Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166840 | XP_013450272.2 | 95.969 | 521 | 20 | 1 | 1 | 520 | 1 | 521 | 0.0 | 986 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166840 | sp|Q67XX3|FB252_ARATH | 73.319 | 461 | 116 | 5 | 62 | 520 | 47 | 502 | 0.0 | 695 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166840 | A0A396HD35 | 95.969 | 521 | 20 | 1 | 1 | 520 | 1 | 521 | 0.0 | 986 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1166840 | TR | Jumonji |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166840 | MtrunA17_Chr7g0268031 | 95.969 | 521 | 20 | 1 | 1 | 520 | 1 | 521 | 0.0 | 986 |
| Msa1166840 | MtrunA17_Chr3g0132281 | 39.344 | 366 | 209 | 8 | 89 | 444 | 13 | 375 | 2.40e-74 | 253 |
| Msa1166840 | MtrunA17_Chr3g0117261 | 26.990 | 289 | 148 | 10 | 210 | 444 | 18 | 297 | 3.20e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166840 | AT5G06550.1 | 73.319 | 461 | 116 | 5 | 62 | 520 | 47 | 502 | 0.0 | 695 |
| Msa1166840 | AT1G78280.1 | 39.837 | 369 | 207 | 9 | 86 | 444 | 5 | 368 | 2.36e-79 | 267 |
| Msa1166840 | AT5G63080.1 | 27.758 | 281 | 155 | 9 | 210 | 451 | 12 | 283 | 4.18e-18 | 87.4 |
Find 151 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGATTTGTTTGGTGTTT+TGG | 0.172983 | 7_4:-59002623 | Msa1166840:CDS |
| TCTATAATCAGCCGCAAATT+TGG | 0.187726 | 7_4:+59000955 | None:intergenic |
| TTCCAAGCTGAAGTTGAATT+TGG | 0.188370 | 7_4:+59002529 | None:intergenic |
| ATGAAGCTTAAGGACTATTT+TGG | 0.203220 | 7_4:-59002754 | Msa1166840:CDS |
| TCTACCTTTGTTGTTTCTAA+TGG | 0.205554 | 7_4:-59003084 | Msa1166840:CDS |
| GGCAATCTCTATTTCAATTC+AGG | 0.206986 | 7_4:-59003321 | Msa1166840:CDS |
| GATTATAGGTGGATTATTAT+TGG | 0.211885 | 7_4:-59002586 | Msa1166840:CDS |
| GAATTGGGATAGAGATTATT+TGG | 0.233632 | 7_4:-59002824 | Msa1166840:CDS |
| GTTGATGGGTTTCAGTATAA+TGG | 0.244611 | 7_4:-59003117 | Msa1166840:CDS |
| TGGAAGGGTGTATTGATAAT+TGG | 0.249263 | 7_4:-59002858 | Msa1166840:CDS |
| TGGTAATAGTTTAGGGGTTT+TGG | 0.265190 | 7_4:-59003214 | Msa1166840:CDS |
| TCAAAGGAACACTAGACTTT+AGG | 0.265500 | 7_4:+59000846 | None:intergenic |
| TGTTAGGAAGAGAGGGATTT+CGG | 0.288689 | 7_4:-59002929 | Msa1166840:CDS |
| GAGCTTGTTCTTGATATTCT+AGG | 0.289370 | 7_4:-59003246 | Msa1166840:CDS |
| GGGTACCCTTTGTTTGATAT+CGG | 0.290302 | 7_4:-59003063 | Msa1166840:CDS |
| AGAAGGAAAGTTTCCTTTGC+TGG | 0.297251 | 7_4:+59001067 | None:intergenic |
| CTACCTTTGTTGTTTCTAAT+GGG | 0.312871 | 7_4:-59003083 | Msa1166840:CDS |
| CAAAGGAACACTAGACTTTA+GGG | 0.316680 | 7_4:+59000847 | None:intergenic |
| ATTGGGATGCATTGAGGAAT+TGG | 0.321571 | 7_4:-59002840 | Msa1166840:CDS |
| TAATGGAAGAAATGGGGTTT+TGG | 0.321890 | 7_4:+59003451 | None:intergenic |
| GAAGAGAGGGATTTCGGTTG+AGG | 0.331066 | 7_4:-59002923 | Msa1166840:CDS |
| TCATATTCCAAACCCAATTT+CGG | 0.340210 | 7_4:+59002664 | None:intergenic |
| GCAAAGGAAACTTTCCTTCT+GGG | 0.341277 | 7_4:-59001064 | Msa1166840:CDS |
| TTTATGGTGCAACAAAGAAT+TGG | 0.346410 | 7_4:-59002378 | Msa1166840:CDS |
| GATAATATTGTTAGGAAGAG+AGG | 0.347047 | 7_4:-59002937 | Msa1166840:CDS |
| AACCATTCAATTATTGAAAC+AGG | 0.349564 | 7_4:+59002409 | None:intergenic |
| AGCAAAGGAAACTTTCCTTC+TGG | 0.361388 | 7_4:-59001065 | Msa1166840:CDS |
| GGGAATGTTTGGTATCAAAA+TGG | 0.363594 | 7_4:-59003709 | None:intergenic |
| TTGATGGGTTTCAGTATAAT+GGG | 0.365569 | 7_4:-59003116 | Msa1166840:CDS |
| AAAAGTTCCGAAATTGGGTT+TGG | 0.367524 | 7_4:-59002671 | Msa1166840:CDS |
| TATGTATGAATTTCTTTAGA+AGG | 0.368491 | 7_4:+59001002 | None:intergenic |
| AACGCAAGCACACTGGTATC+TGG | 0.370811 | 7_4:-59001195 | Msa1166840:CDS |
| GCCCAGTGGTTGGTGGCATT+TGG | 0.374870 | 7_4:-59002305 | Msa1166840:CDS |
| CTTTGGTTTGGTATGGTGGC+TGG | 0.376278 | 7_4:+59003601 | None:intergenic |
| TGGAGAGGGATAATATTGTT+AGG | 0.381335 | 7_4:-59002945 | Msa1166840:CDS |
| CACCCACGGTGTTCAGCCCT+TGG | 0.382559 | 7_4:-59003343 | Msa1166840:CDS |
| TTGGGATGCATTGAGGAATT+GGG | 0.385650 | 7_4:-59002839 | Msa1166840:CDS |
| TGATCAAGGGGTCGAAGAAA+TGG | 0.385678 | 7_4:-59002501 | Msa1166840:CDS |
| GAAATGAGAGGCCTGATTAT+AGG | 0.387216 | 7_4:-59002600 | Msa1166840:CDS |
| ACCAGTGTCTCTGGAGTTGA+TGG | 0.391428 | 7_4:+59003296 | None:intergenic |
| GAGAAATTTGTTAAGTGTCT+TGG | 0.391444 | 7_4:-59001235 | Msa1166840:CDS |
| GGAAGGGTGTATTGATAATT+GGG | 0.393852 | 7_4:-59002857 | Msa1166840:CDS |
| TTGGTATGGTGGCTGGACTC+TGG | 0.395201 | 7_4:+59003608 | None:intergenic |
| ATTATTGGACCAGCTGGGTC+TGG | 0.396567 | 7_4:-59002571 | Msa1166840:CDS |
| GAACACCGTGGGTGTGTGAC+GGG | 0.400221 | 7_4:+59003352 | None:intergenic |
