Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1161640 | XP_003624830.2 | 74.638 | 276 | 12 | 4 | 1 | 219 | 1 | 275 | 1.01e-127 | 372 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1161640 | sp|Q9SJW0|PHL7_ARATH | 36.863 | 255 | 73 | 8 | 27 | 210 | 3 | 240 | 5.13e-31 | 118 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1161640 | G7L3R4 | 74.638 | 276 | 12 | 4 | 1 | 219 | 1 | 275 | 4.83e-128 | 372 |
Gene ID | Type | Classification |
---|---|---|
Msa1161640 | TF | GARP-G2-like |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1161640 | MtrunA17_Chr7g0254981 | 73.571 | 280 | 12 | 4 | 1 | 219 | 1 | 279 | 6.17e-131 | 370 |
Msa1161640 | MtrunA17_Chr2g0291021 | 39.594 | 197 | 42 | 5 | 1 | 129 | 1 | 188 | 2.58e-32 | 119 |
Msa1161640 | MtrunA17_Chr5g0409731 | 78.431 | 51 | 11 | 0 | 48 | 98 | 25 | 75 | 1.78e-24 | 98.2 |
Msa1161640 | MtrunA17_Chr2g0310011 | 76.471 | 51 | 12 | 0 | 48 | 98 | 35 | 85 | 2.01e-22 | 93.6 |
Msa1161640 | MtrunA17_Chr8g0356501 | 74.510 | 51 | 13 | 0 | 48 | 98 | 37 | 87 | 6.70e-22 | 92.0 |
Msa1161640 | MtrunA17_Chr1g0197171 | 72.549 | 51 | 14 | 0 | 48 | 98 | 44 | 94 | 2.24e-21 | 89.7 |
Msa1161640 | MtrunA17_Chr5g0417521 | 67.308 | 52 | 17 | 0 | 47 | 98 | 14 | 65 | 2.60e-21 | 90.5 |
Msa1161640 | MtrunA17_Chr6g0461641 | 67.308 | 52 | 17 | 0 | 47 | 98 | 41 | 92 | 3.66e-21 | 90.5 |
Msa1161640 | MtrunA17_Chr7g0261911 | 36.774 | 155 | 38 | 3 | 31 | 125 | 241 | 395 | 3.69e-21 | 90.9 |
Msa1161640 | MtrunA17_Chr4g0042451 | 67.308 | 52 | 17 | 0 | 47 | 98 | 16 | 67 | 8.42e-21 | 89.0 |
Msa1161640 | MtrunA17_Chr2g0290991 | 70.588 | 51 | 15 | 0 | 48 | 98 | 39 | 89 | 1.08e-20 | 88.2 |
Msa1161640 | MtrunA17_Chr2g0321461 | 65.385 | 52 | 18 | 0 | 47 | 98 | 44 | 95 | 2.95e-20 | 87.8 |
Msa1161640 | MtrunA17_Chr1g0175091 | 33.553 | 152 | 39 | 3 | 31 | 128 | 249 | 392 | 5.25e-19 | 84.7 |
Msa1161640 | MtrunA17_Chr1g0190301 | 67.308 | 52 | 17 | 0 | 47 | 98 | 174 | 225 | 8.55e-19 | 84.0 |
Msa1161640 | MtrunA17_Chr7g0258551 | 44.000 | 100 | 52 | 3 | 46 | 141 | 210 | 309 | 1.13e-18 | 83.6 |
Msa1161640 | MtrunA17_Chr7g0274471 | 50.000 | 80 | 37 | 1 | 48 | 124 | 218 | 297 | 2.37e-18 | 82.8 |
Msa1161640 | MtrunA17_Chr2g0288601 | 63.333 | 60 | 22 | 0 | 40 | 99 | 63 | 122 | 4.97e-18 | 77.0 |
Msa1161640 | MtrunA17_Chr7g0242521 | 51.389 | 72 | 32 | 1 | 48 | 116 | 13 | 84 | 5.10e-17 | 77.0 |
Msa1161640 | MtrunA17_Chr7g0243081 | 43.820 | 89 | 41 | 1 | 22 | 101 | 36 | 124 | 7.18e-17 | 78.2 |
Msa1161640 | MtrunA17_Chr1g0175071 | 57.407 | 54 | 23 | 0 | 45 | 98 | 174 | 227 | 1.27e-16 | 77.0 |
Msa1161640 | MtrunA17_Chr8g0379121 | 43.617 | 94 | 48 | 2 | 50 | 140 | 113 | 204 | 6.27e-16 | 75.9 |
Msa1161640 | MtrunA17_Chr1g0175081 | 44.776 | 67 | 36 | 1 | 50 | 115 | 24 | 90 | 8.00e-16 | 70.5 |
Msa1161640 | MtrunA17_Chr6g0479431 | 58.182 | 55 | 23 | 0 | 50 | 104 | 204 | 258 | 1.11e-15 | 74.7 |
Msa1161640 | MtrunA17_Chr8g0366281 | 55.357 | 56 | 25 | 0 | 50 | 105 | 175 | 230 | 4.94e-15 | 72.8 |
Msa1161640 | MtrunA17_Chr1g0210911 | 53.968 | 63 | 29 | 0 | 50 | 112 | 24 | 86 | 6.10e-15 | 72.4 |
Msa1161640 | MtrunA17_Chr2g0320231 | 63.462 | 52 | 19 | 0 | 50 | 101 | 99 | 150 | 6.55e-15 | 72.8 |
Msa1161640 | MtrunA17_Chr3g0109981 | 58.182 | 55 | 23 | 0 | 50 | 104 | 276 | 330 | 1.60e-14 | 72.0 |
Msa1161640 | MtrunA17_Chr1g0162931 | 60.000 | 55 | 22 | 0 | 50 | 104 | 20 | 74 | 2.35e-14 | 70.5 |
Msa1161640 | MtrunA17_Chr3g0095611 | 43.056 | 72 | 41 | 0 | 33 | 104 | 4 | 75 | 2.78e-14 | 68.9 |
Msa1161640 | MtrunA17_Chr5g0410741 | 56.364 | 55 | 24 | 0 | 50 | 104 | 221 | 275 | 3.09e-14 | 70.9 |
Msa1161640 | MtrunA17_Chr2g0283951 | 59.259 | 54 | 22 | 0 | 50 | 103 | 91 | 144 | 3.75e-14 | 70.5 |
Msa1161640 | MtrunA17_Chr1g0154261 | 54.545 | 55 | 25 | 0 | 50 | 104 | 128 | 182 | 5.65e-14 | 69.3 |
Msa1161640 | MtrunA17_Chr7g0258531 | 38.776 | 98 | 50 | 2 | 48 | 136 | 213 | 309 | 1.01e-12 | 66.2 |
Msa1161640 | MtrunA17_Chr1g0198601 | 58.824 | 51 | 21 | 0 | 48 | 98 | 211 | 261 | 1.22e-11 | 63.2 |
Msa1161640 | MtrunA17_Chr4g0009991 | 35.185 | 108 | 59 | 3 | 2 | 99 | 11 | 117 | 1.49e-11 | 59.7 |
Msa1161640 | MtrunA17_Chr5g0402631 | 42.000 | 100 | 44 | 3 | 48 | 147 | 214 | 299 | 2.03e-11 | 62.4 |
Msa1161640 | MtrunA17_Chr4g0009901 | 47.458 | 59 | 30 | 1 | 40 | 98 | 160 | 217 | 2.49e-11 | 61.6 |
Msa1161640 | MtrunA17_Chr4g0045361 | 41.772 | 79 | 46 | 0 | 40 | 118 | 266 | 344 | 3.47e-11 | 62.0 |
Msa1161640 | MtrunA17_Chr4g0009981 | 52.830 | 53 | 24 | 1 | 46 | 98 | 114 | 165 | 5.37e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1161640 | AT2G01060.1 | 36.863 | 255 | 73 | 8 | 27 | 210 | 3 | 240 | 5.21e-32 | 118 |
Msa1161640 | AT4G13640.1 | 76.471 | 51 | 12 | 0 | 48 | 98 | 37 | 87 | 1.01e-23 | 96.3 |
Msa1161640 | AT4G13640.2 | 76.471 | 51 | 12 | 0 | 48 | 98 | 37 | 87 | 1.11e-23 | 96.3 |
Msa1161640 | AT3G24120.1 | 74.510 | 51 | 13 | 0 | 48 | 98 | 41 | 91 | 4.55e-23 | 94.7 |
Msa1161640 | AT3G24120.2 | 74.510 | 51 | 13 | 0 | 48 | 98 | 41 | 91 | 5.02e-23 | 94.7 |
Msa1161640 | AT3G12730.1 | 72.549 | 51 | 14 | 0 | 48 | 98 | 23 | 73 | 1.22e-22 | 92.4 |
Msa1161640 | AT1G79430.2 | 40.458 | 131 | 19 | 2 | 48 | 119 | 34 | 164 | 1.64e-22 | 94.4 |
Msa1161640 | AT3G04450.1 | 34.010 | 197 | 57 | 5 | 42 | 171 | 231 | 421 | 2.48e-22 | 94.7 |
Msa1161640 | AT3G04450.4 | 34.010 | 197 | 57 | 5 | 42 | 171 | 191 | 381 | 2.53e-22 | 94.4 |
Msa1161640 | AT3G04450.2 | 34.010 | 197 | 57 | 5 | 42 | 171 | 191 | 381 | 2.53e-22 | 94.4 |
Msa1161640 | AT5G45580.2 | 58.667 | 75 | 23 | 2 | 27 | 98 | 4 | 73 | 8.80e-22 | 90.9 |
Msa1161640 | AT5G45580.1 | 72.549 | 51 | 14 | 0 | 48 | 98 | 7 | 57 | 1.10e-21 | 90.5 |
Msa1161640 | AT4G28610.1 | 40.000 | 135 | 24 | 2 | 44 | 121 | 221 | 355 | 1.23e-21 | 92.4 |
Msa1161640 | AT3G04030.1 | 65.385 | 52 | 18 | 0 | 47 | 98 | 44 | 95 | 6.37e-21 | 90.1 |
Msa1161640 | AT5G29000.1 | 34.641 | 153 | 41 | 2 | 38 | 131 | 178 | 330 | 6.37e-21 | 90.1 |
Msa1161640 | AT5G29000.3 | 34.641 | 153 | 41 | 2 | 38 | 131 | 178 | 330 | 6.37e-21 | 90.1 |
Msa1161640 | AT5G29000.2 | 35.616 | 146 | 35 | 2 | 38 | 124 | 221 | 366 | 6.47e-21 | 90.5 |
Msa1161640 | AT3G04030.3 | 65.385 | 52 | 18 | 0 | 47 | 98 | 44 | 95 | 7.29e-21 | 90.1 |
Msa1161640 | AT1G69580.1 | 63.462 | 52 | 19 | 0 | 47 | 98 | 33 | 84 | 8.74e-21 | 89.4 |
Msa1161640 | AT1G69580.2 | 63.462 | 52 | 19 | 0 | 47 | 98 | 33 | 84 | 1.01e-20 | 89.0 |
Msa1161640 | AT5G18240.2 | 67.308 | 52 | 17 | 0 | 47 | 98 | 44 | 95 | 1.33e-20 | 89.4 |
Msa1161640 | AT5G18240.3 | 67.308 | 52 | 17 | 0 | 47 | 98 | 44 | 95 | 1.33e-20 | 89.4 |
Msa1161640 | AT5G18240.5 | 67.308 | 52 | 17 | 0 | 47 | 98 | 44 | 95 | 1.45e-20 | 89.4 |
