Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1162290 | XP_013449453.1 | 93.367 | 196 | 11 | 2 | 1 | 196 | 1 | 194 | 1.67e-132 | 379 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1162290 | sp|Q949N0|NAC53_ARATH | 34.868 | 152 | 92 | 6 | 18 | 164 | 9 | 158 | 1.04e-20 | 92.4 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1162290 | I3SX53 | 93.367 | 196 | 11 | 2 | 1 | 196 | 1 | 194 | 7.98e-133 | 379 |
Gene ID | Type | Classification |
---|---|---|
Msa1162290 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1162290 | MtrunA17_Chr7g0251651 | 93.367 | 196 | 11 | 2 | 1 | 196 | 1 | 194 | 1.54e-136 | 379 |
Msa1162290 | MtrunA17_Chr7g0251671 | 71.429 | 140 | 39 | 1 | 18 | 157 | 10 | 148 | 4.88e-72 | 215 |
Msa1162290 | MtrunA17_Chr7g0251661 | 69.014 | 142 | 43 | 1 | 16 | 157 | 8 | 148 | 5.66e-71 | 212 |
Msa1162290 | MtrunA17_Chr2g0309891 | 32.911 | 158 | 98 | 5 | 16 | 167 | 4 | 159 | 5.20e-21 | 88.6 |
Msa1162290 | MtrunA17_Chr6g0481091 | 32.298 | 161 | 102 | 5 | 16 | 171 | 4 | 162 | 1.28e-20 | 85.9 |
Msa1162290 | MtrunA17_Chr4g0047841 | 34.932 | 146 | 84 | 6 | 18 | 157 | 15 | 155 | 2.97e-19 | 84.0 |
Msa1162290 | MtrunA17_Chr5g0442771 | 37.778 | 135 | 75 | 6 | 13 | 142 | 14 | 144 | 4.20e-19 | 83.2 |
Msa1162290 | MtrunA17_Chr2g0311651 | 31.383 | 188 | 93 | 9 | 13 | 174 | 18 | 195 | 1.27e-18 | 81.6 |
Msa1162290 | MtrunA17_Chr5g0433781 | 35.606 | 132 | 76 | 5 | 16 | 142 | 4 | 131 | 2.98e-18 | 82.0 |
Msa1162290 | MtrunA17_Chr2g0311661 | 36.364 | 143 | 74 | 7 | 10 | 142 | 14 | 149 | 3.03e-18 | 80.5 |
Msa1162290 | MtrunA17_Chr3g0109821 | 34.848 | 132 | 77 | 5 | 16 | 142 | 4 | 131 | 5.56e-18 | 81.3 |
Msa1162290 | MtrunA17_Chr6g0453131 | 31.507 | 146 | 94 | 4 | 5 | 147 | 2 | 144 | 1.20e-17 | 79.7 |
Msa1162290 | MtrunA17_Chr5g0417791 | 29.193 | 161 | 105 | 6 | 16 | 173 | 1 | 155 | 2.89e-17 | 77.4 |
Msa1162290 | MtrunA17_Chr8g0384721 | 30.216 | 139 | 89 | 5 | 12 | 147 | 1 | 134 | 3.80e-17 | 77.4 |
Msa1162290 | MtrunA17_Chr5g0417001 | 33.094 | 139 | 85 | 6 | 14 | 148 | 11 | 145 | 5.23e-17 | 78.2 |
Msa1162290 | MtrunA17_Chr3g0130731 | 31.655 | 139 | 87 | 5 | 12 | 147 | 1 | 134 | 9.71e-17 | 76.3 |
Msa1162290 | MtrunA17_Chr7g0252971 | 31.618 | 136 | 79 | 5 | 18 | 142 | 8 | 140 | 9.82e-17 | 77.0 |
Msa1162290 | MtrunA17_Chr3g0124761 | 31.852 | 135 | 84 | 4 | 16 | 147 | 5 | 134 | 1.12e-16 | 76.3 |
Msa1162290 | MtrunA17_Chr1g0147421 | 33.333 | 132 | 80 | 6 | 18 | 144 | 27 | 155 | 1.28e-16 | 76.6 |
Msa1162290 | MtrunA17_Chr2g0318101 | 34.351 | 131 | 75 | 6 | 18 | 142 | 15 | 140 | 1.60e-16 | 76.3 |
Msa1162290 | MtrunA17_Chr4g0042561 | 28.571 | 161 | 104 | 7 | 17 | 173 | 8 | 161 | 2.43e-16 | 75.1 |
Msa1162290 | MtrunA17_Chr1g0201021 | 30.601 | 183 | 109 | 7 | 2 | 177 | 3 | 174 | 2.51e-16 | 76.3 |
Msa1162290 | MtrunA17_Chr6g0461661 | 32.824 | 131 | 81 | 5 | 16 | 142 | 16 | 143 | 2.54e-16 | 75.9 |
Msa1162290 | MtrunA17_Chr1g0183741 | 32.353 | 136 | 85 | 5 | 15 | 146 | 7 | 139 | 3.93e-16 | 74.3 |
Msa1162290 | MtrunA17_Chr5g0428991 | 29.231 | 195 | 123 | 6 | 5 | 186 | 12 | 204 | 4.76e-16 | 75.5 |
Msa1162290 | MtrunA17_Chr8g0345711 | 32.308 | 130 | 81 | 4 | 18 | 142 | 12 | 139 | 5.03e-16 | 72.4 |
Msa1162290 | MtrunA17_Chr7g0214071 | 35.338 | 133 | 76 | 6 | 16 | 144 | 13 | 139 | 8.11e-16 | 73.6 |
Msa1162290 | MtrunA17_Chr4g0018391 | 28.750 | 160 | 108 | 5 | 18 | 173 | 7 | 164 | 1.21e-15 | 73.9 |
Msa1162290 | MtrunA17_Chr2g0316971 | 32.593 | 135 | 84 | 6 | 18 | 148 | 23 | 154 | 1.44e-15 | 73.9 |
Msa1162290 | MtrunA17_Chr6g0453451 | 34.932 | 146 | 87 | 7 | 1 | 142 | 2 | 143 | 1.48e-15 | 73.6 |
Msa1162290 | MtrunA17_Chr8g0345671 | 32.143 | 140 | 87 | 5 | 18 | 152 | 11 | 147 | 1.76e-15 | 73.6 |
Msa1162290 | MtrunA17_Chr3g0139331 | 32.061 | 131 | 82 | 6 | 18 | 144 | 11 | 138 | 1.84e-15 | 73.2 |
Msa1162290 | MtrunA17_Chr8g0361731 | 30.263 | 152 | 97 | 7 | 4 | 151 | 2 | 148 | 2.34e-15 | 73.2 |
Msa1162290 | MtrunA17_Chr3g0128151 | 33.571 | 140 | 82 | 5 | 12 | 142 | 10 | 147 | 2.72e-15 | 73.6 |
Msa1162290 | MtrunA17_Chr8g0345701 | 28.000 | 150 | 85 | 4 | 12 | 142 | 1 | 146 | 7.17e-15 | 69.3 |
Msa1162290 | MtrunA17_Chr6g0484441 | 28.571 | 154 | 103 | 6 | 18 | 168 | 5 | 154 | 9.75e-15 | 71.2 |
Msa1162290 | MtrunA17_Chr7g0261411 | 32.117 | 137 | 84 | 6 | 15 | 146 | 7 | 139 | 1.54e-14 | 70.5 |
Msa1162290 | MtrunA17_Chr3g0144271 | 33.846 | 130 | 78 | 7 | 18 | 142 | 23 | 149 | 1.75e-14 | 70.9 |
Msa1162290 | MtrunA17_Chr4g0060931 | 30.827 | 133 | 85 | 6 | 13 | 142 | 12 | 140 | 1.85e-14 | 70.5 |
Msa1162290 | MtrunA17_Chr4g0054791 | 27.485 | 171 | 118 | 3 | 14 | 179 | 2 | 171 | 2.15e-14 | 70.1 |
