AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1167800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167800 MtrunA17_Chr7g0265291 100.000 205 0 0 4 208 2 206 8.32e-155 426
Msa1167800 MtrunA17_Chr1g0179781 78.818 203 40 2 4 205 2 202 2.28e-114 324
Msa1167800 MtrunA17_Chr5g0395181 55.769 208 83 4 1 208 13 211 1.58e-77 231
Msa1167800 MtrunA17_Chr5g0411151 57.767 206 69 5 9 205 35 231 1.54e-75 227
Msa1167800 MtrunA17_Chr4g0040071 55.392 204 75 6 9 205 15 209 5.59e-74 223
Msa1167800 MtrunA17_Chr8g0366581 58.333 204 71 5 9 205 33 229 2.78e-73 221
Msa1167800 MtrunA17_Chr2g0320521 39.496 238 96 10 6 204 3 231 4.69e-44 147
Msa1167800 MtrunA17_Chr4g0020811 50.345 145 60 6 3 138 1 142 7.66e-39 131
Msa1167800 MtrunA17_Chr2g0308401 49.296 142 61 5 6 138 1 140 8.87e-39 131
Msa1167800 MtrunA17_Chr2g0297251 35.242 227 112 5 9 205 37 258 2.15e-36 128
Msa1167800 MtrunA17_Chr2g0320561 47.651 149 67 4 6 145 1 147 3.61e-36 127
Msa1167800 MtrunA17_Chr2g0320551 47.183 142 64 4 6 138 1 140 2.25e-35 122
Msa1167800 MtrunA17_Chr7g0230511 42.754 138 74 3 7 144 7 139 9.40e-35 123
Msa1167800 MtrunA17_Chr4g0065041 42.647 136 74 1 9 144 8 139 3.52e-33 119
Msa1167800 MtrunA17_Chr8g0386511 33.333 159 93 4 50 204 4 153 4.76e-21 85.5
Msa1167800 MtrunA17_Chr8g0392151 34.615 156 76 6 11 145 15 165 3.97e-18 79.7
Msa1167800 MtrunA17_Chr4g0052451 43.902 82 40 1 63 138 10 91 1.02e-17 75.1
Msa1167800 MtrunA17_Chr5g0434331 27.184 206 114 6 1 204 35 206 6.17e-17 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167800 AT1G32700.1 55.941 202 78 5 9 205 12 207 2.28e-71 216
Msa1167800 AT4G17900.2 53.659 205 76 6 9 205 20 213 1.00e-67 207
Msa1167800 AT4G17900.1 53.659 205 76 6 9 205 34 227 1.05e-67 207
Msa1167800 AT2G27930.1 55.072 207 63 4 9 206 4 189 3.70e-67 204
Msa1167800 AT2G27930.4 55.072 207 63 4 9 206 4 189 3.70e-67 204
Msa1167800 AT1G76590.1 48.918 231 80 6 9 204 18 245 5.47e-67 206
Msa1167800 AT1G21000.2 47.934 242 83 10 2 204 6 243 1.42e-66 205
Msa1167800 AT1G21000.1 47.934 242 83 9 2 204 9 246 1.83e-66 205
Msa1167800 AT1G43000.2 45.536 224 94 7 1 204 8 223 1.27e-62 194
Msa1167800 AT1G43000.1 45.536 224 94 7 1 204 1 216 1.45e-62 194
Msa1167800 AT2G27930.3 66.187 139 36 2 9 138 4 140 1.93e-59 184
Msa1167800 AT2G27930.2 66.187 139 36 2 9 138 4 140 1.93e-59 184
Msa1167800 AT1G32700.2 56.322 174 65 5 37 205 1 168 2.83e-57 179
