Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162350 | XP_003625199.1 | 89.752 | 322 | 23 | 3 | 1 | 315 | 1 | 319 | 0.0 | 586 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162350 | sp|Q66GR3|BH130_ARATH | 48.133 | 241 | 106 | 6 | 84 | 315 | 125 | 355 | 5.53e-49 | 170 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162350 | G7KUF7 | 89.752 | 322 | 23 | 3 | 1 | 315 | 1 | 319 | 0.0 | 586 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1162350 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162350 | MtrunA17_Chr7g0258181 | 89.752 | 322 | 23 | 3 | 1 | 315 | 1 | 319 | 0.0 | 586 |
| Msa1162350 | MtrunA17_Chr1g0174271 | 46.505 | 372 | 128 | 9 | 4 | 311 | 6 | 370 | 8.07e-85 | 260 |
| Msa1162350 | MtrunA17_Chr4g0032951 | 39.015 | 264 | 126 | 6 | 81 | 315 | 174 | 431 | 2.17e-50 | 172 |
| Msa1162350 | MtrunA17_Chr2g0329041 | 43.137 | 255 | 119 | 8 | 83 | 315 | 157 | 407 | 8.99e-48 | 165 |
| Msa1162350 | MtrunA17_Chr3g0087771 | 38.618 | 246 | 112 | 6 | 88 | 311 | 166 | 394 | 4.69e-42 | 150 |
| Msa1162350 | MtrunA17_Chr8g0351881 | 39.200 | 250 | 111 | 5 | 88 | 311 | 154 | 388 | 2.51e-35 | 131 |
| Msa1162350 | MtrunA17_Chr4g0014771 | 69.620 | 79 | 24 | 0 | 233 | 311 | 112 | 190 | 1.64e-33 | 122 |
| Msa1162350 | MtrunA17_Chr1g0152131 | 52.113 | 71 | 34 | 0 | 239 | 309 | 260 | 330 | 4.61e-16 | 78.2 |
| Msa1162350 | MtrunA17_Chr4g0074161 | 54.412 | 68 | 30 | 1 | 239 | 306 | 206 | 272 | 5.53e-16 | 78.2 |
| Msa1162350 | MtrunA17_Chr1g0190731 | 50.667 | 75 | 36 | 1 | 232 | 306 | 186 | 259 | 1.09e-15 | 76.6 |
| Msa1162350 | MtrunA17_Chr5g0421111 | 50.000 | 74 | 37 | 0 | 239 | 312 | 365 | 438 | 2.12e-15 | 76.6 |
| Msa1162350 | MtrunA17_Chr3g0131771 | 53.731 | 67 | 31 | 0 | 239 | 305 | 147 | 213 | 3.50e-15 | 75.1 |
| Msa1162350 | MtrunA17_Chr7g0234761 | 48.649 | 74 | 38 | 0 | 239 | 312 | 317 | 390 | 5.45e-15 | 75.5 |
| Msa1162350 | MtrunA17_Chr3g0144641 | 50.000 | 74 | 37 | 0 | 239 | 312 | 191 | 264 | 1.00e-14 | 74.3 |
| Msa1162350 | MtrunA17_Chr8g0365941 | 50.725 | 69 | 34 | 0 | 239 | 307 | 305 | 373 | 2.23e-14 | 73.6 |
| Msa1162350 | MtrunA17_Chr8g0339091 | 45.946 | 74 | 40 | 0 | 239 | 312 | 291 | 364 | 2.63e-14 | 73.2 |
| Msa1162350 | MtrunA17_Chr8g0385911 | 49.275 | 69 | 35 | 0 | 239 | 307 | 145 | 213 | 9.01e-14 | 70.9 |
| Msa1162350 | MtrunA17_Chr4g0035101 | 45.679 | 81 | 42 | 1 | 232 | 312 | 138 | 216 | 9.42e-14 | 70.9 |
| Msa1162350 | MtrunA17_Chr8g0363921 | 47.761 | 67 | 35 | 0 | 239 | 305 | 151 | 217 | 6.21e-13 | 67.8 |
| Msa1162350 | MtrunA17_Chr7g0258161 | 41.892 | 74 | 43 | 0 | 239 | 312 | 173 | 246 | 1.06e-11 | 64.7 |
| Msa1162350 | MtrunA17_Chr5g0415291 | 46.269 | 67 | 36 | 0 | 239 | 305 | 112 | 178 | 1.17e-11 | 63.5 |
| Msa1162350 | MtrunA17_Chr1g0152651 | 53.846 | 65 | 29 | 1 | 240 | 304 | 275 | 338 | 2.62e-11 | 63.9 |
| Msa1162350 | MtrunA17_Chr6g0484271 | 46.269 | 67 | 36 | 0 | 239 | 305 | 155 | 221 | 2.97e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1162350 | AT2G42280.1 | 48.133 | 241 | 106 | 6 | 84 | 315 | 125 | 355 | 5.62e-50 | 170 |
| Msa1162350 | AT2G42280.3 | 48.458 | 227 | 98 | 6 | 84 | 301 | 125 | 341 | 6.32e-44 | 154 |
| Msa1162350 | AT1G51140.1 | 40.083 | 242 | 110 | 8 | 89 | 311 | 151 | 376 | 1.46e-40 | 145 |
| Msa1162350 | AT2G43140.1 | 57.143 | 105 | 44 | 1 | 208 | 311 | 102 | 206 | 7.01e-35 | 126 |
| Msa1162350 | AT2G43140.2 | 57.143 | 105 | 44 | 1 | 208 | 311 | 199 | 303 | 2.53e-34 | 127 |
| Msa1162350 | AT1G35460.1 | 61.176 | 85 | 33 | 0 | 231 | 315 | 173 | 257 | 3.08e-32 | 120 |
| Msa1162350 | AT1G05805.1 | 56.731 | 104 | 43 | 2 | 209 | 311 | 253 | 355 | 9.47e-31 | 119 |
| Msa1162350 | AT4G09180.1 | 59.341 | 91 | 35 | 1 | 225 | 315 | 172 | 260 | 3.87e-30 | 115 |
| Msa1162350 | AT1G35460.2 | 76.596 | 47 | 11 | 0 | 231 | 277 | 173 | 219 | 4.56e-18 | 82.0 |
| Msa1162350 | AT2G24260.2 | 50.000 | 78 | 38 | 1 | 229 | 306 | 25 | 101 | 2.86e-16 | 77.4 |
| Msa1162350 | AT5G58010.1 | 54.412 | 68 | 30 | 1 | 239 | 306 | 99 | 165 | 4.64e-16 | 77.4 |
| Msa1162350 | AT2G42280.2 | 40.110 | 182 | 90 | 6 | 84 | 256 | 125 | 296 | 4.94e-16 | 77.4 |
| Msa1162350 | AT2G24260.1 | 55.882 | 68 | 29 | 1 | 239 | 306 | 138 | 204 | 6.84e-16 | 77.8 |