| TCACTAATCATGAACCCCTT+TGG | 0.406513 | 7_4:-59003164 | Msa1166840:CDS |
| GGTTAATAAGCCGGTGTTGT+TGG | 0.408373 | 7_4:-59002878 | Msa1166840:CDS |
| GGGTTTGGAATATGAAGTTC+CGG | 0.409696 | 7_4:-59002656 | Msa1166840:CDS |
| ATAATAATCCACCTATAATC+AGG | 0.413924 | 7_4:+59002589 | None:intergenic |
| CTCCTGTTTCAATAATTGAA+TGG | 0.415829 | 7_4:-59002411 | Msa1166840:CDS |
| ATTACCTAAACCAGTGTCTC+TGG | 0.422088 | 7_4:+59003287 | None:intergenic |
| GATGCTACCTCTGCACCATC+AGG | 0.424520 | 7_4:+59002433 | None:intergenic |
| TTAGGGTCCACATATGCAAT+TGG | 0.427525 | 7_4:+59000864 | None:intergenic |
| TCAGATTGCTGACTTTGGTT+TGG | 0.427834 | 7_4:+59003589 | None:intergenic |
| AGCTTGGAATGCTGTGATCA+AGG | 0.428224 | 7_4:-59002515 | Msa1166840:CDS |
| AGCTTGTTCTTGATATTCTA+GGG | 0.429419 | 7_4:-59003245 | Msa1166840:CDS |
| AACTCCAGAGACACTGGTTT+AGG | 0.430834 | 7_4:-59003291 | Msa1166840:CDS |
| TGGATTATTATTGGACCAGC+TGG | 0.431844 | 7_4:-59002577 | Msa1166840:CDS |
| TTCACTAGCTAAGAAATGGC+TGG | 0.433037 | 7_4:-59000810 | Msa1166840:three_prime_UTR |
| TTGATATCGGGAGTCGCGTT+CGG | 0.433562 | 7_4:-59003050 | Msa1166840:CDS |
| CTGACTTTGGTTTGGTATGG+TGG | 0.433563 | 7_4:+59003597 | None:intergenic |
| GCTTTACATATGCACTCAAT+TGG | 0.441061 | 7_4:+59002346 | None:intergenic |
| GGTACCCTTTGTTTGATATC+GGG | 0.441137 | 7_4:-59003062 | Msa1166840:CDS |
| CAGAAATCCAATTGCATATG+TGG | 0.444939 | 7_4:-59000871 | Msa1166840:three_prime_UTR |
| TGAACACCGTGGGTGTGTGA+CGG | 0.450073 | 7_4:+59003351 | None:intergenic |
| GATTTCGGTTGAGGAGTTTG+TGG | 0.461360 | 7_4:-59002914 | Msa1166840:CDS |
| ATCCAAATTCAACTTCAGCT+TGG | 0.469977 | 7_4:-59002531 | Msa1166840:CDS |
| CACACTGGTATCTGGAACAA+AGG | 0.473108 | 7_4:-59001187 | Msa1166840:CDS |
| GATACCAGTGTGCTTGCGTT+CGG | 0.473719 | 7_4:+59001198 | None:intergenic |
| TTGCTGACTTTGGTTTGGTA+TGG | 0.474340 | 7_4:+59003594 | None:intergenic |
| GTGTCTTGGAGTTTCTTAAG+AGG | 0.477250 | 7_4:-59001221 | Msa1166840:CDS |
| AATAAGCCGGTGTTGTTGGA+AGG | 0.481648 | 7_4:-59002874 | Msa1166840:CDS |
| AAGTTACTGATCCAAATTTG+CGG | 0.481971 | 7_4:-59000966 | Msa1166840:three_prime_UTR |
| TGTAATCAGATTGCTGACTT+TGG | 0.487706 | 7_4:+59003584 | None:intergenic |
| GCTTGGAATGCTGTGATCAA+GGG | 0.490367 | 7_4:-59002514 | Msa1166840:CDS |
| CACCAAATGCCACCAACCAC+TGG | 0.491804 | 7_4:+59002303 | None:intergenic |
| TTTGATGTCGAAACATTCTT+CGG | 0.495045 | 7_4:+59003383 | None:intergenic |
| TGAAAGGTGAATGGTTGGAG+AGG | 0.498202 | 7_4:-59002960 | Msa1166840:CDS |
| ACCCACGGTGTTCAGCCCTT+GGG | 0.502505 | 7_4:-59003342 | Msa1166840:CDS |
| TAACACAAAACTACGTTAGC+AGG | 0.505548 | 7_4:-59002255 | Msa1166840:intron |
| GCCTGTGGAGATGAAGCTTA+AGG | 0.506931 | 7_4:-59002764 | Msa1166840:CDS |
| GATCAAGGGGTCGAAGAAAT+GGG | 0.508230 | 7_4:-59002500 | Msa1166840:CDS |
| CAGATCAAGTTAGAGAAGAA+AGG | 0.508713 | 7_4:-59002726 | Msa1166840:CDS |
| CCTTTGGAGGAATCTTGTGT+TGG | 0.509661 | 7_4:-59003148 | Msa1166840:CDS |
| CTAATCATGAACCCCTTTGG+AGG | 0.514583 | 7_4:-59003161 | Msa1166840:CDS |
| CAACACAAGATTCCTCCAAA+GGG | 0.515604 | 7_4:+59003149 | None:intergenic |
| GTCAGTTCATCAATTGCTCC+AGG | 0.519066 | 7_4:+59001114 | None:intergenic |
| ATTGAGTGCATATGTAAAGC+GGG | 0.520028 | 7_4:-59002343 | Msa1166840:CDS |
| TCCTTAAGCTTCATCTCCAC+AGG | 0.521980 | 7_4:+59002763 | None:intergenic |
| ATAATATTGTTAGGAAGAGA+GGG | 0.523338 | 7_4:-59002936 | Msa1166840:CDS |
| TTATCTTTGTGCCCAGTGGT+TGG | 0.523418 | 7_4:-59002315 | Msa1166840:CDS |
| TAAGACTGTCTATAGAAGCT+TGG | 0.524028 | 7_4:+59003655 | None:intergenic |
| TCTTTGTGCCCAGTGGTTGG+TGG | 0.525495 | 7_4:-59002312 | Msa1166840:CDS |
| ACCTCTGCACCATCAGGGCT+AGG | 0.527425 | 7_4:+59002439 | None:intergenic |
| GAACTTGAAAGCTCCCACTC+TGG | 0.530094 | 7_4:+59001026 | None:intergenic |
| TAAGTTTAAGAATGCTATTG+AGG | 0.530123 | 7_4:-59001145 | Msa1166840:CDS |
| TTATGGCAATTGATTCCTCC+AGG | 0.530459 | 7_4:+59002275 | None:intergenic |
| GTGGCATTTGGTGATCAACC+TGG | 0.533188 | 7_4:-59002293 | Msa1166840:CDS |
| TGAAATGAAAGGTGAATGGT+TGG | 0.544161 | 7_4:-59002965 | Msa1166840:CDS |
| GGTGTTCATCCTAGCCCTGA+TGG | 0.546334 | 7_4:-59002448 | Msa1166840:CDS |
| GACTCCCGATATCAAACAAA+GGG | 0.547436 | 7_4:+59003058 | None:intergenic |
| CCTCCCGATGTTATTCCGCC+CGG | 0.551681 | 7_4:-59002469 | Msa1166840:CDS |
| TCCATCAACTCCAGAGACAC+TGG | 0.557132 | 7_4:-59003297 | Msa1166840:CDS |
| GGTTTCAGTATAATGGGTCA+TGG | 0.560008 | 7_4:-59003110 | Msa1166840:CDS |
| ACCAAATGCCACCAACCACT+GGG | 0.564265 | 7_4:+59002304 | None:intergenic |
| CTTCTTCAACGAGAGATGAG+TGG | 0.567416 | 7_4:+59003421 | None:intergenic |
