75.5
Msa1160890 AT2G28290.2 39.844 128 74 2 772 898 1095 1220 3.82e-18 90.9
Msa1160890 AT2G28290.2 25.424 354 190 10 195 530 746 1043 7.86e-17 86.7
Msa1160890 AT2G18760.4 37.209 129 79 1 770 898 747 873 3.98e-18 90.5
Msa1160890 AT2G18760.1 37.209 129 79 1 770 898 747 873 3.98e-18 90.5
Msa1160890 AT2G18760.2 37.209 129 79 1 770 898 747 873 3.98e-18 90.5
Msa1160890 AT2G18760.7 37.209 129 79 1 770 898 747 873 3.98e-18 90.5
Msa1160890 AT2G18760.5 37.209 129 79 1 770 898 747 873 3.98e-18 90.5
Msa1160890 AT2G18760.6 37.209 129 79 1 770 898 747 873 3.98e-18 90.5
Msa1160890 AT2G28290.1 39.844 128 74 2 772 898 1095 1220 4.09e-18 90.9
Msa1160890 AT2G28290.1 25.843 356 186 12 195 530 746 1043 8.79e-17 86.7
Msa1160890 AT2G28290.5 39.844 128 74 2 772 898 1096 1221 4.09e-18 90.9
Msa1160890 AT2G28290.5 25.843 356 186 12 195 530 747 1044 8.79e-17 86.7
Msa1160890 AT2G28290.6 39.844 128 74 2 772 898 1096 1221 4.26e-18 90.9
Msa1160890 AT2G28290.6 25.424 354 190 10 195 530 747 1044 1.01e-16 86.3
Msa1160890 AT2G25170.1 30.769 182 122 3 735 915 582 760 4.32e-18 90.5
Msa1160890 AT2G25170.1 23.985 271 150 7 254 495 295 538 2.15e-13 75.1
Msa1160890 AT2G25170.4 30.769 182 122 3 735 915 582 760 4.32e-18 90.5
Msa1160890 AT2G25170.4 23.985 271 150 7 254 495 295 538 2.15e-13 75.1
Msa1160890 AT2G28290.3 39.844 128 74 2 772 898 1095 1220 4.37e-18 90.9
Msa1160890 AT2G28290.3 25.424 354 190 10 195 530 746 1043 1.02e-16 86.3
Msa1160890 AT2G28290.4 39.844 128 74 2 772 898 1095 1220 4.37e-18 90.9
Msa1160890 AT2G28290.4 25.424 354 190 10 195 530 746 1043 1.02e-16 86.3
Msa1160890 AT5G66750.1 40.336 119 70 1 768 886 542 659 9.38e-18 89.0
Msa1160890 AT5G66750.1 23.301 309 182 11 250 530 216 497 7.00e-13 73.2
Msa1160890 AT2G44980.1 31.551 187 123 3 735 919 355 538 1.33e-17 88.6
Msa1160890 AT2G44980.1 25.914 301 176 12 257 537 77 350 2.76e-16 84.3
Msa1160890 AT2G44980.2 32.143 196 120 4 735 919 364 557 1.51e-17 88.6
Msa1160890 AT2G44980.2 25.806 310 174 13 257 537 77 359 1.79e-15 81.6
Msa1160890 AT2G44980.3 32.143 196 120 4 735 919 363 556 1.67e-17 88.2
Msa1160890 AT2G44980.3 25.559 313 177 13 254 537 73 358 7.28e-16 83.2
Msa1160890 AT3G57300.3 23.920 301 181 9 253 530 607 882 1.87e-17 88.6
Msa1160890 AT3G54460.2 26.786 224 153 6 296 510 456 677 8.76e-17 86.3
Msa1160890 AT3G54460.2 29.268 123 84 2 768 890 898 1017 4.38e-12 70.9
Msa1160890 AT3G54460.1 26.786 224 153 6 296 510 753 974 9.71e-17 86.3
Msa1160890 AT3G54460.1 29.268 123 84 2 768 890 1195 1314 4.27e-12 70.9
Msa1160890 AT3G19210.3 31.638 177 115 3 744 916 530 704 2.75e-16 84.3
Msa1160890 AT3G19210.2 31.638 177 115 3 744 916 528 702 3.45e-16 84.0
Msa1160890 AT3G19210.1 31.638 177 115 3 744 916 530 704 3.73e-16 84.0
Msa1160890 AT5G44800.1 35.948 153 89 4 770 915 1024 1174 7.81e-16 83.6
Msa1160890 AT5G44800.1 21.596 426 246 16 195 596 681 1042 1.97e-11 68.9
Msa1160890 AT1G08600.1 34.756 164 93 2 747 898 1093 1254 1.75e-14 79.0
Msa1160890 AT1G08600.4 34.756 164 93 2 747 898 1114 1275 1.98e-14 78.6
Msa1160890 AT1G08600.3 34.756 164 93 2 747 898 1114 1275 1.98e-14 78.6
Msa1160890 AT1G08600.2 34.756 164 93 2 747 898 1114 1275 1.98e-14 78.6
Msa1160890 AT2G46020.2 36.145 166 99 4 744 909 1304 1462 6.73e-14 77.0
Msa1160890 AT2G46020.3 36.145 166 99 4 744 909 1304 1462 6.73e-14 77.0
Msa1160890 AT2G46020.4 36.145 166 99 4 744 909 1304 1462 6.73e-14 77.0
Msa1160890 AT2G46020.5 36.145 166 99 4 744 909 1303 1461 7.26e-14 77.0
Msa1160890 AT2G46020.5 23.954 263 160 8 253 496 1002 1243 9.56e-11 66.6
Msa1160890 AT2G46020.1 36.145 166 99 4 744 909 1303 1461 7.26e-14 77.0
Msa1160890 AT2G46020.1 23.954 263 160 8 253 496 1002 1243 9.56e-11 66.6
Msa1160890 AT2G46020.6 36.145 166 99 4 744 909 1303 1461 7.26e-14 77.0
Msa1160890 AT2G46020.6 23.954 263 160 8 253 496 1002 1243 9.56e-11 66.6
Msa1160890 AT1G05490.1 38.060 134 77 2 768 896 1217 1349 9.56e-14 76.3
Msa1160890 AT3G24340.1 36.567 134 79 2 768 896 945 1077 1.23e-13 75.9
Msa1160890 AT1G48310.3 38.136 118 71 1 768 885 486 601 2.40e-13 74.7
Msa1160890 AT1G48310.2 38.136 118 71 1 768 885 491 606 2.86e-13 74.3
Msa1160890 AT1G48310.1 38.136 118 71 1 768 885 486 601 2.97e-13 74.3
Msa1160890 AT5G20420.1 38.947 95 55 2 790 883 1107 1199 3.92e-11 67.8
Msa1160890 AT3G42670.4 37.234 94 58 1 790 883 1103 1195 6.04e-11 67.4
Msa1160890 AT3G42670.2 37.234 94 58 1 790 883 1101 1193 6.09e-11 67.4
Msa1160890 AT3G42670.3 37.234 94 58 1 790 883 1101 1193 6.09e-11 67.4
Msa1160890 AT3G42670.1 37.234 94 58 1 790 883 1101 1193 6.09e-11 67.4

Find 240 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTTCATTTCACCTTTC+AGG 0.049354 7_4:+50985916 Msa1160890:five_prime_UTR
GAAATCCGGTGACTCTAATT+TGG 0.198436 7_4:-50991237 None:intergenic
ATTAATGTTTGCAGCAATTC+AGG 0.201076 7_4:-50990303 None:intergenic
AATTGCTGCAAACATTAATT+AGG 0.224811 7_4:+50990307 Msa1160890:CDS
CTTTATCAAAGTAGCGATTT+TGG 0.258385 7_4:-50990583 None:intergenic
TTCTTAATGTTTAAAGTCAT+TGG 0.259053 7_4:+50991257 Msa1160890:three_prime_UTR
TCATCAGTCTTGAAAGATTC+AGG 0.261462 7_4:-50990513 None:intergenic
CACAAATCACAATTCTTAAA+AGG 0.261656 7_4:+50988461 Msa1160890:CDS
TTTGCGGACGGGATGGGATT+AGG 0.262324 7_4:+50986720 Msa1160890:CDS
CTGATGATTTACCGCCGTTT+TGG 0.262594 7_4:+50986616 Msa1160890:CDS
CCCCACCAATGCAGTGTCTT+TGG 0.276924 7_4:-50987558 None:intergenic
GGATACTCCTGTGAAGAAAT+TGG 0.280994 7_4:+50987040 Msa1160890:CDS
TTGGAGTCGTATGGGTTTAA+AGG 0.302377 7_4:-50986096 None:intergenic
TTGCAGCAATTCAGGGTTCT+TGG 0.303442 7_4:-50990295 None:intergenic
TGAATTAGCTCGTGGGTTAA+AGG 0.321866 7_4:+50989537 Msa1160890:CDS
CAATACAGTCATTGCTGCTT+TGG 0.325224 7_4:+50988408 Msa1160890:intron
TGACAAGTCTCAACAATCTT+AGG 0.342045 7_4:-50987587 None:intergenic
TGCCTCCAGAGTGTACTTAA+TGG 0.342639 7_4:+50990854 Msa1160890:CDS
TTGAAGGTATATATGTATTA+TGG 0.345965 7_4:+50986927 Msa1160890:CDS
TTGCGGACGGGATGGGATTA+GGG 0.354547 7_4:+50986721 Msa1160890:CDS
TTGGTAGACGACCTTACTTC+TGG 0.355459 7_4:-50990564 None:intergenic
TGTGAGTCTTCCATGGTGAT+TGG 0.363361 7_4:-50985949 None:intergenic
GATACTCCTGTGAAGAAATT+GGG 0.364943 7_4:+50987041 Msa1160890:CDS
CGAGTTTGAAAATTTGATCT+AGG 0.366948 7_4:-50986467 None:intergenic
CGGTTCAGAAACTAGGGTTT+TGG 0.367071 7_4:-50986508 None:intergenic
GATAAAATGAAAATGAAAAG+TGG 0.372811 7_4:+50986777 Msa1160890:CDS
TGCGCGGCCGGAGCCTCTCT+GGG 0.374792 7_4:+50986689 Msa1160890:CDS
ATAATTGCAAGCCGAGGATC+TGG 0.376493 7_4:+50991020 Msa1160890:CDS
GGCGAGGTATGTTTCGGATT+GGG 0.386366 7_4:-50985989 None:intergenic
TTCAACATGGATAACTCAAT+TGG 0.388574 7_4:+50986881 Msa1160890:CDS
GGGGTGGAGGAGGATTGTTT+TGG 0.395962 7_4:+50987061 Msa1160890:CDS
GGTATGTTTCGGATTGGGAT+TGG 0.396833 7_4:-50985984 None:intergenic
TGTTAATGCGGGACAGAGTC+AGG 0.398787 7_4:+50987106 Msa1160890:CDS
AAGAGGAGATGGGCTGTTAC+GGG 0.409943 7_4:+50987149 Msa1160890:CDS
GGTTTAACGGTTCAGAAACT+AGG 0.413284 7_4:-50986515 None:intergenic
AATAACCTGAGCCCTTTGTT+TGG 0.413400 7_4:-50990745 None:intergenic
GTCGGCGCGTGTTTCTTTAA+CGG 0.413934 7_4:-50986397 None:intergenic
GGGAGCTGAGTTGCGGTGTT+CGG 0.416851 7_4:+50987019 Msa1160890:CDS
ATTCCAGTTGTCCACTTTGT+CGG 0.417033 7_4:+50990454 Msa1160890:CDS
GTGAGTCTTCCATGGTGATT+GGG 0.417921 7_4:-50985948 None:intergenic
ATGTAATTACAATATCTGTT+GGG 0.418594 7_4:-50990377 None:intergenic
GACTGGGATGAGTCGATTGC+AGG 0.422550 7_4:+50987295 Msa1160890:CDS