Msa1161640 | AT5G18240.1 | 67.308 | 52 | 17 | 0 | 47 | 98 | 44 | 95 | 1.51e-20 | 89.4 |
Msa1161640 | AT5G18240.4 | 67.308 | 52 | 17 | 0 | 47 | 98 | 44 | 95 | 1.51e-20 | 89.4 |
Msa1161640 | AT3G13040.3 | 33.974 | 156 | 42 | 2 | 43 | 137 | 236 | 391 | 2.16e-20 | 89.0 |
Msa1161640 | AT3G13040.1 | 33.974 | 156 | 42 | 2 | 43 | 137 | 236 | 391 | 2.16e-20 | 89.0 |
Msa1161640 | AT3G13040.2 | 33.974 | 156 | 42 | 2 | 43 | 137 | 236 | 391 | 2.16e-20 | 89.0 |
Msa1161640 | AT5G29000.4 | 45.977 | 87 | 41 | 1 | 38 | 118 | 221 | 307 | 5.64e-20 | 86.7 |
Msa1161640 | AT3G04450.3 | 67.308 | 52 | 17 | 0 | 47 | 98 | 237 | 288 | 1.12e-19 | 85.9 |
Msa1161640 | AT4G04605.1 | 56.716 | 67 | 29 | 0 | 50 | 116 | 16 | 82 | 1.56e-18 | 81.3 |
Msa1161640 | AT3G04030.2 | 63.462 | 52 | 18 | 1 | 47 | 98 | 44 | 94 | 2.17e-18 | 83.2 |
Msa1161640 | AT5G06800.3 | 51.562 | 64 | 31 | 0 | 47 | 110 | 191 | 254 | 2.51e-17 | 79.0 |
Msa1161640 | AT2G20400.1 | 42.574 | 101 | 51 | 1 | 48 | 141 | 231 | 331 | 2.67e-17 | 80.1 |
Msa1161640 | AT5G06800.2 | 48.529 | 68 | 35 | 0 | 47 | 114 | 191 | 258 | 2.92e-17 | 79.7 |
Msa1161640 | AT5G06800.1 | 34.307 | 137 | 35 | 2 | 47 | 128 | 191 | 327 | 3.16e-17 | 79.7 |
Msa1161640 | AT2G02060.2 | 54.167 | 72 | 33 | 0 | 30 | 101 | 11 | 82 | 3.38e-17 | 78.2 |
Msa1161640 | AT2G02060.1 | 54.167 | 72 | 33 | 0 | 30 | 101 | 11 | 82 | 3.38e-17 | 78.2 |
Msa1161640 | AT2G06020.1 | 53.623 | 69 | 28 | 2 | 33 | 98 | 69 | 136 | 3.73e-17 | 79.0 |
Msa1161640 | AT2G20400.2 | 42.157 | 102 | 51 | 1 | 48 | 141 | 231 | 332 | 3.84e-17 | 79.7 |
Msa1161640 | AT2G42660.1 | 43.011 | 93 | 43 | 1 | 39 | 121 | 41 | 133 | 8.59e-17 | 77.0 |
Msa1161640 | AT2G40260.1 | 56.452 | 62 | 27 | 0 | 40 | 101 | 74 | 135 | 1.15e-16 | 78.2 |
Msa1161640 | AT2G38300.1 | 49.333 | 75 | 36 | 1 | 40 | 114 | 46 | 118 | 1.23e-15 | 75.1 |
Msa1161640 | AT1G14600.1 | 50.000 | 72 | 36 | 0 | 30 | 101 | 5 | 76 | 1.10e-14 | 71.2 |
Msa1161640 | AT5G42630.2 | 56.364 | 55 | 24 | 0 | 50 | 104 | 107 | 161 | 1.25e-14 | 70.5 |
Msa1161640 | AT5G16560.1 | 58.182 | 55 | 23 | 0 | 50 | 104 | 221 | 275 | 1.28e-14 | 72.4 |
Msa1161640 | AT5G42630.1 | 56.364 | 55 | 24 | 0 | 50 | 104 | 107 | 161 | 1.60e-14 | 71.2 |
Msa1161640 | AT1G32240.1 | 56.364 | 55 | 24 | 0 | 50 | 104 | 215 | 269 | 2.37e-14 | 71.6 |
Msa1161640 | AT1G32240.2 | 56.364 | 55 | 24 | 0 | 50 | 104 | 215 | 269 | 2.45e-14 | 71.2 |
Msa1161640 | AT4G17695.1 | 54.545 | 55 | 25 | 0 | 50 | 104 | 166 | 220 | 8.86e-14 | 69.7 |
Msa1161640 | AT4G04580.1 | 55.769 | 52 | 23 | 0 | 50 | 101 | 16 | 67 | 1.86e-13 | 66.2 |
Msa1161640 | AT3G25790.2 | 53.704 | 54 | 25 | 0 | 53 | 106 | 201 | 254 | 2.86e-12 | 64.7 |
Msa1161640 | AT1G13300.1 | 58.182 | 55 | 23 | 0 | 44 | 98 | 177 | 231 | 3.33e-12 | 65.1 |
Msa1161640 | AT4G37180.3 | 56.604 | 53 | 23 | 0 | 48 | 100 | 210 | 262 | 4.80e-12 | 64.3 |
Msa1161640 | AT1G25550.2 | 46.269 | 67 | 36 | 0 | 48 | 114 | 209 | 275 | 2.25e-11 | 62.4 |
Msa1161640 | AT1G49560.2 | 57.895 | 57 | 24 | 0 | 48 | 104 | 192 | 248 | 2.53e-11 | 62.0 |
Msa1161640 | AT4G37180.1 | 56.863 | 51 | 22 | 0 | 48 | 98 | 210 | 260 | 3.07e-11 | 62.4 |
Msa1161640 | AT4G37180.2 | 56.863 | 51 | 22 | 0 | 48 | 98 | 217 | 267 | 3.54e-11 | 62.4 |
Find 86 sgRNAs with CRISPR-Local
Find 396 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGCCCCTATCAGAGCCTTC+TGG | 0.281442 | 7_4:+51823459 | Msa1161640:CDS |
TCATGTTAAAAGCCATTTAC+AGG | 0.288705 | 7_4:+51822052 | Msa1161640:CDS |
AAGAATTAGTTTCTGTTTGT+AGG | 0.306362 | 7_4:+51823700 | Msa1161640:exon |
GGGTCTAGTGATGCCCTTGC+AGG | 0.311416 | 7_4:+51823480 | Msa1161640:CDS |
CACATATTGATACCTGTAAA+TGG | 0.320680 | 7_4:-51822064 | None:intergenic |
AAATTGAAGCATTCAGAATC+TGG | 0.331873 | 7_4:-51818812 | None:intergenic |
TGCTGGCTATGGATTTGATT+TGG | 0.345238 | 7_4:+51823641 | Msa1161640:CDS |
GTATCATGCAAAGAAGTTTC+CGG | 0.366560 | 7_4:+51819033 | Msa1161640:CDS |
GCATCGTCTTCATACAAGTT+TGG | 0.374272 | 7_4:-51823621 | None:intergenic |
GAGCAGTCTTTCTTGTAACT+TGG | 0.380002 | 7_4:-51823566 | None:intergenic |
TAGACCCAGAAGGCTCTGAT+AGG | 0.397855 | 7_4:-51823464 | None:intergenic |
TGATTGTGATGTTGGTCCTT+TGG | 0.405745 | 7_4:+51823596 | Msa1161640:CDS |
CTGAGAGTGATGGGTGTGCC+TGG | 0.409297 | 7_4:+51822017 | Msa1161640:CDS |
TTGTCATCATTTATTATGTT+CGG | 0.411164 | 7_4:+51823944 | Msa1161640:three_prime_UTR |
ATCACTCTCAGAACACCTTT+CGG | 0.429121 | 7_4:-51822005 | None:intergenic |
AGCAGTCTTTCTTGTAACTT+GGG | 0.448297 | 7_4:-51823565 | None:intergenic |
GTCGATGCTATTACGCAGCT+TGG | 0.451599 | 7_4:+51819214 | Msa1161640:CDS |
GTGAACAGTTTGCAAATGGT+GGG | 0.466595 | 7_4:+51819098 | Msa1161640:CDS |
TCTACATTAATATATACAAA+TGG | 0.467748 | 7_4:-51823796 | None:intergenic |
AAATCTCAAGGCGGTGGTGG+TGG | 0.477044 | 7_4:+51819076 | Msa1161640:CDS |
AGCCCCTATCAGAGCCTTCT+GGG | 0.481660 | 7_4:+51823460 | Msa1161640:CDS |
GCGTAATAGCATCGACAAAA+CGG | 0.482228 | 7_4:-51819207 | None:intergenic |
CTTCTGCAAGTATTTACCCT+GGG | 0.483213 | 7_4:-51823358 | None:intergenic |
GGTGAACAGTTTGCAAATGG+TGG | 0.483332 | 7_4:+51819097 | Msa1161640:CDS |
GTTCAACCTGCTGGAGGTGG+TGG | 0.495717 | 7_4:+51819148 | Msa1161640:CDS |
TATGAAGACGATGCTGGCTA+TGG | 0.503534 | 7_4:+51823630 | Msa1161640:CDS |
ATATATACAAATGGATTGCA+TGG | 0.506158 | 7_4:-51823787 | None:intergenic |
TGTAGCATCATCGTCTCCTC+CGG | 0.509828 | 7_4:-51819052 | None:intergenic |
AGACCCAGAAGGCTCTGATA+GGG | 0.512319 | 7_4:-51823463 | None:intergenic |
CAGAAGGCTCTGATAGGGGC+TGG | 0.517321 | 7_4:-51823458 | None:intergenic |
TGCTTCCCACCACCTCCAGC+AGG | 0.519989 | 7_4:-51819154 | None:intergenic |
GTGGGAAGCAGCGTTTGCGT+TGG | 0.522000 | 7_4:+51819167 | Msa1161640:CDS |
GATGCTATTACGCAGCTTGG+TGG | 0.523773 | 7_4:+51819217 | Msa1161640:CDS |
GTAATGAGATTGAGGATTAG+TGG | 0.525216 | 7_4:-51818717 | None:intergenic |
GAGAATTGATGAAGGTTCAA+AGG | 0.527042 | 7_4:+51823527 | Msa1161640:CDS |
AGGTAGTACCTTGGCAGCAT+CGG | 0.527216 | 7_4:+51823404 | Msa1161640:CDS |
CAGAAGAATGATTGTGATGT+TGG | 0.531947 | 7_4:+51823588 | Msa1161640:CDS |
ACAAATGAGAATTGAAGCCC+AGG | 0.536357 | 7_4:+51823341 | Msa1161640:CDS |
GAACAGTTTGCAAATGGTGG+GGG | 0.537010 | 7_4:+51819100 | Msa1161640:CDS |
CATAAATCTCAAGGCGGTGG+TGG | 0.541663 | 7_4:+51819073 | Msa1161640:CDS |
ATAGAGGAACAGCAGAAACT+AGG | 0.544970 | 7_4:+51823384 | Msa1161640:CDS |
ATTGATGAAGGTTCAAAGGA+TGG | 0.546371 | 7_4:+51823531 | Msa1161640:CDS |
TCAACTTGTGGTATATGACT+TGG | 0.549610 | 7_4:+51824038 | Msa1161640:three_prime_UTR |
TGATCTTTGTAGTCAACTTG+TGG | 0.554077 | 7_4:+51824026 | Msa1161640:three_prime_UTR |
TGAACAGTTTGCAAATGGTG+GGG | 0.557194 | 7_4:+51819099 | Msa1161640:CDS |
GGGAAAGTGTAATGAGATTG+AGG | 0.557969 | 7_4:-51818725 | None:intergenic |
