Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160900 | XP_003624928.1 | 97.539 | 447 | 11 | 0 | 1 | 447 | 1 | 447 | 0.0 | 902 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160900 | sp|Q9FHK9|MD26B_ARATH | 46.767 | 464 | 194 | 11 | 6 | 447 | 4 | 436 | 2.49e-119 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160900 | G7L5V2 | 97.539 | 447 | 11 | 0 | 1 | 447 | 1 | 447 | 0.0 | 902 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1160900 | TR | IWS1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160900 | MtrunA17_Chr7g0255811 | 97.523 | 444 | 11 | 0 | 4 | 447 | 1 | 444 | 0.0 | 895 |
| Msa1160900 | MtrunA17_Chr3g0129551 | 32.701 | 211 | 121 | 6 | 9 | 211 | 3 | 200 | 4.96e-22 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1160900 | AT5G05140.1 | 46.767 | 464 | 194 | 11 | 6 | 447 | 4 | 436 | 2.53e-120 | 358 |
| Msa1160900 | AT3G10820.1 | 41.686 | 439 | 207 | 9 | 1 | 437 | 1 | 392 | 1.55e-88 | 275 |
| Msa1160900 | AT3G10820.2 | 41.686 | 439 | 207 | 9 | 1 | 437 | 1 | 392 | 7.40e-86 | 274 |
| Msa1160900 | AT5G09850.1 | 30.317 | 221 | 114 | 5 | 9 | 211 | 3 | 201 | 3.91e-21 | 94.7 |
| Msa1160900 | AT5G09850.4 | 30.317 | 221 | 114 | 5 | 9 | 211 | 3 | 201 | 3.91e-21 | 94.7 |
| Msa1160900 | AT5G09850.2 | 30.317 | 221 | 114 | 5 | 9 | 211 | 3 | 201 | 3.91e-21 | 94.7 |
| Msa1160900 | AT5G09850.5 | 30.317 | 221 | 114 | 5 | 9 | 211 | 3 | 201 | 3.91e-21 | 94.7 |
| Msa1160900 | AT5G09850.3 | 30.317 | 221 | 114 | 5 | 9 | 211 | 3 | 201 | 1.29e-20 | 93.2 |
Find 141 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTGAAGCTATTGAATTT+TGG | 0.142103 | 7_4:-51022187 | None:intergenic |
| CCAAAGCTGTAATTGCTAAT+AGG | 0.172892 | 7_4:-51019427 | None:intergenic |
| CCATTGCCGATTGTGATTTC+CGG | 0.189148 | 7_4:-51021616 | None:intergenic |
| ATAGAAATCCCAATCGTTTC+TGG | 0.189498 | 7_4:+51021991 | Msa1160900:three_prime_UTR |
| TTCAACAACAGATGGATTTC+TGG | 0.196234 | 7_4:-51020559 | None:intergenic |
| ATTTCTATTGACAATAATTA+TGG | 0.198017 | 7_4:-51021976 | None:intergenic |
| TCACTTGGGTCATTGAAAAT+TGG | 0.233379 | 7_4:-51018988 | None:intergenic |
| TGAGCATTGAGAGGCCTCTT+AGG | 0.252560 | 7_4:-51021210 | None:intergenic |
| AATTGGTTTGATTCTTCTTC+AGG | 0.261010 | 7_4:-51018971 | None:intergenic |
| CATTGCCGATTGTGATTTCC+GGG | 0.275321 | 7_4:-51021615 | None:intergenic |
| ACATTTATATTACTTGCATT+AGG | 0.294733 | 7_4:+51022030 | Msa1160900:three_prime_UTR |
| TCAGCAGCCATTGGTTTATT+AGG | 0.298615 | 7_4:-51021096 | None:intergenic |
| AATTTCAAATCCATTATTCT+TGG | 0.299489 | 7_4:-51021914 | None:intergenic |
| CTCCTAGATTTAAACTCCTT+TGG | 0.299857 | 7_4:-51019214 | None:intergenic |
| TCTTCTATCAATTAAATGTT+TGG | 0.313119 | 7_4:-51021737 | None:intergenic |
| CATTTATATTACTTGCATTA+GGG | 0.318720 | 7_4:+51022031 | Msa1160900:three_prime_UTR |
| TATGTAATAAGCAGGTTTAT+AGG | 0.329790 | 7_4:+51022132 | Msa1160900:three_prime_UTR |
| AAACCAATGGCTGCTGATAC+TGG | 0.331234 | 7_4:+51021102 | Msa1160900:CDS |
| CCTATTAGCAATTACAGCTT+TGG | 0.340233 | 7_4:+51019427 | Msa1160900:CDS |
| CAAAGCTGTAATTGCTAATA+GGG | 0.344245 | 7_4:-51019426 | None:intergenic |
| TTGGAGTTCCATGGCTTACT+TGG | 0.351974 | 7_4:+51021947 | Msa1160900:three_prime_UTR |
| TTTGAAATTTGATCCTATCT+TGG | 0.352247 | 7_4:+51021928 | Msa1160900:three_prime_UTR |
| GCTTTCTTTGTTGCCCCAAC+TGG | 0.358676 | 7_4:+51020633 | Msa1160900:CDS |
| AGTTATCAACAAGCTGAAAA+TGG | 0.359783 | 7_4:+51021380 | Msa1160900:CDS |
| TTGTATTGTCCTTTGCCTCT+TGG | 0.365164 | 7_4:-51021532 | None:intergenic |
| AGGACTCCCGTCACCTCCTT+TGG | 0.378418 | 7_4:+51020602 | Msa1160900:CDS |
| TTACTTTCGTTCATCGAATT+CGG | 0.381995 | 7_4:+51019141 | Msa1160900:CDS |
| AATTTGCAGTCAACTGAGAT+TGG | 0.383050 | 7_4:+51019933 | Msa1160900:intron |
| CGCTGAATGTTCGAGTTTAG+CGG | 0.385713 | 7_4:-51021135 | None:intergenic |
| CTCTTGAAGTCTCCGCTTAG+TGG | 0.392632 | 7_4:-51021357 | None:intergenic |
| CGTTGGACAGACCCTTGCTT+TGG | 0.393563 | 7_4:-51021576 | None:intergenic |
| TGTTATGCTGAATCGTTGTA+AGG | 0.399819 | 7_4:+51019264 | Msa1160900:CDS |
| GTGCTGACTCTTGTTGTCCT+TGG | 0.405815 | 7_4:-51021046 | None:intergenic |
| TTGTCACGGTTCTTGTTGAA+TGG | 0.419455 | 7_4:-51020946 | None:intergenic |
| GTACTCAAAGTTTAAACCTT+GGG | 0.422898 | 7_4:-51021874 | None:intergenic |
| GATTGCAGTAGGGAAGAAAA+TGG | 0.423504 | 7_4:+51019388 | Msa1160900:CDS |
| GTCTAAGTGTTCAGATGATT+CGG | 0.425620 | 7_4:+51021322 | Msa1160900:CDS |
| CGGAAATCACAATCGGCAAT+GGG | 0.431117 | 7_4:+51021617 | Msa1160900:CDS |
| AGAGTTCAATTGTACCAGTT+GGG | 0.432169 | 7_4:-51020647 | None:intergenic |
| AGCTCTTGGCTCTCAAACTA+AGG | 0.432229 | 7_4:+51020981 | Msa1160900:CDS |