| Msa1162350 | AT4G30980.1 | 54.412 | 68 | 30 | 1 | 239 | 306 | 130 | 196 | 1.79e-15 | 76.3 |
| Msa1162350 | AT4G30980.2 | 54.412 | 68 | 30 | 1 | 239 | 306 | 178 | 244 | 2.30e-15 | 76.3 |
| Msa1162350 | AT1G10120.2 | 53.623 | 69 | 32 | 0 | 239 | 307 | 206 | 274 | 4.43e-15 | 75.5 |
| Msa1162350 | AT1G10120.1 | 53.623 | 69 | 32 | 0 | 239 | 307 | 206 | 274 | 4.43e-15 | 75.5 |
| Msa1162350 | AT4G34530.1 | 48.649 | 74 | 38 | 0 | 239 | 312 | 172 | 245 | 6.86e-15 | 74.7 |
| Msa1162350 | AT5G50915.3 | 53.731 | 67 | 31 | 0 | 239 | 305 | 136 | 202 | 1.08e-14 | 73.2 |
| Msa1162350 | AT5G50915.4 | 53.731 | 67 | 31 | 0 | 239 | 305 | 136 | 202 | 1.08e-14 | 73.2 |
| Msa1162350 | AT1G68920.3 | 49.296 | 71 | 36 | 0 | 239 | 309 | 302 | 372 | 1.08e-14 | 74.7 |
| Msa1162350 | AT5G50915.1 | 53.731 | 67 | 31 | 0 | 239 | 305 | 136 | 202 | 1.10e-14 | 73.6 |
| Msa1162350 | AT5G50915.2 | 53.731 | 67 | 31 | 0 | 239 | 305 | 136 | 202 | 1.10e-14 | 73.6 |
| Msa1162350 | AT1G68920.1 | 49.296 | 71 | 36 | 0 | 239 | 309 | 303 | 373 | 1.11e-14 | 74.7 |
| Msa1162350 | AT1G68920.4 | 49.296 | 71 | 36 | 0 | 239 | 309 | 303 | 373 | 1.11e-14 | 74.7 |
| Msa1162350 | AT1G68920.2 | 49.296 | 71 | 36 | 0 | 239 | 309 | 303 | 373 | 1.11e-14 | 74.7 |
| Msa1162350 | AT3G07340.1 | 47.297 | 74 | 39 | 0 | 239 | 312 | 258 | 331 | 3.52e-14 | 73.2 |
| Msa1162350 | AT3G07340.2 | 47.297 | 74 | 39 | 0 | 239 | 312 | 258 | 331 | 3.75e-14 | 73.2 |
| Msa1162350 | AT1G26260.4 | 52.239 | 67 | 32 | 0 | 239 | 305 | 223 | 289 | 5.52e-14 | 72.4 |
| Msa1162350 | AT1G26260.1 | 52.239 | 67 | 32 | 0 | 239 | 305 | 223 | 289 | 5.52e-14 | 72.4 |
| Msa1162350 | AT1G26260.6 | 52.239 | 67 | 32 | 0 | 239 | 305 | 223 | 289 | 5.52e-14 | 72.4 |
| Msa1162350 | AT1G26260.2 | 52.239 | 67 | 32 | 0 | 239 | 305 | 223 | 289 | 5.52e-14 | 72.4 |
| Msa1162350 | AT1G26260.5 | 52.239 | 67 | 32 | 0 | 239 | 305 | 201 | 267 | 5.95e-14 | 72.0 |
| Msa1162350 | AT1G26260.3 | 52.239 | 67 | 32 | 0 | 239 | 305 | 172 | 238 | 6.11e-14 | 72.0 |
| Msa1162350 | AT1G25330.1 | 47.761 | 67 | 35 | 0 | 239 | 305 | 104 | 170 | 9.65e-14 | 69.7 |
| Msa1162350 | AT5G48560.1 | 49.254 | 67 | 34 | 0 | 239 | 305 | 301 | 367 | 2.92e-13 | 70.5 |
| Msa1162350 | AT5G48560.2 | 49.254 | 67 | 34 | 0 | 239 | 305 | 301 | 367 | 3.12e-13 | 70.5 |
| Msa1162350 | AT4G36540.2 | 46.753 | 77 | 39 | 1 | 229 | 305 | 133 | 207 | 3.28e-13 | 69.3 |
| Msa1162350 | AT4G36540.1 | 46.753 | 77 | 39 | 1 | 229 | 305 | 133 | 207 | 3.43e-13 | 69.3 |
| Msa1162350 | AT3G23690.1 | 45.946 | 74 | 40 | 0 | 239 | 312 | 191 | 264 | 4.06e-13 | 69.7 |
| Msa1162350 | AT1G18400.2 | 47.761 | 67 | 35 | 0 | 239 | 305 | 145 | 211 | 1.79e-12 | 66.6 |
| Msa1162350 | AT2G18300.2 | 47.826 | 69 | 36 | 0 | 239 | 307 | 185 | 253 | 2.49e-12 | 67.0 |
| Msa1162350 | AT2G18300.1 | 47.826 | 69 | 36 | 0 | 239 | 307 | 185 | 253 | 2.51e-12 | 67.0 |
| Msa1162350 | AT1G59640.1 | 47.761 | 67 | 35 | 0 | 239 | 305 | 136 | 202 | 3.14e-12 | 66.2 |
| Msa1162350 | AT1G18400.1 | 47.761 | 67 | 35 | 0 | 239 | 305 | 145 | 211 | 3.15e-12 | 66.2 |
| Msa1162350 | AT2G18300.3 | 47.826 | 69 | 36 | 0 | 239 | 307 | 185 | 253 | 3.35e-12 | 67.0 |
| Msa1162350 | AT1G73830.2 | 46.269 | 67 | 36 | 0 | 239 | 305 | 147 | 213 | 3.64e-12 | 65.9 |
| Msa1162350 | AT3G57800.2 | 43.243 | 74 | 42 | 0 | 239 | 312 | 204 | 277 | 3.76e-12 | 67.0 |
| Msa1162350 | AT2G42300.1 | 43.243 | 74 | 42 | 0 | 239 | 312 | 185 | 258 | 3.79e-12 | 66.6 |
| Msa1162350 | AT1G73830.1 | 46.269 | 67 | 36 | 0 | 239 | 305 | 147 | 213 | 3.89e-12 | 65.9 |
| Msa1162350 | AT2G42300.4 | 43.243 | 74 | 42 | 0 | 239 | 312 | 185 | 258 | 5.96e-12 | 65.5 |
| Msa1162350 | AT1G59640.2 | 47.761 | 67 | 35 | 0 | 239 | 305 | 136 | 202 | 1.05e-11 | 65.5 |
| Msa1162350 | AT5G62610.2 | 46.269 | 67 | 36 | 0 | 239 | 305 | 153 | 219 | 1.83e-11 | 63.9 |
| Msa1162350 | AT5G62610.1 | 46.269 | 67 | 36 | 0 | 239 | 305 | 153 | 219 | 1.83e-11 | 63.9 |
| Msa1162350 | AT2G14760.1 | 53.846 | 65 | 29 | 1 | 240 | 304 | 238 | 301 | 3.61e-11 | 63.5 |
Find 56 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACGAAGCAACCTTGAATT+TGG | 0.214893 | 7_4:-53030209 | None:intergenic |