| GATTATTTGGTTAAGTTGTG+TGG | 0.571733 | 7_4:-59002811 | Msa1166840:CDS |
| TTGATAATTGGGATGCATTG+AGG | 0.572075 | 7_4:-59002846 | Msa1166840:CDS |
| GAAAGGTGAATGGTTGGAGA+GGG | 0.572473 | 7_4:-59002959 | Msa1166840:CDS |
| GAAAACATTGAAGCAATCAA+AGG | 0.576683 | 7_4:+59000830 | None:intergenic |
| TCACTAGCTAAGAAATGGCT+GGG | 0.581051 | 7_4:-59000809 | Msa1166840:three_prime_UTR |
| ATAAGCCGGTGTTGTTGGAA+GGG | 0.582277 | 7_4:-59002873 | Msa1166840:CDS |
| CCAACACAAGATTCCTCCAA+AGG | 0.589735 | 7_4:+59003148 | None:intergenic |
| ATCTTGAAATGAAAGGTGAA+TGG | 0.590130 | 7_4:-59002969 | Msa1166840:CDS |
| ACACCGGGCGGAATAACATC+GGG | 0.595142 | 7_4:+59002466 | None:intergenic |
| ATCAGGGCTAGGATGAACAC+CGG | 0.595347 | 7_4:+59002450 | None:intergenic |
| AAGAACAAGCTCATCAGTGA+GGG | 0.597323 | 7_4:+59003257 | None:intergenic |
| GCCCAAGGGCTGAACACCGT+GGG | 0.602240 | 7_4:+59003341 | None:intergenic |
| TCCTAGCCCTGATGGTGCAG+AGG | 0.603932 | 7_4:-59002440 | Msa1166840:CDS |
| GAGGTTATCTTTGTGCCCAG+TGG | 0.605601 | 7_4:-59002319 | Msa1166840:CDS |
| GGATTATTATTGGACCAGCT+GGG | 0.609112 | 7_4:-59002576 | Msa1166840:CDS |
| AACACCGGGCGGAATAACAT+CGG | 0.610276 | 7_4:+59002465 | None:intergenic |
| TTTAGATGGTAATAGTTTAG+GGG | 0.614858 | 7_4:-59003220 | Msa1166840:CDS |
| TGTGCTAATCTTGAAATGAA+AGG | 0.615147 | 7_4:-59002976 | Msa1166840:CDS |
| ATGAGAGGCCTGATTATAGG+TGG | 0.615319 | 7_4:-59002597 | Msa1166840:CDS |
| CTTGGAATGCTGTGATCAAG+GGG | 0.619460 | 7_4:-59002513 | Msa1166840:CDS |
| AAAGACGATCCAGACCCAGC+TGG | 0.622160 | 7_4:+59002562 | None:intergenic |
| TCTGCCCCGTCACACACCCA+CGG | 0.625768 | 7_4:-59003357 | Msa1166840:CDS |
| AACACCGTGGGTGTGTGACG+GGG | 0.625830 | 7_4:+59003353 | None:intergenic |
| TTTGGATCAAACAGATACAA+CGG | 0.630505 | 7_4:+59002703 | None:intergenic |
| TCTGTTGCAGACACCAGAGT+GGG | 0.640693 | 7_4:-59001039 | Msa1166840:CDS |
| ATGCTACCTCTGCACCATCA+GGG | 0.644492 | 7_4:+59002434 | None:intergenic |
| TTGAGTGCATATGTAAAGCG+GGG | 0.644930 | 7_4:-59002342 | Msa1166840:CDS |
| GTATGGTGGCTGGACTCTGG+AGG | 0.647859 | 7_4:+59003611 | None:intergenic |
| AATTGAGTGCATATGTAAAG+CGG | 0.648535 | 7_4:-59002344 | Msa1166840:CDS |
| CGACTCCCGATATCAAACAA+AGG | 0.652833 | 7_4:+59003057 | None:intergenic |
| GAGGCCGAACGCAAGCACAC+TGG | 0.652835 | 7_4:-59001202 | Msa1166840:CDS |
| GTCTGCAACAGAATCCCAGA+AGG | 0.653217 | 7_4:+59001050 | None:intergenic |
| CAAGAACAAGCTCATCAGTG+AGG | 0.659400 | 7_4:+59003256 | None:intergenic |
| TTGAAATAGAGATTGCCCAA+GGG | 0.664210 | 7_4:+59003327 | None:intergenic |
| AAATCCTCCCGAAAATACAC+CGG | 0.666892 | 7_4:+59002637 | None:intergenic |
| TCAGGGCTAGGATGAACACC+GGG | 0.669209 | 7_4:+59002451 | None:intergenic |
| ATACACCCTTCCAACAACAC+CGG | 0.670300 | 7_4:+59002868 | None:intergenic |
| TGCCCAAGGGCTGAACACCG+TGG | 0.670914 | 7_4:+59003340 | None:intergenic |
| ATTGAAATAGAGATTGCCCA+AGG | 0.684435 | 7_4:+59003326 | None:intergenic |
| TTCTGTTGCAGACACCAGAG+TGG | 0.688725 | 7_4:-59001040 | Msa1166840:CDS |
| GTACCCATTAGAAACAACAA+AGG | 0.698809 | 7_4:+59003080 | None:intergenic |
| AACACAAGATTCCTCCAAAG+GGG | 0.706242 | 7_4:+59003150 | None:intergenic |
| TGAGTGCATATGTAAAGCGG+GGG | 0.706771 | 7_4:-59002341 | Msa1166840:CDS |
| GCATTTGGTGATCAACCTGG+AGG | 0.725951 | 7_4:-59002290 | Msa1166840:CDS |
| GGGCTAGGATGAACACCGGG+CGG | 0.735361 | 7_4:+59002454 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATATTTGAAAATTTAAT+CGG | - | chr7_4:59002418-59002437 | Msa1166840:CDS | 10.0% |
| !! | TATTCATTTCAAAATATAAA+GGG | + | chr7_4:59002557-59002576 | None:intergenic | 10.0% |
| !!! | TTATTATTTTTTATTTCATG+TGG | - | chr7_4:59003069-59003088 | Msa1166840:CDS | 10.0% |
| !! | GTATTCATTTCAAAATATAA+AGG | + | chr7_4:59002558-59002577 | None:intergenic | 15.0% |
| !! | AAATCAATTTCAATCAAAAA+AGG | + | chr7_4:59003687-59003706 | None:intergenic | 15.0% |
| !!! | TTTTTGATTGAAATTGATTT+TGG | - | chr7_4:59003687-59003706 | Msa1166840:five_prime_UTR | 15.0% |
| !!! | GAAATACTACTTTAGTTTTT+TGG | + | chr7_4:59000730-59000749 | None:intergenic | 20.0% |
| !!! | TTTTTAGTAATGGAAGAAAT+GGG | + | chr7_4:59000963-59000982 | None:intergenic | 20.0% |
| !!! | TTTTTAGATGGTAATAGTTT+AGG | - | chr7_4:59001182-59001201 | Msa1166840:CDS | 20.0% |
| !!! | TTTTAGATGGTAATAGTTTA+GGG | - | chr7_4:59001183-59001202 | Msa1166840:CDS | 20.0% |
| !!! | TAAAGTTAGAGACTTTTATT+CGG | - | chr7_4:59001382-59001401 | Msa1166840:intron | 20.0% |
| !!! | CTTAGTACTTTTAGATTAAT+AGG | - | chr7_4:59002185-59002204 | Msa1166840:intron | 20.0% |