GTATGTTTCGGATTGGGATT+GGG 0.424542 7_4:-50985983 None:intergenic
ATCCCTCCCCAGAGAGGCTC+CGG 0.425673 7_4:-50986696 None:intergenic
TATATATGTATTATGGTGAT+AGG 0.425987 7_4:+50986934 Msa1160890:CDS
TTGGTTACTGTGAGGATTAG+TGG 0.426857 7_4:+50991109 Msa1160890:three_prime_UTR
GATTGCACAAGCACAACTCT+TGG 0.432366 7_4:+50989471 Msa1160890:CDS
TACTTTGATAAAGCTTCTTA+CGG 0.433519 7_4:+50990593 Msa1160890:CDS
TCATAAGAACCATTCTGAAT+AGG 0.433793 7_4:-50987176 None:intergenic
GAAGAACCTTTAAAAGCAGC+TGG 0.435178 7_4:+50990687 Msa1160890:CDS
ATGCTAGAAGGAGGGTTTAA+CGG 0.438865 7_4:-50986528 None:intergenic
GAAACCGGCGAGGTATGTTT+CGG 0.440133 7_4:-50985995 None:intergenic
ATCAATCGAAGTCAGACAAT+TGG 0.441452 7_4:+50991280 Msa1160890:three_prime_UTR
TTCGGATTGGGATTGGGAGA+AGG 0.442311 7_4:-50985977 None:intergenic
TCGAAAGGTCTGAAGGTTCA+TGG 0.443468 7_4:-50989507 None:intergenic
TTAAAACATTGCGTCTTGAC+GGG 0.446540 7_4:+50990712 Msa1160890:CDS
TTAACGTTGCTATCGTTGAT+TGG 0.448424 7_4:+50986750 Msa1160890:CDS
GCGCCGACAAAGTGGACAAC+TGG 0.449021 7_4:-50990457 None:intergenic
TAAAGCTTCTTACGGAATCA+AGG 0.449329 7_4:+50990601 Msa1160890:CDS
GAAGAGGAGATGGGCTGTTA+CGG 0.450082 7_4:+50987148 Msa1160890:CDS
TTGATGGCGTTGGAGTCGTA+TGG 0.450151 7_4:-50986105 None:intergenic
AGACTTGCAAGCAGAATCAT+TGG 0.451486 7_4:-50990798 None:intergenic
CTTTGAATGCGAAGAGGAGA+TGG 0.451636 7_4:+50987138 Msa1160890:CDS
TTGTTAGAGCGAGTGTTTGT+GGG 0.451832 7_4:-50986234 None:intergenic
TCTGATTTAATAATGCTAGA+AGG 0.452942 7_4:-50986540 None:intergenic
CGGCCGGAGCCTCTCTGGGG+AGG 0.453312 7_4:+50986693 Msa1160890:CDS
ACGGTCGATAAATACCAAAA+AGG 0.453700 7_4:-50991330 None:intergenic
TGTAAAGGTTTCTGAATCCT+TGG 0.454941 7_4:+50989432 Msa1160890:CDS
CAATAACTCTTAATAGAAAA+CGG 0.456175 7_4:-50987233 None:intergenic
GATGTTGGCCATTACGAAAC+CGG 0.457398 7_4:-50986010 None:intergenic
CTTAATCAAGGAAAACAGAC+TGG 0.457415 7_4:+50987278 Msa1160890:CDS
CGGCGAGGTATGTTTCGGAT+TGG 0.457524 7_4:-50985990 None:intergenic
TTGAGTGTTGAGGACTTTGA+TGG 0.457936 7_4:-50986121 None:intergenic
ACTTTAAACATTAAGAAATC+CGG 0.460287 7_4:-50991251 None:intergenic
GGGATATTTGCGGACGGGAT+GGG 0.460336 7_4:+50986714 Msa1160890:CDS
AATCACAATTCTTAAAAGGT+TGG 0.462715 7_4:+50988465 Msa1160890:CDS
AGGAGCGAGAGTGGCGGCGA+CGG 0.463686 7_4:-50986172 None:intergenic
TTGATCTTCTCCCAGATCCT+CGG 0.464060 7_4:-50991031 None:intergenic
TGGTTACTGTGAGGATTAGT+GGG 0.467143 7_4:+50991110 Msa1160890:three_prime_UTR
TCGGATTGGGATTGGGAGAA+GGG 0.469539 7_4:-50985976 None:intergenic
CTCCACCCCAATTTCTTCAC+AGG 0.470263 7_4:-50987047 None:intergenic
TTTAAAACATTGCGTCTTGA+CGG 0.470638 7_4:+50990711 Msa1160890:CDS
TTTGGTGATATTTGAATTGG+TGG 0.470793 7_4:-50985870 None:intergenic
ACTACGATAGGGCGATGCTT+TGG 0.471537 7_4:+50989402 Msa1160890:intron
ATTGCTTGTTCTTCAACGGC+AGG 0.474516 7_4:-50990891 None:intergenic
CACTACTCCGGCACCATCAC+CGG 0.474897 7_4:+50986045 Msa1160890:CDS
TAGGGGTAGTGTAGAGAGGG+TGG 0.476445 7_4:+50986812 Msa1160890:CDS
GAGGATTTCGCGGCCGGTGA+TGG 0.480465 7_4:-50986058 None:intergenic
TAGAATCATACTTAGTATAG+TGG 0.481589 7_4:-50987717 None:intergenic
TAAGCCGAGGATTTCGCGGC+CGG 0.485440 7_4:-50986064 None:intergenic
CCCTCTTTCTCCTCCCAAAA+CGG 0.487569 7_4:-50986630 None:intergenic
ATTGCACAAGCACAACTCTT+GGG 0.487970 7_4:+50989472 Msa1160890:CDS
GTTCAGCGACCTCTTAATCA+AGG 0.488325 7_4:+50987266 Msa1160890:CDS
ACGATAGGGCGATGCTTTGG+AGG 0.488519 7_4:+50989405 Msa1160890:intron
TTCGCGGCCGGTGATGGTGC+CGG 0.488545 7_4:-50986052 None:intergenic
CTAACAACAGCAGCATCTTA+CGG 0.489301 7_4:-50990665 None:intergenic
CTCAAGATGCTGAGGAGTTG+AGG 0.490043 7_4:+50986961 Msa1160890:CDS
TAAGAGTTATTGGCAAAGCT+TGG 0.490157 7_4:+50987244 Msa1160890:CDS
CATGTAATTACAATATCTGT+TGG 0.491515 7_4:-50990378 None:intergenic
AGTCTCAGAGCTTCGAGTAC+AGG 0.493512 7_4:+50990816 Msa1160890:CDS
TTGACTACTTATGCTACATT+GGG 0.494687 7_4:+50986999 Msa1160890:CDS
TGCTTTGGAGGAATATGTAA+AGG 0.496564 7_4:+50989417 Msa1160890:CDS
ATACCTCGCCGGTTTCGTAA+TGG 0.496841 7_4:+50986002 Msa1160890:CDS
AGGGATATTTGCGGACGGGA+TGG 0.502387 7_4:+50986713 Msa1160890:CDS
TACTAACCGTGGCACGTTGA+AGG 0.503311 7_4:+50986911 Msa1160890:CDS
CTTGGAGCGTTTGAGTGTTG+AGG 0.504181 7_4:-50986131 None:intergenic
GTTGAGGACTTTGATGGCGT+TGG 0.504215 7_4:-50986115 None:intergenic
TTAATGTTTGCAGCAATTCA+GGG 0.504494 7_4:-50990302 None:intergenic
AAAGGTGAAATGAAATGAAA+TGG 0.505952 7_4:-50985912 None:intergenic
ATGGATCGTGTCCACCGCAT+TGG 0.507107 7_4:+50990912 Msa1160890:CDS
TATTGAACAATTTCAACTCT+CGG 0.507327 7_4:+50990764 Msa1160890:CDS
GACAATGAATGCCAAACAAA+GGG 0.509108 7_4:+50990734 Msa1160890:CDS
ACTGTATGATGAGGTTAAAG+AGG 0.511501 7_4:+50987637 Msa1160890:CDS
GTTGACTACTTATGCTACAT+TGG 0.511870 7_4:+50986998 Msa1160890:CDS
TATAACCAAATTAGAGTCAC+CGG 0.514303 7_4:+50991232 Msa1160890:three_prime_UTR
AACCAAAGACACTGCATTGG+TGG 0.514527 7_4:+50987556 Msa1160890:CDS
GGATTAAGCCGAGGATTTCG+CGG 0.515048 7_4:-50986068 None:intergenic
AGTGGGAAGAAAAGAGGTAG+GGG 0.516027 7_4:+50986795 Msa1160890:CDS
ACAATTCTTAAAAGGTTGGA+TGG 0.517622 7_4:+50988469 Msa1160890:CDS
TCTGGTGTGCACGGCTCAGT+AGG 0.518306 7_4:-50990546 None:intergenic
AAGTGGGAAGAAAAGAGGTA+GGG 0.519183 7_4:+50986794 Msa1160890:CDS
TGATGGCGTTGGAGTCGTAT+GGG 0.521093 7_4:-50986104 None:intergenic
TGAAGAAATTGGGGTGGAGG+AGG 0.522236 7_4:+50987051 Msa1160890:CDS
TCTATTCTCCTAAAACAAAA+CGG 0.522601 7_4:-50991085 None:intergenic
ATAAAATGAAAATGAAAAGT+GGG 0.525475 7_4:+50986778 Msa1160890:CDS
ATGAAAAGTGGGAAGAAAAG+AGG 0.526742 7_4:+50986789 Msa1160890:CDS
TATGAATCTGACAAGGGATA+CGG 0.528146 7_4:-50986266 None:intergenic
ATCACCGGCCGCGAAATCCT+CGG 0.528188 7_4:+50986060 Msa1160890:CDS
CTGTGAAGAAATTGGGGTGG+AGG 0.528357 7_4:+50987048 Msa1160890:CDS
AGCCGTGCACACCAGAAGTA+AGG 0.529401 7_4:+50990553 Msa1160890:CDS
TGTAATTACAATATCTGTTG+GGG 0.529594 7_4:-50990376 None:intergenic
GCGTGTTTCTTTAACGGCGG+CGG 0.529686 7_4:-50986391 None:intergenic
ATCAAAGGATATCGCTGGCA+TGG 0.529770 7_4:+50991049 Msa1160890:CDS
TTCGTAATGGCCAACATCGT+CGG 0.530765 7_4:+50986015 Msa1160890:CDS
ATCCATTGCTTGTTCTTCAA+CGG 0.535288 7_4:-50990895 None:intergenic
AAATGAAATGAAATGGTAAA+GGG 0.535651 7_4:-50985905 None:intergenic
TTATCAAACTAATGCGCGGC+CGG 0.540005 7_4:+50986677 Msa1160890:CDS
CTCCTTCTGTGATTTCAACA+TGG 0.543913 7_4:+50986868 Msa1160890:CDS
ACTATAATTGAATTAGCTCG+TGG 0.544754 7_4:+50989529 Msa1160890:CDS
GTCGAGGAGAGGAGCGAGAG+TGG 0.545059 7_4:-50986181 None:intergenic
AGGTAGGGGTAGTGTAGAGA+GGG 0.545313 7_4:+50986809 Msa1160890:CDS
AAAGGTTTCTGAATCCTTGG+TGG 0.545721 7_4:+50989435 Msa1160890:CDS
ATACGAAATGAAATGAACAT+TGG 0.545733 7_4:-50986340 None:intergenic
GTGTTTAATGCCGACGATGT+TGG 0.546373 7_4:-50986025 None:intergenic
GAGGTAGGGGTAGTGTAGAG+AGG 0.546579 7_4:+50986808 Msa1160890:CDS
CTTCTTTCTGTCCAATGCGG+TGG 0.546584 7_4:-50990923 None:intergenic
AAAGTGGGAAGAAAAGAGGT+AGG 0.547195 7_4:+50986793 Msa1160890:CDS
AACATGGATAACTCAATTGG+AGG 0.547477 7_4:+50986884 Msa1160890:CDS
CATCAGTCTTGAAAGATTCA+GGG 0.547708 7_4:-50990512 None:intergenic
GAATGCCAAACAAAGGGCTC+AGG 0.547980 7_4:+50990740 Msa1160890:CDS
GTTTAACGGTTCAGAAACTA+GGG 0.551674 7_4:-50986514 None:intergenic
GAAATGAAATGAAATGGTAA+AGG 0.552461 7_4:-50985906 None:intergenic
TCAAAGGATATCGCTGGCAT+GGG 0.553941 7_4:+50991050 Msa1160890:CDS
ATTGTTAGAGCGAGTGTTTG+TGG 0.553955 7_4:-50986235 None:intergenic