| TTGTCACCTTTATGATTAAA+AGG | 0.243027 | 7_4:-53030320 | None:intergenic |
| CTCAAGGAAGAAGGACTTCT+TGG | 0.270896 | 7_4:-53031381 | None:intergenic |
| CTTTATGATTAAAAGGATTA+TGG | 0.272914 | 7_4:-53030313 | None:intergenic |
| ATCTACCTTTAGAGAATTCA+TGG | 0.283481 | 7_4:+53030289 | Msa1162350:CDS |
| AACATATTGAACAATCAAAT+TGG | 0.290694 | 7_4:+53031351 | Msa1162350:CDS |
| ACCCTTTCGGCAAGGCTTCT+AGG | 0.305032 | 7_4:-53031778 | None:intergenic |
| ATACTGCTTGGAACAGAATC+TGG | 0.326173 | 7_4:-53031727 | None:intergenic |
| CCGAGTTCTTCTTACCCTTT+CGG | 0.326997 | 7_4:-53031791 | None:intergenic |
| ATTCTGACCTTATCAATGTT+TGG | 0.350513 | 7_4:-53031850 | None:intergenic |
| GAAGGTTGTGCTACAAATTC+TGG | 0.353997 | 7_4:+53030254 | Msa1162350:CDS |
| CATTTATGATTCTAATGATA+AGG | 0.362189 | 7_4:+53031515 | Msa1162350:CDS |
| AATGACGATGCTCAACATTA+TGG | 0.392898 | 7_4:+53031483 | Msa1162350:CDS |
| AACAACAACATCATCTCCTT+TGG | 0.393746 | 7_4:+53030473 | Msa1162350:CDS |
| GAATGTAGGGGTACGAAATC+AGG | 0.393810 | 7_4:+53031627 | Msa1162350:intron |
| TCCTAGAAGCCTTGCCGAAA+GGG | 0.399735 | 7_4:+53031777 | Msa1162350:CDS |
| CTCTTTGCTCTGATACTGCT+TGG | 0.399999 | 7_4:-53031739 | None:intergenic |
| AACATCATCTCCTTTGGAAA+TGG | 0.414195 | 7_4:+53030479 | Msa1162350:CDS |
| TTCTGTTATACTCAGAATGT+AGG | 0.435545 | 7_4:+53031613 | Msa1162350:intron |
| ACCACTCTGTCTTAAAAGAT+TGG | 0.442108 | 7_4:-53030429 | None:intergenic |
| AACAAAACCAACCAAATTCA+AGG | 0.457834 | 7_4:+53030198 | Msa1162350:CDS |
| AAAGGAGATGATGTTGTTGT+TGG | 0.459546 | 7_4:-53030471 | None:intergenic |
| GATTGTTCCAAACATTGATA+AGG | 0.462084 | 7_4:+53031843 | Msa1162350:CDS |
| TCTGTTATACTCAGAATGTA+GGG | 0.472612 | 7_4:+53031614 | Msa1162350:intron |
| AGACAGAGTGGTTCCCATGC+TGG | 0.479729 | 7_4:+53030440 | Msa1162350:CDS |
| AAAGGTGTTGAAAACTATGA+TGG | 0.487777 | 7_4:+53031291 | Msa1162350:CDS |
| TTCTCAGCAGGGTTGTAGAA+TGG | 0.494908 | 7_4:+53030385 | Msa1162350:CDS |
| CACATCAGAAATGTTAGACT+TGG | 0.499859 | 7_4:+53031969 | Msa1162350:CDS |
| AAGACACATGAATTCTCAGC+AGG | 0.502231 | 7_4:+53030373 | Msa1162350:CDS |
| ATCATCAGAAATGTTTGTTG+TGG | 0.510623 | 7_4:+53031687 | Msa1162350:CDS |
| GAAGCAACCTTGAATTTGGT+TGG | 0.517186 | 7_4:-53030205 | None:intergenic |
| AACTCTAACATGGGGAGTGA+TGG | 0.529452 | 7_4:+53031417 | Msa1162350:CDS |
| GTTAACATTCTCAAGGAAGA+AGG | 0.536765 | 7_4:-53031390 | None:intergenic |
| ATCCTAGAAGCCTTGCCGAA+AGG | 0.543719 | 7_4:+53031776 | Msa1162350:CDS |
| ATGGTCCATGAATTCTCTAA+AGG | 0.546307 | 7_4:-53030294 | None:intergenic |
| TTCTTCTTACCCTTTCGGCA+AGG | 0.550067 | 7_4:-53031786 | None:intergenic |
| TCAAGTTTCAAACAAGCTGA+AGG | 0.555684 | 7_4:+53030236 | Msa1162350:CDS |
| CCGAAAGGGTAAGAAGAACT+CGG | 0.565752 | 7_4:+53031791 | Msa1162350:CDS |
| TTAACACAGAACTCTAACAT+GGG | 0.570842 | 7_4:+53031408 | Msa1162350:CDS |
| GTTCTGTGTTAACATTCTCA+AGG | 0.582732 | 7_4:-53031397 | None:intergenic |
| CGTGATGATCGAAGACAAGT+AGG | 0.588275 | 7_4:+53031456 | Msa1162350:CDS |
| GCAGGGTATGAATCTATGAA+AGG | 0.606763 | 7_4:+53031273 | Msa1162350:intron |
| AAGGTGTTGAAAACTATGAT+GGG | 0.612325 | 7_4:+53031292 | Msa1162350:CDS |
| TACTACAATACCATTTCCAA+AGG | 0.613692 | 7_4:-53030489 | None:intergenic |
| GTTAACACAGAACTCTAACA+TGG | 0.614753 | 7_4:+53031407 | Msa1162350:CDS |
| CTGTTATACTCAGAATGTAG+GGG | 0.616554 | 7_4:+53031615 | Msa1162350:intron |
| CTACTTGTCTTCGATCATCA+CGG | 0.624034 | 7_4:-53031455 | None:intergenic |
| AACATGGGGAGTGATGGCGT+TGG | 0.638657 | 7_4:+53031423 | Msa1162350:CDS |
| AGCAGTATCAGAGCAAAGAG+AGG | 0.641746 | 7_4:+53031742 | Msa1162350:CDS |
| TGTAGAATGGATCAACACAA+AGG | 0.671539 | 7_4:+53030398 | Msa1162350:CDS |
| GTTGGAGAAATGACCAGCAT+GGG | 0.675608 | 7_4:-53030453 | None:intergenic |
| TGTTGGAGAAATGACCAGCA+TGG | 0.677077 | 7_4:-53030454 | None:intergenic |
| AGACACATGAATTCTCAGCA+GGG | 0.695477 | 7_4:+53030374 | Msa1162350:CDS |
| GATGGGGTGAATGACAGTGA+TGG | 0.701721 | 7_4:+53031309 | Msa1162350:CDS |
| TAACACAGAACTCTAACATG+GGG | 0.708974 | 7_4:+53031409 | Msa1162350:CDS |
| AGGTGTTGAAAACTATGATG+GGG | 0.756832 | 7_4:+53031293 | Msa1162350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAAACATAACTTTTTTT+AGG | + | chr7_4:53030789-53030808 | Msa1162350:intron | 10.0% |