Msa1162290 | MtrunA17_Chr3g0091921 | 31.579 | 133 | 84 | 6 | 13 | 142 | 11 | 139 | 3.02e-14 | 69.7 |
Msa1162290 | MtrunA17_Chr1g0197361 | 30.464 | 151 | 94 | 7 | 21 | 164 | 11 | 157 | 3.12e-14 | 70.5 |
Msa1162290 | MtrunA17_Chr7g0253011 | 33.094 | 139 | 84 | 6 | 16 | 148 | 15 | 150 | 3.70e-14 | 69.7 |
Msa1162290 | MtrunA17_Chr8g0359921 | 32.824 | 131 | 79 | 6 | 16 | 142 | 12 | 137 | 3.88e-14 | 69.3 |
Msa1162290 | MtrunA17_Chr8g0345691 | 31.343 | 134 | 77 | 5 | 18 | 142 | 12 | 139 | 4.14e-14 | 69.7 |
Msa1162290 | MtrunA17_Chr8g0372121 | 30.597 | 134 | 87 | 5 | 18 | 147 | 6 | 137 | 5.04e-14 | 68.9 |
Msa1162290 | MtrunA17_Chr7g0263931 | 29.050 | 179 | 104 | 9 | 7 | 177 | 6 | 169 | 5.23e-14 | 69.3 |
Msa1162290 | MtrunA17_Chr2g0326361 | 28.859 | 149 | 97 | 6 | 18 | 162 | 14 | 157 | 8.06e-14 | 68.6 |
Msa1162290 | MtrunA17_Chr5g0400461 | 29.240 | 171 | 101 | 7 | 15 | 174 | 3 | 164 | 8.76e-14 | 68.6 |
Msa1162290 | MtrunA17_Chr4g0056541 | 28.571 | 161 | 105 | 7 | 18 | 172 | 7 | 163 | 1.26e-13 | 68.2 |
Msa1162290 | MtrunA17_Chr5g0398971 | 27.820 | 133 | 91 | 4 | 18 | 146 | 7 | 138 | 1.86e-13 | 67.8 |
Msa1162290 | MtrunA17_Chr1g0197351 | 33.077 | 130 | 78 | 5 | 18 | 142 | 42 | 167 | 1.96e-13 | 67.8 |
Msa1162290 | MtrunA17_Chr3g0130101 | 31.200 | 125 | 81 | 4 | 21 | 142 | 10 | 132 | 2.24e-13 | 67.4 |
Msa1162290 | MtrunA17_Chr3g0128111 | 32.000 | 125 | 80 | 4 | 21 | 142 | 45 | 167 | 2.90e-13 | 66.2 |
Msa1162290 | MtrunA17_Chr2g0318081 | 31.538 | 130 | 82 | 5 | 16 | 142 | 14 | 139 | 3.24e-13 | 67.0 |
Msa1162290 | MtrunA17_Chr5g0405211 | 30.233 | 129 | 84 | 5 | 18 | 142 | 8 | 134 | 1.05e-12 | 65.5 |
Msa1162290 | MtrunA17_Chr3g0092671 | 28.188 | 149 | 100 | 5 | 21 | 164 | 8 | 154 | 1.39e-12 | 65.5 |
Msa1162290 | MtrunA17_Chr2g0309331 | 30.075 | 133 | 88 | 4 | 16 | 144 | 8 | 139 | 1.51e-12 | 65.1 |
Msa1162290 | MtrunA17_Chr1g0200561 | 28.477 | 151 | 102 | 5 | 18 | 164 | 19 | 167 | 3.07e-12 | 64.3 |
Msa1162290 | MtrunA17_Chr8g0385991 | 28.395 | 162 | 101 | 8 | 17 | 169 | 13 | 168 | 3.56e-12 | 63.2 |
Msa1162290 | MtrunA17_Chr4g0076731 | 30.201 | 149 | 94 | 6 | 21 | 164 | 57 | 200 | 7.69e-12 | 63.2 |
Msa1162290 | MtrunA17_Chr4g0017921 | 32.824 | 131 | 82 | 6 | 18 | 144 | 8 | 136 | 1.96e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1162290 | AT3G10500.1 | 34.868 | 152 | 92 | 6 | 18 | 164 | 9 | 158 | 1.06e-21 | 92.4 |
Msa1162290 | AT5G13180.1 | 36.957 | 138 | 77 | 5 | 9 | 142 | 5 | 136 | 2.77e-21 | 88.2 |
Msa1162290 | AT5G04410.1 | 35.156 | 128 | 78 | 4 | 18 | 142 | 9 | 134 | 1.28e-20 | 89.4 |
Msa1162290 | AT3G03200.1 | 33.540 | 161 | 99 | 5 | 16 | 170 | 4 | 162 | 2.89e-20 | 88.2 |
Msa1162290 | AT5G17260.1 | 32.298 | 161 | 101 | 5 | 16 | 170 | 4 | 162 | 6.12e-20 | 87.0 |
Msa1162290 | AT3G17730.1 | 35.659 | 129 | 80 | 3 | 16 | 142 | 4 | 131 | 8.35e-20 | 84.3 |
Msa1162290 | AT1G65910.1 | 32.099 | 162 | 102 | 6 | 16 | 172 | 4 | 162 | 3.02e-19 | 85.5 |
Msa1162290 | AT1G54330.1 | 33.537 | 164 | 99 | 5 | 16 | 174 | 4 | 162 | 3.20e-19 | 83.6 |
Msa1162290 | AT5G39820.1 | 33.108 | 148 | 91 | 6 | 4 | 147 | 7 | 150 | 6.83e-19 | 83.2 |
Msa1162290 | AT2G24430.2 | 34.884 | 129 | 77 | 6 | 18 | 142 | 16 | 141 | 9.47e-19 | 82.4 |
Msa1162290 | AT2G24430.1 | 34.884 | 129 | 77 | 6 | 18 | 142 | 16 | 141 | 9.47e-19 | 82.4 |
Msa1162290 | AT3G12910.1 | 36.879 | 141 | 77 | 6 | 13 | 146 | 17 | 152 | 1.10e-18 | 82.4 |
Msa1162290 | AT1G76420.1 | 33.108 | 148 | 90 | 7 | 1 | 142 | 3 | 147 | 1.59e-18 | 82.0 |
Msa1162290 | AT1G61110.1 | 34.615 | 130 | 75 | 5 | 18 | 142 | 16 | 140 | 6.77e-18 | 80.5 |
Msa1162290 | AT3G04070.2 | 30.822 | 146 | 91 | 5 | 18 | 156 | 10 | 152 | 8.54e-18 | 80.1 |
Msa1162290 | AT2G33480.1 | 34.043 | 141 | 83 | 5 | 5 | 142 | 2 | 135 | 1.01e-17 | 79.0 |
Msa1162290 | AT2G33480.2 | 34.043 | 141 | 83 | 5 | 5 | 142 | 2 | 135 | 1.06e-17 | 79.0 |
Msa1162290 | AT3G04070.1 | 30.822 | 146 | 91 | 5 | 18 | 156 | 10 | 152 | 1.39e-17 | 79.7 |
Msa1162290 | AT5G07680.1 | 30.481 | 187 | 119 | 9 | 13 | 193 | 12 | 193 | 2.26e-17 | 79.0 |
Msa1162290 | AT5G07680.2 | 30.978 | 184 | 116 | 9 | 16 | 193 | 1 | 179 | 2.59e-17 | 78.6 |
Msa1162290 | AT1G01720.1 | 29.744 | 195 | 115 | 8 | 16 | 194 | 5 | 193 | 2.84e-17 | 78.2 |
Msa1162290 | AT5G14000.1 | 27.746 | 173 | 115 | 5 | 5 | 173 | 2 | 168 | 3.87e-17 | 76.3 |
Msa1162290 | AT5G08790.1 | 30.496 | 141 | 90 | 5 | 16 | 153 | 5 | 140 | 3.94e-17 | 77.8 |
Msa1162290 | AT1G77450.1 | 32.593 | 135 | 83 | 4 | 16 | 147 | 8 | 137 | 4.30e-17 | 77.0 |
Msa1162290 | AT2G43000.1 | 29.381 | 194 | 114 | 9 | 13 | 191 | 14 | 199 | 4.33e-17 | 77.4 |