AAGTGTTTCCGATGCTGCCA+AGG | 0.559809 | 7_4:-51823412 | None:intergenic |
GGTCATGGATGATGAATGTT+GGG | 0.560124 | 7_4:+51823907 | Msa1161640:three_prime_UTR |
TCATACAAGTTTGGATCCAA+AGG | 0.570266 | 7_4:-51823612 | None:intergenic |
ACATGATAAATGGTCAGTCC+AGG | 0.573039 | 7_4:-51822035 | None:intergenic |
GCAGCGTTTGCGTTGGACGT+CGG | 0.573253 | 7_4:+51819174 | Msa1161640:CDS |
CTTCTCTCCTGTCGTGAGAG+TGG | 0.573861 | 7_4:+51823831 | Msa1161640:three_prime_UTR |
GGTGTCGTTAACAATGGTGG+AGG | 0.575196 | 7_4:-51818578 | None:intergenic |
CTACATAAATCTCAAGGCGG+TGG | 0.580370 | 7_4:+51819070 | Msa1161640:CDS |
GGTGGTGAACAGTTTGCAAA+TGG | 0.580373 | 7_4:+51819094 | Msa1161640:CDS |
GTGTTTACCACTCTCACGAC+AGG | 0.581242 | 7_4:-51823838 | None:intergenic |
AACTTGTATGAAGACGATGC+TGG | 0.582842 | 7_4:+51823624 | Msa1161640:CDS |
TTGGAAGGTGTCGTTAACAA+TGG | 0.586188 | 7_4:-51818584 | None:intergenic |
ATGCATTGTACATGTGGTCA+TGG | 0.589120 | 7_4:+51823892 | Msa1161640:three_prime_UTR |
GACCCAGAAGGCTCTGATAG+GGG | 0.597299 | 7_4:-51823462 | None:intergenic |
TGGTCATGGATGATGAATGT+TGG | 0.601294 | 7_4:+51823906 | Msa1161640:three_prime_UTR |
ATGATAGGAGCAACACCGAA+AGG | 0.616255 | 7_4:+51821990 | Msa1161640:intron |
AATGTTCAACCTGCTGGAGG+TGG | 0.620630 | 7_4:+51819145 | Msa1161640:CDS |
GCTTGTCAATTAGCTAGTGA+CGG | 0.624838 | 7_4:+51823996 | Msa1161640:three_prime_UTR |
AAAGGTGTTCTGAGAGTGAT+GGG | 0.625965 | 7_4:+51822008 | Msa1161640:CDS |
ATGATGCTACATAAATCTCA+AGG | 0.630109 | 7_4:+51819064 | Msa1161640:CDS |
GAAGGTGTCGTTAACAATGG+TGG | 0.635488 | 7_4:-51818581 | None:intergenic |
TGACAAGCTTGATATTGACA+TGG | 0.637216 | 7_4:-51823981 | None:intergenic |
GAAAGGTGTTCTGAGAGTGA+TGG | 0.640082 | 7_4:+51822007 | Msa1161640:CDS |
TCTTCTGCAAGTATTTACCC+TGG | 0.641154 | 7_4:-51823359 | None:intergenic |
ATTTCTGTTGACTGAGAGTG+CGG | 0.642747 | 7_4:-51823861 | None:intergenic |
TTTCTGTTGACTGAGAGTGC+GGG | 0.644510 | 7_4:-51823860 | None:intergenic |
GCAGAAACTAGGTAGTACCT+TGG | 0.646490 | 7_4:+51823395 | Msa1161640:CDS |
CAAATGAGAATTGAAGCCCA+GGG | 0.650033 | 7_4:+51823342 | Msa1161640:CDS |
TTCAACCTGCTGGAGGTGGT+GGG | 0.656162 | 7_4:+51819149 | Msa1161640:CDS |
TGAGCGTTGAAATGAACGGA+CGG | 0.667016 | 7_4:-51818618 | None:intergenic |
ACGACACGTGACAAACGCGT+GGG | 0.675823 | 7_4:+51818553 | None:intergenic |
AGGGCATCACTAGACCCAGA+AGG | 0.683087 | 7_4:-51823474 | None:intergenic |
GTGTCGTTAACAATGGTGGA+GGG | 0.686422 | 7_4:-51818577 | None:intergenic |
AAAATGAGCGTTGAAATGAA+CGG | 0.689332 | 7_4:-51818622 | None:intergenic |
ATTGACATGCATTGTACATG+TGG | 0.698076 | 7_4:+51823886 | Msa1161640:three_prime_UTR |
ATACTTGCAGAAGATCATAG+AGG | 0.704943 | 7_4:+51823368 | Msa1161640:CDS |
TTGGAAACAGAAAATGACGA+CGG | 0.712157 | 7_4:+51823660 | Msa1161640:CDS |
TCATGCAAAGAAGTTTCCGG+AGG | 0.726416 | 7_4:+51819036 | Msa1161640:CDS |
GCGTTGAAATGAACGGACGG+CGG | 0.742103 | 7_4:-51818615 | None:intergenic |
ATGCTACATAAATCTCAAGG+CGG | 0.774912 | 7_4:+51819067 | Msa1161640:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAGAGTTTATAT+AGG | - | chr7_4:51821017-51821036 | None:intergenic | 10.0% |
!!! | CAAAATTTTGAATATTTATA+GGG | - | chr7_4:51821399-51821418 | None:intergenic | 10.0% |
!!! | ACAAAATTTTGAATATTTAT+AGG | - | chr7_4:51821400-51821419 | None:intergenic | 10.0% |
!!! | TGAATAATTTAAAGTTAAAA+AGG | - | chr7_4:51821971-51821990 | None:intergenic | 10.0% |
!!! | AATATTTTACTAATTTTACA+TGG | + | chr7_4:51822116-51822135 | Msa1161640:intron | 10.0% |
!! | AATATATAATTTACAAAAAC+AGG | - | chr7_4:51823767-51823786 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTTGTGATTG+AGG | - | chr7_4:51818671-51818690 | None:intergenic | 15.0% |
!! | GTTAGTGTATATTTATATTA+TGG | + | chr7_4:51819376-51819395 | Msa1161640:intron | 15.0% |
!!! | TCATTAGTTTAAAATGATAA+AGG | + | chr7_4:51819766-51819785 | Msa1161640:intron | 15.0% |
!!! | TCATTAGTTTAAAATGATAA+AGG | + | chr7_4:51819766-51819785 | Msa1161640:intron | 15.0% |
!!! | TAAGTGTGATTTTATTTTAT+AGG | + | chr7_4:51821586-51821605 | Msa1161640:intron | 15.0% |
!!! | AAGTGTGATTTTATTTTATA+GGG | + | chr7_4:51821587-51821606 | Msa1161640:intron | 15.0% |
!!! | ACCTTTTTTTAATATTTTAG+TGG | + | chr7_4:51821840-51821859 | Msa1161640:intron | 15.0% |
!! | TCCACTAAAATATTAAAAAA+AGG | - | chr7_4:51821844-51821863 | None:intergenic | 15.0% |
!!! | TTTTTTAATATTTTAGTGGA+TGG | + | chr7_4:51821844-51821863 | Msa1161640:intron | 15.0% |
!! | AACTTTAAATTATTCATGAT+AGG | + | chr7_4:51821975-51821994 | Msa1161640:intron | 15.0% |
!!! | TTGTTTTATTAAAATGTTAG+AGG | - | chr7_4:51822454-51822473 | None:intergenic | 15.0% |
!! | AAGAATTATATAAAAATTGC+AGG | - | chr7_4:51823057-51823076 | None:intergenic | 15.0% |
!!! | ATATAATTCTTTTAAATACG+TGG | + | chr7_4:51823066-51823085 | Msa1161640:intron | 15.0% |
!! | TCTACATTAATATATACAAA+TGG | - | chr7_4:51823799-51823818 | None:intergenic | 15.0% |
!! | AGTGTATATTTATATTATGG+TGG | + | chr7_4:51819379-51819398 | Msa1161640:intron | 20.0% |
!! | GTGTATATTTATATTATGGT+GGG | + | chr7_4:51819380-51819399 | Msa1161640:intron | 20.0% |
!! | ATGAAAAATGAAATGCTTTA+CGG | + | chr7_4:51819699-51819718 | Msa1161640:intron | 20.0% |
!! | ACATTAACTCTCATATTTAA+TGG | - | chr7_4:51820009-51820028 | None:intergenic | 20.0% |
!! | TTAAATATGAGAGTTAATGT+TGG | + | chr7_4:51820009-51820028 | Msa1161640:intron | 20.0% |
!! | ACTATTTACCTAATCATATA+AGG | - | chr7_4:51820095-51820114 | None:intergenic | 20.0% |
!!! | CTTTTTTGTACTTGTAATAT+GGG | + | chr7_4:51820116-51820135 | Msa1161640:intron | 20.0% |
!!! | TTTTTTGTACTTGTAATATG+GGG | + | chr7_4:51820117-51820136 | Msa1161640:intron | 20.0% |
!!! | AGAATTTAAAACATTAGTAG+TGG | - | chr7_4:51820180-51820199 | None:intergenic | 20.0% |
!!! | ATCTTTTGAGATAAAAACAA+GGG | + | chr7_4:51821356-51821375 | Msa1161640:intron | 20.0% |
!!! | AAAATTTCCATCAACATTTT+TGG | + | chr7_4:51821526-51821545 | Msa1161640:intron | 20.0% |
!! | ACAAAACTGTGAATATTTAT+AGG | + | chr7_4:51821617-51821636 | Msa1161640:intron | 20.0% |
!! | CAAAACTGTGAATATTTATA+GGG | + | chr7_4:51821618-51821637 | Msa1161640:intron | 20.0% |
!!! | CTTTCTCTTTATTGTTTTTA+GGG | - | chr7_4:51821661-51821680 | None:intergenic | 20.0% |
!!! | TCTTTCTCTTTATTGTTTTT+AGG | - | chr7_4:51821662-51821681 | None:intergenic | 20.0% |
!! | AAAAACAATAAAGAGAAAGA+TGG | + | chr7_4:51821662-51821681 | Msa1161640:intron | 20.0% |
!! | AGTAGTTAAGGAATAAAAAA+TGG | - | chr7_4:51821796-51821815 | None:intergenic | 20.0% |
!!! | ATTTAAAGTTAAAAAGGTCT+AGG | - | chr7_4:51821965-51821984 | None:intergenic | 20.0% |
!! | TACATGTAGTGATATATAAT+AGG | - | chr7_4:51822155-51822174 | None:intergenic | 20.0% |
!! | CTATGCTATTAGTATAAATA+AGG | + | chr7_4:51822570-51822589 | Msa1161640:intron | 20.0% |