| !!! | TACATAAATAACTTTTTTTT+TGG | - | chr7_4:53031026-53031045 | None:intergenic | 10.0% |
| !!! | ATTAAAACATAACTTTTTTT+AGG | + | chr7_4:53030789-53030808 | Msa1162350:intron | 10.0% |
| !!! | TACATAAATAACTTTTTTTT+TGG | - | chr7_4:53031026-53031045 | None:intergenic | 10.0% |
| !! | TTGCTAAATCTAAAAAAAAA+TGG | + | chr7_4:53030821-53030840 | Msa1162350:intron | 15.0% |
| !! | TGCTAAATCTAAAAAAAAAT+GGG | + | chr7_4:53030822-53030841 | Msa1162350:intron | 15.0% |
| !! | TTATCATTAAGAATAGAATT+CGG | + | chr7_4:53030864-53030883 | Msa1162350:intron | 15.0% |
| !! | AAAAAAGTTATTTATGTACA+AGG | + | chr7_4:53031028-53031047 | Msa1162350:intron | 15.0% |
| !! | AAAAAGTTATTTATGTACAA+GGG | + | chr7_4:53031029-53031048 | Msa1162350:intron | 15.0% |
| !! | GTTAAACATTGTTTAATTAT+TGG | + | chr7_4:53031935-53031954 | Msa1162350:intron | 15.0% |
| !! | ATTAAAATATATATTAGTGC+AGG | - | chr7_4:53032110-53032129 | None:intergenic | 15.0% |
| !! | TTGCTAAATCTAAAAAAAAA+TGG | + | chr7_4:53030821-53030840 | Msa1162350:intron | 15.0% |
| !! | TGCTAAATCTAAAAAAAAAT+GGG | + | chr7_4:53030822-53030841 | Msa1162350:intron | 15.0% |
| !! | TTATCATTAAGAATAGAATT+CGG | + | chr7_4:53030864-53030883 | Msa1162350:intron | 15.0% |
| !! | AAAAAAGTTATTTATGTACA+AGG | + | chr7_4:53031028-53031047 | Msa1162350:intron | 15.0% |
| !! | AAAAAGTTATTTATGTACAA+GGG | + | chr7_4:53031029-53031048 | Msa1162350:intron | 15.0% |
| !! | GTTAAACATTGTTTAATTAT+TGG | + | chr7_4:53031935-53031954 | Msa1162350:intron | 15.0% |
| !! | ATTAAAATATATATTAGTGC+AGG | - | chr7_4:53032110-53032129 | None:intergenic | 15.0% |
| !! | CTTTATGATTAAAAGGATTA+TGG | - | chr7_4:53030316-53030335 | None:intergenic | 20.0% |
| !!! | CATAATCCTTTTAATCATAA+AGG | + | chr7_4:53030314-53030333 | Msa1162350:CDS | 20.0% |
| !!! | TTCTATTTTAAGAAAGTGTA+GGG | - | chr7_4:53030621-53030640 | None:intergenic | 20.0% |
| !!! | ATTCTATTTTAAGAAAGTGT+AGG | - | chr7_4:53030622-53030641 | None:intergenic | 20.0% |
| !!! | ATTTAGTGTTAAATGACTTT+TGG | + | chr7_4:53030764-53030783 | Msa1162350:intron | 20.0% |
| !! | AACAATTTCTGTCTAATTTA+TGG | + | chr7_4:53031084-53031103 | Msa1162350:intron | 20.0% |
| !! | AACATATTGAACAATCAAAT+TGG | + | chr7_4:53031351-53031370 | Msa1162350:CDS | 20.0% |
| !! | CATTTATGATTCTAATGATA+AGG | + | chr7_4:53031515-53031534 | Msa1162350:CDS | 20.0% |
| !!! | TGTTTTCACTTTTTTTTATC+AGG | + | chr7_4:53031547-53031566 | Msa1162350:intron | 20.0% |
| !! | AAAACATAAATGTCTCAAAA+GGG | - | chr7_4:53031903-53031922 | None:intergenic | 20.0% |
| !! | AAAAACATAAATGTCTCAAA+AGG | - | chr7_4:53031904-53031923 | None:intergenic | 20.0% |
| !! | AGATCTTCAAAAACAATTAA+AGG | + | chr7_4:53032008-53032027 | Msa1162350:CDS | 20.0% |
| !! | CTTTATGATTAAAAGGATTA+TGG | - | chr7_4:53030316-53030335 | None:intergenic | 20.0% |
| !!! | CATAATCCTTTTAATCATAA+AGG | + | chr7_4:53030314-53030333 | Msa1162350:CDS | 20.0% |
| !!! | TTCTATTTTAAGAAAGTGTA+GGG | - | chr7_4:53030621-53030640 | None:intergenic | 20.0% |
| !!! | ATTCTATTTTAAGAAAGTGT+AGG | - | chr7_4:53030622-53030641 | None:intergenic | 20.0% |
| !!! | ATTTAGTGTTAAATGACTTT+TGG | + | chr7_4:53030764-53030783 | Msa1162350:intron | 20.0% |
| !! | AACAATTTCTGTCTAATTTA+TGG | + | chr7_4:53031084-53031103 | Msa1162350:intron | 20.0% |
| !! | AACATATTGAACAATCAAAT+TGG | + | chr7_4:53031351-53031370 | Msa1162350:CDS | 20.0% |
| !! | CATTTATGATTCTAATGATA+AGG | + | chr7_4:53031515-53031534 | Msa1162350:CDS | 20.0% |
| !!! | TGTTTTCACTTTTTTTTATC+AGG | + | chr7_4:53031547-53031566 | Msa1162350:intron | 20.0% |
| !! | AAAACATAAATGTCTCAAAA+GGG | - | chr7_4:53031903-53031922 | None:intergenic | 20.0% |
| !! | AAAAACATAAATGTCTCAAA+AGG | - | chr7_4:53031904-53031923 | None:intergenic | 20.0% |
| !! | AGATCTTCAAAAACAATTAA+AGG | + | chr7_4:53032008-53032027 | Msa1162350:CDS | 20.0% |
| ! | TTGTCACCTTTATGATTAAA+AGG | - | chr7_4:53030323-53030342 | None:intergenic | 25.0% |
| !! | TTTCTTCTAGACAACTTTTT+AGG | + | chr7_4:53030567-53030586 | Msa1162350:intron | 25.0% |
| !!! | GCAATTTTTTGTGAATATAG+TGG | + | chr7_4:53030682-53030701 | Msa1162350:intron | 25.0% |
| ! | ACTAAAATTGTATCTTGTGT+TGG | - | chr7_4:53030724-53030743 | None:intergenic | 25.0% |