| !!! | GTCATTTTTTACATGTTAAT+AGG | - | chr7_4:59002309-59002328 | Msa1166840:CDS | 20.0% |
| !!! | GAATGTTCATTGTTTTAATT+CGG | - | chr7_4:59002339-59002358 | Msa1166840:CDS | 20.0% |
| !!! | TATATTTTGAAATGAATACG+AGG | - | chr7_4:59002559-59002578 | Msa1166840:CDS | 20.0% |
| !!! | ATATTTTGAAATGAATACGA+GGG | - | chr7_4:59002560-59002579 | Msa1166840:CDS | 20.0% |
| !!! | TTGCTATTTTGAATACTTAT+TGG | - | chr7_4:59002998-59003017 | Msa1166840:CDS | 20.0% |
| !! | TATGTATGAATTTCTTTAGA+AGG | + | chr7_4:59003405-59003424 | None:intergenic | 20.0% |
| !!! | TCTTTGTTCTTGTTTTGATA+CGG | + | chr7_4:59000884-59000903 | None:intergenic | 25.0% |
| !!! | GTTTTTGTTTCGGTTTTTTT+TGG | + | chr7_4:59000916-59000935 | None:intergenic | 25.0% |
| !!! | TTTTAGTAATGGAAGAAATG+GGG | + | chr7_4:59000962-59000981 | None:intergenic | 25.0% |
| !!! | GTTTTTAGTAATGGAAGAAA+TGG | + | chr7_4:59000964-59000983 | None:intergenic | 25.0% |
| ! | TTTAGATGGTAATAGTTTAG+GGG | - | chr7_4:59001184-59001203 | Msa1166840:CDS | 25.0% |
| ! | ATAATATTGTTAGGAAGAGA+GGG | - | chr7_4:59001468-59001487 | Msa1166840:intron | 25.0% |
| ! | ATAATAATCCACCTATAATC+AGG | + | chr7_4:59001818-59001837 | None:intergenic | 25.0% |
| !!! | GATTATAGGTGGATTATTAT+TGG | - | chr7_4:59001818-59001837 | Msa1166840:intron | 25.0% |
| ! | AACCATTCAATTATTGAAAC+AGG | + | chr7_4:59001998-59002017 | None:intergenic | 25.0% |
| ! | AAAAAAGGACACATAAAATC+AGG | + | chr7_4:59002276-59002295 | None:intergenic | 25.0% |
| ! | ACTACTTAACAGACAAAAAA+AGG | + | chr7_4:59002291-59002310 | None:intergenic | 25.0% |
| !! | ATTTTCAAATATGTAGTCCA+AGG | + | chr7_4:59002413-59002432 | None:intergenic | 25.0% |
| ! | GGAGTCATTATAATTAGAAA+TGG | - | chr7_4:59002439-59002458 | Msa1166840:CDS | 25.0% |
| ! | AAAGAAAAAAACTTTCCATC+AGG | + | chr7_4:59002711-59002730 | None:intergenic | 25.0% |
| !!! | CTTTTGGTTTTGTATTTTGT+TGG | - | chr7_4:59003100-59003119 | Msa1166840:CDS | 25.0% |
| ! | TAAGTTTAAGAATGCTATTG+AGG | - | chr7_4:59003259-59003278 | Msa1166840:CDS | 25.0% |
| !! | CTTTTTCTCTTCTTCTTTTT+GGG | + | chr7_4:59003315-59003334 | None:intergenic | 25.0% |
| !! | TCTTTTTCTCTTCTTCTTTT+TGG | + | chr7_4:59003316-59003335 | None:intergenic | 25.0% |
| !!! | TGTTGTACTCTATTTTTTAG+AGG | - | chr7_4:59003504-59003523 | Msa1166840:CDS | 25.0% |
| !!! | CTTTGTTCTTGTTTTGATAC+GGG | + | chr7_4:59000883-59000902 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTTGAGTTTGTGA+GGG | + | chr7_4:59000938-59000957 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTTTGAGTTTGTG+AGG | + | chr7_4:59000939-59000958 | None:intergenic | 30.0% |
| !!! | AGATGAGTGGTTTTTAGTAA+TGG | + | chr7_4:59000973-59000992 | None:intergenic | 30.0% |
| TTTGATGTCGAAACATTCTT+CGG | + | chr7_4:59001024-59001043 | None:intergenic | 30.0% | |
| ! | AGCTTGTTCTTGATATTCTA+GGG | - | chr7_4:59001159-59001178 | Msa1166840:CDS | 30.0% |
| !!! | GATATTCTAGGGTTTTTAGA+TGG | - | chr7_4:59001170-59001189 | Msa1166840:CDS | 30.0% |
| ! | TGTTGGAGAATTTTGTTGAT+GGG | - | chr7_4:59001273-59001292 | Msa1166840:intron | 30.0% |
| !! | TTGATGGGTTTCAGTATAAT+GGG | - | chr7_4:59001288-59001307 | Msa1166840:intron | 30.0% |
| !! | TCTACCTTTGTTGTTTCTAA+TGG | - | chr7_4:59001320-59001339 | Msa1166840:intron | 30.0% |
| !! | CTACCTTTGTTGTTTCTAAT+GGG | - | chr7_4:59001321-59001340 | Msa1166840:intron | 30.0% |
| TGTGCTAATCTTGAAATGAA+AGG | - | chr7_4:59001428-59001447 | Msa1166840:intron | 30.0% | |
| ATCTTGAAATGAAAGGTGAA+TGG | - | chr7_4:59001435-59001454 | Msa1166840:intron | 30.0% | |
| GATAATATTGTTAGGAAGAG+AGG | - | chr7_4:59001467-59001486 | Msa1166840:intron | 30.0% | |
| GAATTGGGATAGAGATTATT+TGG | - | chr7_4:59001580-59001599 | Msa1166840:intron | 30.0% | |
| ! | GATTATTTGGTTAAGTTGTG+TGG | - | chr7_4:59001593-59001612 | Msa1166840:intron | 30.0% |
| !! | TGGTGATGATGTTAAGTTTT+CGG | - | chr7_4:59001613-59001632 | Msa1166840:intron | 30.0% |
| ! | ATGATGTTAAGTTTTCGGTT+GGG | - | chr7_4:59001618-59001637 | Msa1166840:intron | 30.0% |
| ! | ATGAAGCTTAAGGACTATTT+TGG | - | chr7_4:59001650-59001669 | Msa1166840:intron | 30.0% |
| TTTGGATCAAACAGATACAA+CGG | + | chr7_4:59001704-59001723 | None:intergenic | 30.0% | |
| !!! | GGAACTTTTTCAGCAAATTT+TGG | + | chr7_4:59001722-59001741 | None:intergenic | 30.0% |
| TCATATTCCAAACCCAATTT+CGG | + | chr7_4:59001743-59001762 | None:intergenic | 30.0% | |
| CTCCTGTTTCAATAATTGAA+TGG | - | chr7_4:59001993-59002012 | Msa1166840:intron | 30.0% | |
| ! | GAATGGTTCATGAACTTTTA+TGG | - | chr7_4:59002010-59002029 | Msa1166840:intron | 30.0% |