!! | TTAATCATTGTTGAAGTTAT+GGG | - | chr7_4:51822694-51822713 | None:intergenic | 20.0% |
!! | TTTAATCATTGTTGAAGTTA+TGG | - | chr7_4:51822695-51822714 | None:intergenic | 20.0% |
!! | ATGATAAATAAAAGATGGTT+GGG | - | chr7_4:51822731-51822750 | None:intergenic | 20.0% |
!!! | AGAAACATTTGAAGTTTTTA+CGG | - | chr7_4:51822906-51822925 | None:intergenic | 20.0% |
!!! | TGTAGTTTCATCTAAAATAA+TGG | - | chr7_4:51822999-51823018 | None:intergenic | 20.0% |
!! | CTTATTTAATAGATAAGTGA+TGG | - | chr7_4:51823140-51823159 | None:intergenic | 20.0% |
!! | TATAATTCTTCATTATCAGA+AGG | - | chr7_4:51823163-51823182 | None:intergenic | 20.0% |
!!! | ATCAATTCTCTGTTTTTTAT+GGG | - | chr7_4:51823517-51823536 | None:intergenic | 20.0% |
!! | TTGTCATCATTTATTATGTT+CGG | + | chr7_4:51823944-51823963 | Msa1161640:three_prime_UTR | 20.0% |
!!! | AAATAGGGATTTGATTTTCT+CGG | - | chr7_4:51818749-51818768 | None:intergenic | 25.0% |
! | TTAAATTCATCCAAGTCAAA+TGG | - | chr7_4:51818895-51818914 | None:intergenic | 25.0% |
!!! | TTGTTGTGTTTTTTTTGTTG+TGG | + | chr7_4:51818990-51819009 | Msa1161640:intron | 25.0% |
!!! | AGATTAAGATGTGTTGTTTT+TGG | + | chr7_4:51819271-51819290 | Msa1161640:intron | 25.0% |
!!! | GTTTCTTTTTGATTGTGTTT+AGG | + | chr7_4:51819303-51819322 | Msa1161640:intron | 25.0% |
! | TGAAAAATGAAATGCTTTAC+GGG | + | chr7_4:51819700-51819719 | Msa1161640:intron | 25.0% |
! | GCATTAACTCTCATATTTAA+TGG | - | chr7_4:51820056-51820075 | None:intergenic | 25.0% |
! | GAATCATACCTTATATGATT+AGG | + | chr7_4:51820084-51820103 | Msa1161640:intron | 25.0% |
!!! | GCTTTTTTGTACTTGTAATA+TGG | + | chr7_4:51820115-51820134 | Msa1161640:intron | 25.0% |
! | ACAGAATATGTACTTTCATT+TGG | - | chr7_4:51820352-51820371 | None:intergenic | 25.0% |
!! | AAATGAAAGTACATATTCTG+TGG | + | chr7_4:51820351-51820370 | Msa1161640:intron | 25.0% |
!! | AGTTGATTAATTCTGTTTTG+TGG | + | chr7_4:51820742-51820761 | Msa1161640:intron | 25.0% |
!!! | TTTAGCTTTCAGTTTATGAA+AGG | + | chr7_4:51820956-51820975 | Msa1161640:intron | 25.0% |
!! | TTAGCTTTCAGTTTATGAAA+GGG | + | chr7_4:51820957-51820976 | Msa1161640:intron | 25.0% |
!!! | CTTTGTTTTAGTTGGTTTTT+AGG | + | chr7_4:51820988-51821007 | Msa1161640:intron | 25.0% |
! | GTTGCATTATTAATGAAATG+TGG | - | chr7_4:51821091-51821110 | None:intergenic | 25.0% |
! | GAATCAAAAAGAAAATCTAG+AGG | + | chr7_4:51821184-51821203 | Msa1161640:intron | 25.0% |
! | CTTCAAAGTCATTTCATATA+GGG | - | chr7_4:51821226-51821245 | None:intergenic | 25.0% |
! | ACTTCAAAGTCATTTCATAT+AGG | - | chr7_4:51821227-51821246 | None:intergenic | 25.0% |
!! | GTTTTTATCTCAAAAGATGA+GGG | - | chr7_4:51821354-51821373 | None:intergenic | 25.0% |
!!! | TGTTTTTATCTCAAAAGATG+AGG | - | chr7_4:51821355-51821374 | None:intergenic | 25.0% |
!!! | CATCTTTTGAGATAAAAACA+AGG | + | chr7_4:51821355-51821374 | Msa1161640:intron | 25.0% |
! | ACAAGGGTTAATTAAGTAAA+TGG | + | chr7_4:51821372-51821391 | Msa1161640:intron | 25.0% |
!!! | AAGTGCGATTTTATTTTGTA+GGG | - | chr7_4:51821430-51821449 | None:intergenic | 25.0% |
!!! | AAAGTGCGATTTTATTTTGT+AGG | - | chr7_4:51821431-51821450 | None:intergenic | 25.0% |
!! | TGCTGATGGAAAATTTTATA+GGG | - | chr7_4:51821459-51821478 | None:intergenic | 25.0% |
!! | ATGCTGATGGAAAATTTTAT+AGG | - | chr7_4:51821460-51821479 | None:intergenic | 25.0% |
!! | TGATATTTGTACAACCATTT+TGG | - | chr7_4:51821752-51821771 | None:intergenic | 25.0% |
! | ACTTGATGTATAATCATTGA+TGG | + | chr7_4:51821871-51821890 | Msa1161640:intron | 25.0% |
! | ATGTATAATCATTGATGGAA+GGG | + | chr7_4:51821876-51821895 | Msa1161640:intron | 25.0% |
!! | ATGGCTTTTAACATGATAAA+TGG | - | chr7_4:51822048-51822067 | None:intergenic | 25.0% |
!! | GACATTTCTCATAACTTTTT+AGG | - | chr7_4:51822258-51822277 | None:intergenic | 25.0% |
! | AAGGAGTTACAAATTATCTT+CGG | - | chr7_4:51822415-51822434 | None:intergenic | 25.0% |
! | TATTAAAATGTTAGAGGTAG+AGG | - | chr7_4:51822448-51822467 | None:intergenic | 25.0% |
! | TTTATACTAATAGCATAGCT+AGG | - | chr7_4:51822568-51822587 | None:intergenic | 25.0% |
! | TGCTATTAGTATAAATAAGG+AGG | + | chr7_4:51822573-51822592 | Msa1161640:intron | 25.0% |
! | ACTTCAACAATGATTAAACT+TGG | + | chr7_4:51822697-51822716 | Msa1161640:intron | 25.0% |
! | GATGATAAATAAAAGATGGT+TGG | - | chr7_4:51822732-51822751 | None:intergenic | 25.0% |
! | CACAGATGATAAATAAAAGA+TGG | - | chr7_4:51822736-51822755 | None:intergenic | 25.0% |
! | ATGGTTCAACTATTAATTTC+AGG | + | chr7_4:51822956-51822975 | Msa1161640:intron | 25.0% |
!!! | TTTCAGGTTAAATTTCTTCA+CGG | + | chr7_4:51822972-51822991 | Msa1161640:intron | 25.0% |
!!! | TCAATTCTCTGTTTTTTATG+GGG | - | chr7_4:51823516-51823535 | None:intergenic | 25.0% |
!!! | CATCAATTCTCTGTTTTTTA+TGG | - | chr7_4:51823518-51823537 | None:intergenic | 25.0% |
! | AAAAAACAGAGAATTGATGA+AGG | + | chr7_4:51823519-51823538 | Msa1161640:CDS | 25.0% |
!! | AAGAATTAGTTTCTGTTTGT+AGG | + | chr7_4:51823700-51823719 | Msa1161640:exon | 25.0% |
!!! | ATATATACAAATGGATTGCA+TGG | - | chr7_4:51823790-51823809 | None:intergenic | 25.0% |
!! | AAAATGAGCGTTGAAATGAA+CGG | - | chr7_4:51818625-51818644 | None:intergenic | 30.0% |
!! | AATAGGGATTTGATTTTCTC+GGG | - | chr7_4:51818748-51818767 | None:intergenic | 30.0% |
! | AAATTGAAGCATTCAGAATC+TGG | - | chr7_4:51818815-51818834 | None:intergenic | 30.0% |
AAGTCAAATGGAAAGTTTCT+AGG | - | chr7_4:51818883-51818902 | None:intergenic | 30.0% | |
TAGAAACTTTCCATTTGACT+TGG | + | chr7_4:51818882-51818901 | Msa1161640:intron | 30.0% | |
ATGATGCTACATAAATCTCA+AGG | + | chr7_4:51819064-51819083 | Msa1161640:CDS | 30.0% | |
!!! | GTGTTTAGGTTTTAGAAGTT+AGG | + | chr7_4:51819317-51819336 | Msa1161640:intron | 30.0% |
!!! | TTTAGGTTTTAGAAGTTAGG+AGG | + | chr7_4:51819320-51819339 | Msa1161640:intron | 30.0% |
AAGCTACAAAGTTTAACTGT+TGG | + | chr7_4:51819439-51819458 | Msa1161640:intron | 30.0% | |
CCTATGTTTAGTATCATTGT+GGG | - | chr7_4:51819498-51819517 | None:intergenic | 30.0% | |
ATAGGCTAAACCTTCTAAAT+TGG | + | chr7_4:51819513-51819532 | Msa1161640:intron | 30.0% | |
TAGGCTAAACCTTCTAAATT+GGG | + | chr7_4:51819514-51819533 | Msa1161640:intron | 30.0% | |
! | AAAAAGGGTTTAGACTTGTT+TGG | - | chr7_4:51819653-51819672 | None:intergenic | 30.0% |
TTGCTAGAACATGCTAAAAA+GGG | - | chr7_4:51819668-51819687 | None:intergenic | 30.0% | |
ATTGCTAGAACATGCTAAAA+AGG | - | chr7_4:51819669-51819688 | None:intergenic | 30.0% | |
AAATAAGTAATGCATGCGTA+AGG | + | chr7_4:51819742-51819761 | Msa1161640:intron | 30.0% | |
AATAAGTAATGCATGCGTAA+GGG | + | chr7_4:51819743-51819762 | Msa1161640:intron | 30.0% | |
AAATAAGTAATGCATGCGTA+AGG | + | chr7_4:51819742-51819761 | Msa1161640:intron | 30.0% | |