| TTGGGATTGAAGATGAAGTC+AGG | 0.434760 | 7_4:+51019097 | Msa1160900:intron |
| GATCCTATCTTGGAGTTCCA+TGG | 0.440157 | 7_4:+51021938 | Msa1160900:three_prime_UTR |
| CCGTCACCTCCTTTGGATGA+AGG | 0.458747 | 7_4:+51020609 | Msa1160900:CDS |
| AAGCCATGGAACTCCAAGAT+AGG | 0.459595 | 7_4:-51021941 | None:intergenic |
| TGAGAGTTCGTGCTAGTTGA+CGG | 0.465786 | 7_4:-51019998 | None:intergenic |
| CTGGCTTTCTTCCGTTGTCA+CGG | 0.466235 | 7_4:-51020960 | None:intergenic |
| CGTCACCTCCTTTGGATGAA+GGG | 0.466548 | 7_4:+51020610 | Msa1160900:CDS |
| AACGGAAGAAAGCCAGCTCT+TGG | 0.469024 | 7_4:+51020967 | Msa1160900:CDS |
| CATGTGATTATGTAATAAGC+AGG | 0.469847 | 7_4:+51022124 | Msa1160900:three_prime_UTR |
| GGAAAGAGCTGGTCAATGCC+TGG | 0.471258 | 7_4:+51020368 | Msa1160900:CDS |
| ATGTTTGTAGCTTCAGAAGA+AGG | 0.472561 | 7_4:+51020525 | Msa1160900:intron |
| AGCATGTTCTCTAAAGATGA+AGG | 0.472793 | 7_4:+51021691 | Msa1160900:three_prime_UTR |
| TCATCACCATTATCATCATC+AGG | 0.473283 | 7_4:-51019313 | None:intergenic |
| GTTTGAAATGTGTATTCCGT+TGG | 0.475671 | 7_4:-51021593 | None:intergenic |
| TGTACTCAAAGTTTAAACCT+TGG | 0.494198 | 7_4:-51021875 | None:intergenic |
| GTCCAAAGGAGTTTAAATCT+AGG | 0.495047 | 7_4:+51019212 | Msa1160900:CDS |
| ACAGATGGATTTCTGGAATC+CGG | 0.496893 | 7_4:-51020552 | None:intergenic |
| GAGCATTGAGAGGCCTCTTA+GGG | 0.497467 | 7_4:-51021209 | None:intergenic |
| GCAAAGGACAATACAAGTAA+TGG | 0.500794 | 7_4:+51021539 | Msa1160900:CDS |
| CCGGAAATCACAATCGGCAA+TGG | 0.503234 | 7_4:+51021616 | Msa1160900:CDS |
| TTAGTTTGAGAGCCAAGAGC+TGG | 0.503363 | 7_4:-51020979 | None:intergenic |
| GAAAATGAAGAAGAGGAAGA+AGG | 0.503793 | 7_4:+51020579 | Msa1160900:CDS |
| TAAGATGTCCAGAAACGATT+GGG | 0.504122 | 7_4:-51021999 | None:intergenic |
| CAAGAGAAGTTCTGTTAGAG+AGG | 0.509666 | 7_4:+51019342 | Msa1160900:CDS |
| AAGATTATACCTCATCTTCA+CGG | 0.513302 | 7_4:-51019534 | None:intergenic |
| TGCTGCTTCTGATTGTCCAA+AGG | 0.514908 | 7_4:+51019198 | Msa1160900:CDS |
| AGAGCAAGGTGGATTGCAGT+AGG | 0.520399 | 7_4:+51019377 | Msa1160900:CDS |
| TTTCTATGCTCTCAAGGAGG+GGG | 0.522651 | 7_4:-51021766 | None:intergenic |
| GCAATCACAACTTGCTGCTG+AGG | 0.525782 | 7_4:+51019483 | Msa1160900:CDS |
| CGGCCAGTATCAGCAGCCAT+TGG | 0.526346 | 7_4:-51021105 | None:intergenic |
| CACAATCGGCAATGGGGCAA+CGG | 0.528995 | 7_4:+51021624 | Msa1160900:CDS |
| CTTGTTGTCCTTGGCAGTGA+CGG | 0.530853 | 7_4:-51021037 | None:intergenic |
| ATAAATGATCTTCCAAAGCA+AGG | 0.538473 | 7_4:+51021564 | Msa1160900:CDS |
| GTCACCTCCTTTGGATGAAG+GGG | 0.541178 | 7_4:+51020611 | Msa1160900:CDS |
| GAGTTTAAATCTAGGAGAGA+TGG | 0.543491 | 7_4:+51019220 | Msa1160900:CDS |
| GTGAATCATCTAAGAAAGCA+TGG | 0.544384 | 7_4:+51019963 | Msa1160900:CDS |
| GGTTTAAACTTTGAGTACAT+AGG | 0.545160 | 7_4:+51021879 | Msa1160900:three_prime_UTR |
| GGGTGCTAGCAAAGAGAGCA+AGG | 0.546467 | 7_4:+51019363 | Msa1160900:CDS |
| AAAACAGTACTGTCCCTAAG+AGG | 0.547218 | 7_4:+51021196 | Msa1160900:CDS |
| TAATTGCAGCCAAGAGGCAA+AGG | 0.551496 | 7_4:+51021523 | Msa1160900:intron |
| CTGCTGATACTGGCCGTGCA+AGG | 0.551930 | 7_4:+51021112 | Msa1160900:CDS |
| TCAAACCCGGAAATCACAAT+CGG | 0.553682 | 7_4:+51021610 | Msa1160900:CDS |
| TGTAAAGTTCTTCGATGGCA+TGG | 0.555348 | 7_4:+51020779 | Msa1160900:intron |
| TGTTGTTGAAAATGAAGAAG+AGG | 0.557042 | 7_4:+51020572 | Msa1160900:CDS |
| TCGAGTTTAGCGGCCTTGCA+CGG | 0.559976 | 7_4:-51021125 | None:intergenic |
| CATGTTGCTACAGTCTGACT+CGG | 0.562250 | 7_4:+51019750 | Msa1160900:intron |
| ACGGCTGTTTCATTAGATGC+CGG | 0.562358 | 7_4:-51021018 | None:intergenic |
| TAAATGATCTTCCAAAGCAA+GGG | 0.564834 | 7_4:+51021565 | Msa1160900:CDS |
| AGGCATCTTCGGCTCCACAT+TGG | 0.566230 | 7_4:-51021163 | None:intergenic |
| GAGAGTTCAATTGTACCAGT+TGG | 0.566913 | 7_4:-51020648 | None:intergenic |
| CCTTCATCCAAAGGAGGTGA+CGG | 0.567401 | 7_4:-51020609 | None:intergenic |
| AAGATGAAGTCAGGGTCACT+TGG | 0.568881 | 7_4:+51019106 | Msa1160900:intron |
| CGGAATACACATTTCAAACC+CGG | 0.569195 | 7_4:+51021597 | Msa1160900:CDS |
| GCTGGTCAATGCCTGGGTGA+AGG | 0.569390 | 7_4:+51020375 | Msa1160900:CDS |
| TTCGATGGCATGGATGATGA+TGG | 0.571056 | 7_4:+51020789 | Msa1160900:CDS |
| GAGTTCAATTGTACCAGTTG+GGG | 0.574661 | 7_4:-51020646 | None:intergenic |
| GTAAGATGTCCAGAAACGAT+TGG | 0.574945 | 7_4:-51022000 | None:intergenic |
| TAGGGAAGAAAATGGAGTGA+TGG | 0.575118 | 7_4:+51019396 | Msa1160900:CDS |
| CTTCATCCAAAGGAGGTGAC+GGG | 0.575720 | 7_4:-51020608 | None:intergenic |
| GAATTTACACAAGCTCATTG+AGG | 0.578473 | 7_4:-51022098 | None:intergenic |
| TGGTACAATTGAACTCTCAC+AGG | 0.578719 | 7_4:+51020653 | Msa1160900:CDS |