| ! | TGTATTTCATTGTAGTTACA+TGG | + | chr7_4:53030951-53030970 | Msa1162350:intron | 25.0% |
| ! | TGCATATAAATGTAAATTGC+AGG | + | chr7_4:53031255-53031274 | Msa1162350:intron | 25.0% |
| ! | GCATATAAATGTAAATTGCA+GGG | + | chr7_4:53031256-53031275 | Msa1162350:intron | 25.0% |
| !! | AACATTTCTGATGATTTTCT+TGG | - | chr7_4:53031682-53031701 | None:intergenic | 25.0% |
| ! | AAACATAAATGTCTCAAAAG+GGG | - | chr7_4:53031902-53031921 | None:intergenic | 25.0% |
| ! | TTGTCACCTTTATGATTAAA+AGG | - | chr7_4:53030323-53030342 | None:intergenic | 25.0% |
| !! | TTTCTTCTAGACAACTTTTT+AGG | + | chr7_4:53030567-53030586 | Msa1162350:intron | 25.0% |
| !!! | GCAATTTTTTGTGAATATAG+TGG | + | chr7_4:53030682-53030701 | Msa1162350:intron | 25.0% |
| ! | ACTAAAATTGTATCTTGTGT+TGG | - | chr7_4:53030724-53030743 | None:intergenic | 25.0% |
| ! | TGTATTTCATTGTAGTTACA+TGG | + | chr7_4:53030951-53030970 | Msa1162350:intron | 25.0% |
| ! | TGCATATAAATGTAAATTGC+AGG | + | chr7_4:53031255-53031274 | Msa1162350:intron | 25.0% |
| ! | GCATATAAATGTAAATTGCA+GGG | + | chr7_4:53031256-53031275 | Msa1162350:intron | 25.0% |
| !! | AACATTTCTGATGATTTTCT+TGG | - | chr7_4:53031682-53031701 | None:intergenic | 25.0% |
| ! | AAACATAAATGTCTCAAAAG+GGG | - | chr7_4:53031902-53031921 | None:intergenic | 25.0% |
| !!! | TTGAATTTGGTTGGTTTTGT+TGG | - | chr7_4:53030199-53030218 | None:intergenic | 30.0% |
| AACAAAACCAACCAAATTCA+AGG | + | chr7_4:53030198-53030217 | Msa1162350:CDS | 30.0% | |
| ! | ATCTACCTTTAGAGAATTCA+TGG | + | chr7_4:53030289-53030308 | Msa1162350:CDS | 30.0% |
| TACTACAATACCATTTCCAA+AGG | - | chr7_4:53030492-53030511 | None:intergenic | 30.0% | |
| ! | GCTAGTTCAATGTTTCTTTT+GGG | + | chr7_4:53030589-53030608 | Msa1162350:intron | 30.0% |
| ! | CTAGTTCAATGTTTCTTTTG+GGG | + | chr7_4:53030590-53030609 | Msa1162350:intron | 30.0% |
| ! | TAGTTCAATGTTTCTTTTGG+GGG | + | chr7_4:53030591-53030610 | Msa1162350:intron | 30.0% |
| AAGTTATTTATGTACAAGGG+AGG | + | chr7_4:53031032-53031051 | Msa1162350:intron | 30.0% | |
| AGTTATTTATGTACAAGGGA+GGG | + | chr7_4:53031033-53031052 | Msa1162350:intron | 30.0% | |
| CTAATGTGATTCATATTGCT+AGG | - | chr7_4:53031209-53031228 | None:intergenic | 30.0% | |
| !! | AAAGGTGTTGAAAACTATGA+TGG | + | chr7_4:53031291-53031310 | Msa1162350:CDS | 30.0% |
| !! | AAGGTGTTGAAAACTATGAT+GGG | + | chr7_4:53031292-53031311 | Msa1162350:CDS | 30.0% |
| TTAACACAGAACTCTAACAT+GGG | + | chr7_4:53031408-53031427 | Msa1162350:CDS | 30.0% | |
| ! | AATTTTGCCTCCTAATTTTG+CGG | + | chr7_4:53031579-53031598 | Msa1162350:intron | 30.0% |
| TTCTGTTATACTCAGAATGT+AGG | + | chr7_4:53031613-53031632 | Msa1162350:intron | 30.0% | |
| TCTGTTATACTCAGAATGTA+GGG | + | chr7_4:53031614-53031633 | Msa1162350:intron | 30.0% | |
| ! | ATCATCAGAAATGTTTGTTG+TGG | + | chr7_4:53031687-53031706 | Msa1162350:CDS | 30.0% |
| GATTGTTCCAAACATTGATA+AGG | + | chr7_4:53031843-53031862 | Msa1162350:CDS | 30.0% | |
| ATTCTGACCTTATCAATGTT+TGG | - | chr7_4:53031853-53031872 | None:intergenic | 30.0% | |
| TAACTGCATGGAAATGAATA+GGG | - | chr7_4:53032070-53032089 | None:intergenic | 30.0% | |
| TTAACTGCATGGAAATGAAT+AGG | - | chr7_4:53032071-53032090 | None:intergenic | 30.0% | |
| ACTAATCATGATTAACTGCA+TGG | - | chr7_4:53032082-53032101 | None:intergenic | 30.0% | |
| !!! | TTGAATTTGGTTGGTTTTGT+TGG | - | chr7_4:53030199-53030218 | None:intergenic | 30.0% |
| AACAAAACCAACCAAATTCA+AGG | + | chr7_4:53030198-53030217 | Msa1162350:CDS | 30.0% | |
| ! | ATCTACCTTTAGAGAATTCA+TGG | + | chr7_4:53030289-53030308 | Msa1162350:CDS | 30.0% |
| TACTACAATACCATTTCCAA+AGG | - | chr7_4:53030492-53030511 | None:intergenic | 30.0% | |
| ! | GCTAGTTCAATGTTTCTTTT+GGG | + | chr7_4:53030589-53030608 | Msa1162350:intron | 30.0% |
| ! | CTAGTTCAATGTTTCTTTTG+GGG | + | chr7_4:53030590-53030609 | Msa1162350:intron | 30.0% |
| ! | TAGTTCAATGTTTCTTTTGG+GGG | + | chr7_4:53030591-53030610 | Msa1162350:intron | 30.0% |
| AAGTTATTTATGTACAAGGG+AGG | + | chr7_4:53031032-53031051 | Msa1162350:intron | 30.0% | |
| AGTTATTTATGTACAAGGGA+GGG | + | chr7_4:53031033-53031052 | Msa1162350:intron | 30.0% | |