Msa1162290 | AT1G26870.1 | 35.556 | 135 | 78 | 7 | 12 | 142 | 12 | 141 | 6.57e-17 | 78.2 |
Msa1162290 | AT5G18270.1 | 35.338 | 133 | 80 | 5 | 13 | 142 | 16 | 145 | 7.56e-17 | 77.4 |
Msa1162290 | AT5G63790.2 | 31.111 | 135 | 85 | 5 | 16 | 147 | 58 | 187 | 1.03e-16 | 77.0 |
Msa1162290 | AT5G63790.1 | 31.111 | 135 | 85 | 5 | 16 | 147 | 48 | 177 | 1.06e-16 | 77.0 |
Msa1162290 | AT3G10490.1 | 36.434 | 129 | 75 | 6 | 18 | 142 | 27 | 152 | 1.25e-16 | 75.5 |
Msa1162290 | AT5G18270.2 | 34.586 | 133 | 81 | 5 | 13 | 142 | 16 | 145 | 2.09e-16 | 76.3 |
Msa1162290 | AT3G15170.1 | 32.593 | 135 | 84 | 6 | 12 | 142 | 14 | 145 | 2.49e-16 | 75.9 |
Msa1162290 | AT5G53950.1 | 33.083 | 133 | 82 | 6 | 14 | 142 | 13 | 142 | 3.69e-16 | 75.9 |
Msa1162290 | AT3G10480.2 | 36.434 | 129 | 75 | 6 | 18 | 142 | 27 | 152 | 4.05e-16 | 76.3 |
Msa1162290 | AT3G10480.1 | 36.434 | 129 | 75 | 6 | 18 | 142 | 27 | 152 | 4.30e-16 | 75.9 |
Msa1162290 | AT5G61430.1 | 30.058 | 173 | 112 | 8 | 13 | 180 | 11 | 179 | 4.74e-16 | 75.5 |
Msa1162290 | AT2G27300.1 | 32.394 | 142 | 89 | 7 | 6 | 144 | 3 | 140 | 5.51e-16 | 75.1 |
Msa1162290 | AT1G34190.1 | 33.858 | 127 | 79 | 4 | 21 | 144 | 19 | 143 | 9.57e-16 | 75.1 |
Msa1162290 | AT1G34180.1 | 33.071 | 127 | 80 | 4 | 21 | 144 | 19 | 143 | 9.70e-16 | 75.1 |
Msa1162290 | AT5G14000.2 | 28.387 | 155 | 101 | 5 | 5 | 155 | 2 | 150 | 1.20e-15 | 71.2 |
Msa1162290 | AT3G10490.2 | 36.434 | 129 | 75 | 6 | 18 | 142 | 27 | 152 | 1.26e-15 | 74.7 |
Msa1162290 | AT3G29035.1 | 33.077 | 130 | 80 | 6 | 16 | 142 | 22 | 147 | 1.51e-15 | 73.9 |
Msa1162290 | AT3G15510.1 | 33.600 | 125 | 76 | 5 | 22 | 142 | 21 | 142 | 1.61e-15 | 73.9 |
Msa1162290 | AT1G34180.3 | 33.071 | 127 | 80 | 4 | 21 | 144 | 19 | 143 | 1.75e-15 | 74.3 |
Msa1162290 | AT5G39610.1 | 32.414 | 145 | 83 | 7 | 1 | 142 | 11 | 143 | 2.38e-15 | 72.8 |
Msa1162290 | AT5G46590.1 | 30.469 | 128 | 85 | 3 | 18 | 142 | 6 | 132 | 3.41e-15 | 72.4 |
Msa1162290 | AT5G46590.2 | 30.469 | 128 | 85 | 3 | 18 | 142 | 6 | 132 | 3.67e-15 | 72.4 |
Msa1162290 | AT5G66300.1 | 32.558 | 129 | 81 | 5 | 18 | 142 | 12 | 138 | 4.89e-15 | 72.0 |
Msa1162290 | AT4G17980.1 | 28.105 | 153 | 104 | 5 | 18 | 165 | 6 | 157 | 6.30e-15 | 71.2 |
Msa1162290 | AT1G69490.1 | 32.031 | 128 | 80 | 5 | 18 | 142 | 9 | 132 | 6.74e-15 | 71.2 |
Msa1162290 | AT3G04060.1 | 33.077 | 130 | 81 | 5 | 16 | 142 | 18 | 144 | 9.35e-15 | 71.6 |
Msa1162290 | AT4G35580.1 | 28.643 | 199 | 114 | 7 | 18 | 192 | 9 | 203 | 1.14e-14 | 72.0 |
Msa1162290 | AT4G35580.2 | 28.643 | 199 | 114 | 7 | 18 | 192 | 9 | 203 | 1.32e-14 | 71.6 |
Msa1162290 | AT4G35580.3 | 28.643 | 199 | 114 | 7 | 18 | 192 | 9 | 203 | 1.39e-14 | 71.6 |
Msa1162290 | AT4G17980.2 | 28.105 | 153 | 104 | 5 | 18 | 165 | 6 | 157 | 1.58e-14 | 70.9 |
Msa1162290 | AT1G79580.3 | 30.534 | 131 | 86 | 4 | 16 | 142 | 15 | 144 | 2.38e-14 | 70.9 |
Msa1162290 | AT1G79580.5 | 30.534 | 131 | 86 | 4 | 16 | 142 | 15 | 144 | 2.38e-14 | 70.9 |
Msa1162290 | AT1G79580.4 | 30.534 | 131 | 86 | 4 | 16 | 142 | 15 | 144 | 2.38e-14 | 70.9 |
Msa1162290 | AT1G79580.2 | 30.534 | 131 | 86 | 4 | 16 | 142 | 15 | 144 | 2.38e-14 | 70.9 |
Msa1162290 | AT1G79580.1 | 30.534 | 131 | 86 | 4 | 16 | 142 | 15 | 144 | 2.38e-14 | 70.9 |
Msa1162290 | AT5G24590.2 | 27.174 | 184 | 111 | 5 | 18 | 181 | 13 | 193 | 4.41e-14 | 70.1 |
Msa1162290 | AT3G12977.1 | 31.884 | 138 | 86 | 6 | 18 | 151 | 18 | 151 | 4.98e-14 | 69.3 |
Msa1162290 | AT4G27410.2 | 29.167 | 168 | 109 | 7 | 16 | 178 | 12 | 174 | 5.69e-14 | 69.3 |
Msa1162290 | AT5G62380.2 | 26.786 | 168 | 117 | 5 | 12 | 175 | 1 | 166 | 6.56e-14 | 69.3 |
Msa1162290 | AT5G62380.1 | 26.786 | 168 | 117 | 5 | 12 | 175 | 1 | 166 | 6.56e-14 | 69.3 |
Msa1162290 | AT1G12260.2 | 28.387 | 155 | 105 | 5 | 18 | 168 | 7 | 159 | 7.25e-14 | 69.3 |
Msa1162290 | AT1G33060.1 | 32.624 | 141 | 90 | 5 | 5 | 142 | 11 | 149 | 7.59e-14 | 69.7 |
Msa1162290 | AT1G33060.2 | 32.624 | 141 | 90 | 5 | 5 | 142 | 11 | 149 | 7.60e-14 | 69.7 |
Msa1162290 | AT1G12260.1 | 28.387 | 155 | 105 | 5 | 18 | 168 | 7 | 159 | 1.22e-13 | 68.9 |
Msa1162290 | AT1G62700.1 | 27.329 | 161 | 111 | 5 | 17 | 173 | 6 | 164 | 1.72e-13 | 68.6 |
Msa1162290 | AT1G62700.2 | 27.329 | 161 | 111 | 5 | 17 | 173 | 6 | 164 | 1.72e-13 | 68.6 |
Msa1162290 | AT1G52890.1 | 31.538 | 130 | 82 | 5 | 16 | 142 | 12 | 137 | 2.26e-13 | 67.8 |
Msa1162290 | AT4G36160.1 | 29.630 | 135 | 89 | 5 | 12 | 142 | 4 | 136 | 2.28e-13 | 67.8 |
Msa1162290 | AT4G36160.3 | 29.630 | 135 | 89 | 5 | 12 | 142 | 4 | 136 | 2.28e-13 | 67.8 |