| GTTATGCTGAATCGTTGTAA+GGG | 0.581949 | 7_4:+51019265 | Msa1160900:CDS |
| GAGCAAGGTGGATTGCAGTA+GGG | 0.582197 | 7_4:+51019378 | Msa1160900:CDS |
| GCTCTCAAACTAAGGACAAG+AGG | 0.585924 | 7_4:+51020989 | Msa1160900:CDS |
| AAGAAAGCCCCTTCATCCAA+AGG | 0.586587 | 7_4:-51020618 | None:intergenic |
| TTCTAGTGGATGGAAAGAGC+TGG | 0.587363 | 7_4:+51020357 | Msa1160900:intron |
| ACATCTTGCTGAGCATTGAG+AGG | 0.588536 | 7_4:-51021219 | None:intergenic |
| CAAAGCAAGGGTCTGTCCAA+CGG | 0.592243 | 7_4:+51021577 | Msa1160900:CDS |
| GGAACAATCCAAGTAAGCCA+TGG | 0.593320 | 7_4:-51021955 | None:intergenic |
| TGGGATTGAAGATGAAGTCA+GGG | 0.594781 | 7_4:+51019098 | Msa1160900:intron |
| TCTAAGAAAGCATGGATCGA+AGG | 0.595986 | 7_4:+51019971 | Msa1160900:CDS |
| AATGAAGAAGAGGAAGAAGG+AGG | 0.597918 | 7_4:+51020582 | Msa1160900:CDS |
| CAGGGTCACTTGGTCAGTGG+AGG | 0.598081 | 7_4:+51019116 | Msa1160900:CDS |
| GAAACATCGATTATTTCCCA+AGG | 0.598777 | 7_4:+51021858 | Msa1160900:three_prime_UTR |
| AAGAGAAGTTCTGTTAGAGA+GGG | 0.600208 | 7_4:+51019343 | Msa1160900:CDS |
| ACTCTCTGTCGATCTTCTGA+AGG | 0.600474 | 7_4:+51019810 | Msa1160900:CDS |
| TTCTATGCTCTCAAGGAGGG+GGG | 0.604868 | 7_4:-51021765 | None:intergenic |
| GACGATGTAAAGTTCTTCGA+TGG | 0.605011 | 7_4:+51020774 | Msa1160900:intron |
| AATTATTAATTGCAGCCAAG+AGG | 0.608124 | 7_4:+51021517 | Msa1160900:intron |
| TCAACAACCACACCTGTCGC+AGG | 0.609609 | 7_4:+51020400 | Msa1160900:CDS |
| TGAAACAGCCGTCACTGCCA+AGG | 0.610149 | 7_4:+51021029 | Msa1160900:CDS |
| GCAGTCAACTGAGATTGGAA+AGG | 0.610845 | 7_4:+51019938 | Msa1160900:intron |
| TGCTGTTTGAGTCTCTGAGG+AGG | 0.611179 | 7_4:+51019773 | Msa1160900:CDS |
| CATTCAGCGAAAAGCCAATG+TGG | 0.612860 | 7_4:+51021149 | Msa1160900:CDS |
| TCTCAATAACCGTGAAGATG+AGG | 0.613333 | 7_4:+51019525 | Msa1160900:CDS |
| AATTCTACCTGCGACAGGTG+TGG | 0.614711 | 7_4:-51020407 | None:intergenic |
| GAAAGAGCTGGTCAATGCCT+GGG | 0.615774 | 7_4:+51020369 | Msa1160900:CDS |
| AGTCAGGGTCACTTGGTCAG+TGG | 0.617965 | 7_4:+51019113 | Msa1160900:CDS |
| TTCAACAAGAACCGTGACAA+CGG | 0.624350 | 7_4:+51020949 | Msa1160900:CDS |
| TCTGTGCCTGATGATGATAA+TGG | 0.629006 | 7_4:+51019307 | Msa1160900:CDS |
| GGTTGTTGACGCCTTCACCC+AGG | 0.632232 | 7_4:-51020386 | None:intergenic |
| CGGTGCTGTTTGAGTCTCTG+AGG | 0.632670 | 7_4:+51019770 | Msa1160900:CDS |
| GGTGAGGCCTAATAAACCAA+TGG | 0.639487 | 7_4:+51021089 | Msa1160900:CDS |
| TCGTTGTAAGGGGTGTGAGA+AGG | 0.640457 | 7_4:+51019276 | Msa1160900:CDS |
| AAGCAGCAACAACAATTGCA+TGG | 0.641026 | 7_4:-51019183 | None:intergenic |
| AGCTTCAGAAGAAGGCACAC+CGG | 0.647483 | 7_4:+51020533 | Msa1160900:intron |
| TTATGCTGAATCGTTGTAAG+GGG | 0.662020 | 7_4:+51019266 | Msa1160900:CDS |
| AAAGCCCCTTCATCCAAAGG+AGG | 0.683333 | 7_4:-51020615 | None:intergenic |
| GGAAATCACAATCGGCAATG+GGG | 0.692012 | 7_4:+51021618 | Msa1160900:CDS |
| CTAAGCTTGAAGCCACTAAG+CGG | 0.697672 | 7_4:+51021345 | Msa1160900:CDS |
| TGCTAGCAAAGAGAGCAAGG+TGG | 0.724881 | 7_4:+51019366 | Msa1160900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTTAAATTTGATATTCT+GGG | - | chr7_4:51018828-51018847 | None:intergenic | 10.0% |
| !! | TTAATTTAAATTTGATATTC+TGG | - | chr7_4:51018829-51018848 | None:intergenic | 10.0% |
| !! | ATTGTTTATTATAACATATT+TGG | + | chr7_4:51019039-51019058 | Msa1160900:intron | 10.0% |
| !! | AATTTAAATTTGATATTCTG+GGG | - | chr7_4:51018827-51018846 | None:intergenic | 15.0% |
| !!! | AGTATGATTTATTTTTTTCA+TGG | + | chr7_4:51020024-51020043 | Msa1160900:intron | 15.0% |
| !! | ATTACAAAATTAATTCATGT+TGG | + | chr7_4:51020488-51020507 | Msa1160900:intron | 15.0% |
| !!! | TTAAATTGATGATTGTAAAT+GGG | + | chr7_4:51020892-51020911 | Msa1160900:intron | 15.0% |
| !! | ATTTCTATTGACAATAATTA+TGG | - | chr7_4:51021979-51021998 | None:intergenic | 15.0% |
| !!! | ATTGATTCTTTTGTTGTTTT+GGG | + | chr7_4:51019079-51019098 | Msa1160900:intron | 20.0% |
| !!! | TGTTTTGATATGGATTTTTT+TGG | + | chr7_4:51019655-51019674 | Msa1160900:intron | 20.0% |
| !!! | TGGTTTATTTTATACAATCA+TGG | + | chr7_4:51020072-51020091 | Msa1160900:intron | 20.0% |
| !! | AAAATGGTTCAAATTAACTA+AGG | - | chr7_4:51020159-51020178 | None:intergenic | 20.0% |
| !! | GATATGAATCAAAACAATAA+CGG | - | chr7_4:51020248-51020267 | None:intergenic | 20.0% |
| !!! | ATCTGTTAAATGTTTTCAAT+TGG | + | chr7_4:51020290-51020309 | Msa1160900:intron | 20.0% |
| !!! | TAATCTTTTCTAATTTCTAG+TGG | + | chr7_4:51020343-51020362 | Msa1160900:intron | 20.0% |
| !! | TTGAAATATAAGTTTGAGAA+TGG | - | chr7_4:51020701-51020720 | None:intergenic | 20.0% |
| !! | TTCTCAAACTTATATTTCAA+AGG | + | chr7_4:51020701-51020720 | Msa1160900:intron | 20.0% |