| CTAATGTGATTCATATTGCT+AGG | - | chr7_4:53031209-53031228 | None:intergenic | 30.0% | |
| !! | AAAGGTGTTGAAAACTATGA+TGG | + | chr7_4:53031291-53031310 | Msa1162350:CDS | 30.0% |
| !! | AAGGTGTTGAAAACTATGAT+GGG | + | chr7_4:53031292-53031311 | Msa1162350:CDS | 30.0% |
| TTAACACAGAACTCTAACAT+GGG | + | chr7_4:53031408-53031427 | Msa1162350:CDS | 30.0% | |
| ! | AATTTTGCCTCCTAATTTTG+CGG | + | chr7_4:53031579-53031598 | Msa1162350:intron | 30.0% |
| TTCTGTTATACTCAGAATGT+AGG | + | chr7_4:53031613-53031632 | Msa1162350:intron | 30.0% | |
| TCTGTTATACTCAGAATGTA+GGG | + | chr7_4:53031614-53031633 | Msa1162350:intron | 30.0% | |
| ! | ATCATCAGAAATGTTTGTTG+TGG | + | chr7_4:53031687-53031706 | Msa1162350:CDS | 30.0% |
| GATTGTTCCAAACATTGATA+AGG | + | chr7_4:53031843-53031862 | Msa1162350:CDS | 30.0% | |
| ATTCTGACCTTATCAATGTT+TGG | - | chr7_4:53031853-53031872 | None:intergenic | 30.0% | |
| TAACTGCATGGAAATGAATA+GGG | - | chr7_4:53032070-53032089 | None:intergenic | 30.0% | |
| TTAACTGCATGGAAATGAAT+AGG | - | chr7_4:53032071-53032090 | None:intergenic | 30.0% | |
| ACTAATCATGATTAACTGCA+TGG | - | chr7_4:53032082-53032101 | None:intergenic | 30.0% | |
| AAACGAAGCAACCTTGAATT+TGG | - | chr7_4:53030212-53030231 | None:intergenic | 35.0% | |
| TCAAGTTTCAAACAAGCTGA+AGG | + | chr7_4:53030236-53030255 | Msa1162350:CDS | 35.0% | |
| ATGGTCCATGAATTCTCTAA+AGG | - | chr7_4:53030297-53030316 | None:intergenic | 35.0% | |
| TGTAGAATGGATCAACACAA+AGG | + | chr7_4:53030398-53030417 | Msa1162350:CDS | 35.0% | |
| !!! | ACCAATCTTTTAAGACAGAG+TGG | + | chr7_4:53030428-53030447 | Msa1162350:CDS | 35.0% |
| ACCACTCTGTCTTAAAAGAT+TGG | - | chr7_4:53030432-53030451 | None:intergenic | 35.0% | |
| AAAGGAGATGATGTTGTTGT+TGG | - | chr7_4:53030474-53030493 | None:intergenic | 35.0% | |
| AACAACAACATCATCTCCTT+TGG | + | chr7_4:53030473-53030492 | Msa1162350:CDS | 35.0% | |
| ! | AACATCATCTCCTTTGGAAA+TGG | + | chr7_4:53030479-53030498 | Msa1162350:CDS | 35.0% |
| !! | GGCTAGTTCAATGTTTCTTT+TGG | + | chr7_4:53030588-53030607 | Msa1162350:intron | 35.0% |
| GTTATTTATGTACAAGGGAG+GGG | + | chr7_4:53031034-53031053 | Msa1162350:intron | 35.0% | |
| !! | TGCTGATTCAAATCATGAGA+TGG | + | chr7_4:53031119-53031138 | Msa1162350:intron | 35.0% |
| GATTCAAATCATGAGATGGT+AGG | + | chr7_4:53031123-53031142 | Msa1162350:intron | 35.0% | |
| CTATGCTTGTTTAGCATTTG+TGG | - | chr7_4:53031157-53031176 | None:intergenic | 35.0% | |
| CACAAATGCTAAACAAGCAT+AGG | + | chr7_4:53031155-53031174 | Msa1162350:intron | 35.0% | |
| AAATGCTAAACAAGCATAGG+TGG | + | chr7_4:53031158-53031177 | Msa1162350:intron | 35.0% | |
| !! | AGGTGTTGAAAACTATGATG+GGG | + | chr7_4:53031293-53031312 | Msa1162350:CDS | 35.0% |
| GTTAACATTCTCAAGGAAGA+AGG | - | chr7_4:53031393-53031412 | None:intergenic | 35.0% | |
| GTTCTGTGTTAACATTCTCA+AGG | - | chr7_4:53031400-53031419 | None:intergenic | 35.0% | |
| GTTAACACAGAACTCTAACA+TGG | + | chr7_4:53031407-53031426 | Msa1162350:CDS | 35.0% | |
| TAACACAGAACTCTAACATG+GGG | + | chr7_4:53031409-53031428 | Msa1162350:CDS | 35.0% | |
| AATGACGATGCTCAACATTA+TGG | + | chr7_4:53031483-53031502 | Msa1162350:CDS | 35.0% | |
| TAGGAGGCAAAATTGCATTT+AGG | - | chr7_4:53031573-53031592 | None:intergenic | 35.0% | |
| AATCGTGAATCCGCAAAATT+AGG | - | chr7_4:53031592-53031611 | None:intergenic | 35.0% | |
| CTGTTATACTCAGAATGTAG+GGG | + | chr7_4:53031615-53031634 | Msa1162350:intron | 35.0% | |
| CACATCAGAAATGTTAGACT+TGG | + | chr7_4:53031969-53031988 | Msa1162350:CDS | 35.0% | |
| AACTGCATGGAAATGAATAG+GGG | - | chr7_4:53032069-53032088 | None:intergenic | 35.0% | |
| AAACGAAGCAACCTTGAATT+TGG | - | chr7_4:53030212-53030231 | None:intergenic | 35.0% | |
| TCAAGTTTCAAACAAGCTGA+AGG | + | chr7_4:53030236-53030255 | Msa1162350:CDS | 35.0% | |
| ATGGTCCATGAATTCTCTAA+AGG | - | chr7_4:53030297-53030316 | None:intergenic | 35.0% | |
| TGTAGAATGGATCAACACAA+AGG | + | chr7_4:53030398-53030417 | Msa1162350:CDS | 35.0% | |
| !!! | ACCAATCTTTTAAGACAGAG+TGG | + | chr7_4:53030428-53030447 | Msa1162350:CDS | 35.0% |
| ACCACTCTGTCTTAAAAGAT+TGG | - | chr7_4:53030432-53030451 | None:intergenic | 35.0% | |
| AAAGGAGATGATGTTGTTGT+TGG | - | chr7_4:53030474-53030493 | None:intergenic | 35.0% | |
