Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163250 | KEH23781.1 | 78.320 | 369 | 62 | 4 | 1 | 354 | 1 | 366 | 0.0 | 595 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163250 | sp|F4IXE7|IDM1_ARATH | 36.570 | 309 | 172 | 5 | 11 | 297 | 723 | 1029 | 3.43e-56 | 201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163250 | A0A072U345 | 78.320 | 369 | 62 | 4 | 1 | 354 | 1 | 366 | 0.0 | 595 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1163250 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163250 | MtrunA17_Chr7g0259981 | 81.494 | 308 | 52 | 2 | 1 | 305 | 1 | 306 | 0.0 | 532 |
| Msa1163250 | MtrunA17_Chr1g0185491 | 47.024 | 336 | 148 | 7 | 10 | 317 | 913 | 1246 | 1.69e-95 | 311 |
| Msa1163250 | MtrunA17_Chr1g0205451 | 38.762 | 307 | 158 | 5 | 11 | 289 | 706 | 1010 | 5.48e-69 | 234 |
| Msa1163250 | MtrunA17_Chr2g0316251 | 36.039 | 308 | 171 | 5 | 8 | 291 | 861 | 1166 | 1.61e-59 | 207 |
| Msa1163250 | MtrunA17_Chr5g0430361 | 34.062 | 320 | 183 | 8 | 8 | 302 | 752 | 1068 | 9.62e-56 | 196 |
| Msa1163250 | MtrunA17_Chr3g0105291 | 32.219 | 329 | 192 | 9 | 13 | 316 | 707 | 1029 | 7.23e-53 | 188 |
| Msa1163250 | MtrunA17_Chr5g0407211 | 33.333 | 294 | 168 | 6 | 13 | 288 | 125 | 408 | 7.78e-49 | 169 |
| Msa1163250 | MtrunA17_Chr5g0407251 | 32.653 | 294 | 170 | 6 | 13 | 288 | 125 | 408 | 1.46e-47 | 166 |
| Msa1163250 | MtrunA17_Chr3g0134811 | 31.190 | 311 | 190 | 6 | 9 | 297 | 489 | 797 | 4.23e-43 | 159 |
| Msa1163250 | MtrunA17_Chr7g0270101 | 33.218 | 289 | 159 | 7 | 13 | 271 | 481 | 765 | 1.79e-42 | 157 |
| Msa1163250 | MtrunA17_Chr3g0134821 | 31.731 | 312 | 169 | 8 | 9 | 288 | 522 | 821 | 6.83e-41 | 153 |
| Msa1163250 | MtrunA17_Chr1g0182481 | 26.479 | 355 | 173 | 13 | 13 | 292 | 553 | 894 | 5.11e-26 | 109 |
| Msa1163250 | MtrunA17_Chr3g0134851 | 28.938 | 273 | 145 | 9 | 13 | 271 | 205 | 442 | 1.95e-23 | 100 |
| Msa1163250 | MtrunA17_Chr1g0179841 | 27.036 | 307 | 179 | 12 | 7 | 293 | 523 | 804 | 3.89e-21 | 95.1 |
| Msa1163250 | MtrunA17_Chr7g0265211 | 25.890 | 309 | 176 | 13 | 7 | 291 | 668 | 947 | 1.50e-19 | 90.1 |
| Msa1163250 | MtrunA17_Chr7g0265211 | 50.000 | 48 | 24 | 0 | 13 | 60 | 588 | 635 | 6.66e-11 | 63.9 |
| Msa1163250 | MtrunA17_Chr4g0028111 | 21.614 | 347 | 182 | 11 | 6 | 266 | 220 | 562 | 8.71e-18 | 84.7 |
| Msa1163250 | MtrunA17_Chr2g0320451 | 29.221 | 154 | 100 | 4 | 141 | 291 | 876 | 1023 | 5.93e-14 | 73.2 |
| Msa1163250 | MtrunA17_Chr2g0320451 | 50.000 | 48 | 24 | 0 | 13 | 60 | 557 | 604 | 4.33e-12 | 67.4 |
| Msa1163250 | MtrunA17_Chr4g0025251 | 23.715 | 253 | 144 | 9 | 79 | 291 | 458 | 701 | 3.62e-13 | 70.9 |
| Msa1163250 | MtrunA17_Chr4g0038871 | 55.102 | 49 | 20 | 1 | 11 | 57 | 696 | 744 | 8.04e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1163250 | AT5G36740.5 | 41.935 | 310 | 154 | 7 | 11 | 296 | 647 | 954 | 1.59e-76 | 256 |
| Msa1163250 | AT5G36740.1 | 41.935 | 310 | 154 | 7 | 11 | 296 | 647 | 954 | 1.59e-76 | 256 |
| Msa1163250 | AT5G36740.4 | 40.312 | 320 | 155 | 6 | 11 | 296 | 494 | 811 | 1.61e-74 | 249 |
| Msa1163250 | AT1G05380.3 | 38.907 | 311 | 159 | 7 | 16 | 301 | 627 | 931 | 5.87e-69 | 234 |
| Msa1163250 | AT1G05380.1 | 38.907 | 311 | 159 | 7 | 16 | 301 | 627 | 931 | 5.87e-69 | 234 |
| Msa1163250 | AT1G05380.2 | 38.907 | 311 | 159 | 7 | 16 | 301 | 627 | 931 | 5.87e-69 | 234 |
| Msa1163250 | AT4G14920.3 | 38.762 | 307 | 163 | 7 | 8 | 291 | 679 | 983 | 7.13e-68 | 231 |
| Msa1163250 | AT4G14920.2 | 38.762 | 307 | 163 | 7 | 8 | 291 | 679 | 983 | 7.39e-68 | 231 |
| Msa1163250 | AT4G14920.1 | 38.762 | 307 | 163 | 7 | 8 | 291 | 679 | 983 | 7.39e-68 | 231 |
| Msa1163250 | AT5G36670.4 | 38.650 | 326 | 156 | 9 | 11 | 296 | 647 | 968 | 1.28e-66 | 228 |
| Msa1163250 | AT5G36670.5 | 38.650 | 326 | 156 | 9 | 11 | 296 | 647 | 968 | 1.28e-66 | 228 |
| Msa1163250 | AT5G36670.3 | 37.202 | 336 | 157 | 8 | 11 | 296 | 494 | 825 | 1.96e-64 | 221 |
| Msa1163250 | AT5G36670.1 | 37.202 | 336 | 157 | 8 | 11 | 296 | 647 | 978 | 2.47e-64 | 221 |