Msa1167800 AT5G46710.3 48.259 201 96 5 9 204 12 209 3.05e-55 175
Msa1167800 AT5G46710.1 48.259 201 96 5 9 204 28 225 6.15e-55 175
Msa1167800 AT5G46710.2 57.252 131 52 3 9 138 28 155 1.55e-46 151
Msa1167800 AT2G27930.5 52.318 151 44 3 65 206 61 192 9.15e-40 135
Msa1167800 AT2G27930.6 52.318 151 44 3 65 206 61 192 9.15e-40 135
Msa1167800 AT3G60670.1 37.634 186 99 5 9 181 7 188 1.64e-33 120
Msa1167800 AT1G31040.1 34.348 230 111 7 9 204 19 242 3.14e-33 119
Msa1167800 AT2G12646.3 43.796 137 73 2 7 143 1 133 8.95e-33 119
Msa1167800 AT2G12646.1 44.444 135 71 2 9 143 6 136 1.24e-32 118
Msa1167800 AT2G12646.2 44.444 135 71 2 9 143 6 136 1.24e-32 118
Msa1167800 AT2G01818.1 31.905 210 126 4 11 204 13 221 6.41e-26 100
Msa1167800 AT2G01818.2 30.667 150 87 4 71 204 9 157 3.82e-12 62.4

Find 71 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTTCGGTTCTGTTCTT+TGG 0.140972 7_4:-60264805 Msa1167800:CDS
GCTACTCCTTTCCCAGATTT+TGG 0.169958 7_4:+60264864 None:intergenic
TTTCTTCTCCTTGCATTTAA+AGG 0.172328 7_4:+60263621 None:intergenic
GAATACAATACAACCCTATT+TGG 0.214365 7_4:-60263496 Msa1167800:three_prime_UTR
TACTATGCATTATTGATTCT+TGG 0.219611 7_4:+60263289 None:intergenic
ATTCCTTCTAAACTCAAAAT+TGG 0.257186 7_4:-60263549 Msa1167800:three_prime_UTR
GTCCAAGGTACTTCATGATT+TGG 0.286507 7_4:-60263394 Msa1167800:three_prime_UTR
TCATTTCGGTTCTGTTCTTT+GGG 0.297486 7_4:-60264804 Msa1167800:CDS
GAGTCTTGTTCTTGAATGTT+AGG 0.310918 7_4:-60264893 Msa1167800:CDS
TTTAATTATTATCTAATAGT+TGG 0.323891 7_4:-60263262 Msa1167800:three_prime_UTR
GTTAGGCCTCAACCAAAATC+TGG 0.351742 7_4:-60264876 Msa1167800:CDS
CAAAGACCATCAAGTCATTC+AGG 0.358735 7_4:-60265284 Msa1167800:intron
GAAGAAAAGGTATACCTCAT+AGG 0.379000 7_4:-60263605 Msa1167800:CDS
ATACCTCATAGGGCACCTTT+TGG 0.387290 7_4:-60263594 Msa1167800:CDS
TGCATACCTGAATGACTTGA+TGG 0.388408 7_4:+60265278 None:intergenic
TGGAGATGCAAGCTTTGCTT+TGG 0.396373 7_4:-60263754 Msa1167800:CDS
GGAGCTTGTTGGATTCATTT+CGG 0.401131 7_4:-60264818 Msa1167800:CDS
ACACAGTGTTGGTGCCTCCT+TGG 0.407393 7_4:-60265447 Msa1167800:CDS
GTTCTGTTCTTTGGGATGTA+AGG 0.410147 7_4:-60264796 Msa1167800:intron
CTCCTTGCATTTAAAGGAGG+TGG 0.416107 7_4:+60263627 None:intergenic
CAGAAAGTGTTGGACATTAG+TGG 0.416506 7_4:-60264945 Msa1167800:CDS
AAGTAAAGGAAAGGGTATAT+AGG 0.426584 7_4:-60263369 Msa1167800:three_prime_UTR