CGTATGGGTTTAAAGGTTCG+CGG 0.555958 7_4:-50986089 None:intergenic
TGCCGTTGAAGAACAAGCAA+TGG 0.556188 7_4:+50990893 Msa1160890:CDS
ACCAAAGACACTGCATTGGT+GGG 0.558464 7_4:+50987557 Msa1160890:CDS
GGGTTCTTGTGAGTCTTCCA+TGG 0.560574 7_4:-50985956 None:intergenic
AATTTGACGCAAGGATTGAG+AGG 0.560852 7_4:+50989568 Msa1160890:CDS
ACGGGGACGCCTATTCAGAA+TGG 0.563434 7_4:+50987167 Msa1160890:CDS
TATCGCTGGCATGGGCATTG+AGG 0.566281 7_4:+50991058 Msa1160890:CDS
CAAATTTATTTGAGCCACCA+AGG 0.567954 7_4:-50989449 None:intergenic
GGTTACAGAATCAGCGCTGA+AGG 0.569244 7_4:-50986421 None:intergenic
TTGCTTGTTCTTCAACGGCA+GGG 0.573200 7_4:-50990890 None:intergenic
ATCGAAGTCAGACAATTGGA+AGG 0.573568 7_4:+50991284 Msa1160890:three_prime_UTR
AAAGCTTCTTACGGAATCAA+GGG 0.574359 7_4:+50990602 Msa1160890:CDS
ATTTAATAATGCTAGAAGGA+GGG 0.574890 7_4:-50986536 None:intergenic
GATTTAATAATGCTAGAAGG+AGG 0.575245 7_4:-50986537 None:intergenic
GGGGAGGGATATTTGCGGAC+GGG 0.577072 7_4:+50986709 Msa1160890:CDS
ATTATAGTCGAAAGGTCTGA+AGG 0.580180 7_4:-50989514 None:intergenic
AGAATCAGCGCTGAAGGTGT+CGG 0.585621 7_4:-50986415 None:intergenic
GACCTTACTTCTGGTGTGCA+CGG 0.587105 7_4:-50990555 None:intergenic
CTAATTCAATTATAGTCGAA+AGG 0.587141 7_4:-50989522 None:intergenic
GAATGAGAAAGAGTAAAAGA+AGG 0.587449 7_4:-50986369 None:intergenic
AGAAGATCAAAGGATATCGC+TGG 0.588810 7_4:+50991044 Msa1160890:CDS
TAATTGCAAGCCGAGGATCT+GGG 0.591694 7_4:+50991021 Msa1160890:CDS
ACGATCAAGAATGTTAATGC+GGG 0.594066 7_4:+50987095 Msa1160890:CDS
AGCGCTGATTCTGTAACCAC+CGG 0.596740 7_4:+50986426 Msa1160890:CDS
GAGAGGGAGCGCCGACAAAG+TGG 0.597466 7_4:-50990465 None:intergenic
GATGATTTGAATTTGACGCA+AGG 0.599165 7_4:+50989559 Msa1160890:CDS
TGGGGAGGGATATTTGCGGA+CGG 0.601715 7_4:+50986708 Msa1160890:CDS
CTATAATTGAATTAGCTCGT+GGG 0.601786 7_4:+50989530 Msa1160890:CDS
AGGGTGGAGAGTGAGACAAA+TGG 0.602442 7_4:+50986828 Msa1160890:CDS
GGACAATGAATGCCAAACAA+AGG 0.604051 7_4:+50990733 Msa1160890:CDS
ATCCATGTTGAAATCACAGA+AGG 0.607797 7_4:-50986870 None:intergenic
CAAGTCTCAACAATCTTAGG+TGG 0.610314 7_4:-50987584 None:intergenic
ATGATGTGAGCGTCGAGGAG+AGG 0.613070 7_4:-50986192 None:intergenic
TTTACTATTATTATTACCGG+TGG 0.613501 7_4:-50986442 None:intergenic
AGGATCTGGGAGAAGATCAA+AGG 0.613802 7_4:+50991034 Msa1160890:CDS
GCGAGTGTTTGTGGGAACGA+TGG 0.615714 7_4:-50986226 None:intergenic
GAATAACTCAGATTCTGAGA+GGG 0.617790 7_4:-50990481 None:intergenic
TTTGAATGCGAAGAGGAGAT+GGG 0.618382 7_4:+50987139 Msa1160890:CDS
GCGAAGATATGAATCTGACA+AGG 0.618949 7_4:-50986273 None:intergenic
ATATGTATTATGGTGATAGG+AGG 0.619208 7_4:+50986937 Msa1160890:CDS
CTTCTTCTTTCTGTCCAATG+CGG 0.619370 7_4:-50990926 None:intergenic
GAGGAGAGGAGCGAGAGTGG+CGG 0.621145 7_4:-50986178 None:intergenic
AAGAACCAAAGACACTGCAT+TGG 0.621297 7_4:+50987553 Msa1160890:CDS
TATATACCTTCAACGTGCCA+CGG 0.623562 7_4:-50986917 None:intergenic
TCGAAGTCAGACAATTGGAA+GGG 0.626322 7_4:+50991285 Msa1160890:three_prime_UTR
TCTCTGGGGAGGGATATTTG+CGG 0.628312 7_4:+50986704 Msa1160890:CDS
ATCAGTCTTGAAAGATTCAG+GGG 0.628464 7_4:-50990511 None:intergenic
ATACTCCTGTGAAGAAATTG+GGG 0.629443 7_4:+50987042 Msa1160890:CDS
CTCCTGTGAAGAAATTGGGG+TGG 0.632108 7_4:+50987045 Msa1160890:CDS
TTAATCAAGGAAAACAGACT+GGG 0.632433 7_4:+50987279 Msa1160890:CDS
TCAACGGCAGGGTTCCACCA+CGG 0.633364 7_4:-50990879 None:intergenic
CCAAAGACACTGCATTGGTG+GGG 0.634211 7_4:+50987558 Msa1160890:CDS
AAGAAAATAATTGCAAGCCG+AGG 0.634879 7_4:+50991014 Msa1160890:CDS
TTAATTAGGATGCTACAAGA+TGG 0.635154 7_4:+50990321 Msa1160890:CDS
CATGTTGAAATCACAGAAGG+AGG 0.638647 7_4:-50986867 None:intergenic
TACGATCAAGAATGTTAATG+CGG 0.642076 7_4:+50987094 Msa1160890:CDS
TAGGAGGACTCAAGATGCTG+AGG 0.643252 7_4:+50986953 Msa1160890:CDS
CTACATTGGGAGCTGAGTTG+CGG 0.644145 7_4:+50987012 Msa1160890:CDS
TGTACTTAATGGAGCCGTGG+TGG 0.645030 7_4:+50990865 Msa1160890:CDS
AGAGGAGATGGGCTGTTACG+GGG 0.645108 7_4:+50987150 Msa1160890:CDS
GAATAGAGTTGGTTACTGTG+AGG 0.645956 7_4:+50991101 Msa1160890:exon
GGATTGAGAGGAATTAGAGT+GGG 0.649076 7_4:+50989580 Msa1160890:CDS
GAGTGTACTTAATGGAGCCG+TGG 0.649923 7_4:+50990862 Msa1160890:CDS
CAATCCGAAACATACCTCGC+CGG 0.651368 7_4:+50985991 Msa1160890:CDS
GTCGGCATTAAACACTACTC+CGG 0.651569 7_4:+50986033 Msa1160890:CDS
AACACTCAAACGCTCCAAGT+CGG 0.653702 7_4:+50986135 Msa1160890:CDS
CTCCATTAAGTACACTCTGG+AGG 0.653720 7_4:-50990856 None:intergenic
AAGGTTCGCGGATTAAGCCG+AGG 0.655327 7_4:-50986077 None:intergenic
AGAATAACTCAGATTCTGAG+AGG 0.657077 7_4:-50990482 None:intergenic
GCAAATATCCCTCCCCAGAG+AGG 0.658769 7_4:-50986702 None:intergenic
AGACACGACTTGAAATCCAA+AGG 0.665373 7_4:-50987776 None:intergenic
AGAACGTAAACTGTATGATG+AGG 0.665949 7_4:+50987628 Msa1160890:CDS
CGAAGATATGAATCTGACAA+GGG 0.668320 7_4:-50986272 None:intergenic
AGGATTGAGAGGAATTAGAG+TGG 0.668559 7_4:+50989579 Msa1160890:CDS
TGGGAACGATGGCTTCGACG+TGG 0.676867 7_4:-50986215 None:intergenic
TGATTGCTTTGAATGCGAAG+AGG 0.688442 7_4:+50987132 Msa1160890:CDS
TCTTACAATCCCAATCACCA+TGG 0.692216 7_4:+50985939 Msa1160890:exon
CGTGGATGATGTGAGCGTCG+AGG 0.693865 7_4:-50986197 None:intergenic
TTGGAGGAACATACTAACCG+TGG 0.701328 7_4:+50986900 Msa1160890:CDS
GTAATTACAATATCTGTTGG+GGG 0.701393 7_4:-50990375 None:intergenic
TGGCCATTACGAAACCGGCG+AGG 0.702379 7_4:-50986005 None:intergenic
CGAATTATCAAACTAATGCG+CGG 0.709330 7_4:+50986673 Msa1160890:CDS
TTGTGATACATAGATGAGAG+TGG 0.713304 7_4:-50988443 None:intergenic
TCTTTCTCCTCCCAAAACGG+CGG 0.713897 7_4:-50986627 None:intergenic
TCAGTCTTGAAAGATTCAGG+GGG 0.722083 7_4:-50990510 None:intergenic
TTGGGATTGTAAGACCTGAA+AGG 0.740786 7_4:-50985930 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTTTTTAATAAATAATTGT+TGG + chr7_4:50988759-50988778 Msa1160890:intron 10.0%
!!! GTTTTTACTATTATTATTAC+CGG - chr7_4:50986448-50986467 None:intergenic 15.0%
!! ATAAAATGAAAATGAAAAGT+GGG + chr7_4:50986778-50986797 Msa1160890:CDS 15.0%
!!! TAAATTGATATGTTTTTTGT+TGG + chr7_4:50987920-50987939 Msa1160890:intron 15.0%
!! AACATAATGTATTATGAATT+AGG - chr7_4:50988006-50988025 None:intergenic 15.0%
!!! TTATGTAATTAGTCTTTTAT+AGG - chr7_4:50988188-50988207 None:intergenic 15.0%
!!! CCAATAAAATGATATTTTTT+AGG - chr7_4:50988235-50988254 None:intergenic 15.0%
!!! CCTAAAAAATATCATTTTAT+TGG + chr7_4:50988232-50988251 Msa1160890:intron 15.0%
!!! AAATATCATTTTATTGGTTA+CGG + chr7_4:50988238-50988257 Msa1160890:intron 15.0%
!!! TCCTTCTATTTTTTTAATAA+AGG + chr7_4:50988647-50988666 Msa1160890:intron 15.0%
!!! CCTTCTATTTTTTTAATAAA+GGG + chr7_4:50988648-50988667 Msa1160890:intron 15.0%
!! AAATTTCTATATATTTGACT+TGG + chr7_4:50989728-50989747 Msa1160890:intron 15.0%
!!! AATTTCTATATATTTGACTT+GGG + chr7_4:50989729-50989748 Msa1160890:intron 15.0%
!! AAATGAAATGAAATGGTAAA+GGG - chr7_4:50985908-50985927 None:intergenic 20.0%
!! GATAAAATGAAAATGAAAAG+TGG + chr7_4:50986777-50986796 Msa1160890:CDS 20.0%
!!! TTGAAGGTATATATGTATTA+TGG + chr7_4:50986927-50986946 Msa1160890:CDS 20.0%
!! TATATATGTATTATGGTGAT+AGG + chr7_4:50986934-50986953 Msa1160890:CDS 20.0%
!! CAATAACTCTTAATAGAAAA+CGG - chr7_4:50987236-50987255 None:intergenic 20.0%
!! AAACCAAAAAACAGAATAAT+TGG - chr7_4:50987447-50987466 None:intergenic 20.0%
!!! AATTATTCTGTTTTTTGGTT+TGG + chr7_4:50987446-50987465 Msa1160890:intron 20.0%
!! AATTAATCAATGTACCTAAA+TGG - chr7_4:50987886-50987905 None:intergenic 20.0%