| AACAACAACATCATCTCCTT+TGG | + | chr7_4:53030473-53030492 | Msa1162350:CDS | 35.0% | |
| ! | AACATCATCTCCTTTGGAAA+TGG | + | chr7_4:53030479-53030498 | Msa1162350:CDS | 35.0% |
| !! | GGCTAGTTCAATGTTTCTTT+TGG | + | chr7_4:53030588-53030607 | Msa1162350:intron | 35.0% |
| GTTATTTATGTACAAGGGAG+GGG | + | chr7_4:53031034-53031053 | Msa1162350:intron | 35.0% | |
| !! | TGCTGATTCAAATCATGAGA+TGG | + | chr7_4:53031119-53031138 | Msa1162350:intron | 35.0% |
| GATTCAAATCATGAGATGGT+AGG | + | chr7_4:53031123-53031142 | Msa1162350:intron | 35.0% | |
| CTATGCTTGTTTAGCATTTG+TGG | - | chr7_4:53031157-53031176 | None:intergenic | 35.0% | |
| CACAAATGCTAAACAAGCAT+AGG | + | chr7_4:53031155-53031174 | Msa1162350:intron | 35.0% | |
| AAATGCTAAACAAGCATAGG+TGG | + | chr7_4:53031158-53031177 | Msa1162350:intron | 35.0% | |
| !! | AGGTGTTGAAAACTATGATG+GGG | + | chr7_4:53031293-53031312 | Msa1162350:CDS | 35.0% |
| GTTAACATTCTCAAGGAAGA+AGG | - | chr7_4:53031393-53031412 | None:intergenic | 35.0% | |
| GTTCTGTGTTAACATTCTCA+AGG | - | chr7_4:53031400-53031419 | None:intergenic | 35.0% | |
| GTTAACACAGAACTCTAACA+TGG | + | chr7_4:53031407-53031426 | Msa1162350:CDS | 35.0% | |
| TAACACAGAACTCTAACATG+GGG | + | chr7_4:53031409-53031428 | Msa1162350:CDS | 35.0% | |
| AATGACGATGCTCAACATTA+TGG | + | chr7_4:53031483-53031502 | Msa1162350:CDS | 35.0% | |
| TAGGAGGCAAAATTGCATTT+AGG | - | chr7_4:53031573-53031592 | None:intergenic | 35.0% | |
| AATCGTGAATCCGCAAAATT+AGG | - | chr7_4:53031592-53031611 | None:intergenic | 35.0% | |
| CTGTTATACTCAGAATGTAG+GGG | + | chr7_4:53031615-53031634 | Msa1162350:intron | 35.0% | |
| CACATCAGAAATGTTAGACT+TGG | + | chr7_4:53031969-53031988 | Msa1162350:CDS | 35.0% | |
| AACTGCATGGAAATGAATAG+GGG | - | chr7_4:53032069-53032088 | None:intergenic | 35.0% | |
| GAAGCAACCTTGAATTTGGT+TGG | - | chr7_4:53030208-53030227 | None:intergenic | 40.0% | |
| GAAGGTTGTGCTACAAATTC+TGG | + | chr7_4:53030254-53030273 | Msa1162350:CDS | 40.0% | |
| AAGACACATGAATTCTCAGC+AGG | + | chr7_4:53030373-53030392 | Msa1162350:CDS | 40.0% | |
| AGACACATGAATTCTCAGCA+GGG | + | chr7_4:53030374-53030393 | Msa1162350:CDS | 40.0% | |
| GTGAATATAGTGGTCAGCTA+AGG | + | chr7_4:53030692-53030711 | Msa1162350:intron | 40.0% | |
| TATAGTGGTCAGCTAAGGTT+TGG | + | chr7_4:53030697-53030716 | Msa1162350:intron | 40.0% | |
| CTAAGTCTAACGCTATTCGT+TGG | - | chr7_4:53030925-53030944 | None:intergenic | 40.0% | |
| GCAGGGTATGAATCTATGAA+AGG | + | chr7_4:53031273-53031292 | Msa1162350:intron | 40.0% | |
| CTACTTGTCTTCGATCATCA+CGG | - | chr7_4:53031458-53031477 | None:intergenic | 40.0% | |
| ATACTGCTTGGAACAGAATC+TGG | - | chr7_4:53031730-53031749 | None:intergenic | 40.0% | |
| GAAGCAACCTTGAATTTGGT+TGG | - | chr7_4:53030208-53030227 | None:intergenic | 40.0% | |
| GAAGGTTGTGCTACAAATTC+TGG | + | chr7_4:53030254-53030273 | Msa1162350:CDS | 40.0% | |
| AAGACACATGAATTCTCAGC+AGG | + | chr7_4:53030373-53030392 | Msa1162350:CDS | 40.0% | |
| AGACACATGAATTCTCAGCA+GGG | + | chr7_4:53030374-53030393 | Msa1162350:CDS | 40.0% | |
| GTGAATATAGTGGTCAGCTA+AGG | + | chr7_4:53030692-53030711 | Msa1162350:intron | 40.0% | |
| TATAGTGGTCAGCTAAGGTT+TGG | + | chr7_4:53030697-53030716 | Msa1162350:intron | 40.0% | |
| CTAAGTCTAACGCTATTCGT+TGG | - | chr7_4:53030925-53030944 | None:intergenic | 40.0% | |
| GCAGGGTATGAATCTATGAA+AGG | + | chr7_4:53031273-53031292 | Msa1162350:intron | 40.0% | |
| CTACTTGTCTTCGATCATCA+CGG | - | chr7_4:53031458-53031477 | None:intergenic | 40.0% | |
| ATACTGCTTGGAACAGAATC+TGG | - | chr7_4:53031730-53031749 | None:intergenic | 40.0% | |
| TTCTCAGCAGGGTTGTAGAA+TGG | + | chr7_4:53030385-53030404 | Msa1162350:CDS | 45.0% | |
| GTTGGAGAAATGACCAGCAT+GGG | - | chr7_4:53030456-53030475 | None:intergenic | 45.0% | |
| TGTTGGAGAAATGACCAGCA+TGG | - | chr7_4:53030457-53030476 | None:intergenic | 45.0% | |
| CTCAAGGAAGAAGGACTTCT+TGG | - | chr7_4:53031384-53031403 | None:intergenic | 45.0% | |
| AACTCTAACATGGGGAGTGA+TGG | + | chr7_4:53031417-53031436 | Msa1162350:CDS | 45.0% | |
| CGTGATGATCGAAGACAAGT+AGG | + | chr7_4:53031456-53031475 | Msa1162350:CDS | 45.0% | |
| CGTGAATCCGCAAAATTAGG+AGG | - | chr7_4:53031589-53031608 | None:intergenic | 45.0% | |