| Msa1163250 | AT5G36670.2 | 43.373 | 249 | 115 | 7 | 11 | 235 | 647 | 893 | 3.09e-61 | 211 |
| Msa1163250 | AT5G36740.2 | 43.373 | 249 | 115 | 7 | 11 | 235 | 647 | 893 | 3.09e-61 | 211 |
| Msa1163250 | AT5G36740.3 | 43.373 | 249 | 115 | 7 | 11 | 235 | 647 | 893 | 3.09e-61 | 211 |
| Msa1163250 | AT3G14980.5 | 36.570 | 309 | 172 | 5 | 11 | 297 | 678 | 984 | 3.28e-57 | 201 |
| Msa1163250 | AT3G14980.6 | 36.570 | 309 | 172 | 5 | 11 | 297 | 723 | 1029 | 3.49e-57 | 201 |
| Msa1163250 | AT3G14980.1 | 36.570 | 309 | 172 | 5 | 11 | 297 | 723 | 1029 | 3.49e-57 | 201 |
| Msa1163250 | AT3G14980.2 | 36.570 | 309 | 172 | 5 | 11 | 297 | 723 | 1029 | 3.49e-57 | 201 |
| Msa1163250 | AT3G14980.3 | 36.570 | 309 | 172 | 5 | 11 | 297 | 723 | 1029 | 4.11e-57 | 200 |
| Msa1163250 | AT5G58610.4 | 35.873 | 315 | 165 | 10 | 2 | 286 | 460 | 767 | 5.12e-52 | 185 |
| Msa1163250 | AT5G58610.6 | 38.127 | 299 | 154 | 9 | 2 | 286 | 682 | 963 | 5.35e-52 | 186 |
| Msa1163250 | AT5G58610.1 | 38.127 | 299 | 154 | 9 | 2 | 286 | 682 | 963 | 6.53e-52 | 185 |
| Msa1163250 | AT5G58610.5 | 35.873 | 315 | 165 | 10 | 2 | 286 | 682 | 989 | 1.44e-51 | 184 |
| Msa1163250 | AT5G58610.8 | 35.873 | 315 | 165 | 10 | 2 | 286 | 691 | 998 | 1.60e-51 | 184 |
| Msa1163250 | AT5G58610.2 | 35.873 | 315 | 165 | 10 | 2 | 286 | 691 | 998 | 1.60e-51 | 184 |
| Msa1163250 | AT5G58610.3 | 35.873 | 315 | 165 | 10 | 2 | 286 | 691 | 998 | 1.66e-51 | 184 |
| Msa1163250 | AT5G58610.7 | 35.873 | 315 | 165 | 10 | 2 | 286 | 682 | 989 | 1.76e-51 | 184 |
| Msa1163250 | AT5G58610.10 | 33.955 | 268 | 145 | 8 | 2 | 239 | 691 | 956 | 1.33e-40 | 152 |
| Msa1163250 | AT5G58610.9 | 33.955 | 268 | 145 | 8 | 2 | 239 | 682 | 947 | 1.42e-40 | 152 |
| Msa1163250 | AT5G63900.1 | 31.613 | 310 | 188 | 11 | 11 | 302 | 253 | 556 | 1.34e-35 | 136 |
| Msa1163250 | AT2G36720.1 | 25.401 | 374 | 190 | 10 | 13 | 301 | 614 | 983 | 1.46e-32 | 129 |
| Msa1163250 | AT2G36720.2 | 25.401 | 374 | 190 | 10 | 13 | 301 | 614 | 983 | 1.46e-32 | 129 |
| Msa1163250 | AT2G37520.1 | 27.933 | 358 | 174 | 12 | 13 | 293 | 467 | 817 | 1.82e-32 | 129 |
| Msa1163250 | AT3G14980.4 | 35.981 | 214 | 113 | 5 | 11 | 202 | 723 | 934 | 6.24e-32 | 127 |
| Msa1163250 | AT3G53680.1 | 26.243 | 362 | 177 | 13 | 13 | 295 | 485 | 835 | 2.87e-28 | 116 |
| Msa1163250 | AT3G53680.2 | 26.243 | 362 | 177 | 13 | 13 | 295 | 487 | 837 | 3.07e-28 | 116 |
| Msa1163250 | AT5G58610.11 | 30.870 | 230 | 127 | 8 | 2 | 201 | 682 | 909 | 6.00e-26 | 109 |
| Msa1163250 | AT2G27980.1 | 26.241 | 282 | 163 | 9 | 26 | 291 | 805 | 1057 | 8.67e-20 | 91.7 |
| Msa1163250 | AT2G27980.1 | 45.098 | 51 | 28 | 0 | 6 | 56 | 687 | 737 | 7.51e-11 | 64.3 |
Find 70 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACACTTGGACTTCCTCTTT+TGG | 0.216281 | 7_4:+54354533 | Msa1163250:CDS |
| CCAATGGCTACTTAGAATTC+TGG | 0.217920 | 7_4:-54352641 | None:intergenic |
| ATGGCAGAGATGCCATTTAT+TGG | 0.258182 | 7_4:+54354205 | Msa1163250:CDS |
| CTAACTCGTGTTCCAATAAA+TGG | 0.259990 | 7_4:-54354217 | None:intergenic |
| ACAAGACTCAGAAAGCTATC+AGG | 0.305131 | 7_4:+54354961 | Msa1163250:CDS |
| TTGGAACACGAGTTAGGTTT+AGG | 0.320138 | 7_4:+54354224 | Msa1163250:CDS |
| AAACCCATTACTTTGGATCT+TGG | 0.343252 | 7_4:+54352595 | Msa1163250:CDS |
| AATTGGTGAAATAGGATTCA+TGG | 0.360966 | 7_4:+54354175 | Msa1163250:intron |
| CGAGCTCCTCGTAATTCATA+TGG | 0.368404 | 7_4:-54355038 | None:intergenic |
| TTTACTGTATTTCTAGAGAA+AGG | 0.371214 | 7_4:+54354038 | Msa1163250:CDS |
| GGAAGTGAAAATCCCGCTAT+TGG | 0.378386 | 7_4:+54351765 | Msa1163250:CDS |
| CATTTATTGGAACACGAGTT+AGG | 0.385764 | 7_4:+54354218 | Msa1163250:CDS |
| ATTGTCAGTGGAAGAACTTC+AGG | 0.387079 | 7_4:+54355011 | Msa1163250:CDS |
| CAATGGCTACTTAGAATTCT+GGG | 0.405998 | 7_4:-54352640 | None:intergenic |
| CGCTACAAGTGTTACACACT+TGG | 0.417196 | 7_4:+54354519 | Msa1163250:CDS |
| TTACTGTATTTCTAGAGAAA+GGG | 0.425474 | 7_4:+54354039 | Msa1163250:CDS |
| CCTCCAAGATCCAAAGTAAT+GGG | 0.432064 | 7_4:-54352598 | None:intergenic |
| AGAGAAAGTTTATCAACAAT+CGG | 0.432642 | 7_4:-54355090 | None:intergenic |