!! AACATATCAATTTACTACTT+GGG - chr7_4:50987914-50987933 None:intergenic 20.0%
!! AAACATATCAATTTACTACT+TGG - chr7_4:50987915-50987934 None:intergenic 20.0%
!! TAAGAAACATAGATAATATG+AGG - chr7_4:50988055-50988074 None:intergenic 20.0%
!!! AATTTGTTACTTTCAATTGT+TGG + chr7_4:50988110-50988129 Msa1160890:intron 20.0%
!!! ATTTGTTACTTTCAATTGTT+GGG + chr7_4:50988111-50988130 Msa1160890:intron 20.0%
!!! ACTTTGTTTTTTTCAAATTG+TGG + chr7_4:50988494-50988513 Msa1160890:CDS 20.0%
!! CCCTTTATTAAAAAAATAGA+AGG - chr7_4:50988651-50988670 None:intergenic 20.0%
!!! TAAATAATTGTTGGTTTTCA+AGG + chr7_4:50988768-50988787 Msa1160890:intron 20.0%
!!! ATTCATTTTATGTGTATGTA+TGG + chr7_4:50989028-50989047 Msa1160890:intron 20.0%
!! ATTTATTGTTGACAATACAT+AGG - chr7_4:50990018-50990037 None:intergenic 20.0%
!! ATTGTCAACAATAAATTGAT+TGG + chr7_4:50990022-50990041 Msa1160890:intron 20.0%
!! ATGATATGAATTCTTATGTT+TGG + chr7_4:50990073-50990092 Msa1160890:intron 20.0%
!! ATCAAACTAATTTAGTACAT+TGG - chr7_4:50990113-50990132 None:intergenic 20.0%
!! TCAATAGTAATGAAAATGTA+TGG - chr7_4:50990197-50990216 None:intergenic 20.0%
!! ATGTAATTACAATATCTGTT+GGG - chr7_4:50990380-50990399 None:intergenic 20.0%
!! ACTTTAAACATTAAGAAATC+CGG - chr7_4:50991254-50991273 None:intergenic 20.0%
!!! TTCTTAATGTTTAAAGTCAT+TGG + chr7_4:50991257-50991276 Msa1160890:three_prime_UTR 20.0%
!!! TGTTTTGGTGATATTTGAAT+TGG - chr7_4:50985876-50985895 None:intergenic 25.0%
! GAAATGAAATGAAATGGTAA+AGG - chr7_4:50985909-50985928 None:intergenic 25.0%
! AAAGGTGAAATGAAATGAAA+TGG - chr7_4:50985915-50985934 None:intergenic 25.0%
! ATACGAAATGAAATGAACAT+TGG - chr7_4:50986343-50986362 None:intergenic 25.0%
! TTTACTATTATTATTACCGG+TGG - chr7_4:50986445-50986464 None:intergenic 25.0%
! ATTTAATAATGCTAGAAGGA+GGG - chr7_4:50986539-50986558 None:intergenic 25.0%
! TCTGATTTAATAATGCTAGA+AGG - chr7_4:50986543-50986562 None:intergenic 25.0%
!!! TTATGACTTGTTTTCTCTTA+TGG + chr7_4:50987193-50987212 Msa1160890:CDS 25.0%
!! CGTTTTCTATTAAGAGTTAT+TGG + chr7_4:50987234-50987253 Msa1160890:CDS 25.0%
!!! ATTTTTTACTTGCATGTGTA+GGG + chr7_4:50987347-50987366 Msa1160890:intron 25.0%
! AATTCAATTCATTGAGCAAA+AGG - chr7_4:50987398-50987417 None:intergenic 25.0%
!!! TGACCAATTATTCTGTTTTT+TGG + chr7_4:50987441-50987460 Msa1160890:intron 25.0%
!!! TGGTTTTACTTACTCTTTTT+TGG + chr7_4:50987500-50987519 Msa1160890:intron 25.0%
!! GGTTTTACTTACTCTTTTTT+GGG + chr7_4:50987501-50987520 Msa1160890:intron 25.0%
! TAGAATCATACTTAGTATAG+TGG - chr7_4:50987720-50987739 None:intergenic 25.0%
!! TTTTCTTCAACTGATATTGA+AGG + chr7_4:50987800-50987819 Msa1160890:CDS 25.0%
!! CATTGCTAGTTTCATAAAAA+AGG - chr7_4:50987852-50987871 None:intergenic 25.0%
! ATGATAACATTTAGCCATTT+AGG + chr7_4:50987869-50987888 Msa1160890:intron 25.0%
!!! TTTGTTACTTTCAATTGTTG+GGG + chr7_4:50988112-50988131 Msa1160890:intron 25.0%
! CACAAATCACAATTCTTAAA+AGG + chr7_4:50988461-50988480 Msa1160890:CDS 25.0%
! AATCACAATTCTTAAAAGGT+TGG + chr7_4:50988465-50988484 Msa1160890:CDS 25.0%
!!! TGTTTTTTTCAAATTGTGGA+AGG + chr7_4:50988498-50988517 Msa1160890:CDS 25.0%
! TTAAAGTAGTAACTTTGACT+TGG + chr7_4:50988709-50988728 Msa1160890:intron 25.0%
! AACAGTTTATCAACTGAAAT+CGG - chr7_4:50988872-50988891 None:intergenic 25.0%
! CTAATTCAATTATAGTCGAA+AGG - chr7_4:50989525-50989544 None:intergenic 25.0%
!! ATTCTCAAATTTTCATTTCC+TGG + chr7_4:50989618-50989637 Msa1160890:intron 25.0%
!! TTCTCAAATTTTCATTTCCT+GGG + chr7_4:50989619-50989638 Msa1160890:intron 25.0%
!! AAATACTTTGAGAATGCATA+AGG - chr7_4:50989944-50989963 None:intergenic 25.0%
! AATAGTTTATACACACACTT+GGG - chr7_4:50989984-50990003 None:intergenic 25.0%
! TAATAGTTTATACACACACT+TGG - chr7_4:50989985-50990004 None:intergenic 25.0%
!! TATATCTGTTTGCTACATAA+AGG - chr7_4:50990146-50990165 None:intergenic 25.0%
! AATTGCTGCAAACATTAATT+AGG + chr7_4:50990307-50990326 Msa1160890:CDS 25.0%
! TGTAATTACAATATCTGTTG+GGG - chr7_4:50990379-50990398 None:intergenic 25.0%
! CATGTAATTACAATATCTGT+TGG - chr7_4:50990381-50990400 None:intergenic 25.0%
! TACTTTGATAAAGCTTCTTA+CGG + chr7_4:50990593-50990612 Msa1160890:CDS 25.0%
! TATTGAACAATTTCAACTCT+CGG + chr7_4:50990764-50990783 Msa1160890:CDS 25.0%
! TCTATTCTCCTAAAACAAAA+CGG - chr7_4:50991088-50991107 None:intergenic 25.0%
!!! TATCAATGTTTTTGCCTTTT+TGG + chr7_4:50991316-50991335 Msa1160890:three_prime_UTR 25.0%
! TTTGGTGATATTTGAATTGG+TGG - chr7_4:50985873-50985892 None:intergenic 30.0%
!! AAAGGGTGATGTTTTTGTTT+TGG - chr7_4:50985891-50985910 None:intergenic 30.0%
TTCATTTCATTTCACCTTTC+AGG + chr7_4:50985916-50985935 Msa1160890:five_prime_UTR 30.0%
GAATGAGAAAGAGTAAAAGA+AGG - chr7_4:50986372-50986391 None:intergenic 30.0%
CGAGTTTGAAAATTTGATCT+AGG - chr7_4:50986470-50986489 None:intergenic 30.0%
GATTTAATAATGCTAGAAGG+AGG - chr7_4:50986540-50986559 None:intergenic 30.0%
TTCAACATGGATAACTCAAT+TGG + chr7_4:50986881-50986900 Msa1160890:CDS 30.0%
ATATGTATTATGGTGATAGG+AGG + chr7_4:50986937-50986956 Msa1160890:CDS 30.0%
TTGACTACTTATGCTACATT+GGG + chr7_4:50986999-50987018 Msa1160890:CDS 30.0%
TACGATCAAGAATGTTAATG+CGG + chr7_4:50987094-50987113 Msa1160890:CDS 30.0%
TCATAAGAACCATTCTGAAT+AGG - chr7_4:50987179-50987198 None:intergenic 30.0%
TTAATCAAGGAAAACAGACT+GGG + chr7_4:50987279-50987298 Msa1160890:CDS 30.0%
!!! CATTTTTTACTTGCATGTGT+AGG + chr7_4:50987346-50987365 Msa1160890:intron 30.0%
!!! TTTTTTACTTGCATGTGTAG+GGG + chr7_4:50987348-50987367 Msa1160890:intron 30.0%
TAAGCGCTTGTTTGTTTATA+TGG + chr7_4:50987480-50987499 Msa1160890:intron 30.0%
!!! TTACTTACTCTTTTTTGGGT+AGG + chr7_4:50987505-50987524 Msa1160890:intron 30.0%
TTCATAAAAAAGGTCATTGC+TGG - chr7_4:50987842-50987861 None:intergenic 30.0%
!!! ATGTTTTTTGTTGGAAGCTT+AGG + chr7_4:50987929-50987948 Msa1160890:intron 30.0%
ACATAGATAATATGAGGTGT+TGG - chr7_4:50988049-50988068 None:intergenic 30.0%
CAGAAATGAAATATGTGACA+AGG - chr7_4:50988278-50988297 None:intergenic 30.0%
ACAATTCTTAAAAGGTTGGA+TGG + chr7_4:50988469-50988488 Msa1160890:CDS 30.0%
AGAAGGAAAAAAAACAGCAA+CGG - chr7_4:50988634-50988653 None:intergenic 30.0%
ATGTCCTTAACAACTTAACT+CGG + chr7_4:50988978-50988997 Msa1160890:intron 30.0%
GACATTAATATTAGATGAGC+TGG + chr7_4:50989124-50989143 Msa1160890:intron 30.0%
AAGAACAAGGGTAGAATATT+TGG + chr7_4:50989259-50989278 Msa1160890:intron 30.0%
! AGAATATTTGGTGAAAGAAC+AGG + chr7_4:50989271-50989290 Msa1160890:intron 30.0%
! GAATATTTGGTGAAAGAACA+GGG + chr7_4:50989272-50989291 Msa1160890:intron 30.0%
! AATATTTGGTGAAAGAACAG+GGG + chr7_4:50989273-50989292 Msa1160890:intron 30.0%
! ATTCAATTTGGTGAAAGAAC+AGG + chr7_4:50989302-50989321 Msa1160890:intron 30.0%
! TTCAATTTGGTGAAAGAACA+GGG + chr7_4:50989303-50989322 Msa1160890:intron 30.0%
ACTATAATTGAATTAGCTCG+TGG + chr7_4:50989529-50989548 Msa1160890:CDS 30.0%
CTATAATTGAATTAGCTCGT+GGG + chr7_4:50989530-50989549 Msa1160890:CDS 30.0%
AATCTTAGGAAAAACACTCA+TGG - chr7_4:50989647-50989666 None:intergenic 30.0%
AAAGTAGATTTGGATGTTGT+CGG - chr7_4:50989682-50989701 None:intergenic 30.0%
AAGAAGTAACTCTATGAATG+CGG - chr7_4:50989861-50989880 None:intergenic 30.0%
GTGTGTGTATAAACTATTAG+AGG + chr7_4:50989986-50990005 Msa1160890:intron 30.0%
TATTGTTGACAATACATAGG+AGG - chr7_4:50990015-50990034 None:intergenic 30.0%
! AAATTAGTTTGATGCGAACA+TGG + chr7_4:50990120-50990139 Msa1160890:intron 30.0%