Msa1162290 | AT4G36160.2 | 29.630 | 135 | 89 | 5 | 12 | 142 | 8 | 140 | 2.31e-13 | 67.8 |
Msa1162290 | AT1G02230.1 | 30.714 | 140 | 86 | 4 | 16 | 148 | 1 | 136 | 2.59e-13 | 67.8 |
Msa1162290 | AT1G34180.2 | 30.216 | 139 | 80 | 5 | 21 | 144 | 19 | 155 | 2.74e-13 | 68.2 |
Msa1162290 | AT3G18400.1 | 32.812 | 128 | 79 | 6 | 18 | 142 | 5 | 128 | 3.74e-13 | 67.0 |
Msa1162290 | AT1G34180.4 | 30.216 | 139 | 80 | 5 | 21 | 144 | 19 | 155 | 4.66e-13 | 67.4 |
Msa1162290 | AT3G15500.1 | 30.769 | 130 | 83 | 4 | 16 | 142 | 12 | 137 | 5.97e-13 | 66.6 |
Msa1162290 | AT5G09330.5 | 33.333 | 129 | 81 | 5 | 17 | 142 | 5 | 131 | 6.01e-13 | 67.0 |
Msa1162290 | AT5G09330.2 | 33.333 | 129 | 81 | 5 | 17 | 142 | 5 | 131 | 6.01e-13 | 67.0 |
Msa1162290 | AT5G09330.4 | 33.333 | 129 | 81 | 5 | 17 | 142 | 5 | 131 | 6.01e-13 | 67.0 |
Msa1162290 | AT5G09330.3 | 33.333 | 129 | 81 | 5 | 17 | 142 | 5 | 131 | 6.01e-13 | 67.0 |
Msa1162290 | AT5G09330.1 | 33.333 | 129 | 81 | 5 | 17 | 142 | 5 | 131 | 6.01e-13 | 67.0 |
Msa1162290 | AT1G71930.2 | 31.008 | 129 | 83 | 5 | 18 | 142 | 9 | 135 | 6.44e-13 | 66.2 |
Msa1162290 | AT1G71930.1 | 31.008 | 129 | 83 | 5 | 18 | 142 | 9 | 135 | 6.44e-13 | 66.2 |
Msa1162290 | AT2G18060.3 | 28.571 | 133 | 89 | 5 | 14 | 142 | 5 | 135 | 1.89e-12 | 65.1 |
Msa1162290 | AT2G18060.1 | 28.571 | 133 | 89 | 5 | 14 | 142 | 5 | 135 | 1.89e-12 | 65.1 |
Msa1162290 | AT1G32510.1 | 30.216 | 139 | 83 | 5 | 15 | 142 | 3 | 138 | 3.45e-12 | 63.9 |
Msa1162290 | AT4G28530.1 | 30.405 | 148 | 80 | 6 | 15 | 142 | 7 | 151 | 8.17e-12 | 63.5 |
Msa1162290 | AT4G27410.3 | 26.230 | 183 | 112 | 7 | 16 | 178 | 12 | 191 | 1.31e-11 | 62.8 |
Msa1162290 | AT4G01540.3 | 27.957 | 186 | 121 | 9 | 16 | 193 | 2 | 182 | 1.46e-11 | 62.8 |
Msa1162290 | AT4G01540.1 | 27.419 | 186 | 122 | 9 | 16 | 193 | 2 | 182 | 1.73e-11 | 62.8 |
Msa1162290 | AT4G01540.2 | 27.419 | 186 | 122 | 9 | 16 | 193 | 2 | 182 | 1.77e-11 | 62.8 |
Msa1162290 | AT4G01540.4 | 27.957 | 186 | 121 | 9 | 16 | 193 | 2 | 182 | 1.81e-11 | 62.4 |
Msa1162290 | AT3G49530.1 | 28.906 | 128 | 87 | 3 | 18 | 142 | 13 | 139 | 2.17e-11 | 62.4 |
Msa1162290 | AT1G33280.1 | 31.298 | 131 | 84 | 5 | 18 | 144 | 8 | 136 | 2.36e-11 | 62.0 |
Msa1162290 | AT3G49530.2 | 28.906 | 128 | 87 | 3 | 18 | 142 | 13 | 139 | 3.14e-11 | 62.0 |
Msa1162290 | AT4G10350.1 | 31.298 | 131 | 84 | 5 | 18 | 144 | 9 | 137 | 3.54e-11 | 61.6 |
Msa1162290 | AT1G32770.1 | 29.197 | 137 | 91 | 5 | 10 | 142 | 8 | 142 | 6.90e-11 | 60.8 |
Msa1162290 | AT5G64530.2 | 30.534 | 131 | 76 | 6 | 16 | 144 | 1 | 118 | 7.32e-11 | 58.5 |
Msa1162290 | AT1G32870.3 | 28.070 | 171 | 110 | 6 | 1 | 165 | 30 | 193 | 7.61e-11 | 60.8 |
Msa1162290 | AT1G32870.1 | 28.834 | 163 | 103 | 6 | 9 | 165 | 2 | 157 | 9.37e-11 | 60.5 |
Find 58 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGCATTGTCTTCAATTTAT+AGG | 0.223937 | 7_4:+52938392 | None:intergenic |
TGAAATTACCTGTTGGATTC+AGG | 0.250804 | 7_4:-52938263 | Msa1162290:CDS |
GAAAGAACACATTTGTTTAC+TGG | 0.255170 | 7_4:-52937768 | Msa1162290:CDS |
CTTCACTTGCTAAGAACTTT+TGG | 0.256930 | 7_4:-52938340 | Msa1162290:five_prime_UTR |
GGTACTATTTCTTTGATATC+AGG | 0.295817 | 7_4:-52937897 | Msa1162290:CDS |
GAACCGTAGGTTCGAAAATA+TGG | 0.299363 | 7_4:-52937875 | Msa1162290:CDS |
AAAGCATAGTGAGCTAGTTT+TGG | 0.338409 | 7_4:-52938295 | Msa1162290:CDS |
TCGAATTCTGACAGGACATT+TGG | 0.373254 | 7_4:+52938174 | None:intergenic |
AGAAATGAAACATGAGTTCA+TGG | 0.380575 | 7_4:+52937307 | None:intergenic |
CAGGAATTGAGGTTTGTGCT+TGG | 0.441832 | 7_4:-52937179 | Msa1162290:three_prime_UTR |
GAATTTAGTTGTAAGTCCTA+TGG | 0.472907 | 7_4:-52937233 | Msa1162290:three_prime_UTR |
TGAGTTCATGGAGAGGGAGG+AGG | 0.476558 | 7_4:+52937319 | None:intergenic |
TAATGCACATAATTAGTAAA+GGG | 0.477866 | 7_4:+52937108 | None:intergenic |
GGATCAAACCTGAATCCAAC+AGG | 0.478056 | 7_4:+52938255 | None:intergenic |
ATAATGCACATAATTAGTAA+AGG | 0.487078 | 7_4:+52937107 | None:intergenic |
AAATCAATCACTGTTGGTGT+GGG | 0.492009 | 7_4:+52937370 | None:intergenic |
ACAGGACATTTGGAAGAGGT+TGG | 0.514459 | 7_4:+52938184 | None:intergenic |
GAGTTCATGGAGAGGGAGGA+GGG | 0.516664 | 7_4:+52937320 | None:intergenic |
AATATGGATGCAAGAAGAGC+TGG | 0.518416 | 7_4:-52937859 | Msa1162290:CDS |
GAGCCATGGAAGCTGCCAAA+AGG | 0.533677 | 7_4:-52938138 | Msa1162290:intron |
GAAATCAATCACTGTTGGTG+TGG | 0.538024 | 7_4:+52937369 | None:intergenic |
GAAGAGCTGGAAATGGTGAA+TGG | 0.539470 | 7_4:-52937846 | Msa1162290:CDS |
AGTTCATGGAGAGGGAGGAG+GGG | 0.541559 | 7_4:+52937321 | None:intergenic |
TTTGTTTACTGGAGAATGCA+AGG | 0.541628 | 7_4:-52937757 | Msa1162290:CDS |