| ! | GAATGTAGGGGTACGAAATC+AGG | + | chr7_4:53031627-53031646 | Msa1162350:intron | 45.0% |
| CTCTTTGCTCTGATACTGCT+TGG | - | chr7_4:53031742-53031761 | None:intergenic | 45.0% | |
| AGCAGTATCAGAGCAAAGAG+AGG | + | chr7_4:53031742-53031761 | Msa1162350:CDS | 45.0% | |
| TTCTTCTTACCCTTTCGGCA+AGG | - | chr7_4:53031789-53031808 | None:intergenic | 45.0% | |
| CCGAGTTCTTCTTACCCTTT+CGG | - | chr7_4:53031794-53031813 | None:intergenic | 45.0% | |
| CCGAAAGGGTAAGAAGAACT+CGG | + | chr7_4:53031791-53031810 | Msa1162350:CDS | 45.0% | |
| TTCTCAGCAGGGTTGTAGAA+TGG | + | chr7_4:53030385-53030404 | Msa1162350:CDS | 45.0% | |
| GTTGGAGAAATGACCAGCAT+GGG | - | chr7_4:53030456-53030475 | None:intergenic | 45.0% | |
| TGTTGGAGAAATGACCAGCA+TGG | - | chr7_4:53030457-53030476 | None:intergenic | 45.0% | |
| CTCAAGGAAGAAGGACTTCT+TGG | - | chr7_4:53031384-53031403 | None:intergenic | 45.0% | |
| AACTCTAACATGGGGAGTGA+TGG | + | chr7_4:53031417-53031436 | Msa1162350:CDS | 45.0% | |
| CGTGATGATCGAAGACAAGT+AGG | + | chr7_4:53031456-53031475 | Msa1162350:CDS | 45.0% | |
| CGTGAATCCGCAAAATTAGG+AGG | - | chr7_4:53031589-53031608 | None:intergenic | 45.0% | |
| ! | GAATGTAGGGGTACGAAATC+AGG | + | chr7_4:53031627-53031646 | Msa1162350:intron | 45.0% |
| CTCTTTGCTCTGATACTGCT+TGG | - | chr7_4:53031742-53031761 | None:intergenic | 45.0% | |
| AGCAGTATCAGAGCAAAGAG+AGG | + | chr7_4:53031742-53031761 | Msa1162350:CDS | 45.0% | |
| TTCTTCTTACCCTTTCGGCA+AGG | - | chr7_4:53031789-53031808 | None:intergenic | 45.0% | |
| CCGAGTTCTTCTTACCCTTT+CGG | - | chr7_4:53031794-53031813 | None:intergenic | 45.0% | |
| CCGAAAGGGTAAGAAGAACT+CGG | + | chr7_4:53031791-53031810 | Msa1162350:CDS | 45.0% | |
| GATGGGGTGAATGACAGTGA+TGG | + | chr7_4:53031309-53031328 | Msa1162350:CDS | 50.0% | |
| ATCCTAGAAGCCTTGCCGAA+AGG | + | chr7_4:53031776-53031795 | Msa1162350:CDS | 50.0% | |
| TCCTAGAAGCCTTGCCGAAA+GGG | + | chr7_4:53031777-53031796 | Msa1162350:CDS | 50.0% | |
| GATGGGGTGAATGACAGTGA+TGG | + | chr7_4:53031309-53031328 | Msa1162350:CDS | 50.0% | |
| ATCCTAGAAGCCTTGCCGAA+AGG | + | chr7_4:53031776-53031795 | Msa1162350:CDS | 50.0% | |
| TCCTAGAAGCCTTGCCGAAA+GGG | + | chr7_4:53031777-53031796 | Msa1162350:CDS | 50.0% | |
| AGACAGAGTGGTTCCCATGC+TGG | + | chr7_4:53030440-53030459 | Msa1162350:CDS | 55.0% | |
| ! | AACATGGGGAGTGATGGCGT+TGG | + | chr7_4:53031423-53031442 | Msa1162350:CDS | 55.0% |
| ACCCTTTCGGCAAGGCTTCT+AGG | - | chr7_4:53031781-53031800 | None:intergenic | 55.0% | |
| AGACAGAGTGGTTCCCATGC+TGG | + | chr7_4:53030440-53030459 | Msa1162350:CDS | 55.0% | |
| ! | AACATGGGGAGTGATGGCGT+TGG | + | chr7_4:53031423-53031442 | Msa1162350:CDS | 55.0% |
| ACCCTTTCGGCAAGGCTTCT+AGG | - | chr7_4:53031781-53031800 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 53030167 | 53032189 | 53030167 | ID=Msa1162350;Name=Msa1162350 |
| chr7_4 | mRNA | 53030167 | 53032189 | 53030167 | ID=Msa1162350-mRNA-1;Parent=Msa1162350;Name=Msa1162350-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|5|0|315 |
| chr7_4 | exon | 53030167 | 53030500 | 53030167 | ID=Msa1162350-mRNA-1:exon:15275;Parent=Msa1162350-mRNA-1 |
| chr7_4 | exon | 53031277 | 53031536 | 53031277 | ID=Msa1162350-mRNA-1:exon:15276;Parent=Msa1162350-mRNA-1 |
| chr7_4 | exon | 53031628 | 53031864 | 53031628 | ID=Msa1162350-mRNA-1:exon:15277;Parent=Msa1162350-mRNA-1 |
| chr7_4 | exon | 53031961 | 53032029 | 53031961 | ID=Msa1162350-mRNA-1:exon:15278;Parent=Msa1162350-mRNA-1 |
| chr7_4 | exon | 53032142 | 53032189 | 53032142 | ID=Msa1162350-mRNA-1:exon:15279;Parent=Msa1162350-mRNA-1 |
| chr7_4 | CDS | 53030167 | 53030500 | 53030167 | ID=Msa1162350-mRNA-1:cds;Parent=Msa1162350-mRNA-1 |
| chr7_4 | CDS | 53031277 | 53031536 | 53031277 | ID=Msa1162350-mRNA-1:cds;Parent=Msa1162350-mRNA-1 |
| chr7_4 | CDS | 53031628 | 53031864 | 53031628 | ID=Msa1162350-mRNA-1:cds;Parent=Msa1162350-mRNA-1 |
| chr7_4 | CDS | 53031961 | 53032029 | 53031961 | ID=Msa1162350-mRNA-1:cds;Parent=Msa1162350-mRNA-1 |
| chr7_4 | CDS | 53032142 | 53032189 | 53032142 | ID=Msa1162350-mRNA-1:cds;Parent=Msa1162350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