| !! | TGTATATATGAAACTGAATT+TGG | + | chr7_4:51020725-51020744 | Msa1160900:intron | 20.0% |
| !! | GTATATATGAAACTGAATTT+GGG | + | chr7_4:51020726-51020745 | Msa1160900:intron | 20.0% |
| !!! | CTTAAATTGATGATTGTAAA+TGG | + | chr7_4:51020891-51020910 | Msa1160900:intron | 20.0% |
| !!! | TAAATTGATGATTGTAAATG+GGG | + | chr7_4:51020893-51020912 | Msa1160900:intron | 20.0% |
| !! | TCTTCTATCAATTAAATGTT+TGG | - | chr7_4:51021740-51021759 | None:intergenic | 20.0% |
| !! | AAACTCTATTCAAGTAAAAA+TGG | - | chr7_4:51021810-51021829 | None:intergenic | 20.0% |
| !!! | TTTTGTTTATCCAAGAATAA+TGG | + | chr7_4:51021904-51021923 | Msa1160900:three_prime_UTR | 20.0% |
| !! | AATTTCAAATCCATTATTCT+TGG | - | chr7_4:51021917-51021936 | None:intergenic | 20.0% |
| !! | ACATTTATATTACTTGCATT+AGG | + | chr7_4:51022030-51022049 | Msa1160900:three_prime_UTR | 20.0% |
| !! | CATTTATATTACTTGCATTA+GGG | + | chr7_4:51022031-51022050 | Msa1160900:three_prime_UTR | 20.0% |
| !!! | AAGGTTATTTCTTCTTTTTG+AGG | + | chr7_4:51018563-51018582 | Msa1160900:five_prime_UTR | 25.0% |
| !!! | TTTCTTCTTTTTGAGGTTTT+TGG | + | chr7_4:51018570-51018589 | Msa1160900:five_prime_UTR | 25.0% |
| !! | TGTATTGTTTCACATTTTTC+TGG | - | chr7_4:51018608-51018627 | None:intergenic | 25.0% |
| ! | AATTTGATTGGATCAATGTT+CGG | - | chr7_4:51018789-51018808 | None:intergenic | 25.0% |
| !! | TCCAATCAAATTTTCCTAAA+TGG | + | chr7_4:51018797-51018816 | Msa1160900:intron | 25.0% |
| !! | CCAATCAAATTTTCCTAAAT+GGG | + | chr7_4:51018798-51018817 | Msa1160900:intron | 25.0% |
| !!! | TTTCGTCATTGTTTTATTCA+GGG | + | chr7_4:51018935-51018954 | Msa1160900:intron | 25.0% |
| !!! | AACTCAATTTTTTCTCACTT+GGG | - | chr7_4:51019005-51019024 | None:intergenic | 25.0% |
| !!! | AAACTCAATTTTTTCTCACT+TGG | - | chr7_4:51019006-51019025 | None:intergenic | 25.0% |
| !!! | AAAAATTGAGTTTTGAATCG+TGG | + | chr7_4:51019013-51019032 | Msa1160900:intron | 25.0% |
| !!! | AAAATTGAGTTTTGAATCGT+GGG | + | chr7_4:51019014-51019033 | Msa1160900:intron | 25.0% |
| !!! | GATTGATTCTTTTGTTGTTT+TGG | + | chr7_4:51019078-51019097 | Msa1160900:intron | 25.0% |
| !! | ATGTTTGATGTGATGATTTT+TGG | + | chr7_4:51019624-51019643 | Msa1160900:intron | 25.0% |
| !!! | TTGATATGGATTTTTTTGGA+TGG | + | chr7_4:51019659-51019678 | Msa1160900:intron | 25.0% |
| ! | TCACTATCATTACATAATCA+TGG | + | chr7_4:51020119-51020138 | Msa1160900:intron | 25.0% |
| !!! | AGTTTAGAATTTGAGTTGTT+CGG | - | chr7_4:51020319-51020338 | None:intergenic | 25.0% |
| !! | TTTTATCTACCTTATTAGTG+TGG | + | chr7_4:51020430-51020449 | Msa1160900:intron | 25.0% |
| ! | ATAAGTTTGAGAATGGAAAA+AGG | - | chr7_4:51020694-51020713 | None:intergenic | 25.0% |
| !! | GCATAAATTTTGTAAGTTTG+TGG | + | chr7_4:51021267-51021286 | Msa1160900:intron | 25.0% |
| !!! | AGAGTTTATTTTGATTGTAG+AGG | + | chr7_4:51021823-51021842 | Msa1160900:three_prime_UTR | 25.0% |
| !!! | GAGTTTATTTTGATTGTAGA+GGG | + | chr7_4:51021824-51021843 | Msa1160900:three_prime_UTR | 25.0% |
| !! | TTTGAAATTTGATCCTATCT+TGG | + | chr7_4:51021928-51021947 | Msa1160900:three_prime_UTR | 25.0% |
| ! | TATGTAATAAGCAGGTTTAT+AGG | + | chr7_4:51022132-51022151 | Msa1160900:three_prime_UTR | 25.0% |
| !!! | GTGTTGTTTTCTTTTGTTTC+TGG | + | chr7_4:51018682-51018701 | Msa1160900:intron | 30.0% |
| !! | TTTTGGATTTGGAACAGATT+CGG | - | chr7_4:51018727-51018746 | None:intergenic | 30.0% |
| !!! | TGATGATATGGTTTTGGATT+TGG | - | chr7_4:51018738-51018757 | None:intergenic | 30.0% |
| !! | TGATGATGATGATATGGTTT+TGG | - | chr7_4:51018744-51018763 | None:intergenic | 30.0% |
| ! | TGATGATGATGATGATGATA+TGG | - | chr7_4:51018750-51018769 | None:intergenic | 30.0% |
| TCAATGTTCGGTAAGAAAAT+TGG | - | chr7_4:51018777-51018796 | None:intergenic | 30.0% | |
| CCCATTTAGGAAAATTTGAT+TGG | - | chr7_4:51018801-51018820 | None:intergenic | 30.0% | |
| TGACGAAAGAATGATCAAAA+GGG | - | chr7_4:51018923-51018942 | None:intergenic | 30.0% | |
| ATGACGAAAGAATGATCAAA+AGG | - | chr7_4:51018924-51018943 | None:intergenic | 30.0% | |
| !! | CTTTCGTCATTGTTTTATTC+AGG | + | chr7_4:51018934-51018953 | Msa1160900:intron | 30.0% |
| !! | AATTGGTTTGATTCTTCTTC+AGG | - | chr7_4:51018974-51018993 | None:intergenic | 30.0% |
| TTACTTTCGTTCATCGAATT+CGG | + | chr7_4:51019141-51019160 | Msa1160900:CDS | 30.0% | |
| CAAAGCTGTAATTGCTAATA+GGG | - | chr7_4:51019429-51019448 | None:intergenic | 30.0% | |
| AAGATTATACCTCATCTTCA+CGG | - | chr7_4:51019537-51019556 | None:intergenic | 30.0% | |
| !! | TGATGTGATGATTTTTGGAA+AGG | + | chr7_4:51019629-51019648 | Msa1160900:intron | 30.0% |