CTATCGGATATTTAAGATGA+AGG | 0.543622 | 7_4:-52937416 | Msa1162290:CDS |
GAGAGAGAAAGAGAGAGACT+AGG | 0.545275 | 7_4:+52938441 | None:intergenic |
TCTACAAGCTCATGATCAGT+TGG | 0.547810 | 7_4:+52938234 | None:intergenic |
GAAATACATCGAATTCTGAC+AGG | 0.551455 | 7_4:+52938166 | None:intergenic |
GGACCTCTTCAAAGCATATG+AGG | 0.554252 | 7_4:-52937918 | Msa1162290:CDS |
ATTGAGAATAATTGTTGTGT+GGG | 0.561181 | 7_4:-52937071 | Msa1162290:three_prime_UTR |
TCTGACAGGACATTTGGAAG+AGG | 0.561916 | 7_4:+52938180 | None:intergenic |
ATGTATTTCAAACTGAGCCA+TGG | 0.561975 | 7_4:-52938152 | Msa1162290:CDS |
TGAAACATGAGTTCATGGAG+AGG | 0.563520 | 7_4:+52937312 | None:intergenic |
GATGGTATGAAATTACCTGT+TGG | 0.565216 | 7_4:-52938270 | Msa1162290:CDS |
GATGCAAGAAGAGCTGGAAA+TGG | 0.566075 | 7_4:-52937853 | Msa1162290:CDS |
AATTGAGAATAATTGTTGTG+TGG | 0.569112 | 7_4:-52937072 | Msa1162290:three_prime_UTR |
ATCAATCACTGTTGGTGTGG+GGG | 0.572846 | 7_4:+52937372 | None:intergenic |
AAGCAACAATCAGCATCACT+TGG | 0.576110 | 7_4:+52937033 | None:intergenic |
ATGTAGGTGTACTCAGCTGT+AGG | 0.589112 | 7_4:-52937442 | Msa1162290:intron |
ACTCAGCTGTAGGTGCCTAT+CGG | 0.590616 | 7_4:-52937432 | Msa1162290:CDS |
GTACCTCATATGCTTTGAAG+AGG | 0.594155 | 7_4:+52937915 | None:intergenic |
TCTTTGATATCAGGAACCGT+AGG | 0.597083 | 7_4:-52937888 | Msa1162290:CDS |
AGAGACACTTGCATCTTCCA+TGG | 0.599268 | 7_4:+52937345 | None:intergenic |
CTTCATCTTAAATATCCGAT+AGG | 0.611455 | 7_4:+52937417 | None:intergenic |
ACATGAGTTCATGGAGAGGG+AGG | 0.614894 | 7_4:+52937316 | None:intergenic |
GTGAATGGAGAATATATGAG+AGG | 0.620604 | 7_4:-52937831 | Msa1162290:CDS |
GAAACATGAGTTCATGGAGA+GGG | 0.632009 | 7_4:+52937313 | None:intergenic |
AATCAATCACTGTTGGTGTG+GGG | 0.641402 | 7_4:+52937371 | None:intergenic |
TTGTAGATTATTATCTGACG+AGG | 0.656467 | 7_4:-52938218 | Msa1162290:CDS |
AGGATGCATGAATTTGTCAT+CGG | 0.657194 | 7_4:-52937706 | Msa1162290:CDS |
GTCAAGCTCTGATGACACAA+TGG | 0.657620 | 7_4:-52937729 | Msa1162290:CDS |
ATGGTGAAATCAATCACTGT+TGG | 0.663372 | 7_4:+52937364 | None:intergenic |
TCGGATATTTAAGATGAAGG+TGG | 0.674233 | 7_4:-52937413 | Msa1162290:CDS |
AACAGTGATTGATTTCACCA+TGG | 0.680653 | 7_4:-52937362 | Msa1162290:CDS |
GAGAATATATGAGAGGAACG+AGG | 0.682363 | 7_4:-52937824 | Msa1162290:CDS |
AAGCTCTGATGACACAATGG+AGG | 0.685488 | 7_4:-52937726 | Msa1162290:CDS |
CAAGTGAAGAAAGAGTTGTG+TGG | 0.710718 | 7_4:+52938354 | None:intergenic |
GTTTACTGGAGAATGCAAGG+AGG | 0.781160 | 7_4:-52937754 | Msa1162290:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAACTAAAAAAAAATATGA+TGG | + | chr7_4:52938263-52938282 | None:intergenic | 10.0% |
!! | TAAACTAAAAAAAAATATGA+TGG | + | chr7_4:52938263-52938282 | None:intergenic | 10.0% |
!! | ATCATAAGAAAAAGAATGAA+GGG | + | chr7_4:52937421-52937440 | None:intergenic | 20.0% |
!!! | ACACAAGGAAAATTTTAAAA+GGG | + | chr7_4:52937482-52937501 | None:intergenic | 20.0% |
!!! | AACACAAGGAAAATTTTAAA+AGG | + | chr7_4:52937483-52937502 | None:intergenic | 20.0% |
!! | CCATCATAAGATTAATTAAA+GGG | + | chr7_4:52937514-52937533 | None:intergenic | 20.0% |
!! | TCCATCATAAGATTAATTAA+AGG | + | chr7_4:52937515-52937534 | None:intergenic | 20.0% |
!!! | TACAATTTTTCATCAAACTA+AGG | - | chr7_4:52937835-52937854 | Msa1162290:CDS | 20.0% |
!!! | TTTGAAGTAATAATGTGTTT+TGG | - | chr7_4:52937945-52937964 | Msa1162290:intron | 20.0% |
!!! | TTTTGAACTCAAATTAATGT+AGG | - | chr7_4:52938060-52938079 | Msa1162290:intron | 20.0% |
!! | TAATGCACATAATTAGTAAA+GGG | + | chr7_4:52938413-52938432 | None:intergenic | 20.0% |
!! | ATAATGCACATAATTAGTAA+AGG | + | chr7_4:52938414-52938433 | None:intergenic | 20.0% |
!! | ATCATAAGAAAAAGAATGAA+GGG | + | chr7_4:52937421-52937440 | None:intergenic | 20.0% |
!!! | ACACAAGGAAAATTTTAAAA+GGG | + | chr7_4:52937482-52937501 | None:intergenic | 20.0% |
!!! | AACACAAGGAAAATTTTAAA+AGG | + | chr7_4:52937483-52937502 | None:intergenic | 20.0% |
!! | CCATCATAAGATTAATTAAA+GGG | + | chr7_4:52937514-52937533 | None:intergenic | 20.0% |
!! | TCCATCATAAGATTAATTAA+AGG | + | chr7_4:52937515-52937534 | None:intergenic | 20.0% |
!!! | TACAATTTTTCATCAAACTA+AGG | - | chr7_4:52937835-52937854 | Msa1162290:CDS | 20.0% |
!!! | TTTGAAGTAATAATGTGTTT+TGG | - | chr7_4:52937945-52937964 | Msa1162290:intron | 20.0% |
!!! | TTTTGAACTCAAATTAATGT+AGG | - | chr7_4:52938060-52938079 | Msa1162290:intron | 20.0% |
!! | TAATGCACATAATTAGTAAA+GGG | + | chr7_4:52938413-52938432 | None:intergenic | 20.0% |
!! | ATAATGCACATAATTAGTAA+AGG | + | chr7_4:52938414-52938433 | None:intergenic | 20.0% |
!! | AAGCATTGTCTTCAATTTAT+AGG | + | chr7_4:52937129-52937148 | None:intergenic | 25.0% |