| CCCATTACTTTGGATCTTGG+AGG | 0.440114 | 7_4:+54352598 | Msa1163250:CDS |
| AGGAGCTTCCAGCAGGTGAC+TGG | 0.452037 | 7_4:+54351697 | Msa1163250:intron |
| CACCACACGCATCATCGTTA+AGG | 0.462154 | 7_4:-54351100 | None:intergenic |
| TAGGATTCATGGACATCAAA+TGG | 0.466229 | 7_4:+54354186 | Msa1163250:intron |
| CAATCTGTGTTGCTACTCTC+AGG | 0.469065 | 7_4:+54354069 | Msa1163250:CDS |
| GGATCTTGGAGGTGAGAAGA+TGG | 0.471084 | 7_4:+54352609 | Msa1163250:CDS |
| TCCTTGCAGGAGCTTCCAGC+AGG | 0.473548 | 7_4:+54351690 | Msa1163250:intron |
| AGGTCTTTATACACTCTTTG+AGG | 0.481813 | 7_4:-54351080 | None:intergenic |
| CAAAATCTCACTTTCAATCA+AGG | 0.485189 | 7_4:+54354668 | Msa1163250:CDS |
| GTTTGAACTCACCGACTCAA+TGG | 0.485586 | 7_4:-54354278 | None:intergenic |
| TCCCGTGCTGTTGATTATGC+CGG | 0.486765 | 7_4:+54354011 | Msa1163250:CDS |
| TTACGAGGAGCTCGTGGGAG+AGG | 0.495433 | 7_4:+54355047 | Msa1163250:CDS |
| ATGCAGTGCCAGTCACCTGC+TGG | 0.507073 | 7_4:-54351705 | None:intergenic |
| TTTGCGTAGATTACATGAAG+TGG | 0.508611 | 7_4:+54352528 | Msa1163250:CDS |
| ACCTCCAAGATCCAAAGTAA+TGG | 0.516234 | 7_4:-54352599 | None:intergenic |
| TGAGGTTTGAAATGCTTCTA+CGG | 0.521495 | 7_4:+54352467 | Msa1163250:CDS |
| CGAGTTAGGTTTAGGAAACA+AGG | 0.521835 | 7_4:+54354232 | Msa1163250:CDS |
| ACATGAAGTGGAAAACAAGA+AGG | 0.524527 | 7_4:+54352540 | Msa1163250:CDS |
| AATAGATATGACATTGGAGA+TGG | 0.525905 | 7_4:+54352490 | Msa1163250:CDS |
| CCAGAATTCTAAGTAGCCAT+TGG | 0.533832 | 7_4:+54352641 | Msa1163250:CDS |
| GAGAAAGTTTATCAACAATC+GGG | 0.534292 | 7_4:-54355089 | None:intergenic |
| GCGTGTGGTGTTTGTAAAGA+CGG | 0.535456 | 7_4:+54351113 | Msa1163250:CDS |
| TACGAGGAGCTCGTGGGAGA+GGG | 0.536841 | 7_4:+54355048 | Msa1163250:CDS |
| AGCTTTCTCAAATCCAAAAG+AGG | 0.538189 | 7_4:-54354546 | None:intergenic |
| CGTGTGGTGTTTGTAAAGAC+GGG | 0.538196 | 7_4:+54351114 | Msa1163250:CDS |
| CAAGACTCAGAAAGCTATCA+GGG | 0.541746 | 7_4:+54354962 | Msa1163250:CDS |
| CTATATGAATGTGGAGATGC+TGG | 0.542228 | 7_4:+54354484 | Msa1163250:CDS |
| TACTGTATTTCTAGAGAAAG+GGG | 0.544754 | 7_4:+54354040 | Msa1163250:CDS |
| ACGATTGAACTCATCACCGT+TGG | 0.545711 | 7_4:-54352112 | None:intergenic |
| TGCGGTGCAATTCTATGGAG+TGG | 0.554170 | 7_4:+54354604 | Msa1163250:CDS |
| GAGCTCCTCGTAATTCATAT+GGG | 0.580394 | 7_4:-54355037 | None:intergenic |
| TGTAACACTTGTAGCGCTGA+TGG | 0.581027 | 7_4:-54354512 | None:intergenic |
| TATGAATTACGAGGAGCTCG+TGG | 0.582788 | 7_4:+54355041 | Msa1163250:CDS |
| CTGAAGACACATCCAATAGC+GGG | 0.584552 | 7_4:-54351777 | None:intergenic |
| CAATGGCATTGAAAAGTCTA+CGG | 0.587830 | 7_4:-54354261 | None:intergenic |
| TCCGGCATAATCAACAGCAC+GGG | 0.592499 | 7_4:-54354012 | None:intergenic |
| ATCCGGCATAATCAACAGCA+CGG | 0.595394 | 7_4:-54354013 | None:intergenic |
| TTCAATCGTGAAAAGTTCTG+TGG | 0.597157 | 7_4:+54352126 | Msa1163250:CDS |
| GGCATTAAGCTATATGAATG+TGG | 0.599720 | 7_4:+54354475 | Msa1163250:intron |
| AGAGAGTCTTGTATTGTCAG+TGG | 0.611720 | 7_4:+54354999 | Msa1163250:CDS |
| CATGAAGTGGAAAACAAGAA+GGG | 0.614500 | 7_4:+54352541 | Msa1163250:CDS |
| CTACGGAATAGATATGACAT+TGG | 0.617609 | 7_4:+54352484 | Msa1163250:CDS |
| ATGAATTACGAGGAGCTCGT+GGG | 0.620885 | 7_4:+54355042 | Msa1163250:CDS |
| AATGGCTACTTAGAATTCTG+GGG | 0.631109 | 7_4:-54352639 | None:intergenic |
| TGTGTTTCCAGATACATCTG+AGG | 0.637646 | 7_4:+54352449 | Msa1163250:intron |
| ACTGAAGACACATCCAATAG+CGG | 0.687331 | 7_4:-54351778 | None:intergenic |
| AGAAAGCTATCAGGGAAGAG+CGG | 0.691891 | 7_4:+54354970 | Msa1163250:CDS |
| GTGTGGTGTTTGTAAAGACG+GGG | 0.709450 | 7_4:+54351115 | Msa1163250:CDS |
| GTAAATTGTGTTGATGCCAA+CGG | 0.717778 | 7_4:+54352096 | Msa1163250:CDS |
| GGTCGCCCATATGAATTACG+AGG | 0.725080 | 7_4:+54355032 | Msa1163250:CDS |
| GACCTTAACGATGATGCGTG+TGG | 0.730115 | 7_4:+54351098 | Msa1163250:CDS |
| TGTGGTGTTTGTAAAGACGG+GGG | 0.769541 | 7_4:+54351116 | Msa1163250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAGTATTAATTTATCATT+AGG | - | chr7_4:54351512-54351531 | None:intergenic | 10.0% |