AAAATGTATGGTTCACTGTA+TGG - chr7_4:50990185-50990204 None:intergenic 30.0%
TGCTTAGCAAAAATTATGCA+TGG - chr7_4:50990268-50990287 None:intergenic 30.0%
TTAATGTTTGCAGCAATTCA+GGG - chr7_4:50990305-50990324 None:intergenic 30.0%
ATTAATGTTTGCAGCAATTC+AGG - chr7_4:50990306-50990325 None:intergenic 30.0%
TTAATTAGGATGCTACAAGA+TGG + chr7_4:50990321-50990340 Msa1160890:CDS 30.0%
GTAATTACAATATCTGTTGG+GGG - chr7_4:50990378-50990397 None:intergenic 30.0%
! GAGTTTTCAGAATACATTCT+CGG - chr7_4:50990422-50990441 None:intergenic 30.0%
! CTTTATCAAAGTAGCGATTT+TGG - chr7_4:50990586-50990605 None:intergenic 30.0%
!! AATACAACTGATTTTGTAGC+TGG - chr7_4:50990636-50990655 None:intergenic 30.0%
! TTTAAAACATTGCGTCTTGA+CGG + chr7_4:50990711-50990730 Msa1160890:CDS 30.0%
!!! TTGTTTTAGGAGAATAGAGT+TGG + chr7_4:50991090-50991109 Msa1160890:exon 30.0%
! TAGTGCTGAAAAATATCAGT+TGG + chr7_4:50991199-50991218 Msa1160890:three_prime_UTR 30.0%
TATAACCAAATTAGAGTCAC+CGG + chr7_4:50991232-50991251 Msa1160890:three_prime_UTR 30.0%
TATGAATCTGACAAGGGATA+CGG - chr7_4:50986269-50986288 None:intergenic 35.0%
CGAAGATATGAATCTGACAA+GGG - chr7_4:50986275-50986294 None:intergenic 35.0%
GTTTAACGGTTCAGAAACTA+GGG - chr7_4:50986517-50986536 None:intergenic 35.0%
CGAATTATCAAACTAATGCG+CGG + chr7_4:50986673-50986692 Msa1160890:CDS 35.0%
TTAACGTTGCTATCGTTGAT+TGG + chr7_4:50986750-50986769 Msa1160890:CDS 35.0%
ATGAAAAGTGGGAAGAAAAG+AGG + chr7_4:50986789-50986808 Msa1160890:CDS 35.0%
ATCCATGTTGAAATCACAGA+AGG - chr7_4:50986873-50986892 None:intergenic 35.0%
AACATGGATAACTCAATTGG+AGG + chr7_4:50986884-50986903 Msa1160890:CDS 35.0%
GTTGACTACTTATGCTACAT+TGG + chr7_4:50986998-50987017 Msa1160890:CDS 35.0%
GATACTCCTGTGAAGAAATT+GGG + chr7_4:50987041-50987060 Msa1160890:CDS 35.0%
ATACTCCTGTGAAGAAATTG+GGG + chr7_4:50987042-50987061 Msa1160890:CDS 35.0%
ACGATCAAGAATGTTAATGC+GGG + chr7_4:50987095-50987114 Msa1160890:CDS 35.0%
TAAGAGTTATTGGCAAAGCT+TGG + chr7_4:50987244-50987263 Msa1160890:CDS 35.0%
! GTCTGTTTTCCTTGATTAAG+AGG - chr7_4:50987278-50987297 None:intergenic 35.0%
CTTAATCAAGGAAAACAGAC+TGG + chr7_4:50987278-50987297 Msa1160890:CDS 35.0%
!! TTTTGGGTAGGTTTTGATGT+CGG + chr7_4:50987517-50987536 Msa1160890:intron 35.0%
TGACAAGTCTCAACAATCTT+AGG - chr7_4:50987590-50987609 None:intergenic 35.0%
AGAACGTAAACTGTATGATG+AGG + chr7_4:50987628-50987647 Msa1160890:CDS 35.0%
ACTGTATGATGAGGTTAAAG+AGG + chr7_4:50987637-50987656 Msa1160890:CDS 35.0%
!! TGATTTTTCGATGGTTCCTT+TGG + chr7_4:50987760-50987779 Msa1160890:CDS 35.0%
AAAAGGTCATTGCTGGTAAA+GGG - chr7_4:50987835-50987854 None:intergenic 35.0%
AAAAAGGTCATTGCTGGTAA+AGG - chr7_4:50987836-50987855 None:intergenic 35.0%
ACAAGCAACTGGTAACAAAT+TGG - chr7_4:50988322-50988341 None:intergenic 35.0%
TTGTGATACATAGATGAGAG+TGG - chr7_4:50988446-50988465 None:intergenic 35.0%
! AATTGTGGAAGGTACAAAAG+AGG + chr7_4:50988509-50988528 Msa1160890:intron 35.0%
TGTATTGAAACGCAAGTTTG+TGG + chr7_4:50988594-50988613 Msa1160890:intron 35.0%
GTGCAATATTGCACAAGTTA+AGG - chr7_4:50988815-50988834 None:intergenic 35.0%
AGTTTATCAACTGAAATCGG+AGG - chr7_4:50988869-50988888 None:intergenic 35.0%
CCTAATTGATATTCAACCAG+TGG - chr7_4:50988895-50988914 None:intergenic 35.0%
! CCACTGGTTGAATATCAATT+AGG + chr7_4:50988892-50988911 Msa1160890:intron 35.0%
TGTCCTTAACAACTTAACTC+GGG + chr7_4:50988979-50988998 Msa1160890:intron 35.0%
! AGCTGGCTTAGATAAAACTA+AGG + chr7_4:50989141-50989160 Msa1160890:intron 35.0%
CTACTCAACAAACTTTCTTC+TGG - chr7_4:50989209-50989228 None:intergenic 35.0%
!!! AGTAGTGTGTTACTTTTACC+AGG + chr7_4:50989224-50989243 Msa1160890:intron 35.0%
!!! GTAGTGTGTTACTTTTACCA+GGG + chr7_4:50989225-50989244 Msa1160890:intron 35.0%
!!! TAGTGTGTTACTTTTACCAG+GGG + chr7_4:50989226-50989245 Msa1160890:intron 35.0%
!!! AACAGGGTGGAGATTTTTTA+CGG + chr7_4:50989319-50989338 Msa1160890:intron 35.0%
GTGGCTCTCATAAAAAGATT+TGG + chr7_4:50989341-50989360 Msa1160890:intron 35.0%
AGACTTCGAATACTACGATA+GGG + chr7_4:50989391-50989410 Msa1160890:intron 35.0%
!! TGCTTTGGAGGAATATGTAA+AGG + chr7_4:50989417-50989436 Msa1160890:CDS 35.0%
TGTAAAGGTTTCTGAATCCT+TGG + chr7_4:50989432-50989451 Msa1160890:CDS 35.0%
CAAATTTATTTGAGCCACCA+AGG - chr7_4:50989452-50989471 None:intergenic 35.0%
ATTATAGTCGAAAGGTCTGA+AGG - chr7_4:50989517-50989536 None:intergenic 35.0%
GATGATTTGAATTTGACGCA+AGG + chr7_4:50989559-50989578 Msa1160890:CDS 35.0%
CACTCAAGTCAAAGTAGATT+TGG - chr7_4:50989692-50989711 None:intergenic 35.0%
!! CAAATCTACTTTGACTTGAG+TGG + chr7_4:50989690-50989709 Msa1160890:intron 35.0%
!!! GGTTGTGATGATGTTGTTTT+GGG + chr7_4:50989750-50989769 Msa1160890:intron 35.0%
!!! GTTGTGATGATGTTGTTTTG+GGG + chr7_4:50989751-50989770 Msa1160890:intron 35.0%
!!! TTGTGATGATGTTGTTTTGG+GGG + chr7_4:50989752-50989771 Msa1160890:intron 35.0%
AAAACTTTGACTGACACATG+AGG - chr7_4:50989892-50989911 None:intergenic 35.0%
TTTGAGAATGCATAAGGATG+TGG - chr7_4:50989938-50989957 None:intergenic 35.0%
! GAATAACTCAGATTCTGAGA+GGG - chr7_4:50990484-50990503 None:intergenic 35.0%
AGAATAACTCAGATTCTGAG+AGG - chr7_4:50990485-50990504 None:intergenic 35.0%
ATCAGTCTTGAAAGATTCAG+GGG - chr7_4:50990514-50990533 None:intergenic 35.0%
CATCAGTCTTGAAAGATTCA+GGG - chr7_4:50990515-50990534 None:intergenic 35.0%
TCATCAGTCTTGAAAGATTC+AGG - chr7_4:50990516-50990535 None:intergenic 35.0%
TAAAGCTTCTTACGGAATCA+AGG + chr7_4:50990601-50990620 Msa1160890:CDS 35.0%
AAAGCTTCTTACGGAATCAA+GGG + chr7_4:50990602-50990621 Msa1160890:CDS 35.0%
!!! TTAAAGCCAGCTGCTTTTAA+AGG - chr7_4:50990696-50990715 None:intergenic 35.0%
TTAAAACATTGCGTCTTGAC+GGG + chr7_4:50990712-50990731 Msa1160890:CDS 35.0%
GACAATGAATGCCAAACAAA+GGG + chr7_4:50990734-50990753 Msa1160890:CDS 35.0%
ATCCATTGCTTGTTCTTCAA+CGG - chr7_4:50990898-50990917 None:intergenic 35.0%
AAGAAAATAATTGCAAGCCG+AGG + chr7_4:50991014-50991033 Msa1160890:CDS 35.0%
ATCAATCGAAGTCAGACAAT+TGG + chr7_4:50991280-50991299 Msa1160890:three_prime_UTR 35.0%
TTGGGATTGTAAGACCTGAA+AGG - chr7_4:50985933-50985952 None:intergenic 40.0%
TCTTACAATCCCAATCACCA+TGG + chr7_4:50985939-50985958 Msa1160890:exon 40.0%
! GTATGTTTCGGATTGGGATT+GGG - chr7_4:50985986-50986005 None:intergenic 40.0%
TTGGAGTCGTATGGGTTTAA+AGG - chr7_4:50986099-50986118 None:intergenic 40.0%
!! TTGAGTGTTGAGGACTTTGA+TGG - chr7_4:50986124-50986143 None:intergenic 40.0%
TTGTTAGAGCGAGTGTTTGT+GGG - chr7_4:50986237-50986256 None:intergenic 40.0%
ATTGTTAGAGCGAGTGTTTG+TGG - chr7_4:50986238-50986257 None:intergenic 40.0%
GCGAAGATATGAATCTGACA+AGG - chr7_4:50986276-50986295 None:intergenic 40.0%
! GCTGTTCATGACGCTTTTAA+CGG + chr7_4:50986315-50986334 Msa1160890:CDS 40.0%
!!! AAACTAGGGTTTTGGAAGCT+AGG - chr7_4:50986503-50986522 None:intergenic 40.0%
GGTTTAACGGTTCAGAAACT+AGG - chr7_4:50986518-50986537 None:intergenic 40.0%
ATGCTAGAAGGAGGGTTTAA+CGG - chr7_4:50986531-50986550 None:intergenic 40.0%
!! TGATGATTTACCGCCGTTTT+GGG + chr7_4:50986617-50986636 Msa1160890:CDS 40.0%
AAAGTGGGAAGAAAAGAGGT+AGG + chr7_4:50986793-50986812 Msa1160890:CDS 40.0%
AAGTGGGAAGAAAAGAGGTA+GGG + chr7_4:50986794-50986813 Msa1160890:CDS 40.0%
CATGTTGAAATCACAGAAGG+AGG - chr7_4:50986870-50986889 None:intergenic 40.0%
CTCCTTCTGTGATTTCAACA+TGG + chr7_4:50986868-50986887 Msa1160890:CDS 40.0%
TATATACCTTCAACGTGCCA+CGG - chr7_4:50986920-50986939 None:intergenic 40.0%