!! | CTATAATTTCACAAACCTTT+TGG | + | chr7_4:52937398-52937417 | None:intergenic | 25.0% |
! | GATCATAAGAAAAAGAATGA+AGG | + | chr7_4:52937422-52937441 | None:intergenic | 25.0% |
! | CCCTTTAATTAATCTTATGA+TGG | - | chr7_4:52937511-52937530 | Msa1162290:intron | 25.0% |
!!! | ATTTGTTTTCTGCAGATAAT+AGG | - | chr7_4:52937579-52937598 | Msa1162290:intron | 25.0% |
!!! | AAACATGTTTTTTTGTCCAT+AGG | + | chr7_4:52938304-52938323 | None:intergenic | 25.0% |
!!! | GTTTTATCTTTCTAGTTTTC+AGG | - | chr7_4:52938320-52938339 | Msa1162290:exon | 25.0% |
! | AATTGAGAATAATTGTTGTG+TGG | - | chr7_4:52938446-52938465 | Msa1162290:five_prime_UTR | 25.0% |
! | ATTGAGAATAATTGTTGTGT+GGG | - | chr7_4:52938447-52938466 | Msa1162290:five_prime_UTR | 25.0% |
!! | AAGCATTGTCTTCAATTTAT+AGG | + | chr7_4:52937129-52937148 | None:intergenic | 25.0% |
!! | CTATAATTTCACAAACCTTT+TGG | + | chr7_4:52937398-52937417 | None:intergenic | 25.0% |
! | GATCATAAGAAAAAGAATGA+AGG | + | chr7_4:52937422-52937441 | None:intergenic | 25.0% |
! | CCCTTTAATTAATCTTATGA+TGG | - | chr7_4:52937511-52937530 | Msa1162290:intron | 25.0% |
!!! | ATTTGTTTTCTGCAGATAAT+AGG | - | chr7_4:52937579-52937598 | Msa1162290:intron | 25.0% |
!!! | AAACATGTTTTTTTGTCCAT+AGG | + | chr7_4:52938304-52938323 | None:intergenic | 25.0% |
!!! | GTTTTATCTTTCTAGTTTTC+AGG | - | chr7_4:52938320-52938339 | Msa1162290:exon | 25.0% |
! | AATTGAGAATAATTGTTGTG+TGG | - | chr7_4:52938446-52938465 | Msa1162290:five_prime_UTR | 25.0% |
! | ATTGAGAATAATTGTTGTGT+GGG | - | chr7_4:52938447-52938466 | Msa1162290:five_prime_UTR | 25.0% |
TTGTAGATTATTATCTGACG+AGG | - | chr7_4:52937300-52937319 | Msa1162290:three_prime_UTR | 30.0% | |
! | GGTACTATTTCTTTGATATC+AGG | - | chr7_4:52937621-52937640 | Msa1162290:intron | 30.0% |
GAAAGAACACATTTGTTTAC+TGG | - | chr7_4:52937750-52937769 | Msa1162290:CDS | 30.0% | |
!!! | TGCTAGTTTTATGCAAAAAG+TGG | - | chr7_4:52937987-52938006 | Msa1162290:intron | 30.0% |
CTTCATCTTAAATATCCGAT+AGG | + | chr7_4:52938104-52938123 | None:intergenic | 30.0% | |
! | CTATCGGATATTTAAGATGA+AGG | - | chr7_4:52938102-52938121 | Msa1162290:intron | 30.0% |
AGAAATGAAACATGAGTTCA+TGG | + | chr7_4:52938214-52938233 | None:intergenic | 30.0% | |
GAATTTAGTTGTAAGTCCTA+TGG | - | chr7_4:52938285-52938304 | Msa1162290:CDS | 30.0% | |
!!! | TTTCTAGTTTTCAGGAATTG+AGG | - | chr7_4:52938328-52938347 | Msa1162290:exon | 30.0% |
TTGTAGATTATTATCTGACG+AGG | - | chr7_4:52937300-52937319 | Msa1162290:three_prime_UTR | 30.0% | |
! | GGTACTATTTCTTTGATATC+AGG | - | chr7_4:52937621-52937640 | Msa1162290:intron | 30.0% |
GAAAGAACACATTTGTTTAC+TGG | - | chr7_4:52937750-52937769 | Msa1162290:CDS | 30.0% | |
!!! | TGCTAGTTTTATGCAAAAAG+TGG | - | chr7_4:52937987-52938006 | Msa1162290:intron | 30.0% |
CTTCATCTTAAATATCCGAT+AGG | + | chr7_4:52938104-52938123 | None:intergenic | 30.0% | |
! | CTATCGGATATTTAAGATGA+AGG | - | chr7_4:52938102-52938121 | Msa1162290:intron | 30.0% |
AGAAATGAAACATGAGTTCA+TGG | + | chr7_4:52938214-52938233 | None:intergenic | 30.0% | |
GAATTTAGTTGTAAGTCCTA+TGG | - | chr7_4:52938285-52938304 | Msa1162290:CDS | 30.0% | |
!!! | TTTCTAGTTTTCAGGAATTG+AGG | - | chr7_4:52938328-52938347 | Msa1162290:exon | 30.0% |
!! | CTTCACTTGCTAAGAACTTT+TGG | - | chr7_4:52937178-52937197 | Msa1162290:three_prime_UTR | 35.0% |
!! | AAAGCATAGTGAGCTAGTTT+TGG | - | chr7_4:52937223-52937242 | Msa1162290:three_prime_UTR | 35.0% |
GATGGTATGAAATTACCTGT+TGG | - | chr7_4:52937248-52937267 | Msa1162290:three_prime_UTR | 35.0% | |
TGAAATTACCTGTTGGATTC+AGG | - | chr7_4:52937255-52937274 | Msa1162290:three_prime_UTR | 35.0% | |
GAAATACATCGAATTCTGAC+AGG | + | chr7_4:52937355-52937374 | None:intergenic | 35.0% | |
ATGTATTTCAAACTGAGCCA+TGG | - | chr7_4:52937366-52937385 | Msa1162290:CDS | 35.0% | |
AAAGGGTTTCAAAGAACACA+AGG | + | chr7_4:52937497-52937516 | None:intergenic | 35.0% | |
! | CATCCATATTTTCGAACCTA+CGG | + | chr7_4:52937649-52937668 | None:intergenic | 35.0% |
GTGAATGGAGAATATATGAG+AGG | - | chr7_4:52937687-52937706 | Msa1162290:CDS | 35.0% | |
TTTGTTTACTGGAGAATGCA+AGG | - | chr7_4:52937761-52937780 | Msa1162290:CDS | 35.0% | |
AGGATGCATGAATTTGTCAT+CGG | - | chr7_4:52937812-52937831 | Msa1162290:CDS | 35.0% | |
!! | GAAGTATTGCTATCACTATG+AGG | - | chr7_4:52937916-52937935 | Msa1162290:CDS | 35.0% |
! | TCGGATATTTAAGATGAAGG+TGG | - | chr7_4:52938105-52938124 | Msa1162290:intron | 35.0% |
AAATCAATCACTGTTGGTGT+GGG | + | chr7_4:52938151-52938170 | None:intergenic | 35.0% | |
ATGGTGAAATCAATCACTGT+TGG | + | chr7_4:52938157-52938176 | None:intergenic | 35.0% | |