| TTTATGGTGCAACAAAGAAT+TGG | - | chr7_4:59002026-59002045 | Msa1166840:intron | 30.0% | |
| AATTGAGTGCATATGTAAAG+CGG | - | chr7_4:59002060-59002079 | Msa1166840:intron | 30.0% | |
| AATTAGAAATGGTCAGTACA+TGG | - | chr7_4:59002450-59002469 | Msa1166840:CDS | 30.0% | |
| !! | TTGTTGATTCACAATAGCAT+GGG | - | chr7_4:59002481-59002500 | Msa1166840:CDS | 30.0% |
| TTTCTCATTTAGTGCATGTT+TGG | - | chr7_4:59002756-59002775 | Msa1166840:CDS | 30.0% | |
| ATTTGGATTGACAGTGAATT+CGG | + | chr7_4:59002879-59002898 | None:intergenic | 30.0% | |
| ACTGTCAATCCAAATATGAT+CGG | - | chr7_4:59002884-59002903 | Msa1166840:CDS | 30.0% | |
| AATCATTAGCCGATCATATT+TGG | + | chr7_4:59002896-59002915 | None:intergenic | 30.0% | |
| TGAATACTTATTGGAATCCA+TGG | - | chr7_4:59003007-59003026 | Msa1166840:CDS | 30.0% | |
| ! | TCATGTGGTTTGAATTCTTT+TGG | - | chr7_4:59003084-59003103 | Msa1166840:CDS | 30.0% |
| !! | GAGAAATTTGTTAAGTGTCT+TGG | - | chr7_4:59003169-59003188 | Msa1166840:CDS | 30.0% |
| AAGTTACTGATCCAAATTTG+CGG | - | chr7_4:59003438-59003457 | Msa1166840:CDS | 30.0% | |
| GAAAACATTGAAGCAATCAA+AGG | + | chr7_4:59003577-59003596 | None:intergenic | 30.0% | |
| ! | TGTTTTCACTAGCTAAGAAA+TGG | - | chr7_4:59003590-59003609 | Msa1166840:five_prime_UTR | 30.0% |
| TAAGACTGTCTATAGAAGCT+TGG | + | chr7_4:59000752-59000771 | None:intergenic | 35.0% | |
| !! | TGTAATCAGATTGCTGACTT+TGG | + | chr7_4:59000823-59000842 | None:intergenic | 35.0% |
| !! | GTTTGTGAGGGTTTTTGTTT+CGG | + | chr7_4:59000926-59000945 | None:intergenic | 35.0% |
| ! | TAATGGAAGAAATGGGGTTT+TGG | + | chr7_4:59000956-59000975 | None:intergenic | 35.0% |
| TTGAAATAGAGATTGCCCAA+GGG | + | chr7_4:59001080-59001099 | None:intergenic | 35.0% | |
| ATTGAAATAGAGATTGCCCA+AGG | + | chr7_4:59001081-59001100 | None:intergenic | 35.0% | |
| GGCAATCTCTATTTCAATTC+AGG | - | chr7_4:59001083-59001102 | Msa1166840:CDS | 35.0% | |
| ! | GAGCTTGTTCTTGATATTCT+AGG | - | chr7_4:59001158-59001177 | Msa1166840:CDS | 35.0% |
| ! | TGGTAATAGTTTAGGGGTTT+TGG | - | chr7_4:59001190-59001209 | Msa1166840:CDS | 35.0% |
| ! | GTGTTGGAGAATTTTGTTGA+TGG | - | chr7_4:59001272-59001291 | Msa1166840:intron | 35.0% |
| !! | GTTGATGGGTTTCAGTATAA+TGG | - | chr7_4:59001287-59001306 | Msa1166840:intron | 35.0% |
| GTACCCATTAGAAACAACAA+AGG | + | chr7_4:59001327-59001346 | None:intergenic | 35.0% | |
| !!! | CGGATTATCTTTTTCAGAGT+TGG | - | chr7_4:59001402-59001421 | Msa1166840:intron | 35.0% |
| TGAAATGAAAGGTGAATGGT+TGG | - | chr7_4:59001439-59001458 | Msa1166840:intron | 35.0% | |
| TGGAGAGGGATAATATTGTT+AGG | - | chr7_4:59001459-59001478 | Msa1166840:intron | 35.0% | |
| !! | TTTTGAGGAGGTTAATAAGC+CGG | - | chr7_4:59001517-59001536 | Msa1166840:intron | 35.0% |
| ! | TGGAAGGGTGTATTGATAAT+TGG | - | chr7_4:59001546-59001565 | Msa1166840:intron | 35.0% |
| ! | GGAAGGGTGTATTGATAATT+GGG | - | chr7_4:59001547-59001566 | Msa1166840:intron | 35.0% |
| ! | TTGATAATTGGGATGCATTG+AGG | - | chr7_4:59001558-59001577 | Msa1166840:intron | 35.0% |
| ! | GATGATGTTAAGTTTTCGGT+TGG | - | chr7_4:59001617-59001636 | Msa1166840:intron | 35.0% |
| CAGATCAAGTTAGAGAAGAA+AGG | - | chr7_4:59001678-59001697 | Msa1166840:intron | 35.0% | |
| TGCTGAAAAAGTTCCGAAAT+TGG | - | chr7_4:59001727-59001746 | Msa1166840:intron | 35.0% | |
| GCTGAAAAAGTTCCGAAATT+GGG | - | chr7_4:59001728-59001747 | Msa1166840:intron | 35.0% | |
| AAAAGTTCCGAAATTGGGTT+TGG | - | chr7_4:59001733-59001752 | Msa1166840:intron | 35.0% | |
| ! | ATGAAGTTCCGGTGTATTTT+CGG | - | chr7_4:59001759-59001778 | Msa1166840:intron | 35.0% |
| !! | TATTTTCGGGAGGATTTGTT+TGG | - | chr7_4:59001773-59001792 | Msa1166840:intron | 35.0% |
| !!! | GAGGATTTGTTTGGTGTTTT+GGG | - | chr7_4:59001782-59001801 | Msa1166840:intron | 35.0% |
| ATCCAAATTCAACTTCAGCT+TGG | - | chr7_4:59001873-59001892 | Msa1166840:intron | 35.0% | |
| TTCCAAGCTGAAGTTGAATT+TGG | + | chr7_4:59001878-59001897 | None:intergenic | 35.0% | |
| GCTTTACATATGCACTCAAT+TGG | + | chr7_4:59002061-59002080 | None:intergenic | 35.0% | |
| ATTGAGTGCATATGTAAAGC+GGG | - | chr7_4:59002061-59002080 | Msa1166840:intron | 35.0% | |
| !!! | GCTAACGTAGTTTTGTGTTA+TGG | + | chr7_4:59002149-59002168 | None:intergenic | 35.0% |
| TAACACAAAACTACGTTAGC+AGG | - | chr7_4:59002149-59002168 | Msa1166840:intron | 35.0% | |
| !! | CTTGTTGATTCACAATAGCA+TGG | - | chr7_4:59002480-59002499 | Msa1166840:CDS | 35.0% |
| GAAATTCATTGAAGCTGCAA+TGG | + | chr7_4:59002535-59002554 | None:intergenic | 35.0% | |
| !!! | TTTTGAAATGAATACGAGGG+AGG | - | chr7_4:59002563-59002582 | Msa1166840:CDS | 35.0% |