| !!! | GGAAAGGATATGTTTTGATA+TGG | + | chr7_4:51019645-51019664 | Msa1160900:intron | 30.0% |
| !! | GCATTTTTGTTCTTGTTTGA+AGG | + | chr7_4:51019681-51019700 | Msa1160900:intron | 30.0% |
| CACATGACTAACTAAGAAAA+TGG | - | chr7_4:51020175-51020194 | None:intergenic | 30.0% | |
| TTGACACCAAAACTTTAGAT+AGG | + | chr7_4:51020210-51020229 | Msa1160900:intron | 30.0% | |
| !! | CATTCACCTATCTAAAGTTT+TGG | - | chr7_4:51020219-51020238 | None:intergenic | 30.0% |
| !!! | CTTTTCTAATTTCTAGTGGA+TGG | + | chr7_4:51020347-51020366 | Msa1160900:intron | 30.0% |
| TCATCAATACCACACTAATA+AGG | - | chr7_4:51020442-51020461 | None:intergenic | 30.0% | |
| ATTGATGAGTACAATTATGC+TGG | + | chr7_4:51020454-51020473 | Msa1160900:intron | 30.0% | |
| ! | TCTTCATTTTCAACAACAGA+TGG | - | chr7_4:51020570-51020589 | None:intergenic | 30.0% |
| TGTTGTTGAAAATGAAGAAG+AGG | + | chr7_4:51020572-51020591 | Msa1160900:CDS | 30.0% | |
| TTCCTTGTGTTGTATATATC+TGG | + | chr7_4:51020752-51020771 | Msa1160900:intron | 30.0% | |
| ! | AATCATCAATTTAAGACGAG+GGG | - | chr7_4:51020886-51020905 | None:intergenic | 30.0% |
| ! | CAATCATCAATTTAAGACGA+GGG | - | chr7_4:51020887-51020906 | None:intergenic | 30.0% |
| ! | ACAATCATCAATTTAAGACG+AGG | - | chr7_4:51020888-51020907 | None:intergenic | 30.0% |
| ! | ACAGTACTGTTTTCGATTTT+CGG | - | chr7_4:51021189-51021208 | None:intergenic | 30.0% |
| !! | CTTCTGAAACGCAAAAATTA+AGG | - | chr7_4:51021303-51021322 | None:intergenic | 30.0% |
| AGTTATCAACAAGCTGAAAA+TGG | + | chr7_4:51021380-51021399 | Msa1160900:CDS | 30.0% | |
| CATCAATGAGTTATGAATTG+AGG | - | chr7_4:51021485-51021504 | None:intergenic | 30.0% | |
| AATTATTAATTGCAGCCAAG+AGG | + | chr7_4:51021517-51021536 | Msa1160900:intron | 30.0% | |
| ATAAATGATCTTCCAAAGCA+AGG | + | chr7_4:51021564-51021583 | Msa1160900:CDS | 30.0% | |
| TAAATGATCTTCCAAAGCAA+GGG | + | chr7_4:51021565-51021584 | Msa1160900:CDS | 30.0% | |
| ! | AAGATAGAGCAACTATTTTC+AGG | + | chr7_4:51021650-51021669 | Msa1160900:exon | 30.0% |
| !!! | TGTTATTTTCTATGCTCTCA+AGG | - | chr7_4:51021775-51021794 | None:intergenic | 30.0% |
| GTACTCAAAGTTTAAACCTT+GGG | - | chr7_4:51021877-51021896 | None:intergenic | 30.0% | |
| TGTACTCAAAGTTTAAACCT+TGG | - | chr7_4:51021878-51021897 | None:intergenic | 30.0% | |
| GGTTTAAACTTTGAGTACAT+AGG | + | chr7_4:51021879-51021898 | Msa1160900:three_prime_UTR | 30.0% | |
| CATGTGATTATGTAATAAGC+AGG | + | chr7_4:51022124-51022143 | Msa1160900:three_prime_UTR | 30.0% | |
| TCACTTGGGTCATTGAAAAT+TGG | - | chr7_4:51018991-51019010 | None:intergenic | 35.0% | |
| GTCCAAAGGAGTTTAAATCT+AGG | + | chr7_4:51019212-51019231 | Msa1160900:CDS | 35.0% | |
| CTCCTAGATTTAAACTCCTT+TGG | - | chr7_4:51019217-51019236 | None:intergenic | 35.0% | |
| GAGTTTAAATCTAGGAGAGA+TGG | + | chr7_4:51019220-51019239 | Msa1160900:CDS | 35.0% | |
| TGTTATGCTGAATCGTTGTA+AGG | + | chr7_4:51019264-51019283 | Msa1160900:CDS | 35.0% | |
| GTTATGCTGAATCGTTGTAA+GGG | + | chr7_4:51019265-51019284 | Msa1160900:CDS | 35.0% | |
| TTATGCTGAATCGTTGTAAG+GGG | + | chr7_4:51019266-51019285 | Msa1160900:CDS | 35.0% | |
| TCATCACCATTATCATCATC+AGG | - | chr7_4:51019316-51019335 | None:intergenic | 35.0% | |
| AAGAGAAGTTCTGTTAGAGA+GGG | + | chr7_4:51019343-51019362 | Msa1160900:CDS | 35.0% | |
| CCAAAGCTGTAATTGCTAAT+AGG | - | chr7_4:51019430-51019449 | None:intergenic | 35.0% | |
| CCTATTAGCAATTACAGCTT+TGG | + | chr7_4:51019427-51019446 | Msa1160900:CDS | 35.0% | |
| ! | TGAATCTTTCTTTGTCGCTT+TGG | + | chr7_4:51019840-51019859 | Msa1160900:intron | 35.0% |
| !! | GAATCTTTCTTTGTCGCTTT+GGG | + | chr7_4:51019841-51019860 | Msa1160900:intron | 35.0% |
| !! | AATCTTTCTTTGTCGCTTTG+GGG | + | chr7_4:51019842-51019861 | Msa1160900:intron | 35.0% |
| AATTTGCAGTCAACTGAGAT+TGG | + | chr7_4:51019933-51019952 | Msa1160900:intron | 35.0% | |
| GTGAATCATCTAAGAAAGCA+TGG | + | chr7_4:51019963-51019982 | Msa1160900:CDS | 35.0% | |
| ! | TGGTGTCAATGTTAACATCA+TGG | - | chr7_4:51020199-51020218 | None:intergenic | 35.0% |
| CTTTAGATAGGTGAATGACT+TGG | + | chr7_4:51020222-51020241 | Msa1160900:intron | 35.0% | |
| TAAAAAATTCTACCTGCGAC+AGG | - | chr7_4:51020415-51020434 | None:intergenic | 35.0% | |
| ATGTTTGTAGCTTCAGAAGA+AGG | + | chr7_4:51020525-51020544 | Msa1160900:intron | 35.0% | |
| ! | TTCAACAACAGATGGATTTC+TGG | - | chr7_4:51020562-51020581 | None:intergenic | 35.0% |
| GAAAATGAAGAAGAGGAAGA+AGG | + | chr7_4:51020579-51020598 | Msa1160900:CDS | 35.0% | |
| AGAGTTCAATTGTACCAGTT+GGG | - | chr7_4:51020650-51020669 | None:intergenic | 35.0% | |
| GTCCAGATATATACAACACA+AGG | - | chr7_4:51020757-51020776 | None:intergenic | 35.0% | |