! | AACAGTGATTGATTTCACCA+TGG | - | chr7_4:52938156-52938175 | Msa1162290:CDS | 35.0% |
!! | CTTCACTTGCTAAGAACTTT+TGG | - | chr7_4:52937178-52937197 | Msa1162290:three_prime_UTR | 35.0% |
!! | AAAGCATAGTGAGCTAGTTT+TGG | - | chr7_4:52937223-52937242 | Msa1162290:three_prime_UTR | 35.0% |
GATGGTATGAAATTACCTGT+TGG | - | chr7_4:52937248-52937267 | Msa1162290:three_prime_UTR | 35.0% | |
TGAAATTACCTGTTGGATTC+AGG | - | chr7_4:52937255-52937274 | Msa1162290:three_prime_UTR | 35.0% | |
GAAATACATCGAATTCTGAC+AGG | + | chr7_4:52937355-52937374 | None:intergenic | 35.0% | |
ATGTATTTCAAACTGAGCCA+TGG | - | chr7_4:52937366-52937385 | Msa1162290:CDS | 35.0% | |
AAAGGGTTTCAAAGAACACA+AGG | + | chr7_4:52937497-52937516 | None:intergenic | 35.0% | |
! | CATCCATATTTTCGAACCTA+CGG | + | chr7_4:52937649-52937668 | None:intergenic | 35.0% |
GTGAATGGAGAATATATGAG+AGG | - | chr7_4:52937687-52937706 | Msa1162290:CDS | 35.0% | |
TTTGTTTACTGGAGAATGCA+AGG | - | chr7_4:52937761-52937780 | Msa1162290:CDS | 35.0% | |
AGGATGCATGAATTTGTCAT+CGG | - | chr7_4:52937812-52937831 | Msa1162290:CDS | 35.0% | |
!! | GAAGTATTGCTATCACTATG+AGG | - | chr7_4:52937916-52937935 | Msa1162290:CDS | 35.0% |
! | TCGGATATTTAAGATGAAGG+TGG | - | chr7_4:52938105-52938124 | Msa1162290:intron | 35.0% |
AAATCAATCACTGTTGGTGT+GGG | + | chr7_4:52938151-52938170 | None:intergenic | 35.0% | |
ATGGTGAAATCAATCACTGT+TGG | + | chr7_4:52938157-52938176 | None:intergenic | 35.0% | |
! | AACAGTGATTGATTTCACCA+TGG | - | chr7_4:52938156-52938175 | Msa1162290:CDS | 35.0% |
CAAGTGAAGAAAGAGTTGTG+TGG | + | chr7_4:52937167-52937186 | None:intergenic | 40.0% | |
!! | AGAACTTTTGGTGACAACCA+TGG | - | chr7_4:52937190-52937209 | Msa1162290:three_prime_UTR | 40.0% |
!!! | AGTGAGCTAGTTTTGGAAGA+TGG | - | chr7_4:52937230-52937249 | Msa1162290:three_prime_UTR | 40.0% |
TCTACAAGCTCATGATCAGT+TGG | + | chr7_4:52937287-52937306 | None:intergenic | 40.0% | |
TCGAATTCTGACAGGACATT+TGG | + | chr7_4:52937347-52937366 | None:intergenic | 40.0% | |
!! | GTACCTCATATGCTTTGAAG+AGG | + | chr7_4:52937606-52937625 | None:intergenic | 40.0% |
TCTTTGATATCAGGAACCGT+AGG | - | chr7_4:52937630-52937649 | Msa1162290:intron | 40.0% | |
GAACCGTAGGTTCGAAAATA+TGG | - | chr7_4:52937643-52937662 | Msa1162290:intron | 40.0% | |
AATATGGATGCAAGAAGAGC+TGG | - | chr7_4:52937659-52937678 | Msa1162290:intron | 40.0% | |
GAGAATATATGAGAGGAACG+AGG | - | chr7_4:52937694-52937713 | Msa1162290:CDS | 40.0% | |
AATCAATCACTGTTGGTGTG+GGG | + | chr7_4:52938150-52938169 | None:intergenic | 40.0% | |
GAAATCAATCACTGTTGGTG+TGG | + | chr7_4:52938152-52938171 | None:intergenic | 40.0% | |
GAAACATGAGTTCATGGAGA+GGG | + | chr7_4:52938208-52938227 | None:intergenic | 40.0% | |
TGAAACATGAGTTCATGGAG+AGG | + | chr7_4:52938209-52938228 | None:intergenic | 40.0% | |
CAAGTGAAGAAAGAGTTGTG+TGG | + | chr7_4:52937167-52937186 | None:intergenic | 40.0% | |
!! | AGAACTTTTGGTGACAACCA+TGG | - | chr7_4:52937190-52937209 | Msa1162290:three_prime_UTR | 40.0% |
!!! | AGTGAGCTAGTTTTGGAAGA+TGG | - | chr7_4:52937230-52937249 | Msa1162290:three_prime_UTR | 40.0% |
TCTACAAGCTCATGATCAGT+TGG | + | chr7_4:52937287-52937306 | None:intergenic | 40.0% | |
TCGAATTCTGACAGGACATT+TGG | + | chr7_4:52937347-52937366 | None:intergenic | 40.0% | |
!! | GTACCTCATATGCTTTGAAG+AGG | + | chr7_4:52937606-52937625 | None:intergenic | 40.0% |
TCTTTGATATCAGGAACCGT+AGG | - | chr7_4:52937630-52937649 | Msa1162290:intron | 40.0% | |
GAACCGTAGGTTCGAAAATA+TGG | - | chr7_4:52937643-52937662 | Msa1162290:intron | 40.0% | |
AATATGGATGCAAGAAGAGC+TGG | - | chr7_4:52937659-52937678 | Msa1162290:intron | 40.0% | |
GAGAATATATGAGAGGAACG+AGG | - | chr7_4:52937694-52937713 | Msa1162290:CDS | 40.0% | |
AATCAATCACTGTTGGTGTG+GGG | + | chr7_4:52938150-52938169 | None:intergenic | 40.0% | |
GAAATCAATCACTGTTGGTG+TGG | + | chr7_4:52938152-52938171 | None:intergenic | 40.0% | |
GAAACATGAGTTCATGGAGA+GGG | + | chr7_4:52938208-52938227 | None:intergenic | 40.0% | |
TGAAACATGAGTTCATGGAG+AGG | + | chr7_4:52938209-52938228 | None:intergenic | 40.0% | |
GAGAGAGAAAGAGAGAGACT+AGG | + | chr7_4:52937080-52937099 | None:intergenic | 45.0% | |
! | ATGCTTTTCATCAGCAGCCA+TGG | + | chr7_4:52937210-52937229 | None:intergenic | 45.0% |
GGATCAAACCTGAATCCAAC+AGG | + | chr7_4:52937266-52937285 | None:intergenic | 45.0% | |
ACAGGACATTTGGAAGAGGT+TGG | + | chr7_4:52937337-52937356 | None:intergenic | 45.0% | |
TCTGACAGGACATTTGGAAG+AGG | + | chr7_4:52937341-52937360 | None:intergenic | 45.0% | |