GGATACTCCTGTGAAGAAAT+TGG + chr7_4:50987040-50987059 Msa1160890:CDS 40.0%
! TGATTGCTTTGAATGCGAAG+AGG + chr7_4:50987132-50987151 Msa1160890:CDS 40.0%
TTTGAATGCGAAGAGGAGAT+GGG + chr7_4:50987139-50987158 Msa1160890:CDS 40.0%
AAGAACCAAAGACACTGCAT+TGG + chr7_4:50987553-50987572 Msa1160890:CDS 40.0%
CAAGTCTCAACAATCTTAGG+TGG - chr7_4:50987587-50987606 None:intergenic 40.0%
!!! GATCTGTGCTGATTTTTCGA+TGG + chr7_4:50987751-50987770 Msa1160890:CDS 40.0%
AGACACGACTTGAAATCCAA+AGG - chr7_4:50987779-50987798 None:intergenic 40.0%
AAAGGTCATTGCTGGTAAAG+GGG - chr7_4:50987834-50987853 None:intergenic 40.0%
TTCAATTGTTGGGGTGTGAT+TGG + chr7_4:50988121-50988140 Msa1160890:intron 40.0%
CTCTTTGACAACAACTGTGA+TGG - chr7_4:50988347-50988366 None:intergenic 40.0%
CAAAGCAGCAATGACTGTAT+TGG - chr7_4:50988410-50988429 None:intergenic 40.0%
! CAATACAGTCATTGCTGCTT+TGG + chr7_4:50988408-50988427 Msa1160890:intron 40.0%
!! CAGTTGATAAACTGTTCCAC+TGG + chr7_4:50988876-50988895 Msa1160890:intron 40.0%
GCATCAATACCAAAACCTTC+AGG + chr7_4:50988914-50988933 Msa1160890:intron 40.0%
TACCAAAACCTTCAGGTGAT+AGG + chr7_4:50988921-50988940 Msa1160890:intron 40.0%
! TGACCCGAGTTAAGTTGTTA+AGG - chr7_4:50988985-50989004 None:intergenic 40.0%
TTAACAACTTAACTCGGGTC+AGG + chr7_4:50988984-50989003 Msa1160890:intron 40.0%
GTGTATGTATGGAACACAGT+CGG + chr7_4:50989039-50989058 Msa1160890:intron 40.0%
GTGAGGAATTCATCTTAGCA+TGG + chr7_4:50989061-50989080 Msa1160890:intron 40.0%
!! TTACTTTTACCAGGGGAGTT+TGG + chr7_4:50989233-50989252 Msa1160890:intron 40.0%
! GGAGTTTGGTGAAAGAACAA+GGG + chr7_4:50989247-50989266 Msa1160890:intron 40.0%
CAGGGGTAGCATATTCAATT+TGG + chr7_4:50989290-50989309 Msa1160890:intron 40.0%
! AATTTGGTGAAAGAACAGGG+TGG + chr7_4:50989306-50989325 Msa1160890:intron 40.0%
GAGACTTCGAATACTACGAT+AGG + chr7_4:50989390-50989409 Msa1160890:intron 40.0%
AAAGGTTTCTGAATCCTTGG+TGG + chr7_4:50989435-50989454 Msa1160890:CDS 40.0%
ATTGCACAAGCACAACTCTT+GGG + chr7_4:50989472-50989491 Msa1160890:CDS 40.0%
! TGAATTAGCTCGTGGGTTAA+AGG + chr7_4:50989537-50989556 Msa1160890:CDS 40.0%
AATTTGACGCAAGGATTGAG+AGG + chr7_4:50989568-50989587 Msa1160890:CDS 40.0%
AGGATTGAGAGGAATTAGAG+TGG + chr7_4:50989579-50989598 Msa1160890:CDS 40.0%
GGATTGAGAGGAATTAGAGT+GGG + chr7_4:50989580-50989599 Msa1160890:CDS 40.0%
!! GGGTTGTGATGATGTTGTTT+TGG + chr7_4:50989749-50989768 Msa1160890:intron 40.0%
!!! TGTGATGATGTTGTTTTGGG+GGG + chr7_4:50989753-50989772 Msa1160890:intron 40.0%
GTTGGGGGAGATAAACAAAT+TGG - chr7_4:50990363-50990382 None:intergenic 40.0%
ATTCCAGTTGTCCACTTTGT+CGG + chr7_4:50990454-50990473 Msa1160890:CDS 40.0%
TCAGTCTTGAAAGATTCAGG+GGG - chr7_4:50990513-50990532 None:intergenic 40.0%
CTAACAACAGCAGCATCTTA+CGG - chr7_4:50990668-50990687 None:intergenic 40.0%
! GAAGAACCTTTAAAAGCAGC+TGG + chr7_4:50990687-50990706 Msa1160890:CDS 40.0%
GGACAATGAATGCCAAACAA+AGG + chr7_4:50990733-50990752 Msa1160890:CDS 40.0%
AATAACCTGAGCCCTTTGTT+TGG - chr7_4:50990748-50990767 None:intergenic 40.0%
AGACTTGCAAGCAGAATCAT+TGG - chr7_4:50990801-50990820 None:intergenic 40.0%
CTTCTTCTTTCTGTCCAATG+CGG - chr7_4:50990929-50990948 None:intergenic 40.0%
AGAAGATCAAAGGATATCGC+TGG + chr7_4:50991044-50991063 Msa1160890:CDS 40.0%
!!! GAGGATCTCCGTTTTGTTTT+AGG + chr7_4:50991077-50991096 Msa1160890:CDS 40.0%
! GAATAGAGTTGGTTACTGTG+AGG + chr7_4:50991101-50991120 Msa1160890:exon 40.0%
TTGGTTACTGTGAGGATTAG+TGG + chr7_4:50991109-50991128 Msa1160890:three_prime_UTR 40.0%
! TGGTTACTGTGAGGATTAGT+GGG + chr7_4:50991110-50991129 Msa1160890:three_prime_UTR 40.0%
GAAATCCGGTGACTCTAATT+TGG - chr7_4:50991240-50991259 None:intergenic 40.0%
ATCGAAGTCAGACAATTGGA+AGG + chr7_4:50991284-50991303 Msa1160890:three_prime_UTR 40.0%
TCGAAGTCAGACAATTGGAA+GGG + chr7_4:50991285-50991304 Msa1160890:three_prime_UTR 40.0%
GTGAGTCTTCCATGGTGATT+GGG - chr7_4:50985951-50985970 None:intergenic 45.0%
TGTGAGTCTTCCATGGTGAT+TGG - chr7_4:50985952-50985971 None:intergenic 45.0%
! GGTATGTTTCGGATTGGGAT+TGG - chr7_4:50985987-50986006 None:intergenic 45.0%
GATGTTGGCCATTACGAAAC+CGG - chr7_4:50986013-50986032 None:intergenic 45.0%
TTCGTAATGGCCAACATCGT+CGG + chr7_4:50986015-50986034 Msa1160890:CDS 45.0%
GTGTTTAATGCCGACGATGT+TGG - chr7_4:50986028-50986047 None:intergenic 45.0%
GTCGGCATTAAACACTACTC+CGG + chr7_4:50986033-50986052 Msa1160890:CDS 45.0%
CGTATGGGTTTAAAGGTTCG+CGG - chr7_4:50986092-50986111 None:intergenic 45.0%
AACACTCAAACGCTCCAAGT+CGG + chr7_4:50986135-50986154 Msa1160890:CDS 45.0%
! CGGTTCAGAAACTAGGGTTT+TGG - chr7_4:50986511-50986530 None:intergenic 45.0%
!! ACCAAAAAGAAGCGCTAGGA+TGG + chr7_4:50986574-50986593 Msa1160890:CDS 45.0%
! CTGATGATTTACCGCCGTTT+TGG + chr7_4:50986616-50986635 Msa1160890:CDS 45.0%
TTATCAAACTAATGCGCGGC+CGG + chr7_4:50986677-50986696 Msa1160890:CDS 45.0%
AGTGGGAAGAAAAGAGGTAG+GGG + chr7_4:50986795-50986814 Msa1160890:CDS 45.0%
TTGGAGGAACATACTAACCG+TGG + chr7_4:50986900-50986919 Msa1160890:CDS 45.0%
!!! GAGGAGGATTGTTTTGGATG+AGG + chr7_4:50987067-50987086 Msa1160890:CDS 45.0%
CTTTGAATGCGAAGAGGAGA+TGG + chr7_4:50987138-50987157 Msa1160890:CDS 45.0%
GTTCAGCGACCTCTTAATCA+AGG + chr7_4:50987266-50987285 Msa1160890:CDS 45.0%
AACCAAAGACACTGCATTGG+TGG + chr7_4:50987556-50987575 Msa1160890:CDS 45.0%
! ACCAAAGACACTGCATTGGT+GGG + chr7_4:50987557-50987576 Msa1160890:CDS 45.0%
TTTGTTGGAAGCTTAGGACG+AGG + chr7_4:50987935-50987954 Msa1160890:intron 45.0%
! TGTGGAAGGTACAAAAGAGG+AGG + chr7_4:50988512-50988531 Msa1160890:intron 45.0%
! GTGGAAGGTACAAAAGAGGA+GGG + chr7_4:50988513-50988532 Msa1160890:intron 45.0%
! TGCCTATCACCTGAAGGTTT+TGG - chr7_4:50988926-50988945 None:intergenic 45.0%
AAGACATGCCTATCACCTGA+AGG - chr7_4:50988932-50988951 None:intergenic 45.0%
TTCAGGTGATAGGCATGTCT+TGG + chr7_4:50988931-50988950 Msa1160890:intron 45.0%
GCATGTCTTGGCAGATGATT+GGG + chr7_4:50988943-50988962 Msa1160890:intron 45.0%
GAGCTAGAAGTCTCCAAACT+TGG + chr7_4:50989177-50989196 Msa1160890:intron 45.0%
!! CTTCTGGAGTACACCAAGTT+TGG - chr7_4:50989193-50989212 None:intergenic 45.0%
! GGGAGTTTGGTGAAAGAACA+AGG + chr7_4:50989246-50989265 Msa1160890:intron 45.0%
!!! AGGGTGGAGATTTTTTACGG+TGG + chr7_4:50989322-50989341 Msa1160890:intron 45.0%
GATTGCACAAGCACAACTCT+TGG + chr7_4:50989471-50989490 Msa1160890:CDS 45.0%
TCGAAAGGTCTGAAGGTTCA+TGG - chr7_4:50989510-50989529 None:intergenic 45.0%
GAAAAACACTCATGGTTCCC+AGG - chr7_4:50989639-50989658 None:intergenic 45.0%
!! CTTTGACTTGAGTGGTCTTG+TGG + chr7_4:50989698-50989717 Msa1160890:intron 45.0%
TGCTAGCACTATCCCAAAAG+TGG - chr7_4:50989791-50989810 None:intergenic 45.0%
TTGGGATAGTGCTAGCAGAT+TGG + chr7_4:50989794-50989813 Msa1160890:intron 45.0%
TGGGATAGTGCTAGCAGATT+GGG + chr7_4:50989795-50989814 Msa1160890:intron 45.0%
TTGACTGACACATGAGGTGT+TGG - chr7_4:50989886-50989905 None:intergenic 45.0%
GTTTATACACACACTTGGGC+TGG - chr7_4:50989980-50989999 None:intergenic 45.0%
TTGCAGCAATTCAGGGTTCT+TGG - chr7_4:50990298-50990317 None:intergenic 45.0%
TTGGTAGACGACCTTACTTC+TGG - chr7_4:50990567-50990586 None:intergenic 45.0%
TGCCTCCAGAGTGTACTTAA+TGG + chr7_4:50990854-50990873 Msa1160890:CDS 45.0%
CTCCATTAAGTACACTCTGG+AGG - chr7_4:50990859-50990878 None:intergenic 45.0%
TTGCTTGTTCTTCAACGGCA+GGG - chr7_4:50990893-50990912 None:intergenic 45.0%
ATTGCTTGTTCTTCAACGGC+AGG - chr7_4:50990894-50990913 None:intergenic 45.0%