| GTTTAGTGACCTTGAGATAT+TGG | - | chr7_4:59002640-59002659 | Msa1166840:CDS | 35.0% | |
| GATTATGTGATTCCTAGAAG+GGG | + | chr7_4:59002689-59002708 | None:intergenic | 35.0% | |
| GGATTATGTGATTCCTAGAA+GGG | + | chr7_4:59002690-59002709 | None:intergenic | 35.0% | |
| AGGATTATGTGATTCCTAGA+AGG | + | chr7_4:59002691-59002710 | None:intergenic | 35.0% | |
| TAGGAATCACATAATCCTGA+TGG | - | chr7_4:59002693-59002712 | Msa1166840:CDS | 35.0% | |
| ! | TTTTAGCAAAAGCTGCACTT+TGG | + | chr7_4:59002834-59002853 | None:intergenic | 35.0% |
| ATCGTATCACATGTGCTTAT+CGG | + | chr7_4:59002946-59002965 | None:intergenic | 35.0% | |
| ACTTATTGGAATCCATGGAA+CGG | - | chr7_4:59003012-59003031 | Msa1166840:CDS | 35.0% | |
| ACTTTAACCTCAAACGTTAG+CGG | - | chr7_4:59003134-59003153 | Msa1166840:CDS | 35.0% | |
| AAGAGAAAAAGATCCAGCAA+AGG | - | chr7_4:59003324-59003343 | Msa1166840:CDS | 35.0% | |
| TCTATAATCAGCCGCAAATT+TGG | + | chr7_4:59003452-59003471 | None:intergenic | 35.0% | |
| CAGAAATCCAATTGCATATG+TGG | - | chr7_4:59003533-59003552 | Msa1166840:CDS | 35.0% | |
| CAAAGGAACACTAGACTTTA+GGG | + | chr7_4:59003560-59003579 | None:intergenic | 35.0% | |
| TCAAAGGAACACTAGACTTT+AGG | + | chr7_4:59003561-59003580 | None:intergenic | 35.0% | |
| !! | TTGCTGACTTTGGTTTGGTA+TGG | + | chr7_4:59000813-59000832 | None:intergenic | 40.0% |
| !! | TCAGATTGCTGACTTTGGTT+TGG | + | chr7_4:59000818-59000837 | None:intergenic | 40.0% |
| ATTACCTAAACCAGTGTCTC+TGG | + | chr7_4:59001120-59001139 | None:intergenic | 40.0% | |
| AAGAACAAGCTCATCAGTGA+GGG | + | chr7_4:59001150-59001169 | None:intergenic | 40.0% | |
| TCACTAATCATGAACCCCTT+TGG | - | chr7_4:59001240-59001259 | Msa1166840:intron | 40.0% | |
| AACACAAGATTCCTCCAAAG+GGG | + | chr7_4:59001257-59001276 | None:intergenic | 40.0% | |
| CAACACAAGATTCCTCCAAA+GGG | + | chr7_4:59001258-59001277 | None:intergenic | 40.0% | |
| !! | GGTTTCAGTATAATGGGTCA+TGG | - | chr7_4:59001294-59001313 | Msa1166840:intron | 40.0% |
| ! | GGGTACCCTTTGTTTGATAT+CGG | - | chr7_4:59001341-59001360 | Msa1166840:intron | 40.0% |
| ! | GGTACCCTTTGTTTGATATC+GGG | - | chr7_4:59001342-59001361 | Msa1166840:intron | 40.0% |
| GACTCCCGATATCAAACAAA+GGG | + | chr7_4:59001349-59001368 | None:intergenic | 40.0% | |
| TGTTAGGAAGAGAGGGATTT+CGG | - | chr7_4:59001475-59001494 | Msa1166840:intron | 40.0% | |
| ATTGGGATGCATTGAGGAAT+TGG | - | chr7_4:59001564-59001583 | Msa1166840:intron | 40.0% | |
| TTGGGATGCATTGAGGAATT+GGG | - | chr7_4:59001565-59001584 | Msa1166840:intron | 40.0% | |
| ! | GGGTTTGGAATATGAAGTTC+CGG | - | chr7_4:59001748-59001767 | Msa1166840:intron | 40.0% |
| ! | TGAAGTTCCGGTGTATTTTC+GGG | - | chr7_4:59001760-59001779 | Msa1166840:intron | 40.0% |
| AAATCCTCCCGAAAATACAC+CGG | + | chr7_4:59001770-59001789 | None:intergenic | 40.0% | |
| !!! | GGAGGATTTGTTTGGTGTTT+TGG | - | chr7_4:59001781-59001800 | Msa1166840:intron | 40.0% |
| !!! | TTGGTGTTTTGGGAAATGAG+AGG | - | chr7_4:59001792-59001811 | Msa1166840:intron | 40.0% |
| GAAATGAGAGGCCTGATTAT+AGG | - | chr7_4:59001804-59001823 | Msa1166840:intron | 40.0% | |
| TGGATTATTATTGGACCAGC+TGG | - | chr7_4:59001827-59001846 | Msa1166840:intron | 40.0% | |
| GGATTATTATTGGACCAGCT+GGG | - | chr7_4:59001828-59001847 | Msa1166840:intron | 40.0% | |
| TTGAGTGCATATGTAAAGCG+GGG | - | chr7_4:59002062-59002081 | Msa1166840:intron | 40.0% | |
| ! | TTATGGCAATTGATTCCTCC+AGG | + | chr7_4:59002132-59002151 | None:intergenic | 40.0% |
| TCGGATGTTAAAACATCCCT+TGG | - | chr7_4:59002358-59002377 | Msa1166840:CDS | 40.0% | |
| TATATGTATCCCTACTCCCT+AGG | - | chr7_4:59002592-59002611 | Msa1166840:CDS | 40.0% | |
| TCAGTGAGCTATTGTACCTA+GGG | + | chr7_4:59002611-59002630 | None:intergenic | 40.0% | |
| ATCAGTGAGCTATTGTACCT+AGG | + | chr7_4:59002612-59002631 | None:intergenic | 40.0% | |
| AATATAACGAGTCCGTTCCA+TGG | + | chr7_4:59003027-59003046 | None:intergenic | 40.0% | |
| GTGTCTTGGAGTTTCTTAAG+AGG | - | chr7_4:59003183-59003202 | Msa1166840:CDS | 40.0% | |
| AGAAGGAAAGTTTCCTTTGC+TGG | + | chr7_4:59003340-59003359 | None:intergenic | 40.0% | |
| AGCAAAGGAAACTTTCCTTC+TGG | - | chr7_4:59003339-59003358 | Msa1166840:CDS | 40.0% | |
| GCAAAGGAAACTTTCCTTCT+GGG | - | chr7_4:59003340-59003359 | Msa1166840:CDS | 40.0% | |
| TTAGGGTCCACATATGCAAT+TGG | + | chr7_4:59003543-59003562 | None:intergenic | 40.0% | |
| TTCACTAGCTAAGAAATGGC+TGG | - | chr7_4:59003594-59003613 | Msa1166840:five_prime_UTR | 40.0% | |
| TCACTAGCTAAGAAATGGCT+GGG | - | chr7_4:59003595-59003614 | Msa1166840:five_prime_UTR | 40.0% | |