| ! | TAAGGACAAGAGGAATTTTC+CGG | + | chr7_4:51020999-51021018 | Msa1160900:CDS | 35.0% |
| GTCTAAGTGTTCAGATGATT+CGG | + | chr7_4:51021322-51021341 | Msa1160900:CDS | 35.0% | |
| GCAAAGGACAATACAAGTAA+TGG | + | chr7_4:51021539-51021558 | Msa1160900:CDS | 35.0% | |
| ! | GTTTGAAATGTGTATTCCGT+TGG | - | chr7_4:51021596-51021615 | None:intergenic | 35.0% |
| !! | ATAGAGCAACTATTTTCAGG+AGG | + | chr7_4:51021653-51021672 | Msa1160900:exon | 35.0% |
| !! | TAGAGCAACTATTTTCAGGA+GGG | + | chr7_4:51021654-51021673 | Msa1160900:exon | 35.0% |
| ! | AGCATGTTCTCTAAAGATGA+AGG | + | chr7_4:51021691-51021710 | Msa1160900:three_prime_UTR | 35.0% |
| ! | ATTTTCTATGCTCTCAAGGA+GGG | - | chr7_4:51021771-51021790 | None:intergenic | 35.0% |
| ! | TATTTTCTATGCTCTCAAGG+AGG | - | chr7_4:51021772-51021791 | None:intergenic | 35.0% |
| ! | GAAACATCGATTATTTCCCA+AGG | + | chr7_4:51021858-51021877 | Msa1160900:three_prime_UTR | 35.0% |
| ATAGAAATCCCAATCGTTTC+TGG | + | chr7_4:51021991-51022010 | Msa1160900:three_prime_UTR | 35.0% | |
| TAAGATGTCCAGAAACGATT+GGG | - | chr7_4:51022002-51022021 | None:intergenic | 35.0% | |
| GAATTTACACAAGCTCATTG+AGG | - | chr7_4:51022101-51022120 | None:intergenic | 35.0% | |
| !! | TATTCTGGGGTATCCCATTT+AGG | - | chr7_4:51018814-51018833 | None:intergenic | 40.0% |
| TTGGGATTGAAGATGAAGTC+AGG | + | chr7_4:51019097-51019116 | Msa1160900:intron | 40.0% | |
| TGGGATTGAAGATGAAGTCA+GGG | + | chr7_4:51019098-51019117 | Msa1160900:intron | 40.0% | |
| AAGCAGCAACAACAATTGCA+TGG | - | chr7_4:51019186-51019205 | None:intergenic | 40.0% | |
| ! | TCTGTGCCTGATGATGATAA+TGG | + | chr7_4:51019307-51019326 | Msa1160900:CDS | 40.0% |
| CAAGAGAAGTTCTGTTAGAG+AGG | + | chr7_4:51019342-51019361 | Msa1160900:CDS | 40.0% | |
| GATTGCAGTAGGGAAGAAAA+TGG | + | chr7_4:51019388-51019407 | Msa1160900:CDS | 40.0% | |
| TAGGGAAGAAAATGGAGTGA+TGG | + | chr7_4:51019396-51019415 | Msa1160900:CDS | 40.0% | |
| TCTCAATAACCGTGAAGATG+AGG | + | chr7_4:51019525-51019544 | Msa1160900:CDS | 40.0% | |
| !! | ATCTTTCTTTGTCGCTTTGG+GGG | + | chr7_4:51019843-51019862 | Msa1160900:intron | 40.0% |
| ! | TCTAAGAAAGCATGGATCGA+AGG | + | chr7_4:51019971-51019990 | Msa1160900:CDS | 40.0% |
| TGTTTCTTGTCTGCGAATTG+TGG | + | chr7_4:51020052-51020071 | Msa1160900:intron | 40.0% | |
| !! | ACAGATGGATTTCTGGAATC+CGG | - | chr7_4:51020555-51020574 | None:intergenic | 40.0% |
| AATGAAGAAGAGGAAGAAGG+AGG | + | chr7_4:51020582-51020601 | Msa1160900:CDS | 40.0% | |
| GAGTTCAATTGTACCAGTTG+GGG | - | chr7_4:51020649-51020668 | None:intergenic | 40.0% | |
| GAGAGTTCAATTGTACCAGT+TGG | - | chr7_4:51020651-51020670 | None:intergenic | 40.0% | |
| TGGTACAATTGAACTCTCAC+AGG | + | chr7_4:51020653-51020672 | Msa1160900:CDS | 40.0% | |
| GACGATGTAAAGTTCTTCGA+TGG | + | chr7_4:51020774-51020793 | Msa1160900:intron | 40.0% | |
| TGTAAAGTTCTTCGATGGCA+TGG | + | chr7_4:51020779-51020798 | Msa1160900:intron | 40.0% | |
| ! | CTACCTAGCTTTCGTTGTTA+CGG | + | chr7_4:51020845-51020864 | Msa1160900:intron | 40.0% |
| TTGTCACGGTTCTTGTTGAA+TGG | - | chr7_4:51020949-51020968 | None:intergenic | 40.0% | |
| TTCAACAAGAACCGTGACAA+CGG | + | chr7_4:51020949-51020968 | Msa1160900:CDS | 40.0% | |
| TCAGCACATGAAGAAAAACG+AGG | + | chr7_4:51021062-51021081 | Msa1160900:CDS | 40.0% | |
| !! | TCAGCAGCCATTGGTTTATT+AGG | - | chr7_4:51021099-51021118 | None:intergenic | 40.0% |
| ! | GTACTGTTTTCGATTTTCGG+AGG | - | chr7_4:51021186-51021205 | None:intergenic | 40.0% |
| AAAACAGTACTGTCCCTAAG+AGG | + | chr7_4:51021196-51021215 | Msa1160900:CDS | 40.0% | |
| TTGTATTGTCCTTTGCCTCT+TGG | - | chr7_4:51021535-51021554 | None:intergenic | 40.0% | |
| CGGAATACACATTTCAAACC+CGG | + | chr7_4:51021597-51021616 | Msa1160900:CDS | 40.0% | |
| TCAAACCCGGAAATCACAAT+CGG | + | chr7_4:51021610-51021629 | Msa1160900:CDS | 40.0% | |
| ! | TTTTCTATGCTCTCAAGGAG+GGG | - | chr7_4:51021770-51021789 | None:intergenic | 40.0% |
| GTAAGATGTCCAGAAACGAT+TGG | - | chr7_4:51022003-51022022 | None:intergenic | 40.0% | |
| AAGATGAAGTCAGGGTCACT+TGG | + | chr7_4:51019106-51019125 | Msa1160900:intron | 45.0% | |
| ! | TGCTGCTTCTGATTGTCCAA+AGG | + | chr7_4:51019198-51019217 | Msa1160900:CDS | 45.0% |
| !!! | AACTTGCTGCTGAGGTTTTG+AGG | + | chr7_4:51019491-51019510 | Msa1160900:CDS | 45.0% |
| CATGTTGCTACAGTCTGACT+CGG | + | chr7_4:51019750-51019769 | Msa1160900:intron | 45.0% | |
| ACTCTCTGTCGATCTTCTGA+AGG | + | chr7_4:51019810-51019829 | Msa1160900:CDS | 45.0% | |
| GCAGTCAACTGAGATTGGAA+AGG | + | chr7_4:51019938-51019957 | Msa1160900:intron | 45.0% | |