| !!! | ATACTAATTTAACTTAATTT+TGG | + | chr7_4:54351551-54351570 | Msa1163250:intron | 10.0% |
| !!! | TACTAATTTAACTTAATTTT+GGG | + | chr7_4:54351552-54351571 | Msa1163250:intron | 10.0% |
| !!! | AAACATATAATTTTTGAAAT+AGG | - | chr7_4:54352861-54352880 | None:intergenic | 10.0% |
| !! | TAAAGTCTATTTAATTAAAT+AGG | - | chr7_4:54353344-54353363 | None:intergenic | 10.0% |
| !! | TTATCTAATAAAATAGTTAT+CGG | - | chr7_4:54353647-54353666 | None:intergenic | 10.0% |
| !! | CTGTAAAAAAAAAAATTAAA+TGG | - | chr7_4:54353720-54353739 | None:intergenic | 10.0% |
| !!! | CATTTAATTTTTTTTTTTAC+AGG | + | chr7_4:54353718-54353737 | Msa1163250:intron | 10.0% |
| !! | TTATCTAATAAAATAGTTAT+CGG | - | chr7_4:54353647-54353666 | None:intergenic | 10.0% |
| !!! | TTAAGCTTATTTTCATTATT+TGG | + | chr7_4:54351257-54351276 | Msa1163250:intron | 15.0% |
| !!! | TAAGCTTATTTTCATTATTT+GGG | + | chr7_4:54351258-54351277 | Msa1163250:intron | 15.0% |
| !! | AAAAATAAATCAATACAAAC+AGG | + | chr7_4:54351409-54351428 | Msa1163250:intron | 15.0% |
| !! | AGTTAAATTATTTCAATATG+TGG | - | chr7_4:54351626-54351645 | None:intergenic | 15.0% |
| !!! | AAGTTTTGTTTATTTTTGAT+GGG | - | chr7_4:54351918-54351937 | None:intergenic | 15.0% |
| !!! | AAAGTTTTGTTTATTTTTGA+TGG | - | chr7_4:54351919-54351938 | None:intergenic | 15.0% |
| !! | AATATAGTTATAAAAAAGAG+TGG | - | chr7_4:54352672-54352691 | None:intergenic | 15.0% |
| !! | GTTAAATGTTTCTTATAAAT+AGG | - | chr7_4:54353106-54353125 | None:intergenic | 15.0% |
| !! | TATATTTAGAAACTTCTTAA+TGG | - | chr7_4:54353694-54353713 | None:intergenic | 15.0% |
| !! | TATATTTAGAAACTTCTTAA+TGG | - | chr7_4:54353694-54353713 | None:intergenic | 15.0% |
| !! | GCTGTAAAAAAAAAATTAAA+TGG | - | chr7_4:54353823-54353842 | None:intergenic | 15.0% |
| !!! | TGTTGTAGATATTTTTTTAT+TGG | + | chr7_4:54353955-54353974 | Msa1163250:intron | 15.0% |
| !! | TAATTATGGAGTTTATTAAT+TGG | + | chr7_4:54354158-54354177 | Msa1163250:intron | 15.0% |
| !!! | TCGTGTATTTAATTTAATTT+AGG | + | chr7_4:54354326-54354345 | Msa1163250:intron | 15.0% |
| !!! | CGTGTATTTAATTTAATTTA+GGG | + | chr7_4:54354327-54354346 | Msa1163250:intron | 15.0% |
| !!! | TATACTTTTCTATTTTCTTT+TGG | - | chr7_4:54354637-54354656 | None:intergenic | 15.0% |
| !! | ATAGACATAATCATAGATTA+AGG | - | chr7_4:54351210-54351229 | None:intergenic | 20.0% |
| !!! | AAGCTTATTTTCATTATTTG+GGG | + | chr7_4:54351259-54351278 | Msa1163250:intron | 20.0% |
| !! | AAAAAATAAACCAATCCAAA+TGG | - | chr7_4:54351285-54351304 | None:intergenic | 20.0% |
| !! | TCATTATATGTTAATGACAT+TGG | + | chr7_4:54351483-54351502 | Msa1163250:intron | 20.0% |
| !! | TATTCAGTTAATTAATGAAG+AGG | - | chr7_4:54351867-54351886 | None:intergenic | 20.0% |
| !!! | AGTTTTGTTTATTTTTGATG+GGG | - | chr7_4:54351917-54351936 | None:intergenic | 20.0% |
| !!! | TCATAAGATTTTTAATAGCA+GGG | - | chr7_4:54352998-54353017 | None:intergenic | 20.0% |
| !!! | TTCATAAGATTTTTAATAGC+AGG | - | chr7_4:54352999-54353018 | None:intergenic | 20.0% |
| !! | TTATTTAGTAGCTGATATAT+TGG | - | chr7_4:54353034-54353053 | None:intergenic | 20.0% |
| !! | TAAATAACCAAATCATAAGA+AGG | + | chr7_4:54353047-54353066 | Msa1163250:intron | 20.0% |
| !! | CATTACATAAATGATGTATT+TGG | + | chr7_4:54353136-54353155 | Msa1163250:intron | 20.0% |
| !!! | GTCAACTTTTTCTTATAAAT+AGG | + | chr7_4:54353205-54353224 | Msa1163250:intron | 20.0% |
| !! | GTATTCAACAATATCAATAA+TGG | + | chr7_4:54353238-54353257 | Msa1163250:intron | 20.0% |
| !! | AAAGATATGATTATGAGAAA+GGG | - | chr7_4:54353470-54353489 | None:intergenic | 20.0% |
| !! | AAAAGATATGATTATGAGAA+AGG | - | chr7_4:54353471-54353490 | None:intergenic | 20.0% |
| !! | AAGCTAAAATCAATACTTAA+AGG | + | chr7_4:54353501-54353520 | Msa1163250:intron | 20.0% |
| !! | TAAAAACACAAATAAGATGA+TGG | - | chr7_4:54353584-54353603 | None:intergenic | 20.0% |
| !!! | AGATATTTTGAATGAGTTTA+TGG | + | chr7_4:54353668-54353687 | Msa1163250:intron | 20.0% |
| !!! | AGATATTTTGAATGAGTTTA+TGG | + | chr7_4:54353668-54353687 | Msa1163250:intron | 20.0% |