| !! | CTGACTTTGGTTTGGTATGG+TGG | + | chr7_4:59000810-59000829 | None:intergenic | 45.0% |
| CTTCTTCAACGAGAGATGAG+TGG | + | chr7_4:59000986-59001005 | None:intergenic | 45.0% | |
| !! | AACTCCAGAGACACTGGTTT+AGG | - | chr7_4:59001113-59001132 | Msa1166840:CDS | 45.0% |
| CAAGAACAAGCTCATCAGTG+AGG | + | chr7_4:59001151-59001170 | None:intergenic | 45.0% | |
| CTAATCATGAACCCCTTTGG+AGG | - | chr7_4:59001243-59001262 | Msa1166840:intron | 45.0% | |
| CCAACACAAGATTCCTCCAA+AGG | + | chr7_4:59001259-59001278 | None:intergenic | 45.0% | |
| ! | CCTTTGGAGGAATCTTGTGT+TGG | - | chr7_4:59001256-59001275 | Msa1166840:intron | 45.0% |
| CGACTCCCGATATCAAACAA+AGG | + | chr7_4:59001350-59001369 | None:intergenic | 45.0% | |
| TGAAAGGTGAATGGTTGGAG+AGG | - | chr7_4:59001444-59001463 | Msa1166840:intron | 45.0% | |
| GAAAGGTGAATGGTTGGAGA+GGG | - | chr7_4:59001445-59001464 | Msa1166840:intron | 45.0% | |
| GATTTCGGTTGAGGAGTTTG+TGG | - | chr7_4:59001490-59001509 | Msa1166840:intron | 45.0% | |
| ! | GGAGTTTGTGGCGAATTTTG+AGG | - | chr7_4:59001502-59001521 | Msa1166840:intron | 45.0% |
| !! | GTTTGTGGCGAATTTTGAGG+AGG | - | chr7_4:59001505-59001524 | Msa1166840:intron | 45.0% |
| !! | GGTTAATAAGCCGGTGTTGT+TGG | - | chr7_4:59001526-59001545 | Msa1166840:intron | 45.0% |
| !! | AATAAGCCGGTGTTGTTGGA+AGG | - | chr7_4:59001530-59001549 | Msa1166840:intron | 45.0% |
| !! | ATAAGCCGGTGTTGTTGGAA+GGG | - | chr7_4:59001531-59001550 | Msa1166840:intron | 45.0% |
| ATACACCCTTCCAACAACAC+CGG | + | chr7_4:59001539-59001558 | None:intergenic | 45.0% | |
| TCCTTAAGCTTCATCTCCAC+AGG | + | chr7_4:59001644-59001663 | None:intergenic | 45.0% | |
| ATGAGAGGCCTGATTATAGG+TGG | - | chr7_4:59001807-59001826 | Msa1166840:intron | 45.0% | |
| AGCTTGGAATGCTGTGATCA+AGG | - | chr7_4:59001889-59001908 | Msa1166840:intron | 45.0% | |
| GCTTGGAATGCTGTGATCAA+GGG | - | chr7_4:59001890-59001909 | Msa1166840:intron | 45.0% | |
| CTTGGAATGCTGTGATCAAG+GGG | - | chr7_4:59001891-59001910 | Msa1166840:intron | 45.0% | |
| TGATCAAGGGGTCGAAGAAA+TGG | - | chr7_4:59001903-59001922 | Msa1166840:intron | 45.0% | |
| GATCAAGGGGTCGAAGAAAT+GGG | - | chr7_4:59001904-59001923 | Msa1166840:intron | 45.0% | |
| TGAGTGCATATGTAAAGCGG+GGG | - | chr7_4:59002063-59002082 | Msa1166840:intron | 45.0% | |
| TTATCTTTGTGCCCAGTGGT+TGG | - | chr7_4:59002089-59002108 | Msa1166840:intron | 45.0% | |
| TCCCTTGGCATCTCAAAATC+TGG | - | chr7_4:59002373-59002392 | Msa1166840:CDS | 45.0% | |
| !!! | GCCAGATTTTGAGATGCCAA+GGG | + | chr7_4:59002377-59002396 | None:intergenic | 45.0% |
| !!! | AGCCAGATTTTGAGATGCCA+AGG | + | chr7_4:59002378-59002397 | None:intergenic | 45.0% |
| !!! | TGGCTCTTTTAGAGTGTCCT+TGG | - | chr7_4:59002393-59002412 | Msa1166840:CDS | 45.0% |
| GCTATTGTACCTAGGGAGTA+GGG | + | chr7_4:59002604-59002623 | None:intergenic | 45.0% | |
| AGCTATTGTACCTAGGGAGT+AGG | + | chr7_4:59002605-59002624 | None:intergenic | 45.0% | |
| ! | ACAAGTACCGCTAACGTTTG+AGG | + | chr7_4:59003144-59003163 | None:intergenic | 45.0% |
| ! | ACGTTAGCGGTACTTGTTAC+AGG | - | chr7_4:59003147-59003166 | Msa1166840:CDS | 45.0% |
| ! | CACACTGGTATCTGGAACAA+AGG | - | chr7_4:59003217-59003236 | Msa1166840:CDS | 45.0% |
| ! | GCTATTGAGGCTTCTTTTCC+TGG | - | chr7_4:59003272-59003291 | Msa1166840:CDS | 45.0% |
| GTCAGTTCATCAATTGCTCC+AGG | + | chr7_4:59003293-59003312 | None:intergenic | 45.0% | |
| !! | CTTTGGTTTGGTATGGTGGC+TGG | + | chr7_4:59000806-59000825 | None:intergenic | 50.0% |
| TCCATCAACTCCAGAGACAC+TGG | - | chr7_4:59001107-59001126 | Msa1166840:CDS | 50.0% | |
| !! | ACCAGTGTCTCTGGAGTTGA+TGG | + | chr7_4:59001111-59001130 | None:intergenic | 50.0% |
| TTGATATCGGGAGTCGCGTT+CGG | - | chr7_4:59001354-59001373 | Msa1166840:intron | 50.0% | |
| GAAGAGAGGGATTTCGGTTG+AGG | - | chr7_4:59001481-59001500 | Msa1166840:intron | 50.0% | |
| ! | TAAGTTTTCGGTTGGGCCTG+TGG | - | chr7_4:59001625-59001644 | Msa1166840:intron | 50.0% |
| GCCTGTGGAGATGAAGCTTA+AGG | - | chr7_4:59001640-59001659 | Msa1166840:intron | 50.0% | |
| !! | AGTTCCGGTGTATTTTCGGG+AGG | - | chr7_4:59001763-59001782 | Msa1166840:intron | 50.0% |
| ATTATTGGACCAGCTGGGTC+TGG | - | chr7_4:59001833-59001852 | Msa1166840:intron | 50.0% | |
| AACACCGGGCGGAATAACAT+CGG | + | chr7_4:59001942-59001961 | None:intergenic | 50.0% | |
| ATCAGGGCTAGGATGAACAC+CGG | + | chr7_4:59001957-59001976 | None:intergenic | 50.0% | |
| ATGCTACCTCTGCACCATCA+GGG | + | chr7_4:59001973-59001992 | None:intergenic | 50.0% | |
| GAGGTTATCTTTGTGCCCAG+TGG | - | chr7_4:59002085-59002104 | Msa1166840:intron | 50.0% | |