GGTTCCTCATTCTAATGGGA+TGG 0.428560 7_4:-60263573 Msa1167800:exon
ATGGGTCAAATGTTTGAAAC+AGG 0.429299 7_4:-60265470 None:intergenic
GGAGGTGGAGGAGGCGTGAG+AGG 0.445087 7_4:+60263642 None:intergenic
GTTCCTCATTCTAATGGGAT+GGG 0.451443 7_4:-60263572 Msa1167800:exon
GCTCACATTTGTGAGATTTG+TGG 0.456800 7_4:-60264843 Msa1167800:CDS
AGATGCAAGCTTTGCTTTGG+AGG 0.464996 7_4:-60263751 Msa1167800:CDS
GCTTTGGAGGGTAAGAATGA+AGG 0.469335 7_4:-60263738 Msa1167800:CDS
TTCATGATTTGGAAAAGTAA+AGG 0.486797 7_4:-60263383 Msa1167800:three_prime_UTR
TTAAATGCAAGGAGAAGAAA+AGG 0.487088 7_4:-60263618 Msa1167800:CDS
GGACAATGAAAACTATAAAA+CGG 0.488038 7_4:+60263181 None:intergenic
TTCAACAATGGTTCAAGCCA+AGG 0.490118 7_4:+60265430 None:intergenic
CATTATTGATTCTTGGACAA+GGG 0.492311 7_4:+60263296 None:intergenic
GCATTTAAAGGAGGTGGAGG+AGG 0.494494 7_4:+60263633 None:intergenic
CTTCTCCTTGCATTTAAAGG+AGG 0.503493 7_4:+60263624 None:intergenic
TACAATACAACCCTATTTGG+TGG 0.509396 7_4:-60263493 Msa1167800:three_prime_UTR
TTCCAAATCATGAAGTACCT+TGG 0.515905 7_4:+60263392 None:intergenic
AATGAAGGATTGACAATGGA+AGG 0.518953 7_4:-60263723 Msa1167800:CDS
AAGAAAAGGTATACCTCATA+GGG 0.519252 7_4:-60263604 Msa1167800:CDS
ACAATACAACCCTATTTGGT+GGG 0.523862 7_4:-60263492 Msa1167800:three_prime_UTR
GATGCAAGCTTTGCTTTGGA+GGG 0.525049 7_4:-60263750 Msa1167800:CDS
TAGGGTTGTATTGTATTCCA+AGG 0.525651 7_4:+60263501 None:intergenic
GATTTGTGGAAGGAGCTTGT+TGG 0.527361 7_4:-60264829 Msa1167800:CDS
AATTATTATCTAATAGTTGG+AGG 0.534181 7_4:-60263259 Msa1167800:three_prime_UTR
ATTTGGAAAAGTAAAGGAAA+GGG 0.542085 7_4:-60263377 Msa1167800:three_prime_UTR
AGATTAGGAGCCTTTGGAGG+GGG 0.542302 7_4:-60263421 Msa1167800:three_prime_UTR
CTCCACCTCCTTTAAATGCA+AGG 0.542768 7_4:-60263629 Msa1167800:CDS
AAAAGATTAGGAGCCTTTGG+AGG 0.548418 7_4:-60263424 Msa1167800:three_prime_UTR
CTTGCATTTAAAGGAGGTGG+AGG 0.548902 7_4:+60263630 None:intergenic
ATTATTATCTAATAGTTGGA+GGG 0.552005 7_4:-60263258 Msa1167800:three_prime_UTR
TTAGGCCTCAACCAAAATCT+GGG 0.556600 7_4:-60264875 Msa1167800:CDS
TATTGTTTAGATTGCAACAA+TGG 0.560088 7_4:-60265346 Msa1167800:CDS
CATTAGAATGAGGAACCAAA+AGG 0.564563 7_4:+60263579 None:intergenic
AAAGATTAGGAGCCTTTGGA+GGG 0.565639 7_4:-60263423 Msa1167800:three_prime_UTR
GAACCAAAAGGTGCCCTATG+AGG 0.572485 7_4:+60263591 None:intergenic
TAAGAATGAAGGATTGACAA+TGG 0.573703 7_4:-60263727 Msa1167800:CDS