| !! | TAGAAATACAGTAAAAAATC+CGG | - | chr7_4:54354033-54354052 | None:intergenic | 20.0% |
| !! | GTCGAAAAACATATTAATTA+TGG | + | chr7_4:54354144-54354163 | Msa1163250:intron | 20.0% |
| !! | AGTTTATTAATTGGTGAAAT+AGG | + | chr7_4:54354167-54354186 | Msa1163250:intron | 20.0% |
| !! | AATGCTAAGAAACTAAATAT+AGG | + | chr7_4:54354351-54354370 | Msa1163250:intron | 20.0% |
| !! | TAACGATCAAAGTTATTTAA+AGG | - | chr7_4:54354871-54354890 | None:intergenic | 20.0% |
| !!! | CTCTAAAATGATAAGATCAA+AGG | - | chr7_4:54351435-54351454 | None:intergenic | 25.0% |
| ! | TACTTTATGTTTGTGTATAG+AGG | + | chr7_4:54352312-54352331 | Msa1163250:intron | 25.0% |
| ! | TCTTCTCTAAATTGAGAAAA+GGG | - | chr7_4:54352369-54352388 | None:intergenic | 25.0% |
| ! | GAAATATCCATCTACATTAT+CGG | + | chr7_4:54352728-54352747 | Msa1163250:intron | 25.0% |
| ! | ATGAAAAATAATACTTCCTC+CGG | + | chr7_4:54353079-54353098 | Msa1163250:intron | 25.0% |
| ! | ATGTTTCTTATAAATAGGAC+CGG | - | chr7_4:54353101-54353120 | None:intergenic | 25.0% |
| !! | CTTTTTCTTATAAATAGGAC+CGG | + | chr7_4:54353210-54353229 | Msa1163250:intron | 25.0% |
| ! | AGTCTATTCAAAATCTAACT+CGG | - | chr7_4:54353407-54353426 | None:intergenic | 25.0% |
| ! | AAGATATGATTATGAGAAAG+GGG | - | chr7_4:54353469-54353488 | None:intergenic | 25.0% |
| ! | TTATTAACACGTAAGAAAAC+TGG | - | chr7_4:54353608-54353627 | None:intergenic | 25.0% |
| ! | TACGTGTTAATAATTACTAG+TGG | + | chr7_4:54353615-54353634 | Msa1163250:intron | 25.0% |
| ! | TATGTTCTTATTATCTTGTC+AGG | + | chr7_4:54353982-54354001 | Msa1163250:intron | 25.0% |
| !!! | TTTACTGTATTTCTAGAGAA+AGG | + | chr7_4:54354038-54354057 | Msa1163250:CDS | 25.0% |
| !!! | TTACTGTATTTCTAGAGAAA+GGG | + | chr7_4:54354039-54354058 | Msa1163250:CDS | 25.0% |
| ! | AGAGACAAGTTAATAAGTTT+AGG | - | chr7_4:54354303-54354322 | None:intergenic | 25.0% |
| ! | CTCTTTATCTTGTGTATTTA+GGG | + | chr7_4:54354408-54354427 | Msa1163250:intron | 25.0% |
| ! | ATTGCTGAATAAGAAAAATG+CGG | + | chr7_4:54354586-54354605 | Msa1163250:CDS | 25.0% |
| !! | TATACATGTACAGTTTTTCT+AGG | + | chr7_4:54354714-54354733 | Msa1163250:intron | 25.0% |
| AACTTTGATGAAAAACTGCT+GGG | - | chr7_4:54351166-54351185 | None:intergenic | 30.0% | |
| ! | CTTCATAAGATGTTTTGCAT+AGG | + | chr7_4:54351383-54351402 | Msa1163250:intron | 30.0% |
| ! | ATTTTCACTTCCTTCTTGAT+AGG | - | chr7_4:54351757-54351776 | None:intergenic | 30.0% |
| AGAAGAAGAGAAAATACATC+TGG | - | chr7_4:54351823-54351842 | None:intergenic | 30.0% | |
| ACCTTTATGATGCATTGAAA+AGG | + | chr7_4:54352002-54352021 | Msa1163250:intron | 30.0% | |
| ! | TCCTTTTCAATGCATCATAA+AGG | - | chr7_4:54352006-54352025 | None:intergenic | 30.0% |
| TCTCGTCGCTAAAATTTAAA+TGG | + | chr7_4:54352245-54352264 | Msa1163250:intron | 30.0% | |
| TGTTCAATATCTTACCTCTT+TGG | + | chr7_4:54352336-54352355 | Msa1163250:intron | 30.0% | |
| GTTCAATATCTTACCTCTTT+GGG | + | chr7_4:54352337-54352356 | Msa1163250:intron | 30.0% | |
| GTCTTCTCTAAATTGAGAAA+AGG | - | chr7_4:54352370-54352389 | None:intergenic | 30.0% | |
| AATAGATATGACATTGGAGA+TGG | + | chr7_4:54352490-54352509 | Msa1163250:CDS | 30.0% | |
| !! | GTGTTTTAAACCCATTACTT+TGG | + | chr7_4:54352588-54352607 | Msa1163250:CDS | 30.0% |
| !! | CATGATGCTCTAAAAAAACT+TGG | + | chr7_4:54352760-54352779 | Msa1163250:intron | 30.0% |
| !!! | TTTTGAAATAGGTCAGACTT+AGG | - | chr7_4:54352850-54352869 | None:intergenic | 30.0% |
| ! | TTGTCATAGACTCATTTTCA+AGG | + | chr7_4:54352897-54352916 | Msa1163250:intron | 30.0% |
| ! | GCTTAACCTAGCATTTTTAA+AGG | + | chr7_4:54352919-54352938 | Msa1163250:intron | 30.0% |
| !! | ATAGACTTTCAAGTTTCATC+AGG | - | chr7_4:54352945-54352964 | None:intergenic | 30.0% |
| ATTCAAGCCTTCTTATGATT+TGG | - | chr7_4:54353057-54353076 | None:intergenic | 30.0% | |
| ! | TTTTGAATAGACTAGACTGT+AGG | + | chr7_4:54353414-54353433 | Msa1163250:intron | 30.0% |
| !! | TACTGTATTTCTAGAGAAAG+GGG | + | chr7_4:54354040-54354059 | Msa1163250:CDS | 30.0% |
| AATTGGTGAAATAGGATTCA+TGG | + | chr7_4:54354175-54354194 | Msa1163250:intron | 30.0% | |