| ACCAAATGCCACCAACCACT+GGG | + | chr7_4:59002103-59002122 | None:intergenic | 50.0% | |
| ! | GTGGCATTTGGTGATCAACC+TGG | - | chr7_4:59002111-59002130 | Msa1166840:intron | 50.0% |
| ! | GCATTTGGTGATCAACCTGG+AGG | - | chr7_4:59002114-59002133 | Msa1166840:intron | 50.0% |
| TCATTGAAGCTGCAATGGCG+TGG | + | chr7_4:59002530-59002549 | None:intergenic | 50.0% | |
| AGGTTCGCGCCAATATCTCA+AGG | + | chr7_4:59002652-59002671 | None:intergenic | 50.0% | |
| GTAGAATCAGTGTGTCGCAC+TGG | + | chr7_4:59002857-59002876 | None:intergenic | 50.0% | |
| GATACCAGTGTGCTTGCGTT+CGG | + | chr7_4:59003209-59003228 | None:intergenic | 50.0% | |
| AACGCAAGCACACTGGTATC+TGG | - | chr7_4:59003209-59003228 | Msa1166840:CDS | 50.0% | |
| GTCTGCAACAGAATCCCAGA+AGG | + | chr7_4:59003357-59003376 | None:intergenic | 50.0% | |
| TTCTGTTGCAGACACCAGAG+TGG | - | chr7_4:59003364-59003383 | Msa1166840:CDS | 50.0% | |
| TCTGTTGCAGACACCAGAGT+GGG | - | chr7_4:59003365-59003384 | Msa1166840:CDS | 50.0% | |
| GAACTTGAAAGCTCCCACTC+TGG | + | chr7_4:59003381-59003400 | None:intergenic | 50.0% | |
| TTGGTATGGTGGCTGGACTC+TGG | + | chr7_4:59000799-59000818 | None:intergenic | 55.0% | |
| TGAACACCGTGGGTGTGTGA+CGG | + | chr7_4:59001056-59001075 | None:intergenic | 55.0% | |
| AAAGACGATCCAGACCCAGC+TGG | + | chr7_4:59001845-59001864 | None:intergenic | 55.0% | |
| ACACCGGGCGGAATAACATC+GGG | + | chr7_4:59001941-59001960 | None:intergenic | 55.0% | |
| TCAGGGCTAGGATGAACACC+GGG | + | chr7_4:59001956-59001975 | None:intergenic | 55.0% | |
| GGTGTTCATCCTAGCCCTGA+TGG | - | chr7_4:59001956-59001975 | Msa1166840:intron | 55.0% | |
| GATGCTACCTCTGCACCATC+AGG | + | chr7_4:59001974-59001993 | None:intergenic | 55.0% | |
| GTGCATATGTAAAGCGGGGG+AGG | - | chr7_4:59002066-59002085 | Msa1166840:intron | 55.0% | |
| TCTTTGTGCCCAGTGGTTGG+TGG | - | chr7_4:59002092-59002111 | Msa1166840:intron | 55.0% | |
| CACCAAATGCCACCAACCAC+TGG | + | chr7_4:59002104-59002123 | None:intergenic | 55.0% | |
| GGCGCGAACCTTCACAAAGT+CGG | - | chr7_4:59002661-59002680 | Msa1166840:CDS | 55.0% | |
| AAGGGGCTCCGACTTTGTGA+AGG | + | chr7_4:59002672-59002691 | None:intergenic | 55.0% | |
| ACAAAGTCGGAGCCCCTTCT+AGG | - | chr7_4:59002674-59002693 | Msa1166840:CDS | 55.0% | |
| GTATGGTGGCTGGACTCTGG+AGG | + | chr7_4:59000796-59000815 | None:intergenic | 60.0% | |
| AACACCGTGGGTGTGTGACG+GGG | + | chr7_4:59001054-59001073 | None:intergenic | 60.0% | |
| GAACACCGTGGGTGTGTGAC+GGG | + | chr7_4:59001055-59001074 | None:intergenic | 60.0% | |
| ACCCACGGTGTTCAGCCCTT+GGG | - | chr7_4:59001062-59001081 | Msa1166840:CDS | 60.0% | |
| CCTCCCGATGTTATTCCGCC+CGG | - | chr7_4:59001935-59001954 | Msa1166840:intron | 60.0% | |
| ! | TCCTAGCCCTGATGGTGCAG+AGG | - | chr7_4:59001964-59001983 | Msa1166840:intron | 60.0% |
| ACCTCTGCACCATCAGGGCT+AGG | + | chr7_4:59001968-59001987 | None:intergenic | 60.0% | |
| !! | GCCCAGTGGTTGGTGGCATT+TGG | - | chr7_4:59002099-59002118 | Msa1166840:intron | 60.0% |
| TCTGCCCCGTCACACACCCA+CGG | - | chr7_4:59001047-59001066 | Msa1166840:CDS | 65.0% | |
| CACCCACGGTGTTCAGCCCT+TGG | - | chr7_4:59001061-59001080 | Msa1166840:CDS | 65.0% | |
| GCCCAAGGGCTGAACACCGT+GGG | + | chr7_4:59001066-59001085 | None:intergenic | 65.0% | |
| TGCCCAAGGGCTGAACACCG+TGG | + | chr7_4:59001067-59001086 | None:intergenic | 65.0% | |
| CCGGGCGGAATAACATCGGG+AGG | + | chr7_4:59001938-59001957 | None:intergenic | 65.0% | |
| GGGCTAGGATGAACACCGGG+CGG | + | chr7_4:59001953-59001972 | None:intergenic | 65.0% | |
| GAGGCCGAACGCAAGCACAC+TGG | - | chr7_4:59003202-59003221 | Msa1166840:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 59000706 | 59003720 | 59000706 | ID=Msa1166840;Name=Msa1166840 |
| chr7_4 | mRNA | 59000706 | 59003720 | 59000706 | ID=Msa1166840-mRNA-1;Parent=Msa1166840;Name=Msa1166840-mRNA-1;_AED=0.03;_eAED=0.03;_QI=143|1|1|1|1|1|2|311|520 |
| chr7_4 | exon | 59000706 | 59001257 | 59000706 | ID=Msa1166840-mRNA-1:exon:18254;Parent=Msa1166840-mRNA-1 |
| chr7_4 | exon | 59002256 | 59003720 | 59002256 | ID=Msa1166840-mRNA-1:exon:18253;Parent=Msa1166840-mRNA-1 |
| chr7_4 | five_prime_UTR | 59003578 | 59003720 | 59003578 | ID=Msa1166840-mRNA-1:five_prime_utr;Parent=Msa1166840-mRNA-1 |
| chr7_4 | CDS | 59002256 | 59003577 | 59002256 | ID=Msa1166840-mRNA-1:cds;Parent=Msa1166840-mRNA-1 |
| chr7_4 | CDS | 59001017 | 59001257 | 59001017 | ID=Msa1166840-mRNA-1:cds;Parent=Msa1166840-mRNA-1 |
| chr7_4 | three_prime_UTR | 59000706 | 59001016 | 59000706 | ID=Msa1166840-mRNA-1:three_prime_utr;Parent=Msa1166840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