AATAAGTAATGCATGCGTAA+GGG | + | chr7_4:51819743-51819762 | Msa1161640:intron | 30.0% | |
!! | ATTTTGTTACTTGCATTCCA+AGG | + | chr7_4:51819918-51819937 | Msa1161640:intron | 30.0% |
ACGAATTGACAATACAATGT+TGG | + | chr7_4:51819953-51819972 | Msa1161640:intron | 30.0% | |
AATACAATGTTGGAGTGTAT+GGG | + | chr7_4:51819963-51819982 | Msa1161640:intron | 30.0% | |
GGAATCAAAAAGAAATTGCA+AGG | - | chr7_4:51820159-51820178 | None:intergenic | 30.0% | |
ATTCTAACAAGGACTAAAAC+TGG | - | chr7_4:51820204-51820223 | None:intergenic | 30.0% | |
!! | GTGGCTTTATTAATGAAATG+TGG | + | chr7_4:51820259-51820278 | Msa1161640:intron | 30.0% |
AATTTAGATATGGCGAACTA+GGG | - | chr7_4:51820378-51820397 | None:intergenic | 30.0% | |
CTGCGAATACAATTTAGATA+TGG | - | chr7_4:51820388-51820407 | None:intergenic | 30.0% | |
TACCTATTCCAGAATTTCTT+GGG | + | chr7_4:51820668-51820687 | Msa1161640:intron | 30.0% | |
! | TCTTTGCTCTTATTTAGAGA+TGG | + | chr7_4:51820849-51820868 | Msa1161640:intron | 30.0% |
ATGTTATGGAAGAAACTTGT+AGG | + | chr7_4:51820896-51820915 | Msa1161640:intron | 30.0% | |
GCAACATCAACATTTCTATA+AGG | + | chr7_4:51821106-51821125 | Msa1161640:intron | 30.0% | |
!!! | GTCATTACGAAGGTTTTAAA+TGG | - | chr7_4:51821275-51821294 | None:intergenic | 30.0% |
!! | GCTGATGGAAAAGTTTTATA+GGG | - | chr7_4:51821490-51821509 | None:intergenic | 30.0% |
!! | TGCTGATGGAAAAGTTTTAT+AGG | - | chr7_4:51821491-51821510 | None:intergenic | 30.0% |
!! | GTTGATGGAAATTTTTGACA+GGG | - | chr7_4:51821521-51821540 | None:intergenic | 30.0% |
!! | TGTTGATGGAAATTTTTGAC+AGG | - | chr7_4:51821522-51821541 | None:intergenic | 30.0% |
! | CATTTTCCTTGAGCATTTTA+GGG | - | chr7_4:51821553-51821572 | None:intergenic | 30.0% |
! | ACATTTTCCTTGAGCATTTT+AGG | - | chr7_4:51821554-51821573 | None:intergenic | 30.0% |
! | AACCATTTTGGACAACTTAT+GGG | - | chr7_4:51821740-51821759 | None:intergenic | 30.0% |
ATTCCTTAACTACTATTCTC+TGG | + | chr7_4:51821802-51821821 | Msa1161640:intron | 30.0% | |
TTCCTTAACTACTATTCTCT+GGG | + | chr7_4:51821803-51821822 | Msa1161640:intron | 30.0% | |
TAAAAAAAGGTTCTGCTAAC+TGG | - | chr7_4:51821831-51821850 | None:intergenic | 30.0% | |
GATGTATAATCATTGATGGA+AGG | + | chr7_4:51821875-51821894 | Msa1161640:intron | 30.0% | |
TGTATAATCATTGATGGAAG+GGG | + | chr7_4:51821877-51821896 | Msa1161640:intron | 30.0% | |
AGAAAAGGTAAGAAAAAGTG+TGG | - | chr7_4:51821903-51821922 | None:intergenic | 30.0% | |
GGTAAAAGCAAAAACAGAAA+AGG | - | chr7_4:51821918-51821937 | None:intergenic | 30.0% | |
TTAGCTAAACTATTGTCATC+AGG | - | chr7_4:51821939-51821958 | None:intergenic | 30.0% | |
TCATGTTAAAAGCCATTTAC+AGG | + | chr7_4:51822052-51822071 | Msa1161640:CDS | 30.0% | |
CACATATTGATACCTGTAAA+TGG | - | chr7_4:51822067-51822086 | None:intergenic | 30.0% | |
CATTTACAGGTATCAATATG+TGG | + | chr7_4:51822065-51822084 | Msa1161640:intron | 30.0% | |
! | CAGATTCTAAAGATGAGAAA+AGG | + | chr7_4:51822331-51822350 | Msa1161640:intron | 30.0% |
AAAGATGAGAAAAGGAATTC+TGG | + | chr7_4:51822339-51822358 | Msa1161640:intron | 30.0% | |
CAAGAGAAAAATGAAGACTA+TGG | - | chr7_4:51822664-51822683 | None:intergenic | 30.0% | |
TAACTGATTAAGCATCCATA+TGG | + | chr7_4:51822847-51822866 | Msa1161640:intron | 30.0% | |
AAGAGCGATCATTACATTAA+TGG | + | chr7_4:51822937-51822956 | Msa1161640:intron | 30.0% | |
! | AATTAGCTTCTAATTTGCCT+CGG | + | chr7_4:51823182-51823201 | Msa1161640:intron | 30.0% |
ATATCAAGGAAGTAAATGCA+CGG | - | chr7_4:51823302-51823321 | None:intergenic | 30.0% | |
ATTTACTTCCTTGATATTCC+AGG | + | chr7_4:51823305-51823324 | Msa1161640:intron | 30.0% | |
!! | TTTGTAATTGCTTTTGAACC+TGG | - | chr7_4:51823326-51823345 | None:intergenic | 30.0% |
GTAATGAGATTGAGGATTAG+TGG | - | chr7_4:51818720-51818739 | None:intergenic | 35.0% | |
AGAGAGAGAGAGAGAAAATA+GGG | - | chr7_4:51818764-51818783 | None:intergenic | 35.0% | |
!! | AATCTGGTTTCGAATTTTGC+GGG | - | chr7_4:51818799-51818818 | None:intergenic | 35.0% |
!! | GAATCTGGTTTCGAATTTTG+CGG | - | chr7_4:51818800-51818819 | None:intergenic | 35.0% |
! | TTCAATTTTAAGCTTCTCGC+TGG | + | chr7_4:51818827-51818846 | Msa1161640:five_prime_UTR | 35.0% |
GTATCATGCAAAGAAGTTTC+CGG | + | chr7_4:51819033-51819052 | Msa1161640:CDS | 35.0% | |
ATGCTACATAAATCTCAAGG+CGG | + | chr7_4:51819067-51819086 | Msa1161640:CDS | 35.0% | |
GAAAAGAAATACCCACTATC+TGG | - | chr7_4:51819244-51819263 | None:intergenic | 35.0% | |
TAACTGTTGGAAAATCACAG+TGG | + | chr7_4:51819452-51819471 | Msa1161640:intron | 35.0% | |
AACTGTTGGAAAATCACAGT+GGG | + | chr7_4:51819453-51819472 | Msa1161640:intron | 35.0% | |
CCCACAATGATACTAAACAT+AGG | + | chr7_4:51819495-51819514 | Msa1161640:intron | 35.0% | |
GCCTATGTTTAGTATCATTG+TGG | - | chr7_4:51819499-51819518 | None:intergenic | 35.0% | |
CAATACAATGTTGGAGTGTA+TGG | + | chr7_4:51819962-51819981 | Msa1161640:intron | 35.0% | |
CAATTTAGATATGGCGAACT+AGG | - | chr7_4:51820379-51820398 | None:intergenic | 35.0% | |
! | GAATGTTACCATTTGGTCTT+GGG | + | chr7_4:51820526-51820545 | Msa1161640:intron | 35.0% |
AAACGGTAAAGAAGCAGTTT+AGG | + | chr7_4:51820578-51820597 | Msa1161640:intron | 35.0% | |
AACGGTAAAGAAGCAGTTTA+GGG | + | chr7_4:51820579-51820598 | Msa1161640:intron | 35.0% | |
GTACCTATTCCAGAATTTCT+TGG | + | chr7_4:51820667-51820686 | Msa1161640:intron | 35.0% | |
CAGGGTAACTAAGAATGTTA+TGG | + | chr7_4:51820882-51820901 | Msa1161640:intron | 35.0% | |
TCAGTTTATGAAAGGGAGAA+AGG | + | chr7_4:51820964-51820983 | Msa1161640:intron | 35.0% | |
CAGTTTATGAAAGGGAGAAA+GGG | + | chr7_4:51820965-51820984 | Msa1161640:intron | 35.0% | |
!!! | AGAAAGGGCTTTGTTTTAGT+TGG | + | chr7_4:51820980-51820999 | Msa1161640:intron | 35.0% |
TATAAGGTCCGATTTCAACA+AGG | + | chr7_4:51821122-51821141 | Msa1161640:intron | 35.0% | |
GTGGAAGAAGCTTAAATGTT+AGG | + | chr7_4:51821158-51821177 | Msa1161640:intron | 35.0% | |
AAGAAGCTTAAATGTTAGGC+TGG | + | chr7_4:51821162-51821181 | Msa1161640:intron | 35.0% | |
AATCTTCAGAGTCATTACGA+AGG | - | chr7_4:51821285-51821304 | None:intergenic | 35.0% | |
! | TGATATCTGCACAACCATTT+TGG | + | chr7_4:51821315-51821334 | Msa1161640:intron | 35.0% |
! | GATATCTGCACAACCATTTT+GGG | + | chr7_4:51821316-51821335 | Msa1161640:intron | 35.0% |
GAAAAAAGGTTGTCCCAAAA+TGG | - | chr7_4:51821332-51821351 | None:intergenic | 35.0% | |
CTCAAAAGATGAGGGAAAAA+AGG | - | chr7_4:51821346-51821365 | None:intergenic | 35.0% | |
ATAGGGACTAAAAATGCTGA+TGG | - | chr7_4:51821473-51821492 | None:intergenic | 35.0% | |
TTAGGGACCAAAAATGTTGA+TGG | - | chr7_4:51821536-51821555 | None:intergenic | 35.0% | |
! | CAACCATTTTGGACAACTTA+TGG | - | chr7_4:51821741-51821760 | None:intergenic | 35.0% |
!!! | GTTGACTCAGAGTTCTTTTT+TGG | + | chr7_4:51822303-51822322 | Msa1161640:intron | 35.0% |