| GCTCTTTATCTTGTGTATTT+AGG | + | chr7_4:54354407-54354426 | Msa1163250:intron | 30.0% | |
| ! | TTGAAAGTGAGATTTTGTTC+AGG | - | chr7_4:54354665-54354684 | None:intergenic | 30.0% |
| CAAAATCTCACTTTCAATCA+AGG | + | chr7_4:54354668-54354687 | Msa1163250:CDS | 30.0% | |
| ! | AGGTATGTATACATTTTACG+TGG | + | chr7_4:54354688-54354707 | Msa1163250:intron | 30.0% |
| AGGTCTTTATACACTCTTTG+AGG | - | chr7_4:54351083-54351102 | None:intergenic | 35.0% | |
| CAACTTTGATGAAAAACTGC+TGG | - | chr7_4:54351167-54351186 | None:intergenic | 35.0% | |
| ! | TTTCATTATTTGGGGCCATT+TGG | + | chr7_4:54351267-54351286 | Msa1163250:intron | 35.0% |
| !!! | CTTCTTCATTTTTTCCTTGC+AGG | + | chr7_4:54351677-54351696 | Msa1163250:intron | 35.0% |
| ! | CACTGCTCTTGTAAATTTTG+TGG | + | chr7_4:54351729-54351748 | Msa1163250:CDS | 35.0% |
| ! | TTTTGTGGATCCTATCAAGA+AGG | + | chr7_4:54351744-54351763 | Msa1163250:CDS | 35.0% |
| ! | GTAAATTGTGTTGATGCCAA+CGG | + | chr7_4:54352096-54352115 | Msa1163250:CDS | 35.0% |
| TTCAATCGTGAAAAGTTCTG+TGG | + | chr7_4:54352126-54352145 | Msa1163250:CDS | 35.0% | |
| AAAAGGGATATAACCCAAAG+AGG | - | chr7_4:54352353-54352372 | None:intergenic | 35.0% | |
| TTTCAAACCTCAGATGTATC+TGG | - | chr7_4:54352459-54352478 | None:intergenic | 35.0% | |
| ! | TGAGGTTTGAAATGCTTCTA+CGG | + | chr7_4:54352467-54352486 | Msa1163250:CDS | 35.0% |
| CTACGGAATAGATATGACAT+TGG | + | chr7_4:54352484-54352503 | Msa1163250:CDS | 35.0% | |
| TTTGCGTAGATTACATGAAG+TGG | + | chr7_4:54352528-54352547 | Msa1163250:CDS | 35.0% | |
| ACATGAAGTGGAAAACAAGA+AGG | + | chr7_4:54352540-54352559 | Msa1163250:CDS | 35.0% | |
| CATGAAGTGGAAAACAAGAA+GGG | + | chr7_4:54352541-54352560 | Msa1163250:CDS | 35.0% | |
| AAACCCATTACTTTGGATCT+TGG | + | chr7_4:54352595-54352614 | Msa1163250:CDS | 35.0% | |
| AATGGCTACTTAGAATTCTG+GGG | - | chr7_4:54352642-54352661 | None:intergenic | 35.0% | |
| CAATGGCTACTTAGAATTCT+GGG | - | chr7_4:54352643-54352662 | None:intergenic | 35.0% | |
| ATTCTAAGTAGCCATTGGTA+AGG | + | chr7_4:54352646-54352665 | Msa1163250:intron | 35.0% | |
| TGAGTAACCGATAATGTAGA+TGG | - | chr7_4:54352738-54352757 | None:intergenic | 35.0% | |
| CAACATCTCATCTCCTAATA+GGG | + | chr7_4:54352788-54352807 | Msa1163250:intron | 35.0% | |
| CTCCTAATAGGGATGAAAAT+AGG | + | chr7_4:54352799-54352818 | Msa1163250:intron | 35.0% | |
| ! | AGCCTATTTTCATCCCTATT+AGG | - | chr7_4:54352804-54352823 | None:intergenic | 35.0% |
| ! | ATCAGGCCTTTAAAAATGCT+AGG | - | chr7_4:54352928-54352947 | None:intergenic | 35.0% |
| TTTCTTATAAATAGGACCGG+AGG | - | chr7_4:54353213-54353232 | None:intergenic | 35.0% | |
| TTTCTTATAAATAGGACCGG+AGG | + | chr7_4:54353213-54353232 | Msa1163250:intron | 35.0% | |
| TTCTTATAAATAGGACCGGA+GGG | + | chr7_4:54353214-54353233 | Msa1163250:intron | 35.0% | |
| ATATTGTTGAATACTCCCTC+CGG | - | chr7_4:54353232-54353251 | None:intergenic | 35.0% | |
| ACTCGTTCAACAAAAAGACT+GGG | - | chr7_4:54353380-54353399 | None:intergenic | 35.0% | |
| AACTCGTTCAACAAAAAGAC+TGG | - | chr7_4:54353381-54353400 | None:intergenic | 35.0% | |
| ! | AGTCTTTTTGTTGAACGAGT+TGG | + | chr7_4:54353380-54353399 | Msa1163250:intron | 35.0% |
| TTACATCACAATGATTCGAG+TGG | - | chr7_4:54353541-54353560 | None:intergenic | 35.0% | |
| ! | TCGAATGTTATTTGCTTCGA+AGG | - | chr7_4:54353900-54353919 | None:intergenic | 35.0% |
| ! | ATAACATTCGATGTATCGAC+TGG | + | chr7_4:54353909-54353928 | Msa1163250:intron | 35.0% |
| TAGGATTCATGGACATCAAA+TGG | + | chr7_4:54354186-54354205 | Msa1163250:intron | 35.0% | |
| CTAACTCGTGTTCCAATAAA+TGG | - | chr7_4:54354220-54354239 | None:intergenic | 35.0% | |
| CATTTATTGGAACACGAGTT+AGG | + | chr7_4:54354218-54354237 | Msa1163250:CDS | 35.0% | |
| ! | CAATGGCATTGAAAAGTCTA+CGG | - | chr7_4:54354264-54354283 | None:intergenic | 35.0% |
| ! | ACTTTTCAATGCCATTGAGT+CGG | + | chr7_4:54354267-54354286 | Msa1163250:CDS | 35.0% |
| GGCATTAAGCTATATGAATG+TGG | + | chr7_4:54354475-54354494 | Msa1163250:intron | 35.0% | |
| AGCTTTCTCAAATCCAAAAG+AGG | - | chr7_4:54354549-54354568 | None:intergenic | 35.0% | |