TGCCGTTGAAGAACAAGCAA+TGG + chr7_4:50990893-50990912 Msa1160890:CDS 45.0%
ATAATTGCAAGCCGAGGATC+TGG + chr7_4:50991020-50991039 Msa1160890:CDS 45.0%
TAATTGCAAGCCGAGGATCT+GGG + chr7_4:50991021-50991040 Msa1160890:CDS 45.0%
TTGATCTTCTCCCAGATCCT+CGG - chr7_4:50991034-50991053 None:intergenic 45.0%
AGGATCTGGGAGAAGATCAA+AGG + chr7_4:50991034-50991053 Msa1160890:CDS 45.0%
ATCAAAGGATATCGCTGGCA+TGG + chr7_4:50991049-50991068 Msa1160890:CDS 45.0%
TCAAAGGATATCGCTGGCAT+GGG + chr7_4:50991050-50991069 Msa1160890:CDS 45.0%
GGGTTCTTGTGAGTCTTCCA+TGG - chr7_4:50985959-50985978 None:intergenic 50.0%
! TCGGATTGGGATTGGGAGAA+GGG - chr7_4:50985979-50985998 None:intergenic 50.0%
! TTCGGATTGGGATTGGGAGA+AGG - chr7_4:50985980-50985999 None:intergenic 50.0%
GGCGAGGTATGTTTCGGATT+GGG - chr7_4:50985992-50986011 None:intergenic 50.0%
CAATCCGAAACATACCTCGC+CGG + chr7_4:50985991-50986010 Msa1160890:CDS 50.0%
GAAACCGGCGAGGTATGTTT+CGG - chr7_4:50985998-50986017 None:intergenic 50.0%
!! ATACCTCGCCGGTTTCGTAA+TGG + chr7_4:50986002-50986021 Msa1160890:CDS 50.0%
GGATTAAGCCGAGGATTTCG+CGG - chr7_4:50986071-50986090 None:intergenic 50.0%
! TGATGGCGTTGGAGTCGTAT+GGG - chr7_4:50986107-50986126 None:intergenic 50.0%
!! TTGATGGCGTTGGAGTCGTA+TGG - chr7_4:50986108-50986127 None:intergenic 50.0%
!! GTTGAGGACTTTGATGGCGT+TGG - chr7_4:50986118-50986137 None:intergenic 50.0%
! CTTGGAGCGTTTGAGTGTTG+AGG - chr7_4:50986134-50986153 None:intergenic 50.0%
GTCGGCGCGTGTTTCTTTAA+CGG - chr7_4:50986400-50986419 None:intergenic 50.0%
! AGAATCAGCGCTGAAGGTGT+CGG - chr7_4:50986418-50986437 None:intergenic 50.0%
! GGTTACAGAATCAGCGCTGA+AGG - chr7_4:50986424-50986443 None:intergenic 50.0%
!! AGCGCTGATTCTGTAACCAC+CGG + chr7_4:50986426-50986445 Msa1160890:CDS 50.0%
!! CAGCACCAAAAAGAAGCGCT+AGG + chr7_4:50986570-50986589 Msa1160890:CDS 50.0%
! GCCATCCTAGCGCTTCTTTT+TGG - chr7_4:50986578-50986597 None:intergenic 50.0%
!! TGATTTACCGCCGTTTTGGG+AGG + chr7_4:50986620-50986639 Msa1160890:CDS 50.0%
TCTTTCTCCTCCCAAAACGG+CGG - chr7_4:50986630-50986649 None:intergenic 50.0%
CCCTCTTTCTCCTCCCAAAA+CGG - chr7_4:50986633-50986652 None:intergenic 50.0%
!!! CCGTTTTGGGAGGAGAAAGA+GGG + chr7_4:50986630-50986649 Msa1160890:CDS 50.0%
!!! CGTTTTGGGAGGAGAAAGAG+GGG + chr7_4:50986631-50986650 Msa1160890:CDS 50.0%
! TCTCTGGGGAGGGATATTTG+CGG + chr7_4:50986704-50986723 Msa1160890:CDS 50.0%
AGGTAGGGGTAGTGTAGAGA+GGG + chr7_4:50986809-50986828 Msa1160890:CDS 50.0%
AGGGTGGAGAGTGAGACAAA+TGG + chr7_4:50986828-50986847 Msa1160890:CDS 50.0%
TACTAACCGTGGCACGTTGA+AGG + chr7_4:50986911-50986930 Msa1160890:CDS 50.0%
TAGGAGGACTCAAGATGCTG+AGG + chr7_4:50986953-50986972 Msa1160890:CDS 50.0%
CTCAAGATGCTGAGGAGTTG+AGG + chr7_4:50986961-50986980 Msa1160890:CDS 50.0%
CTACATTGGGAGCTGAGTTG+CGG + chr7_4:50987012-50987031 Msa1160890:CDS 50.0%
CTCCTGTGAAGAAATTGGGG+TGG + chr7_4:50987045-50987064 Msa1160890:CDS 50.0%
CTCCACCCCAATTTCTTCAC+AGG - chr7_4:50987050-50987069 None:intergenic 50.0%
CTGTGAAGAAATTGGGGTGG+AGG + chr7_4:50987048-50987067 Msa1160890:CDS 50.0%
TGAAGAAATTGGGGTGGAGG+AGG + chr7_4:50987051-50987070 Msa1160890:CDS 50.0%
TGTTAATGCGGGACAGAGTC+AGG + chr7_4:50987106-50987125 Msa1160890:CDS 50.0%
!! GAAGAGGAGATGGGCTGTTA+CGG + chr7_4:50987148-50987167 Msa1160890:CDS 50.0%
!! AAGAGGAGATGGGCTGTTAC+GGG + chr7_4:50987149-50987168 Msa1160890:CDS 50.0%
! CCAAAGACACTGCATTGGTG+GGG + chr7_4:50987558-50987577 Msa1160890:CDS 50.0%
!! AGGTGTTGGCTGCAAGTACA+TGG - chr7_4:50988035-50988054 None:intergenic 50.0%
CTGTGATGGTCACAAGCAAC+TGG - chr7_4:50988333-50988352 None:intergenic 50.0%
! GAAGGTACAAAAGAGGAGGG+AGG + chr7_4:50988516-50988535 Msa1160890:intron 50.0%
TGCATTCTGCTGCAGATTGC+AGG + chr7_4:50988547-50988566 Msa1160890:intron 50.0%
GCATTCTGCTGCAGATTGCA+GGG + chr7_4:50988548-50988567 Msa1160890:intron 50.0%
CATTCTGCTGCAGATTGCAG+GGG + chr7_4:50988549-50988568 Msa1160890:intron 50.0%
!! CGCAAGTTTGTGGCTTGCTT+AGG + chr7_4:50988604-50988623 Msa1160890:intron 50.0%
GGCATGTCTTGGCAGATGAT+TGG + chr7_4:50988942-50988961 Msa1160890:intron 50.0%
CAACTTAACTCGGGTCAGGA+TGG + chr7_4:50988988-50989007 Msa1160890:intron 50.0%
AGGATGGAACACAGTCAGTG+AGG + chr7_4:50989004-50989023 Msa1160890:intron 50.0%
TGTATGGAACACAGTCGGTG+AGG + chr7_4:50989044-50989063 Msa1160890:intron 50.0%
GTTCTTTCACCAAACTCCCC+TGG - chr7_4:50989245-50989264 None:intergenic 50.0%
ACTACGATAGGGCGATGCTT+TGG + chr7_4:50989402-50989421 Msa1160890:intron 50.0%
GGCGCGGAAATCAGAATCTT+AGG - chr7_4:50989661-50989680 None:intergenic 50.0%
AGATTTGGATGTTGTCGGCG+CGG - chr7_4:50989677-50989696 None:intergenic 50.0%
!!! GATGATGTTGTTTTGGGGGG+TGG + chr7_4:50989756-50989775 Msa1160890:intron 50.0%
!!! TGGCTTGGTTGGCCACTTTT+GGG + chr7_4:50989776-50989795 Msa1160890:intron 50.0%
GGGATAGTGCTAGCAGATTG+GGG + chr7_4:50989796-50989815 Msa1160890:intron 50.0%
GACCTTACTTCTGGTGTGCA+CGG - chr7_4:50990558-50990577 None:intergenic 50.0%
GAATGCCAAACAAAGGGCTC+AGG + chr7_4:50990740-50990759 Msa1160890:CDS 50.0%
AGTCTCAGAGCTTCGAGTAC+AGG + chr7_4:50990816-50990835 Msa1160890:CDS 50.0%
CGGCTCCATTAAGTACACTC+TGG - chr7_4:50990862-50990881 None:intergenic 50.0%
GAGTGTACTTAATGGAGCCG+TGG + chr7_4:50990862-50990881 Msa1160890:CDS 50.0%
TGTACTTAATGGAGCCGTGG+TGG + chr7_4:50990865-50990884 Msa1160890:CDS 50.0%
CTTCTTTCTGTCCAATGCGG+TGG - chr7_4:50990926-50990945 None:intergenic 50.0%
CGGCGAGGTATGTTTCGGAT+TGG - chr7_4:50985993-50986012 None:intergenic 55.0%
! AAGGTTCGCGGATTAAGCCG+AGG - chr7_4:50986080-50986099 None:intergenic 55.0%
CGCGTTCGATGTAACCGACT+TGG - chr7_4:50986152-50986171 None:intergenic 55.0%
!! ATGATGTGAGCGTCGAGGAG+AGG - chr7_4:50986195-50986214 None:intergenic 55.0%
GCGAGTGTTTGTGGGAACGA+TGG - chr7_4:50986229-50986248 None:intergenic 55.0%
GCGTGTTTCTTTAACGGCGG+CGG - chr7_4:50986394-50986413 None:intergenic 55.0%
GGCGCGTGTTTCTTTAACGG+CGG - chr7_4:50986397-50986416 None:intergenic 55.0%
!!! GCCGTTTTGGGAGGAGAAAG+AGG + chr7_4:50986629-50986648 Msa1160890:CDS 55.0%
GCAAATATCCCTCCCCAGAG+AGG - chr7_4:50986705-50986724 None:intergenic 55.0%
TGGGGAGGGATATTTGCGGA+CGG + chr7_4:50986708-50986727 Msa1160890:CDS 55.0%
AGGGATATTTGCGGACGGGA+TGG + chr7_4:50986713-50986732 Msa1160890:CDS 55.0%
GGGATATTTGCGGACGGGAT+GGG + chr7_4:50986714-50986733 Msa1160890:CDS 55.0%
TTTGCGGACGGGATGGGATT+AGG + chr7_4:50986720-50986739 Msa1160890:CDS 55.0%
TTGCGGACGGGATGGGATTA+GGG + chr7_4:50986721-50986740 Msa1160890:CDS 55.0%
GAGGTAGGGGTAGTGTAGAG+AGG + chr7_4:50986808-50986827 Msa1160890:CDS 55.0%
TAGGGGTAGTGTAGAGAGGG+TGG + chr7_4:50986812-50986831 Msa1160890:CDS 55.0%
! GGGGTGGAGGAGGATTGTTT+TGG + chr7_4:50987061-50987080 Msa1160890:CDS 55.0%
!! AGAGGAGATGGGCTGTTACG+GGG + chr7_4:50987150-50987169 Msa1160890:CDS 55.0%
ACGGGGACGCCTATTCAGAA+TGG + chr7_4:50987167-50987186 Msa1160890:CDS 55.0%
GACTGGGATGAGTCGATTGC+AGG + chr7_4:50987295-50987314 Msa1160890:CDS 55.0%
CCCCACCAATGCAGTGTCTT+TGG - chr7_4:50987561-50987580 None:intergenic 55.0%
ACGATAGGGCGATGCTTTGG+AGG + chr7_4:50989405-50989424 Msa1160890:intron 55.0%
!!! TGTTGTTTTGGGGGGTGGCT+TGG + chr7_4:50989761-50989780 Msa1160890:intron 55.0%
!!! GTGGCTTGGTTGGCCACTTT+TGG + chr7_4:50989775-50989794 Msa1160890:intron 55.0%
AGCCGTGCACACCAGAAGTA+AGG + chr7_4:50990553-50990572 Msa1160890:CDS 55.0%
ATGGATCGTGTCCACCGCAT+TGG + chr7_4:50990912-50990931 Msa1160890:CDS 55.0%