TATCACTCAAATCAGCCATA+TGG | - | chr7_4:51822865-51822884 | None:intergenic | 35.0% | |
! | CTTTTGAACCTGGAATATCA+AGG | - | chr7_4:51823316-51823335 | None:intergenic | 35.0% |
ATACTTGCAGAAGATCATAG+AGG | + | chr7_4:51823368-51823387 | Msa1161640:CDS | 35.0% | |
GAGAATTGATGAAGGTTCAA+AGG | + | chr7_4:51823527-51823546 | Msa1161640:CDS | 35.0% | |
ATTGATGAAGGTTCAAAGGA+TGG | + | chr7_4:51823531-51823550 | Msa1161640:CDS | 35.0% | |
CAGAAGAATGATTGTGATGT+TGG | + | chr7_4:51823588-51823607 | Msa1161640:CDS | 35.0% | |
TCATACAAGTTTGGATCCAA+AGG | - | chr7_4:51823615-51823634 | None:intergenic | 35.0% | |
TTGGAAACAGAAAATGACGA+CGG | + | chr7_4:51823660-51823679 | Msa1161640:CDS | 35.0% | |
ATTGACATGCATTGTACATG+TGG | + | chr7_4:51823886-51823905 | Msa1161640:three_prime_UTR | 35.0% | |
TGACAAGCTTGATATTGACA+TGG | - | chr7_4:51823984-51824003 | None:intergenic | 35.0% | |
TGATCTTTGTAGTCAACTTG+TGG | + | chr7_4:51824026-51824045 | Msa1161640:three_prime_UTR | 35.0% | |
TCAACTTGTGGTATATGACT+TGG | + | chr7_4:51824038-51824057 | Msa1161640:three_prime_UTR | 35.0% | |
!! | TTGGAAGGTGTCGTTAACAA+TGG | - | chr7_4:51818587-51818606 | None:intergenic | 40.0% |
! | GGGAAAGTGTAATGAGATTG+AGG | - | chr7_4:51818728-51818747 | None:intergenic | 40.0% |
GAGAGAGAGAGAGAGAAAAT+AGG | - | chr7_4:51818765-51818784 | None:intergenic | 40.0% | |
GTGAACAGTTTGCAAATGGT+GGG | + | chr7_4:51819098-51819117 | Msa1161640:CDS | 40.0% | |
TGAACAGTTTGCAAATGGTG+GGG | + | chr7_4:51819099-51819118 | Msa1161640:CDS | 40.0% | |
GTGAAAAATGTTCAACCTGC+TGG | + | chr7_4:51819139-51819158 | Msa1161640:CDS | 40.0% | |
AAAAATGTTCAACCTGCTGG+AGG | + | chr7_4:51819142-51819161 | Msa1161640:CDS | 40.0% | |
!! | GCGTAATAGCATCGACAAAA+CGG | - | chr7_4:51819210-51819229 | None:intergenic | 40.0% |
TTTAGAAGTTAGGAGGAGTG+TGG | + | chr7_4:51819327-51819346 | Msa1161640:intron | 40.0% | |
TTGTGGGTATGTCAGAATCA+CGG | - | chr7_4:51819482-51819501 | None:intergenic | 40.0% | |
CTAGGTTCTCCCAATTTAGA+AGG | - | chr7_4:51819526-51819545 | None:intergenic | 40.0% | |
CTTGAAGTCTAAACCCTTTC+TGG | + | chr7_4:51819597-51819616 | Msa1161640:intron | 40.0% | |
! | AGGGTTTAGGATACCAGAAA+GGG | - | chr7_4:51819613-51819632 | None:intergenic | 40.0% |
! | AGGGTTTAGACTTGTTTGGA+AGG | - | chr7_4:51819649-51819668 | None:intergenic | 40.0% |
CTGCAAGACTGTAACTACAT+GGG | + | chr7_4:51819886-51819905 | Msa1161640:intron | 40.0% | |
TGGAAGGTCAGATTCTAACA+AGG | - | chr7_4:51820215-51820234 | None:intergenic | 40.0% | |
! | ACCTTCCAGAAATGCTGATT+TGG | + | chr7_4:51820227-51820246 | Msa1161640:intron | 40.0% |
CCTAGATTGAATCTCGTGAT+GGG | + | chr7_4:51820443-51820462 | Msa1161640:intron | 40.0% | |
GGAATGTTACCATTTGGTCT+TGG | + | chr7_4:51820525-51820544 | Msa1161640:intron | 40.0% | |
ACTGCTTCTTTACCGTTTGA+GGG | - | chr7_4:51820576-51820595 | None:intergenic | 40.0% | |
AACTGCTTCTTTACCGTTTG+AGG | - | chr7_4:51820577-51820596 | None:intergenic | 40.0% | |
TTAGGGTACAAGAATTGACG+AGG | + | chr7_4:51820596-51820615 | Msa1161640:intron | 40.0% | |
TAGGGTACAAGAATTGACGA+GGG | + | chr7_4:51820597-51820616 | Msa1161640:intron | 40.0% | |
!! | CAACAGAAATTGGTCTTGTG+TGG | - | chr7_4:51820627-51820646 | None:intergenic | 40.0% |
!! | CTCCCAAGAAATTCTGGAAT+AGG | - | chr7_4:51820673-51820692 | None:intergenic | 40.0% |
CTATTCCAGAATTTCTTGGG+AGG | + | chr7_4:51820671-51820690 | Msa1161640:intron | 40.0% | |
CAAAGAAGCCCATAATCATC+GGG | - | chr7_4:51820835-51820854 | None:intergenic | 40.0% | |
GCAAAGAAGCCCATAATCAT+CGG | - | chr7_4:51820836-51820855 | None:intergenic | 40.0% | |
!! | AAGAAGAGTGCTAAGCTTGT+TGG | + | chr7_4:51820922-51820941 | Msa1161640:intron | 40.0% |
!! | AGAAGAGTGCTAAGCTTGTT+GGG | + | chr7_4:51820923-51820942 | Msa1161640:intron | 40.0% |
TCCGATTTCAACAAGGACAA+GGG | + | chr7_4:51821129-51821148 | Msa1161640:intron | 40.0% | |
TTTGGTCCCTAAAATGCTCA+AGG | + | chr7_4:51821544-51821563 | Msa1161640:intron | 40.0% | |
ATGCTCAAGGAAAATGTCAC+AGG | + | chr7_4:51821557-51821576 | Msa1161640:intron | 40.0% | |
TGCTCAAGGAAAATGTCACA+GGG | + | chr7_4:51821558-51821577 | Msa1161640:intron | 40.0% | |
GTCCCATAAGTTGTCCAAAA+TGG | + | chr7_4:51821735-51821754 | Msa1161640:intron | 40.0% | |
TGCCCAGAGAATAGTAGTTA+AGG | - | chr7_4:51821808-51821827 | None:intergenic | 40.0% | |
ATCACTCTCAGAACACCTTT+CGG | - | chr7_4:51822008-51822027 | None:intergenic | 40.0% | |
!! | AAAGGTGTTCTGAGAGTGAT+GGG | + | chr7_4:51822008-51822027 | Msa1161640:CDS | 40.0% |
ACATGATAAATGGTCAGTCC+AGG | - | chr7_4:51822038-51822057 | None:intergenic | 40.0% | |
ACGAAGCGCAAGAAAAAACA+AGG | - | chr7_4:51822231-51822250 | None:intergenic | 40.0% | |
! | AATTCTGGAGACAGCATTTC+TGG | + | chr7_4:51822354-51822373 | Msa1161640:intron | 40.0% |
AAAACAACTAAGACACCCAC+GGG | - | chr7_4:51822392-51822411 | None:intergenic | 40.0% | |
GAAAACAACTAAGACACCCA+CGG | - | chr7_4:51822393-51822412 | None:intergenic | 40.0% | |
!! | AGATAAGTGATGGATTACCC+AGG | - | chr7_4:51823130-51823149 | None:intergenic | 40.0% |
CTTCTATGAGTGAGCATTTC+TGG | + | chr7_4:51823265-51823284 | Msa1161640:intron | 40.0% | |
!! | TGAGTGAGCATTTCTGGTAA+TGG | + | chr7_4:51823271-51823290 | Msa1161640:intron | 40.0% |
ACAAATGAGAATTGAAGCCC+AGG | + | chr7_4:51823341-51823360 | Msa1161640:CDS | 40.0% | |
CAAATGAGAATTGAAGCCCA+GGG | + | chr7_4:51823342-51823361 | Msa1161640:CDS | 40.0% | |
CTTCTGCAAGTATTTACCCT+GGG | - | chr7_4:51823361-51823380 | None:intergenic | 40.0% | |
TCTTCTGCAAGTATTTACCC+TGG | - | chr7_4:51823362-51823381 | None:intergenic | 40.0% | |
ATAGAGGAACAGCAGAAACT+AGG | + | chr7_4:51823384-51823403 | Msa1161640:CDS | 40.0% | |
! | TTTTGCTTATCATGGGACAG+CGG | - | chr7_4:51823438-51823457 | None:intergenic | 40.0% |
TGATTGTGATGTTGGTCCTT+TGG | + | chr7_4:51823596-51823615 | Msa1161640:CDS | 40.0% | |
GCATCGTCTTCATACAAGTT+TGG | - | chr7_4:51823624-51823643 | None:intergenic | 40.0% | |
AACTTGTATGAAGACGATGC+TGG | + | chr7_4:51823624-51823643 | Msa1161640:CDS | 40.0% | |
! | TGCTGGCTATGGATTTGATT+TGG | + | chr7_4:51823641-51823660 | Msa1161640:CDS | 40.0% |
! | ATTTCTGTTGACTGAGAGTG+CGG | - | chr7_4:51823864-51823883 | None:intergenic | 40.0% |
ATGCATTGTACATGTGGTCA+TGG | + | chr7_4:51823892-51823911 | Msa1161640:three_prime_UTR | 40.0% | |
TGGTCATGGATGATGAATGT+TGG | + | chr7_4:51823906-51823925 | Msa1161640:three_prime_UTR | 40.0% | |
GGTCATGGATGATGAATGTT+GGG | + | chr7_4:51823907-51823926 | Msa1161640:three_prime_UTR | 40.0% | |
GCTTGTCAATTAGCTAGTGA+CGG | + | chr7_4:51823996-51824015 | Msa1161640:three_prime_UTR | 40.0% | |
! | GTGTCGTTAACAATGGTGGA+GGG | - | chr7_4:51818580-51818599 | None:intergenic | 45.0% |