| AAAAATGCGGTGCAATTCTA+TGG | + | chr7_4:54354599-54354618 | Msa1163250:CDS | 35.0% | |
| !! | AGTTTTTCTAGGAGCCATAT+GGG | + | chr7_4:54354725-54354744 | Msa1163250:intron | 35.0% |
| ! | GATTTTCATGTTAGCCCATA+TGG | - | chr7_4:54354742-54354761 | None:intergenic | 35.0% |
| ! | TTATTTGGGGCCATTTGGAT+TGG | + | chr7_4:54351272-54351291 | Msa1163250:intron | 40.0% |
| ACTGAAGACACATCCAATAG+CGG | - | chr7_4:54351781-54351800 | None:intergenic | 40.0% | |
| AATGCATCATAAAGGTGACG+AGG | - | chr7_4:54351998-54352017 | None:intergenic | 40.0% | |
| CTGTGGAAAAAGATGTCAAC+AGG | + | chr7_4:54352143-54352162 | Msa1163250:CDS | 40.0% | |
| TGTGTTTCCAGATACATCTG+AGG | + | chr7_4:54352449-54352468 | Msa1163250:intron | 40.0% | |
| CCTCCAAGATCCAAAGTAAT+GGG | - | chr7_4:54352601-54352620 | None:intergenic | 40.0% | |
| ACCTCCAAGATCCAAAGTAA+TGG | - | chr7_4:54352602-54352621 | None:intergenic | 40.0% | |
| CCAATGGCTACTTAGAATTC+TGG | - | chr7_4:54352644-54352663 | None:intergenic | 40.0% | |
| CCAGAATTCTAAGTAGCCAT+TGG | + | chr7_4:54352641-54352660 | Msa1163250:CDS | 40.0% | |
| ! | AAAAAGAGTGGCCTTACCAA+TGG | - | chr7_4:54352660-54352679 | None:intergenic | 40.0% |
| CCTATTAGGAGATGAGATGT+TGG | - | chr7_4:54352790-54352809 | None:intergenic | 40.0% | |
| CCAACATCTCATCTCCTAAT+AGG | + | chr7_4:54352787-54352806 | Msa1163250:intron | 40.0% | |
| GGATGAAAATAGGCTAAGCT+GGG | + | chr7_4:54352809-54352828 | Msa1163250:intron | 40.0% | |
| ! | ATGGCAGAGATGCCATTTAT+TGG | + | chr7_4:54354205-54354224 | Msa1163250:CDS | 40.0% |
| TTGGAACACGAGTTAGGTTT+AGG | + | chr7_4:54354224-54354243 | Msa1163250:CDS | 40.0% | |
| CGAGTTAGGTTTAGGAAACA+AGG | + | chr7_4:54354232-54354251 | Msa1163250:CDS | 40.0% | |
| AATGCCTGCAGATATATGCA+TGG | - | chr7_4:54354461-54354480 | None:intergenic | 40.0% | |
| CTATATGAATGTGGAGATGC+TGG | + | chr7_4:54354484-54354503 | Msa1163250:CDS | 40.0% | |
| !! | CAGTTTTTCTAGGAGCCATA+TGG | + | chr7_4:54354724-54354743 | Msa1163250:intron | 40.0% |
| ACAAGACTCAGAAAGCTATC+AGG | + | chr7_4:54354961-54354980 | Msa1163250:CDS | 40.0% | |
| CAAGACTCAGAAAGCTATCA+GGG | + | chr7_4:54354962-54354981 | Msa1163250:CDS | 40.0% | |
| ! | AGAGAGTCTTGTATTGTCAG+TGG | + | chr7_4:54354999-54355018 | Msa1163250:CDS | 40.0% |
| ATTGTCAGTGGAAGAACTTC+AGG | + | chr7_4:54355011-54355030 | Msa1163250:CDS | 40.0% | |
| GAGCTCCTCGTAATTCATAT+GGG | - | chr7_4:54355040-54355059 | None:intergenic | 40.0% | |
| GCGTGTGGTGTTTGTAAAGA+CGG | + | chr7_4:54351113-54351132 | Msa1163250:CDS | 45.0% | |
| CGTGTGGTGTTTGTAAAGAC+GGG | + | chr7_4:54351114-54351133 | Msa1163250:CDS | 45.0% | |
| GTGTGGTGTTTGTAAAGACG+GGG | + | chr7_4:54351115-54351134 | Msa1163250:CDS | 45.0% | |
| TGTGGTGTTTGTAAAGACGG+GGG | + | chr7_4:54351116-54351135 | Msa1163250:CDS | 45.0% | |
| ! | TGGGTGACATTTTCACGAGA+AGG | + | chr7_4:54351571-54351590 | Msa1163250:intron | 45.0% |
| GGAAGTGAAAATCCCGCTAT+TGG | + | chr7_4:54351765-54351784 | Msa1163250:CDS | 45.0% | |
| CTGAAGACACATCCAATAGC+GGG | - | chr7_4:54351780-54351799 | None:intergenic | 45.0% | |
| ACGATTGAACTCATCACCGT+TGG | - | chr7_4:54352115-54352134 | None:intergenic | 45.0% | |
| CCCATTACTTTGGATCTTGG+AGG | + | chr7_4:54352598-54352617 | Msa1163250:CDS | 45.0% | |
| GGGATGAAAATAGGCTAAGC+TGG | + | chr7_4:54352808-54352827 | Msa1163250:intron | 45.0% | |
| GAAAATAGGCTAAGCTGGGT+CGG | + | chr7_4:54352813-54352832 | Msa1163250:intron | 45.0% | |
| AAAATAGGCTAAGCTGGGTC+GGG | + | chr7_4:54352814-54352833 | Msa1163250:intron | 45.0% | |
| GAATAGACTAGACTGTAGGC+TGG | + | chr7_4:54353418-54353437 | Msa1163250:intron | 45.0% | |
| !! | ACATTCGATGTATCGACTGG+TGG | + | chr7_4:54353912-54353931 | Msa1163250:intron | 45.0% |
| ATCCGGCATAATCAACAGCA+CGG | - | chr7_4:54354016-54354035 | None:intergenic | 45.0% | |
| ! | CAATCTGTGTTGCTACTCTC+AGG | + | chr7_4:54354069-54354088 | Msa1163250:CDS | 45.0% |
| !! | GTTTGAACTCACCGACTCAA+TGG | - | chr7_4:54354281-54354300 | None:intergenic | 45.0% |
| GCTACCATGCATATATCTGC+AGG | + | chr7_4:54354454-54354473 | Msa1163250:intron | 45.0% | |