! TATCGCTGGCATGGGCATTG+AGG + chr7_4:50991058-50991077 Msa1160890:CDS 55.0%
TGGCCATTACGAAACCGGCG+AGG - chr7_4:50986008-50986027 None:intergenic 60.0%
CACTACTCCGGCACCATCAC+CGG + chr7_4:50986045-50986064 Msa1160890:CDS 60.0%
ATCACCGGCCGCGAAATCCT+CGG + chr7_4:50986060-50986079 Msa1160890:CDS 60.0%
TAAGCCGAGGATTTCGCGGC+CGG - chr7_4:50986067-50986086 None:intergenic 60.0%
! CGTGGATGATGTGAGCGTCG+AGG - chr7_4:50986200-50986219 None:intergenic 60.0%
TGGGAACGATGGCTTCGACG+TGG - chr7_4:50986218-50986237 None:intergenic 60.0%
GGGGAGGGATATTTGCGGAC+GGG + chr7_4:50986709-50986728 Msa1160890:CDS 60.0%
GGGAGCTGAGTTGCGGTGTT+CGG + chr7_4:50987019-50987038 Msa1160890:CDS 60.0%
TGCTGCAGATTGCAGGGGCT+AGG + chr7_4:50988554-50988573 Msa1160890:intron 60.0%
GCTGCAGATTGCAGGGGCTA+GGG + chr7_4:50988555-50988574 Msa1160890:intron 60.0%
!!! GTTTTGGGGGGTGGCTTGGT+TGG + chr7_4:50989765-50989784 Msa1160890:intron 60.0%
! GCGCCGACAAAGTGGACAAC+TGG - chr7_4:50990460-50990479 None:intergenic 60.0%
TCTGGTGTGCACGGCTCAGT+AGG - chr7_4:50990549-50990568 None:intergenic 60.0%
TCAACGGCAGGGTTCCACCA+CGG - chr7_4:50990882-50990901 None:intergenic 60.0%
GAGGATTTCGCGGCCGGTGA+TGG - chr7_4:50986061-50986080 None:intergenic 65.0%
GAGGAGAGGAGCGAGAGTGG+CGG - chr7_4:50986181-50986200 None:intergenic 65.0%
GTCGAGGAGAGGAGCGAGAG+TGG - chr7_4:50986184-50986203 None:intergenic 65.0%
ATCCCTCCCCAGAGAGGCTC+CGG - chr7_4:50986699-50986718 None:intergenic 65.0%
!! GAGAGGGAGCGCCGACAAAG+TGG - chr7_4:50990468-50990487 None:intergenic 65.0%
! TTCGCGGCCGGTGATGGTGC+CGG - chr7_4:50986055-50986074 None:intergenic 70.0%
AGGAGCGAGAGTGGCGGCGA+CGG - chr7_4:50986175-50986194 None:intergenic 70.0%
ATGCGCGGCCGGAGCCTCTC+TGG + chr7_4:50986688-50986707 Msa1160890:CDS 75.0%
TGCGCGGCCGGAGCCTCTCT+GGG + chr7_4:50986689-50986708 Msa1160890:CDS 75.0%
! GGCCGGAGCCTCTCTGGGGA+GGG + chr7_4:50986694-50986713 Msa1160890:CDS 75.0%
! GCGCGGCCGGAGCCTCTCTG+GGG + chr7_4:50986690-50986709 Msa1160890:CDS 80.0%
!! CGGCCGGAGCCTCTCTGGGG+AGG + chr7_4:50986693-50986712 Msa1160890:CDS 80.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 50985863 50991342 50985863 ID=Msa1160890;Name=Msa1160890
chr7_4 mRNA 50985863 50991342 50985863 ID=Msa1160890-mRNA-1;Parent=Msa1160890;Name=Msa1160890-mRNA-1;_AED=0.05;_eAED=0.05;_QI=95|0.25|0.6|0.6|1|1|5|236|921
chr7_4 exon 50985863 50987316 50985863 ID=Msa1160890-mRNA-1:exon:14319;Parent=Msa1160890-mRNA-1
chr7_4 exon 50987527 50987821 50987527 ID=Msa1160890-mRNA-1:exon:14320;Parent=Msa1160890-mRNA-1
chr7_4 exon 50988416 50988519 50988416 ID=Msa1160890-mRNA-1:exon:14321;Parent=Msa1160890-mRNA-1
chr7_4 exon 50989412 50989601 50989412 ID=Msa1160890-mRNA-1:exon:14322;Parent=Msa1160890-mRNA-1
chr7_4 exon 50990289 50991342 50990289 ID=Msa1160890-mRNA-1:exon:14323;Parent=Msa1160890-mRNA-1
chr7_4 five_prime_UTR 50985863 50985957 50985863 ID=Msa1160890-mRNA-1:five_prime_utr;Parent=Msa1160890-mRNA-1
chr7_4 CDS 50985958 50987316 50985958 ID=Msa1160890-mRNA-1:cds;Parent=Msa1160890-mRNA-1
chr7_4 CDS 50987527 50987821 50987527 ID=Msa1160890-mRNA-1:cds;Parent=Msa1160890-mRNA-1
chr7_4 CDS 50988416 50988519 50988416 ID=Msa1160890-mRNA-1:cds;Parent=Msa1160890-mRNA-1
chr7_4 CDS 50989412 50989601 50989412 ID=Msa1160890-mRNA-1:cds;Parent=Msa1160890-mRNA-1
chr7_4 CDS 50990289 50991106 50990289 ID=Msa1160890-mRNA-1:cds;Parent=Msa1160890-mRNA-1
chr7_4 three_prime_UTR 50991107 50991342 50991107 ID=Msa1160890-mRNA-1:three_prime_utr;Parent=Msa1160890-mRNA-1
Gene Sequence

>Msa1160890

ATGGAAGACTCACAAGAACCCTTCTCCCAATCCCAATCCGAAACATACCTCGCCGGTTTCGTAATGGCCAACATCGTCGGCATTAAACACTACTCCGGCACCATCACCGGCCGCGAAATCCTCGGCTTAATCCGCGAACCTTTAAACCCATACGACTCCAACGCCATCAAAGTCCTCAACACTCAAACGCTCCAAGTCGGTTACATCGAACGCGCCGTCGCCGCCACTCTCGCTCCTCTCCTCGACGCTCACATCATCCACGTCGAAGCCATCGTTCCCACAAACACTCGCTCTAACAATAACAAATTCCGTATCCCTTGTCAGATTCATATCTTCGCTCATCAATCTGCTTTTGACGCTGTTCATGACGCTTTTAACGGTTCCAATGTTCATTTCATTTCGTATAGTGATCCTTCTTTTACTCTTTCTCATTCCGCCGCCGTTAAAGAAACACGCGCCGACACCTTCAGCGCTGATTCTGTAACCACCGGTAATAATAATAGTAAAAACCTAGATCAAATTTTCAAACTCGTTCGAGAAAACCTAGCTTCCAAAACCCTAGTTTCTGAACCGTTAAACCCTCCTTCTAGCATTATTAAATCAGAGCTTCTGCAGCACCAAAAAGAAGCGCTAGGATGGCTTTATCATCGCGAAAGTGCTGATGATTTACCGCCGTTTTGGGAGGAGAAAGAGGGGAATTTTGTTAATGTGTTGACGAATTATCAAACTAATGCGCGGCCGGAGCCTCTCTGGGGAGGGATATTTGCGGACGGGATGGGATTAGGGAAGACGTTAACGTTGCTATCGTTGATTGGTTATGATAAAATGAAAATGAAAAGTGGGAAGAAAAGAGGTAGGGGTAGTGTAGAGAGGGTGGAGAGTGAGACAAATGGTACATTGATTGTTTGTCCTCCTTCTGTGATTTCAACATGGATAACTCAATTGGAGGAACATACTAACCGTGGCACGTTGAAGGTATATATGTATTATGGTGATAGGAGGACTCAAGATGCTGAGGAGTTGAGGAAGTATGATATTGTGTTGACTACTTATGCTACATTGGGAGCTGAGTTGCGGTGTTCGGATACTCCTGTGAAGAAATTGGGGTGGAGGAGGATTGTTTTGGATGAGGCGCATACGATCAAGAATGTTAATGCGGGACAGAGTCAGGCTGTGATTGCTTTGAATGCGAAGAGGAGATGGGCTGTTACGGGGACGCCTATTCAGAATGGTTCTTATGACTTGTTTTCTCTTATGGCTTTTTTGCATTTTGAGCCGTTTTCTATTAAGAGTTATTGGCAAAGCTTGGTTCAGCGACCTCTTAATCAAGGAAAACAGACTGGGATGAGTCGATTGCAGGTTTTGATGTCGGCAATATCATTGCGAAGAACCAAAGACACTGCATTGGTGGGGCTTCCACCTAAGATTGTTGAGACTTGTCATGTTGAACTTTCATTTGAAGAACGTAAACTGTATGATGAGGTTAAAGAGGAAATAAAGTCACTTATGATGCATCATAACAGCAACGACAGACTAGTATCTAGTTATTCCACTATACTAAGTATGATTCTAAGACTTCGTCAGATCTGTGCTGATTTTTCGATGGTTCCTTTGGATTTCAAGTCGTGTCTATTTTCTTCAACTGATATTGAAGTCATTGCTGCTTTGGATCTTCATATTGCCACTCTCATCTATGTATCACAAATCACAATTCTTAAAAGGTTGGATGGCTACTTTGTTTTTTTCAAATTGTGGAAGGGCGATGCTTTGGAGGAATATGTAAAGGTTTCTGAATCCTTGGTGGCTCAAATAAATTTGATTGCACAAGCACAACTCTTGGGCAAGATGCACATCCATGAACCTTCAGACCTTTCGACTATAATTGAATTAGCTCGTGGGTTAAAGGATGATTTGAATTTGACGCAAGGATTGAGAGGAATTAGAGTGGATGTTTCCAAGAACCCTGAATTGCTGCAAACATTAATTAGGATGCTACAAGATGGTGAAGATTTTGATTGTCCAATTTGTTTATCTCCCCCAACAGATATTGTAATTACATGCTGTGCTCATATTTTCTGCCGAGAATGTATTCTGAAAACTCTTCAGCGCAGCAATTCCAGTTGTCCACTTTGTCGGCGCTCCCTCTCAGAATCTGAGTTATTCTCAGCTCCCCCTGAATCTTTCAAGACTGATGATACTGATGATCCTACTGAGCCGTGCACACCAGAAGTAAGGTCGTCTACCAAAATCGCTACTTTGATAAAGCTTCTTACGGAATCAAGGGATCAAAATCCAGCTACAAAATCAGTTGTATTTTCACAATTCCGTAAGATGCTGCTGTTGTTAGAAGAACCTTTAAAAGCAGCTGGCTTTAAAACATTGCGTCTTGACGGGACAATGAATGCCAAACAAAGGGCTCAGGTTATTGAACAATTTCAACTCTCGGAAGTTGATGAGCCAATGATTCTGCTTGCAAGTCTCAGAGCTTCGAGTACAGGAATAAATCTTACTGCTGCCTCCAGAGTGTACTTAATGGAGCCGTGGTGGAACCCTGCCGTTGAAGAACAAGCAATGGATCGTGTCCACCGCATTGGACAGAAAGAAGAAGTGAAGATTGTTAGACTGATTGCAAAAAACAGCATCGAAGAGAAAATACTAATGTTGCAAGAAAAGAAGAAAATAATTGCAAGCCGAGGATCTGGGAGAAGATCAAAGGATATCGCTGGCATGGGCATTGAGGATCTCCGTTTTGTTTTAGGAGAATAG
Protein sequence

>Msa1160890

MEDSQEPFSQSQSETYLAGFVMANIVGIKHYSGTITGREILGLIREPLNPYDSNAIKVLNTQTLQVGYIERAVAATLAPLLDAHIIHVEAIVPTNTRSNNNKFRIPCQIHIFAHQSAFDAVHDAFNGSNVHFISYSDPSFTLSHSAAVKETRADTFSADSVTTGNNNSKNLDQIFKLVRENLASKTLVSEPLNPPSSIIKSELLQHQKEALGWLYHRESADDLPPFWEEKEGNFVNVLTNYQTNARPEPLWGGIFADGMGLGKTLTLLSLIGYDKMKMKSGKKRGRGSVERVESETNGTLIVCPPSVISTWITQLEEHTNRGTLKVYMYYGDRRTQDAEELRKYDIVLTTYATLGAELRCSDTPVKKLGWRRIVLDEAHTIKNVNAGQSQAVIALNAKRRWAVTGTPIQNGSYDLFSLMAFLHFEPFSIKSYWQSLVQRPLNQGKQTGMSRLQVLMSAISLRRTKDTALVGLPPKIVETCHVELSFEERKLYDEVKEEIKSLMMHHNSNDRLVSSYSTILSMILRLRQICADFSMVPLDFKSCLFSSTDIEVIAALDLHIATLIYVSQITILKRLDGYFVFFKLWKGDALEEYVKVSESLVAQINLIAQAQLLGKMHIHEPSDLSTIIELARGLKDDLNLTQGLRGIRVDVSKNPELLQTLIRMLQDGEDFDCPICLSPPTDIVITCCAHIFCRECILKTLQRSNSSCPLCRRSLSESELFSAPPESFKTDDTDDPTEPCTPEVRSSTKIATLIKLLTESRDQNPATKSVVFSQFRKMLLLLEEPLKAAGFKTLRLDGTMNAKQRAQVIEQFQLSEVDEPMILLASLRASSTGINLTAASRVYLMEPWWNPAVEEQAMDRVHRIGQKEEVKIVRLIAKNSIEEKILMLQEKKKIIASRGSGRRSKDIAGMGIEDLRFVLGE*