!! | GAAGGTGTCGTTAACAATGG+TGG | - | chr7_4:51818584-51818603 | None:intergenic | 45.0% |
!! | TGAGCGTTGAAATGAACGGA+CGG | - | chr7_4:51818621-51818640 | None:intergenic | 45.0% |
TCATGCAAAGAAGTTTCCGG+AGG | + | chr7_4:51819036-51819055 | Msa1161640:CDS | 45.0% | |
CTACATAAATCTCAAGGCGG+TGG | + | chr7_4:51819070-51819089 | Msa1161640:CDS | 45.0% | |
GGTGGTGAACAGTTTGCAAA+TGG | + | chr7_4:51819094-51819113 | Msa1161640:CDS | 45.0% | |
GGTGAACAGTTTGCAAATGG+TGG | + | chr7_4:51819097-51819116 | Msa1161640:CDS | 45.0% | |
GAACAGTTTGCAAATGGTGG+GGG | + | chr7_4:51819100-51819119 | Msa1161640:CDS | 45.0% | |
!!! | CCTGTGCTGTGCTTTTTTCT+AGG | - | chr7_4:51819544-51819563 | None:intergenic | 45.0% |
! | CCTAGAAAAAAGCACAGCAC+AGG | + | chr7_4:51819541-51819560 | Msa1161640:intron | 45.0% |
! | AGAAAAAAGCACAGCACAGG+AGG | + | chr7_4:51819544-51819563 | Msa1161640:intron | 45.0% |
! | GAGGGTTTAGGATACCAGAA+AGG | - | chr7_4:51819614-51819633 | None:intergenic | 45.0% |
! | TAGACTTGTTTGGAAGGCGA+GGG | - | chr7_4:51819643-51819662 | None:intergenic | 45.0% |
! | TTAGACTTGTTTGGAAGGCG+AGG | - | chr7_4:51819644-51819663 | None:intergenic | 45.0% |
CCATGTAGTTACAGTCTTGC+AGG | - | chr7_4:51819888-51819907 | None:intergenic | 45.0% | |
CCTGCAAGACTGTAACTACA+TGG | + | chr7_4:51819885-51819904 | Msa1161640:intron | 45.0% | |
TTCGTGCACAACTCAAACCT+TGG | - | chr7_4:51819938-51819957 | None:intergenic | 45.0% | |
! | GCCAAATCAGCATTTCTGGA+AGG | - | chr7_4:51820231-51820250 | None:intergenic | 45.0% |
GCATGCCAAATCAGCATTTC+TGG | - | chr7_4:51820235-51820254 | None:intergenic | 45.0% | |
GCCTAGATTGAATCTCGTGA+TGG | + | chr7_4:51820442-51820461 | Msa1161640:intron | 45.0% | |
CCCATCACGAGATTCAATCT+AGG | - | chr7_4:51820446-51820465 | None:intergenic | 45.0% | |
!! | ATTGAATCTCGTGATGGGTC+AGG | + | chr7_4:51820448-51820467 | Msa1161640:intron | 45.0% |
GAGGGAGGAATGTTACCATT+TGG | + | chr7_4:51820519-51820538 | Msa1161640:intron | 45.0% | |
TTCTTTACCGTTTGAGGGAC+CGG | - | chr7_4:51820571-51820590 | None:intergenic | 45.0% | |
AGGGTACAAGAATTGACGAG+GGG | + | chr7_4:51820598-51820617 | Msa1161640:intron | 45.0% | |
AGTGAGGACGCAACAGAAAT+TGG | - | chr7_4:51820637-51820656 | None:intergenic | 45.0% | |
AGGTACATAACTCGACAGTG+AGG | - | chr7_4:51820653-51820672 | None:intergenic | 45.0% | |
GTTCTCCTCCCAAGAAATTC+TGG | - | chr7_4:51820679-51820698 | None:intergenic | 45.0% | |
GATTGCGTGATACACGAAGA+AGG | + | chr7_4:51820790-51820809 | Msa1161640:intron | 45.0% | |
!!! | GAAGGTTTTGTTTGCTCGCA+TGG | + | chr7_4:51820808-51820827 | Msa1161640:intron | 45.0% |
TAGAGATGGTCATTGAGTGC+AGG | + | chr7_4:51820863-51820882 | Msa1161640:intron | 45.0% | |
AGAGATGGTCATTGAGTGCA+GGG | + | chr7_4:51820864-51820883 | Msa1161640:intron | 45.0% | |
GTCCGATTTCAACAAGGACA+AGG | + | chr7_4:51821128-51821147 | Msa1161640:intron | 45.0% | |
GCCCTTGTCCTTGTTGAAAT+CGG | - | chr7_4:51821133-51821152 | None:intergenic | 45.0% | |
ACAAGGACAAGGGCTAAAAG+TGG | + | chr7_4:51821139-51821158 | Msa1161640:intron | 45.0% | |
GACAGGGACTAAAATGCTGA+TGG | - | chr7_4:51821505-51821524 | None:intergenic | 45.0% | |
ATGATAGGAGCAACACCGAA+AGG | + | chr7_4:51821990-51822009 | Msa1161640:intron | 45.0% | |
!! | GAAAGGTGTTCTGAGAGTGA+TGG | + | chr7_4:51822007-51822026 | Msa1161640:CDS | 45.0% |
!! | CTACATGTAGAAGTATCGCC+TGG | + | chr7_4:51822166-51822185 | Msa1161640:intron | 45.0% |
AAGTACTTGCCTGAATCACC+AGG | + | chr7_4:51822191-51822210 | Msa1161640:intron | 45.0% | |
TTACCATCACCTGGTGATTC+AGG | - | chr7_4:51822203-51822222 | None:intergenic | 45.0% | |
! | GAATCACCAGGTGATGGTAA+AGG | + | chr7_4:51822203-51822222 | Msa1161640:intron | 45.0% |
AAACAACTAAGACACCCACG+GGG | - | chr7_4:51822391-51822410 | None:intergenic | 45.0% | |
ATAAAACAATCGTGCCCTGC+AGG | + | chr7_4:51822465-51822484 | Msa1161640:intron | 45.0% | |
TAAAACAATCGTGCCCTGCA+GGG | + | chr7_4:51822466-51822485 | Msa1161640:intron | 45.0% | |
!! | TTGATTTGCAATCCCCTGCA+GGG | - | chr7_4:51822482-51822501 | None:intergenic | 45.0% |
!! | ATTGATTTGCAATCCCCTGC+AGG | - | chr7_4:51822483-51822502 | None:intergenic | 45.0% |
AGTCATGCATCTTGTGTCCT+GGG | + | chr7_4:51823110-51823129 | Msa1161640:intron | 45.0% | |
! | TTCTAATTTGCCTCGGACTC+AGG | + | chr7_4:51823189-51823208 | Msa1161640:intron | 45.0% |
ACACTTAAATCCTGAGTCCG+AGG | - | chr7_4:51823202-51823221 | None:intergenic | 45.0% | |
GCAGAAACTAGGTAGTACCT+TGG | + | chr7_4:51823395-51823414 | Msa1161640:CDS | 45.0% | |
!!! | GGGCTGGTTTTGCTTATCAT+GGG | - | chr7_4:51823445-51823464 | None:intergenic | 45.0% |
! | TATGAAGACGATGCTGGCTA+TGG | + | chr7_4:51823630-51823649 | Msa1161640:CDS | 45.0% |
! | TTTCTGTTGACTGAGAGTGC+GGG | - | chr7_4:51823863-51823882 | None:intergenic | 45.0% |
!! | GGTGTCGTTAACAATGGTGG+AGG | - | chr7_4:51818581-51818600 | None:intergenic | 50.0% |
!!! | ACGGCGGCGTTTTAATTGGA+AGG | - | chr7_4:51818602-51818621 | None:intergenic | 50.0% |
TGTAGCATCATCGTCTCCTC+CGG | - | chr7_4:51819055-51819074 | None:intergenic | 50.0% | |
CATAAATCTCAAGGCGGTGG+TGG | + | chr7_4:51819073-51819092 | Msa1161640:CDS | 50.0% | |
! | GCAAATGGTGGGGGTTTGAA+TGG | + | chr7_4:51819109-51819128 | Msa1161640:CDS | 50.0% |
AATGTTCAACCTGCTGGAGG+TGG | + | chr7_4:51819145-51819164 | Msa1161640:CDS | 50.0% | |
GTCGATGCTATTACGCAGCT+TGG | + | chr7_4:51819214-51819233 | Msa1161640:CDS | 50.0% | |
GATGCTATTACGCAGCTTGG+TGG | + | chr7_4:51819217-51819236 | Msa1161640:CDS | 50.0% | |
! | AGCTTGGTGGACCAGATAGT+GGG | + | chr7_4:51819230-51819249 | Msa1161640:intron | 50.0% |
! | AGAAGTTAGGAGGAGTGTGG+AGG | + | chr7_4:51819330-51819349 | Msa1161640:intron | 50.0% |
! | GAAGTTAGGAGGAGTGTGGA+GGG | + | chr7_4:51819331-51819350 | Msa1161640:intron | 50.0% |
! | TGTGGAGGGAAAGGGCTTTT+TGG | + | chr7_4:51819345-51819364 | Msa1161640:intron | 50.0% |
! | GAGGGAAAGGGCTTTTTGGA+TGG | + | chr7_4:51819349-51819368 | Msa1161640:intron | 50.0% |
! | AAAAAGCACAGCACAGGAGG+AGG | + | chr7_4:51819547-51819566 | Msa1161640:intron | 50.0% |
AGGAGGAGGATGACTTTGGA+GGG | + | chr7_4:51819561-51819580 | Msa1161640:intron | 50.0% | |
! | AGACTTGTTTGGAAGGCGAG+GGG | - | chr7_4:51819642-51819661 | None:intergenic | 50.0% |
!! | GCTGATTTGGCATGCTGATG+TGG | + | chr7_4:51820240-51820259 | Msa1161640:intron | 50.0% |
GGGTACAAGAATTGACGAGG+GGG | + | chr7_4:51820599-51820618 | Msa1161640:intron | 50.0% | |
TCGCATGGTCCCGATGATTA+TGG | + | chr7_4:51820823-51820842 | Msa1161640:intron | 50.0% | |
CGCATGGTCCCGATGATTAT+GGG | + | chr7_4:51820824-51820843 | Msa1161640:intron | 50.0% | |
ATTCAGGCAAGTACTTCGCC+AGG | - | chr7_4:51822187-51822206 | None:intergenic | 50.0% | |
TTGCCTGAATCACCAGGTGA+TGG | + | chr7_4:51822197-51822216 | Msa1161640:intron | 50.0% | |