| ! | TGTAACACTTGTAGCGCTGA+TGG | - | chr7_4:54354515-54354534 | None:intergenic | 45.0% |
| CGCTACAAGTGTTACACACT+TGG | + | chr7_4:54354519-54354538 | Msa1163250:CDS | 45.0% | |
| ! | CACACTTGGACTTCCTCTTT+TGG | + | chr7_4:54354533-54354552 | Msa1163250:CDS | 45.0% |
| AGAAAGCTATCAGGGAAGAG+CGG | + | chr7_4:54354970-54354989 | Msa1163250:CDS | 45.0% | |
| CGAGCTCCTCGTAATTCATA+TGG | - | chr7_4:54355041-54355060 | None:intergenic | 45.0% | |
| TATGAATTACGAGGAGCTCG+TGG | + | chr7_4:54355041-54355060 | Msa1163250:CDS | 45.0% | |
| ATGAATTACGAGGAGCTCGT+GGG | + | chr7_4:54355042-54355061 | Msa1163250:CDS | 45.0% | |
| GACCTTAACGATGATGCGTG+TGG | + | chr7_4:54351098-54351117 | Msa1163250:CDS | 50.0% | |
| CACCACACGCATCATCGTTA+AGG | - | chr7_4:54351103-54351122 | None:intergenic | 50.0% | |
| GGATCTTGGAGGTGAGAAGA+TGG | + | chr7_4:54352609-54352628 | Msa1163250:CDS | 50.0% | |
| ACTAGACTGTAGGCTGGTGT+CGG | + | chr7_4:54353424-54353443 | Msa1163250:intron | 50.0% | |
| ! | TCCCGTGCTGTTGATTATGC+CGG | + | chr7_4:54354011-54354030 | Msa1163250:CDS | 50.0% |
| TCCGGCATAATCAACAGCAC+GGG | - | chr7_4:54354015-54354034 | None:intergenic | 50.0% | |
| TGCGGTGCAATTCTATGGAG+TGG | + | chr7_4:54354604-54354623 | Msa1163250:CDS | 50.0% | |
| GGTCGCCCATATGAATTACG+AGG | + | chr7_4:54355032-54355051 | Msa1163250:CDS | 50.0% | |
| TCCTTGCAGGAGCTTCCAGC+AGG | + | chr7_4:54351690-54351709 | Msa1163250:intron | 60.0% | |
| ACCTGCTGGAAGCTCCTGCA+AGG | - | chr7_4:54351694-54351713 | None:intergenic | 60.0% | |
| AGGAGCTTCCAGCAGGTGAC+TGG | + | chr7_4:54351697-54351716 | Msa1163250:intron | 60.0% | |
| ATGCAGTGCCAGTCACCTGC+TGG | - | chr7_4:54351708-54351727 | None:intergenic | 60.0% | |
| ! | GACTGTAGGCTGGTGTCGGA+TGG | + | chr7_4:54353428-54353447 | Msa1163250:intron | 60.0% |
| TTACGAGGAGCTCGTGGGAG+AGG | + | chr7_4:54355047-54355066 | Msa1163250:CDS | 60.0% | |
| TACGAGGAGCTCGTGGGAGA+GGG | + | chr7_4:54355048-54355067 | Msa1163250:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 54351068 | 54355100 | 54351068 | ID=Msa1163250;Name=Msa1163250 |
| chr7_4 | mRNA | 54351068 | 54355100 | 54351068 | ID=Msa1163250-mRNA-1;Parent=Msa1163250;Name=Msa1163250-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|8|0|355 |
| chr7_4 | exon | 54351068 | 54351199 | 54351068 | ID=Msa1163250-mRNA-1:exon:15797;Parent=Msa1163250-mRNA-1 |
| chr7_4 | exon | 54351699 | 54351804 | 54351699 | ID=Msa1163250-mRNA-1:exon:15798;Parent=Msa1163250-mRNA-1 |
| chr7_4 | exon | 54352091 | 54352164 | 54352091 | ID=Msa1163250-mRNA-1:exon:15799;Parent=Msa1163250-mRNA-1 |
| chr7_4 | exon | 54352460 | 54352662 | 54352460 | ID=Msa1163250-mRNA-1:exon:15800;Parent=Msa1163250-mRNA-1 |
| chr7_4 | exon | 54354004 | 54354090 | 54354004 | ID=Msa1163250-mRNA-1:exon:15801;Parent=Msa1163250-mRNA-1 |
| chr7_4 | exon | 54354189 | 54354288 | 54354189 | ID=Msa1163250-mRNA-1:exon:15802;Parent=Msa1163250-mRNA-1 |
| chr7_4 | exon | 54354476 | 54354689 | 54354476 | ID=Msa1163250-mRNA-1:exon:15803;Parent=Msa1163250-mRNA-1 |
| chr7_4 | exon | 54354949 | 54355100 | 54354949 | ID=Msa1163250-mRNA-1:exon:15804;Parent=Msa1163250-mRNA-1 |
| chr7_4 | CDS | 54351068 | 54351199 | 54351068 | ID=Msa1163250-mRNA-1:cds;Parent=Msa1163250-mRNA-1 |
| chr7_4 | CDS | 54351699 | 54351804 | 54351699 | ID=Msa1163250-mRNA-1:cds;Parent=Msa1163250-mRNA-1 |
| chr7_4 | CDS | 54352091 | 54352164 | 54352091 | ID=Msa1163250-mRNA-1:cds;Parent=Msa1163250-mRNA-1 |
| chr7_4 | CDS | 54352460 | 54352662 | 54352460 | ID=Msa1163250-mRNA-1:cds;Parent=Msa1163250-mRNA-1 |
| chr7_4 | CDS | 54354004 | 54354090 | 54354004 | ID=Msa1163250-mRNA-1:cds;Parent=Msa1163250-mRNA-1 |
| chr7_4 | CDS | 54354189 | 54354288 | 54354189 | ID=Msa1163250-mRNA-1:cds;Parent=Msa1163250-mRNA-1 |
| chr7_4 | CDS | 54354476 | 54354689 | 54354476 | ID=Msa1163250-mRNA-1:cds;Parent=Msa1163250-mRNA-1 |
| chr7_4 | CDS | 54354949 | 54355100 | 54354949 | ID=Msa1163250-mRNA-1:cds;Parent=Msa1163250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