! | AAACCTTTTGGCAGCTTCCA+TGG | + | chr7_4:52937386-52937405 | None:intergenic | 45.0% |
GGACCTCTTCAAAGCATATG+AGG | - | chr7_4:52937600-52937619 | Msa1162290:intron | 45.0% | |
GATGCAAGAAGAGCTGGAAA+TGG | - | chr7_4:52937665-52937684 | Msa1162290:intron | 45.0% | |
GAAGAGCTGGAAATGGTGAA+TGG | - | chr7_4:52937672-52937691 | Msa1162290:intron | 45.0% | |
GTTTACTGGAGAATGCAAGG+AGG | - | chr7_4:52937764-52937783 | Msa1162290:CDS | 45.0% | |
! | GTCAAGCTCTGATGACACAA+TGG | - | chr7_4:52937789-52937808 | Msa1162290:CDS | 45.0% |
! | AAGCTCTGATGACACAATGG+AGG | - | chr7_4:52937792-52937811 | Msa1162290:CDS | 45.0% |
ATGTAGGTGTACTCAGCTGT+AGG | - | chr7_4:52938076-52938095 | Msa1162290:intron | 45.0% | |
ATCAATCACTGTTGGTGTGG+GGG | + | chr7_4:52938149-52938168 | None:intergenic | 45.0% | |
AGAGACACTTGCATCTTCCA+TGG | + | chr7_4:52938176-52938195 | None:intergenic | 45.0% | |
CAGGAATTGAGGTTTGTGCT+TGG | - | chr7_4:52938339-52938358 | Msa1162290:five_prime_UTR | 45.0% | |
GAGAGAGAAAGAGAGAGACT+AGG | + | chr7_4:52937080-52937099 | None:intergenic | 45.0% | |
! | ATGCTTTTCATCAGCAGCCA+TGG | + | chr7_4:52937210-52937229 | None:intergenic | 45.0% |
GGATCAAACCTGAATCCAAC+AGG | + | chr7_4:52937266-52937285 | None:intergenic | 45.0% | |
ACAGGACATTTGGAAGAGGT+TGG | + | chr7_4:52937337-52937356 | None:intergenic | 45.0% | |
TCTGACAGGACATTTGGAAG+AGG | + | chr7_4:52937341-52937360 | None:intergenic | 45.0% | |
! | AAACCTTTTGGCAGCTTCCA+TGG | + | chr7_4:52937386-52937405 | None:intergenic | 45.0% |
GGACCTCTTCAAAGCATATG+AGG | - | chr7_4:52937600-52937619 | Msa1162290:intron | 45.0% | |
GATGCAAGAAGAGCTGGAAA+TGG | - | chr7_4:52937665-52937684 | Msa1162290:intron | 45.0% | |
GAAGAGCTGGAAATGGTGAA+TGG | - | chr7_4:52937672-52937691 | Msa1162290:intron | 45.0% | |
GTTTACTGGAGAATGCAAGG+AGG | - | chr7_4:52937764-52937783 | Msa1162290:CDS | 45.0% | |
! | GTCAAGCTCTGATGACACAA+TGG | - | chr7_4:52937789-52937808 | Msa1162290:CDS | 45.0% |
! | AAGCTCTGATGACACAATGG+AGG | - | chr7_4:52937792-52937811 | Msa1162290:CDS | 45.0% |
ATGTAGGTGTACTCAGCTGT+AGG | - | chr7_4:52938076-52938095 | Msa1162290:intron | 45.0% | |
ATCAATCACTGTTGGTGTGG+GGG | + | chr7_4:52938149-52938168 | None:intergenic | 45.0% | |
AGAGACACTTGCATCTTCCA+TGG | + | chr7_4:52938176-52938195 | None:intergenic | 45.0% | |
CAGGAATTGAGGTTTGTGCT+TGG | - | chr7_4:52938339-52938358 | Msa1162290:five_prime_UTR | 45.0% | |
ACTCAGCTGTAGGTGCCTAT+CGG | - | chr7_4:52938086-52938105 | Msa1162290:intron | 50.0% | |
ACATGAGTTCATGGAGAGGG+AGG | + | chr7_4:52938205-52938224 | None:intergenic | 50.0% | |
ACTCAGCTGTAGGTGCCTAT+CGG | - | chr7_4:52938086-52938105 | Msa1162290:intron | 50.0% | |
ACATGAGTTCATGGAGAGGG+AGG | + | chr7_4:52938205-52938224 | None:intergenic | 50.0% | |
GAGCCATGGAAGCTGCCAAA+AGG | - | chr7_4:52937380-52937399 | Msa1162290:CDS | 55.0% | |
AGTTCATGGAGAGGGAGGAG+GGG | + | chr7_4:52938200-52938219 | None:intergenic | 55.0% | |
GAGTTCATGGAGAGGGAGGA+GGG | + | chr7_4:52938201-52938220 | None:intergenic | 55.0% | |
TGAGTTCATGGAGAGGGAGG+AGG | + | chr7_4:52938202-52938221 | None:intergenic | 55.0% | |
GAGCCATGGAAGCTGCCAAA+AGG | - | chr7_4:52937380-52937399 | Msa1162290:CDS | 55.0% | |
AGTTCATGGAGAGGGAGGAG+GGG | + | chr7_4:52938200-52938219 | None:intergenic | 55.0% | |
GAGTTCATGGAGAGGGAGGA+GGG | + | chr7_4:52938201-52938220 | None:intergenic | 55.0% | |
TGAGTTCATGGAGAGGGAGG+AGG | + | chr7_4:52938202-52938221 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 52937036 | 52938504 | 52937036 | ID=Msa1162290;Name=Msa1162290 |
chr7_4 | mRNA | 52937036 | 52938504 | 52937036 | ID=Msa1162290-mRNA-1;Parent=Msa1162290;Name=Msa1162290-mRNA-1;_AED=0.08;_eAED=0.08;_QI=173|1|1|1|1|1|3|288|196 |
chr7_4 | exon | 52937036 | 52937458 | 52937036 | ID=Msa1162290-mRNA-1:exon:15257;Parent=Msa1162290-mRNA-1 |
chr7_4 | exon | 52937684 | 52937946 | 52937684 | ID=Msa1162290-mRNA-1:exon:15256;Parent=Msa1162290-mRNA-1 |
chr7_4 | exon | 52938139 | 52938504 | 52938139 | ID=Msa1162290-mRNA-1:exon:15255;Parent=Msa1162290-mRNA-1 |
chr7_4 | five_prime_UTR | 52938332 | 52938504 | 52938332 | ID=Msa1162290-mRNA-1:five_prime_utr;Parent=Msa1162290-mRNA-1 |
chr7_4 | CDS | 52938139 | 52938331 | 52938139 | ID=Msa1162290-mRNA-1:cds;Parent=Msa1162290-mRNA-1 |
chr7_4 | CDS | 52937684 | 52937946 | 52937684 | ID=Msa1162290-mRNA-1:cds;Parent=Msa1162290-mRNA-1 |
chr7_4 | CDS | 52937324 | 52937458 | 52937324 | ID=Msa1162290-mRNA-1:cds;Parent=Msa1162290-mRNA-1 |
chr7_4 | three_prime_UTR | 52937036 | 52937323 | 52937036 | ID=Msa1162290-mRNA-1:three_prime_utr;Parent=Msa1162290-mRNA-1 |
Gene Sequence |
Protein sequence |