! | AAGGCACCTTTACCATCACC+TGG | - | chr7_4:51822212-51822231 | None:intergenic | 50.0% |
!! | AGGTAGAGGCGTCAAAGTGA+AGG | - | chr7_4:51822434-51822453 | None:intergenic | 50.0% |
AAAACAATCGTGCCCTGCAG+GGG | + | chr7_4:51822467-51822486 | Msa1161640:intron | 50.0% | |
TGACGCACTACGAATGCAGA+TGG | + | chr7_4:51822502-51822521 | Msa1161640:intron | 50.0% | |
ACGTCTGCATGAACAGCTTG+AGG | + | chr7_4:51822535-51822554 | Msa1161640:intron | 50.0% | |
GAGTCATGCATCTTGTGTCC+TGG | + | chr7_4:51823109-51823128 | Msa1161640:intron | 50.0% | |
AGGTAGTACCTTGGCAGCAT+CGG | + | chr7_4:51823404-51823423 | Msa1161640:CDS | 50.0% | |
AAGTGTTTCCGATGCTGCCA+AGG | - | chr7_4:51823415-51823434 | None:intergenic | 50.0% | |
!!! | GGGGCTGGTTTTGCTTATCA+TGG | - | chr7_4:51823446-51823465 | None:intergenic | 50.0% |
! | AGACCCAGAAGGCTCTGATA+GGG | - | chr7_4:51823466-51823485 | None:intergenic | 50.0% |
! | TAGACCCAGAAGGCTCTGAT+AGG | - | chr7_4:51823467-51823486 | None:intergenic | 50.0% |
!! | GGGAGAAAAAGTGCCTGCAA+GGG | - | chr7_4:51823496-51823515 | None:intergenic | 50.0% |
GTGTTTACCACTCTCACGAC+AGG | - | chr7_4:51823841-51823860 | None:intergenic | 50.0% | |
!! | ACGGACGGCGGCGTTTTAAT+TGG | - | chr7_4:51818606-51818625 | None:intergenic | 55.0% |
GCGTTGAAATGAACGGACGG+CGG | - | chr7_4:51818618-51818637 | None:intergenic | 55.0% | |
! | AAATCTCAAGGCGGTGGTGG+TGG | + | chr7_4:51819076-51819095 | Msa1161640:CDS | 55.0% |
TTCAACCTGCTGGAGGTGGT+GGG | + | chr7_4:51819149-51819168 | Msa1161640:CDS | 55.0% | |
! | CAGCTTGGTGGACCAGATAG+TGG | + | chr7_4:51819229-51819248 | Msa1161640:intron | 55.0% |
! | TAGGAGGAGTGTGGAGGGAA+AGG | + | chr7_4:51819336-51819355 | Msa1161640:intron | 55.0% |
! | AGGAGGAGTGTGGAGGGAAA+GGG | + | chr7_4:51819337-51819356 | Msa1161640:intron | 55.0% |
GCACAGGAGGAGGATGACTT+TGG | + | chr7_4:51819557-51819576 | Msa1161640:intron | 55.0% | |
CAGGAGGAGGATGACTTTGG+AGG | + | chr7_4:51819560-51819579 | Msa1161640:intron | 55.0% | |
! | GACTTGTTTGGAAGGCGAGG+GGG | - | chr7_4:51819641-51819660 | None:intergenic | 55.0% |
AGTCCCGATACGTGACGAAG+AGG | + | chr7_4:51820500-51820519 | Msa1161640:intron | 55.0% | |
GTCCCGATACGTGACGAAGA+GGG | + | chr7_4:51820501-51820520 | Msa1161640:intron | 55.0% | |
CTCCCTCTTCGTCACGTATC+GGG | - | chr7_4:51820506-51820525 | None:intergenic | 55.0% | |
CCTCCCTCTTCGTCACGTAT+CGG | - | chr7_4:51820507-51820526 | None:intergenic | 55.0% | |
CGGTGGATCCCAAGACCAAA+TGG | - | chr7_4:51820537-51820556 | None:intergenic | 55.0% | |
! | TGGTCTTGGGATCCACCGAT+CGG | + | chr7_4:51820539-51820558 | Msa1161640:intron | 55.0% |
AGGAGAACAGTTGCCGTCAG+TGG | + | chr7_4:51820691-51820710 | Msa1161640:intron | 55.0% | |
CCGCTACGAATCACCACTGA+CGG | - | chr7_4:51820707-51820726 | None:intergenic | 55.0% | |
CCGTCAGTGGTGATTCGTAG+CGG | + | chr7_4:51820704-51820723 | Msa1161640:intron | 55.0% | |
CGCACTACGAATGCAGATGG+AGG | + | chr7_4:51822505-51822524 | Msa1161640:intron | 55.0% | |
AGCCCCTATCAGAGCCTTCT+GGG | + | chr7_4:51823460-51823479 | Msa1161640:CDS | 55.0% | |
! | GACCCAGAAGGCTCTGATAG+GGG | - | chr7_4:51823465-51823484 | None:intergenic | 55.0% |
! | AGGGCATCACTAGACCCAGA+AGG | - | chr7_4:51823477-51823496 | None:intergenic | 55.0% |
!! | GGGGAGAAAAAGTGCCTGCA+AGG | - | chr7_4:51823497-51823516 | None:intergenic | 55.0% |
CTTCTCTCCTGTCGTGAGAG+TGG | + | chr7_4:51823831-51823850 | Msa1161640:three_prime_UTR | 55.0% | |
GTTCAACCTGCTGGAGGTGG+TGG | + | chr7_4:51819148-51819167 | Msa1161640:CDS | 60.0% | |
GTGGGAAGCAGCGTTTGCGT+TGG | + | chr7_4:51819167-51819186 | Msa1161640:CDS | 60.0% | |
GCAGCGTTTGCGTTGGACGT+CGG | + | chr7_4:51819174-51819193 | Msa1161640:CDS | 60.0% | |
GTTTGGAAGGCGAGGGGGAA+GGG | - | chr7_4:51819636-51819655 | None:intergenic | 60.0% | |
TGTTTGGAAGGCGAGGGGGA+AGG | - | chr7_4:51819637-51819656 | None:intergenic | 60.0% | |
CCGATACGTGACGAAGAGGG+AGG | + | chr7_4:51820504-51820523 | Msa1161640:intron | 60.0% | |
TTGGGATCCACCGATCGGCT+TGG | + | chr7_4:51820544-51820563 | Msa1161640:intron | 60.0% | |
!! | ATCCACCGATCGGCTTGGTC+CGG | + | chr7_4:51820549-51820568 | Msa1161640:intron | 60.0% |
GCTTGGTCCGGTCCCTCAAA+CGG | + | chr7_4:51820561-51820580 | Msa1161640:intron | 60.0% | |
!! | CTGAGAGTGATGGGTGTGCC+TGG | + | chr7_4:51822017-51822036 | Msa1161640:CDS | 60.0% |
!! | TGGCGCTGATTCTTCCCCGT+GGG | + | chr7_4:51822374-51822393 | Msa1161640:intron | 60.0% |
! | CAGAAGGCTCTGATAGGGGC+TGG | - | chr7_4:51823461-51823480 | None:intergenic | 60.0% |
CAGCCCCTATCAGAGCCTTC+TGG | + | chr7_4:51823459-51823478 | Msa1161640:CDS | 60.0% | |
GGGTCTAGTGATGCCCTTGC+AGG | + | chr7_4:51823480-51823499 | Msa1161640:CDS | 60.0% | |
TGCTTCCCACCACCTCCAGC+AGG | - | chr7_4:51819157-51819176 | None:intergenic | 65.0% | |
CGAGGGGGAAGGGAGGGTTT+AGG | - | chr7_4:51819626-51819645 | None:intergenic | 65.0% | |
AGGGACCGGACCAAGCCGAT+CGG | - | chr7_4:51820557-51820576 | None:intergenic | 65.0% | |
!! | CTGGCGCTGATTCTTCCCCG+TGG | + | chr7_4:51822373-51822392 | Msa1161640:intron | 65.0% |
GGAAGGCGAGGGGGAAGGGA+GGG | - | chr7_4:51819632-51819651 | None:intergenic | 70.0% | |
TGGAAGGCGAGGGGGAAGGG+AGG | - | chr7_4:51819633-51819652 | None:intergenic | 70.0% | |
GACCGGACCAAGCCGATCGG+TGG | - | chr7_4:51820554-51820573 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 51818568 | 51824084 | 51818568 | ID=Msa1161640;Name=Msa1161640 |
chr7_4 | mRNA | 51818568 | 51824084 | 51818568 | ID=Msa1161640-mRNA-1;Parent=Msa1161640;Name=Msa1161640-mRNA-1;_AED=0.15;_eAED=0.15;_QI=288|0.66|1|1|0|0.5|4|383|222 |
chr7_4 | exon | 51818568 | 51818848 | 51818568 | ID=Msa1161640-mRNA-1:exon:14771;Parent=Msa1161640-mRNA-1 |
chr7_4 | exon | 51819024 | 51819247 | 51819024 | ID=Msa1161640-mRNA-1:exon:14772;Parent=Msa1161640-mRNA-1 |
chr7_4 | exon | 51821997 | 51822073 | 51821997 | ID=Msa1161640-mRNA-1:exon:14773;Parent=Msa1161640-mRNA-1 |
chr7_4 | exon | 51823327 | 51824084 | 51823327 | ID=Msa1161640-mRNA-1:exon:14774;Parent=Msa1161640-mRNA-1 |
chr7_4 | five_prime_UTR | 51818568 | 51818848 | 51818568 | ID=Msa1161640-mRNA-1:five_prime_utr;Parent=Msa1161640-mRNA-1 |
chr7_4 | five_prime_UTR | 51819024 | 51819030 | 51819024 | ID=Msa1161640-mRNA-1:five_prime_utr;Parent=Msa1161640-mRNA-1 |
chr7_4 | CDS | 51819031 | 51819247 | 51819031 | ID=Msa1161640-mRNA-1:cds;Parent=Msa1161640-mRNA-1 |
chr7_4 | CDS | 51821997 | 51822073 | 51821997 | ID=Msa1161640-mRNA-1:cds;Parent=Msa1161640-mRNA-1 |
chr7_4 | CDS | 51823327 | 51823701 | 51823327 | ID=Msa1161640-mRNA-1:cds;Parent=Msa1161640-mRNA-1 |
chr7_4 | three_prime_UTR | 51823702 | 51824084 | 51823702 | ID=Msa1161640-mRNA-1:three_prime_utr;Parent=Msa1161640-mRNA-1 |
Gene Sequence |
Protein sequence |