| TGAGAGTTCGTGCTAGTTGA+CGG | - | chr7_4:51020001-51020020 | None:intergenic | 45.0% | |
| ! | TTCTAGTGGATGGAAAGAGC+TGG | + | chr7_4:51020357-51020376 | Msa1160900:intron | 45.0% |
| AAGAAAGCCCCTTCATCCAA+AGG | - | chr7_4:51020621-51020640 | None:intergenic | 45.0% | |
| TTCGATGGCATGGATGATGA+TGG | + | chr7_4:51020789-51020808 | Msa1160900:CDS | 45.0% | |
| GAACCGTAACAACGAAAGCT+AGG | - | chr7_4:51020851-51020870 | None:intergenic | 45.0% | |
| ! | TTAGTTTGAGAGCCAAGAGC+TGG | - | chr7_4:51020982-51021001 | None:intergenic | 45.0% |
| ! | AGCTCTTGGCTCTCAAACTA+AGG | + | chr7_4:51020981-51021000 | Msa1160900:CDS | 45.0% |
| GCTCTCAAACTAAGGACAAG+AGG | + | chr7_4:51020989-51021008 | Msa1160900:CDS | 45.0% | |
| ! | ACGGCTGTTTCATTAGATGC+CGG | - | chr7_4:51021021-51021040 | None:intergenic | 45.0% |
| CATGAAGAAAAACGAGGCTG+CGG | + | chr7_4:51021068-51021087 | Msa1160900:CDS | 45.0% | |
| GGTGAGGCCTAATAAACCAA+TGG | + | chr7_4:51021089-51021108 | Msa1160900:CDS | 45.0% | |
| AAACCAATGGCTGCTGATAC+TGG | + | chr7_4:51021102-51021121 | Msa1160900:CDS | 45.0% | |
| ! | CGCTGAATGTTCGAGTTTAG+CGG | - | chr7_4:51021138-51021157 | None:intergenic | 45.0% |
| CATTCAGCGAAAAGCCAATG+TGG | + | chr7_4:51021149-51021168 | Msa1160900:CDS | 45.0% | |
| !!! | TCGATTTTCGGAGGCATCTT+CGG | - | chr7_4:51021177-51021196 | None:intergenic | 45.0% |
| !! | ACATCTTGCTGAGCATTGAG+AGG | - | chr7_4:51021222-51021241 | None:intergenic | 45.0% |
| CTAAGCTTGAAGCCACTAAG+CGG | + | chr7_4:51021345-51021364 | Msa1160900:CDS | 45.0% | |
| TAATTGCAGCCAAGAGGCAA+AGG | + | chr7_4:51021523-51021542 | Msa1160900:intron | 45.0% | |
| ! | CATTGCCGATTGTGATTTCC+GGG | - | chr7_4:51021618-51021637 | None:intergenic | 45.0% |
| ! | CCATTGCCGATTGTGATTTC+CGG | - | chr7_4:51021619-51021638 | None:intergenic | 45.0% |
| CGGAAATCACAATCGGCAAT+GGG | + | chr7_4:51021617-51021636 | Msa1160900:CDS | 45.0% | |
| GGAAATCACAATCGGCAATG+GGG | + | chr7_4:51021618-51021637 | Msa1160900:CDS | 45.0% | |
| TTTCTATGCTCTCAAGGAGG+GGG | - | chr7_4:51021769-51021788 | None:intergenic | 45.0% | |
| GATCCTATCTTGGAGTTCCA+TGG | + | chr7_4:51021938-51021957 | Msa1160900:three_prime_UTR | 45.0% | |
| AAGCCATGGAACTCCAAGAT+AGG | - | chr7_4:51021944-51021963 | None:intergenic | 45.0% | |
| TTGGAGTTCCATGGCTTACT+TGG | + | chr7_4:51021947-51021966 | Msa1160900:three_prime_UTR | 45.0% | |
| GGAACAATCCAAGTAAGCCA+TGG | - | chr7_4:51021958-51021977 | None:intergenic | 45.0% | |
| ! | TCGTTGTAAGGGGTGTGAGA+AGG | + | chr7_4:51019276-51019295 | Msa1160900:CDS | 50.0% |
| TGCTAGCAAAGAGAGCAAGG+TGG | + | chr7_4:51019366-51019385 | Msa1160900:CDS | 50.0% | |
| !! | AGAGCAAGGTGGATTGCAGT+AGG | + | chr7_4:51019377-51019396 | Msa1160900:CDS | 50.0% |
| !! | GAGCAAGGTGGATTGCAGTA+GGG | + | chr7_4:51019378-51019397 | Msa1160900:CDS | 50.0% |
| !! | GCAATCACAACTTGCTGCTG+AGG | + | chr7_4:51019483-51019502 | Msa1160900:CDS | 50.0% |
| ! | TGCTGTTTGAGTCTCTGAGG+AGG | + | chr7_4:51019773-51019792 | Msa1160900:CDS | 50.0% |
| GAAAGAGCTGGTCAATGCCT+GGG | + | chr7_4:51020369-51020388 | Msa1160900:CDS | 50.0% | |
| AATTCTACCTGCGACAGGTG+TGG | - | chr7_4:51020410-51020429 | None:intergenic | 50.0% | |
| ! | AGCTTCAGAAGAAGGCACAC+CGG | + | chr7_4:51020533-51020552 | Msa1160900:intron | 50.0% |
| CTTCATCCAAAGGAGGTGAC+GGG | - | chr7_4:51020611-51020630 | None:intergenic | 50.0% | |
| CCTTCATCCAAAGGAGGTGA+CGG | - | chr7_4:51020612-51020631 | None:intergenic | 50.0% | |
| CGTCACCTCCTTTGGATGAA+GGG | + | chr7_4:51020610-51020629 | Msa1160900:CDS | 50.0% | |
| GTCACCTCCTTTGGATGAAG+GGG | + | chr7_4:51020611-51020630 | Msa1160900:CDS | 50.0% | |
| AAAGCCCCTTCATCCAAAGG+AGG | - | chr7_4:51020618-51020637 | None:intergenic | 50.0% | |
| GCTTTCTTTGTTGCCCCAAC+TGG | + | chr7_4:51020633-51020652 | Msa1160900:CDS | 50.0% | |
| ! | CTGGCTTTCTTCCGTTGTCA+CGG | - | chr7_4:51020963-51020982 | None:intergenic | 50.0% |
| AACGGAAGAAAGCCAGCTCT+TGG | + | chr7_4:51020967-51020986 | Msa1160900:CDS | 50.0% | |
| ! | CTTGTTGTCCTTGGCAGTGA+CGG | - | chr7_4:51021040-51021059 | None:intergenic | 50.0% |
| !! | GTGCTGACTCTTGTTGTCCT+TGG | - | chr7_4:51021049-51021068 | None:intergenic | 50.0% |
| !! | GAGCATTGAGAGGCCTCTTA+GGG | - | chr7_4:51021212-51021231 | None:intergenic | 50.0% |
| !! | TGAGCATTGAGAGGCCTCTT+AGG | - | chr7_4:51021213-51021232 | None:intergenic | 50.0% |
| CTCTTGAAGTCTCCGCTTAG+TGG | - | chr7_4:51021360-51021379 | None:intergenic | 50.0% | |
| CAAAGCAAGGGTCTGTCCAA+CGG | + | chr7_4:51021577-51021596 | Msa1160900:CDS | 50.0% | |
| CCGGAAATCACAATCGGCAA+TGG | + | chr7_4:51021616-51021635 | Msa1160900:CDS | 50.0% | |