GATTTGGAAAAGTAAAGGAA+AGG 0.586158 7_4:-60263378 Msa1167800:three_prime_UTR
AAAAGAATTATATAATGACT+AGG 0.588212 7_4:+60263464 None:intergenic
GTCAGAGATTCAGAAAGTGT+TGG 0.588527 7_4:-60264955 Msa1167800:CDS
AATCCCATCCCATTAGAATG+AGG 0.588730 7_4:+60263569 None:intergenic
AGGGTTGTATTGTATTCCAA+GGG 0.597466 7_4:+60263502 None:intergenic
CCTCAACCAAAATCTGGGAA+AGG 0.603599 7_4:-60264870 Msa1167800:CDS
GCATTATTGATTCTTGGACA+AGG 0.606448 7_4:+60263295 None:intergenic
TATTGATTCTTGGACAAGGG+AGG 0.608470 7_4:+60263299 None:intergenic
TTAGATTGCAACAATGGTGA+TGG 0.620304 7_4:-60265340 Msa1167800:CDS
ACATTTGTGAGATTTGTGGA+AGG 0.623549 7_4:-60264839 Msa1167800:CDS
AACAATGGTTCAAGCCAAGG+AGG 0.647379 7_4:+60265433 None:intergenic
TTTGAAACAGGACACAGTGT+TGG 0.663854 7_4:-60265458 Msa1167800:CDS
TCAGAAGAAGAATTGCGTGA+AGG 0.679765 7_4:-60263684 Msa1167800:CDS
AAGATTAGGAGCCTTTGGAG+GGG 0.685066 7_4:-60263422 Msa1167800:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATTCATATATGAAAT+GGG + chr7_4:60263467-60263486 None:intergenic 10.0%
!! TTAAATATTCATATATGAAA+TGG + chr7_4:60263468-60263487 None:intergenic 10.0%
!!! TATATGAATATTTAATTTTC+TGG - chr7_4:60263473-60263492 Msa1167800:three_prime_UTR 10.0%
!!! ATATGAATATTTAATTTTCT+GGG - chr7_4:60263474-60263493 Msa1167800:three_prime_UTR 10.0%
!!! TAATAATATTCTCTTTTTTA+CGG - chr7_4:60264182-60264201 Msa1167800:intron 10.0%
!! TTAAACTATATTTAGATAAA+GGG + chr7_4:60264529-60264548 None:intergenic 10.0%
!! ATTAAACTATATTTAGATAA+AGG + chr7_4:60264530-60264549 None:intergenic 10.0%
!!! AATTCTTTTTACAATAATAA+AGG - chr7_4:60265195-60265214 Msa1167800:intron 10.0%
!! TTTAATTATTATCTAATAGT+TGG - chr7_4:60265383-60265402 Msa1167800:CDS 10.0%
!! TAAATATTCATATATGAAAT+GGG + chr7_4:60263467-60263486 None:intergenic 10.0%
!! TTAAATATTCATATATGAAA+TGG + chr7_4:60263468-60263487 None:intergenic 10.0%
!!! TATATGAATATTTAATTTTC+TGG - chr7_4:60263473-60263492 Msa1167800:three_prime_UTR 10.0%
!!! ATATGAATATTTAATTTTCT+GGG - chr7_4:60263474-60263493 Msa1167800:three_prime_UTR 10.0%
!!! TAATAATATTCTCTTTTTTA+CGG - chr7_4:60264182-60264201 Msa1167800:intron 10.0%
!! TTAAACTATATTTAGATAAA+GGG + chr7_4:60264529-60264548 None:intergenic 10.0%
!! ATTAAACTATATTTAGATAA+AGG + chr7_4:60264530-60264549 None:intergenic 10.0%
!!! AATTCTTTTTACAATAATAA+AGG - chr7_4:60265195-60265214 Msa1167800:intron 10.0%