| TTCTATGCTCTCAAGGAGGG+GGG | - | chr7_4:51021768-51021787 | None:intergenic | 50.0% | |
| AGTCAGGGTCACTTGGTCAG+TGG | + | chr7_4:51019113-51019132 | Msa1160900:CDS | 55.0% | |
| GGGTGCTAGCAAAGAGAGCA+AGG | + | chr7_4:51019363-51019382 | Msa1160900:CDS | 55.0% | |
| !! | CGGTGCTGTTTGAGTCTCTG+AGG | + | chr7_4:51019770-51019789 | Msa1160900:CDS | 55.0% |
| GGAAAGAGCTGGTCAATGCC+TGG | + | chr7_4:51020368-51020387 | Msa1160900:CDS | 55.0% | |
| TCAACAACCACACCTGTCGC+AGG | + | chr7_4:51020400-51020419 | Msa1160900:CDS | 55.0% | |
| CCGTCACCTCCTTTGGATGA+AGG | + | chr7_4:51020609-51020628 | Msa1160900:CDS | 55.0% | |
| TGAAACAGCCGTCACTGCCA+AGG | + | chr7_4:51021029-51021048 | Msa1160900:CDS | 55.0% | |
| AGAAAAACGAGGCTGCGGTG+AGG | + | chr7_4:51021073-51021092 | Msa1160900:CDS | 55.0% | |
| TCGAGTTTAGCGGCCTTGCA+CGG | - | chr7_4:51021128-51021147 | None:intergenic | 55.0% | |
| AGGCATCTTCGGCTCCACAT+TGG | - | chr7_4:51021166-51021185 | None:intergenic | 55.0% | |
| CGTTGGACAGACCCTTGCTT+TGG | - | chr7_4:51021579-51021598 | None:intergenic | 55.0% | |
| CACAATCGGCAATGGGGCAA+CGG | + | chr7_4:51021624-51021643 | Msa1160900:CDS | 55.0% | |
| CAGGGTCACTTGGTCAGTGG+AGG | + | chr7_4:51019116-51019135 | Msa1160900:CDS | 60.0% | |
| GCTGGTCAATGCCTGGGTGA+AGG | + | chr7_4:51020375-51020394 | Msa1160900:CDS | 60.0% | |
| GGTTGTTGACGCCTTCACCC+AGG | - | chr7_4:51020389-51020408 | None:intergenic | 60.0% | |
| AGGACTCCCGTCACCTCCTT+TGG | + | chr7_4:51020602-51020621 | Msa1160900:CDS | 60.0% | |
| CGGCCAGTATCAGCAGCCAT+TGG | - | chr7_4:51021108-51021127 | None:intergenic | 60.0% | |
| CTGCTGATACTGGCCGTGCA+AGG | + | chr7_4:51021112-51021131 | Msa1160900:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 51018559 | 51022205 | 51018559 | ID=Msa1160900;Name=Msa1160900 |
| chr7_4 | mRNA | 51018559 | 51022205 | 51018559 | ID=Msa1160900-mRNA-1;Parent=Msa1160900;Name=Msa1160900-mRNA-1;_AED=0.17;_eAED=0.17;_QI=134|1|1|1|0.9|0.81|11|549|447 |
| chr7_4 | exon | 51018559 | 51018650 | 51018559 | ID=Msa1160900-mRNA-1:exon:14338;Parent=Msa1160900-mRNA-1 |
| chr7_4 | exon | 51018956 | 51019006 | 51018956 | ID=Msa1160900-mRNA-1:exon:14339;Parent=Msa1160900-mRNA-1 |
| chr7_4 | exon | 51019109 | 51019546 | 51019109 | ID=Msa1160900-mRNA-1:exon:14340;Parent=Msa1160900-mRNA-1 |
| chr7_4 | exon | 51019763 | 51019831 | 51019763 | ID=Msa1160900-mRNA-1:exon:14341;Parent=Msa1160900-mRNA-1 |
| chr7_4 | exon | 51019942 | 51020024 | 51019942 | ID=Msa1160900-mRNA-1:exon:14342;Parent=Msa1160900-mRNA-1 |
| chr7_4 | exon | 51020363 | 51020421 | 51020363 | ID=Msa1160900-mRNA-1:exon:14343;Parent=Msa1160900-mRNA-1 |
| chr7_4 | exon | 51020535 | 51020674 | 51020535 | ID=Msa1160900-mRNA-1:exon:14344;Parent=Msa1160900-mRNA-1 |
| chr7_4 | exon | 51020786 | 51020813 | 51020786 | ID=Msa1160900-mRNA-1:exon:14345;Parent=Msa1160900-mRNA-1 |
| chr7_4 | exon | 51020929 | 51021239 | 51020929 | ID=Msa1160900-mRNA-1:exon:14346;Parent=Msa1160900-mRNA-1 |
| chr7_4 | exon | 51021320 | 51021401 | 51021320 | ID=Msa1160900-mRNA-1:exon:14347;Parent=Msa1160900-mRNA-1 |
| chr7_4 | exon | 51021532 | 51022205 | 51021532 | ID=Msa1160900-mRNA-1:exon:14348;Parent=Msa1160900-mRNA-1 |
| chr7_4 | five_prime_UTR | 51018559 | 51018650 | 51018559 | ID=Msa1160900-mRNA-1:five_prime_utr;Parent=Msa1160900-mRNA-1 |
| chr7_4 | five_prime_UTR | 51018956 | 51018997 | 51018956 | ID=Msa1160900-mRNA-1:five_prime_utr;Parent=Msa1160900-mRNA-1 |
| chr7_4 | CDS | 51018998 | 51019006 | 51018998 | ID=Msa1160900-mRNA-1:cds;Parent=Msa1160900-mRNA-1 |
| chr7_4 | CDS | 51019109 | 51019546 | 51019109 | ID=Msa1160900-mRNA-1:cds;Parent=Msa1160900-mRNA-1 |
| chr7_4 | CDS | 51019763 | 51019831 | 51019763 | ID=Msa1160900-mRNA-1:cds;Parent=Msa1160900-mRNA-1 |
| chr7_4 | CDS | 51019942 | 51020024 | 51019942 | ID=Msa1160900-mRNA-1:cds;Parent=Msa1160900-mRNA-1 |
| chr7_4 | CDS | 51020363 | 51020421 | 51020363 | ID=Msa1160900-mRNA-1:cds;Parent=Msa1160900-mRNA-1 |
| chr7_4 | CDS | 51020535 | 51020674 | 51020535 | ID=Msa1160900-mRNA-1:cds;Parent=Msa1160900-mRNA-1 |
| chr7_4 | CDS | 51020786 | 51020813 | 51020786 | ID=Msa1160900-mRNA-1:cds;Parent=Msa1160900-mRNA-1 |
| chr7_4 | CDS | 51020929 | 51021239 | 51020929 | ID=Msa1160900-mRNA-1:cds;Parent=Msa1160900-mRNA-1 |
| chr7_4 | CDS | 51021320 | 51021401 | 51021320 | ID=Msa1160900-mRNA-1:cds;Parent=Msa1160900-mRNA-1 |
| chr7_4 | CDS | 51021532 | 51021656 | 51021532 | ID=Msa1160900-mRNA-1:cds;Parent=Msa1160900-mRNA-1 |
| chr7_4 | three_prime_UTR | 51021657 | 51022205 | 51021657 | ID=Msa1160900-mRNA-1:three_prime_utr;Parent=Msa1160900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