!! TTTAATTATTATCTAATAGT+TGG - chr7_4:60265383-60265402 Msa1167800:CDS 10.0%
!!! TTTTTTATTAATGTATTTGG+TGG - chr7_4:60263500-60263519 Msa1167800:three_prime_UTR 15.0%
!!! ATTATGAGTTTTTATAAACA+TGG - chr7_4:60264216-60264235 Msa1167800:intron 15.0%
!!! TTATGAGTTTTTATAAACAT+GGG - chr7_4:60264217-60264236 Msa1167800:intron 15.0%
!! TTTGTTTATCTATCATAATT+AGG - chr7_4:60264283-60264302 Msa1167800:intron 15.0%
!!! TGATAATGTACAAAATTTAT+TGG + chr7_4:60264373-60264392 None:intergenic 15.0%
!! GATAATATGTAATATTTGAT+TGG - chr7_4:60264463-60264482 Msa1167800:intron 15.0%
!! TAAACTATATTTAGATAAAG+GGG + chr7_4:60264528-60264547 None:intergenic 15.0%
!! AAAAGAATTATATAATGACT+AGG + chr7_4:60265184-60265203 None:intergenic 15.0%
!!! TTTTTTATTAATGTATTTGG+TGG - chr7_4:60263500-60263519 Msa1167800:three_prime_UTR 15.0%
!!! ATTATGAGTTTTTATAAACA+TGG - chr7_4:60264216-60264235 Msa1167800:intron 15.0%
!!! TTATGAGTTTTTATAAACAT+GGG - chr7_4:60264217-60264236 Msa1167800:intron 15.0%
!! TTTGTTTATCTATCATAATT+AGG - chr7_4:60264283-60264302 Msa1167800:intron 15.0%
!!! TGATAATGTACAAAATTTAT+TGG + chr7_4:60264373-60264392 None:intergenic 15.0%
!! GATAATATGTAATATTTGAT+TGG - chr7_4:60264463-60264482 Msa1167800:intron 15.0%
!! TAAACTATATTTAGATAAAG+GGG + chr7_4:60264528-60264547 None:intergenic 15.0%
!! AAAAGAATTATATAATGACT+AGG + chr7_4:60265184-60265203 None:intergenic 15.0%
!! TGATGTATAATGTAATGTAA+TGG - chr7_4:60263549-60263568 Msa1167800:three_prime_UTR 20.0%
!! ATAATTATGATGTTGAATGA+TGG + chr7_4:60264066-60264085 None:intergenic 20.0%
!!! TATGAGTTTTTATAAACATG+GGG - chr7_4:60264218-60264237 Msa1167800:intron 20.0%
!! AAAAAGAAAACTCAAAATGT+AGG + chr7_4:60264258-60264277 None:intergenic 20.0%
!!! TGAAAAATAATATGATGATG+TGG - chr7_4:60264441-60264460 Msa1167800:intron 20.0%
!! GTAAAAATGATTTACAAAGT+CGG - chr7_4:60264494-60264513 Msa1167800:intron 20.0%
!!! ATTTAATTTATATACCACGT+TGG + chr7_4:60264722-60264741 None:intergenic 20.0%
!! CTTGAAAGAATAAAGAAAAA+TGG - chr7_4:60264871-60264890 Msa1167800:CDS 20.0%
!! TAATAAAGGTGAAAAAGATT+AGG - chr7_4:60265209-60265228 Msa1167800:intron 20.0%
!! AATTATTATCTAATAGTTGG+AGG - chr7_4:60265386-60265405 Msa1167800:CDS 20.0%
!! ATTATTATCTAATAGTTGGA+GGG - chr7_4:60265387-60265406 Msa1167800:CDS 20.0%
!! TGATGTATAATGTAATGTAA+TGG - chr7_4:60263549-60263568 Msa1167800:three_prime_UTR 20.0%
!! ATAATTATGATGTTGAATGA+TGG + chr7_4:60264066-60264085 None:intergenic 20.0%
!!! TATGAGTTTTTATAAACATG+GGG - chr7_4:60264218-60264237 Msa1167800:intron 20.0%
!! AAAAAGAAAACTCAAAATGT+AGG + chr7_4:60264258-60264277 None:intergenic 20.0%
!!! TGAAAAATAATATGATGATG+TGG - chr7_4:60264441-60264460 Msa1167800:intron 20.0%
!! GTAAAAATGATTTACAAAGT+CGG - chr7_4:60264494-60264513 Msa1167800:intron 20.0%
!!! ATTTAATTTATATACCACGT+TGG + chr7_4:60264722-60264741 None:intergenic 20.0%
!! CTTGAAAGAATAAAGAAAAA+TGG - chr7_4:60264871-60264890 Msa1167800:CDS 20.0%
!! TAATAAAGGTGAAAAAGATT+AGG - chr7_4:60265209-60265228 Msa1167800:intron 20.0%
!! AATTATTATCTAATAGTTGG+AGG - chr7_4:60265386-60265405 Msa1167800:CDS 20.0%
!! ATTATTATCTAATAGTTGGA+GGG - chr7_4:60265387-60265406 Msa1167800:CDS 20.0%
! TATTGTTTAGATTGCAACAA+TGG - chr7_4:60263299-60263318 Msa1167800:three_prime_UTR 25.0%
! TTTCTTTATTGAAAACCCAA+CGG - chr7_4:60263406-60263425 Msa1167800:three_prime_UTR 25.0%
!! TATTAATGTATTTGGTGGAA+TGG - chr7_4:60263505-60263524 Msa1167800:three_prime_UTR 25.0%
!! ATTAATGTATTTGGTGGAAT+GGG - chr7_4:60263506-60263525 Msa1167800:three_prime_UTR 25.0%
! TGTATAATGTAATGTAATGG+TGG - chr7_4:60263552-60263571 Msa1167800:three_prime_UTR 25.0%
!!! GATTTGTTTGTTGTTTTTGT+TGG - chr7_4:60263624-60263643 Msa1167800:CDS 25.0%
! ACTCAATTATACTCATCATA+TGG - chr7_4:60263990-60264009 Msa1167800:intron 25.0%
! CTCAATTATACTCATCATAT+GGG - chr7_4:60263991-60264010 Msa1167800:intron 25.0%
! GCATGATGAATAATTAAAAG+CGG + chr7_4:60264096-60264115 None:intergenic 25.0%
! GGTAAATGTACTAATTATGA+AGG + chr7_4:60264118-60264137 None:intergenic 25.0%
! GTAATTAATCGAAATGTGAA+TGG + chr7_4:60264139-60264158 None:intergenic 25.0%
! TCTATCATAATTAGGACATT+TGG - chr7_4:60264291-60264310 Msa1167800:intron 25.0%
! GCATGTCATATACAAATAAT+TGG - chr7_4:60264791-60264810 Msa1167800:intron 25.0%
! ATTCCTTCTAAACTCAAAAT+TGG - chr7_4:60265096-60265115 Msa1167800:intron 25.0%
!!! CAATATTCAATTTTTTCCCT+TGG - chr7_4:60265127-60265146 Msa1167800:intron 25.0%
!! TTCATGATTTGGAAAAGTAA+AGG - chr7_4:60265262-60265281 Msa1167800:intron 25.0%
! ATTTGGAAAAGTAAAGGAAA+GGG - chr7_4:60265268-60265287 Msa1167800:intron 25.0%
!! AAAGAAAACTCCTTCTTTTT+CGG - chr7_4:60265299-60265318 Msa1167800:CDS 25.0%
!!! TACTATGCATTATTGATTCT+TGG + chr7_4:60265359-60265378 None:intergenic 25.0%
! AATTAAAAAGCAAGTCTTTG+TGG - chr7_4:60265438-60265457 Msa1167800:CDS 25.0%
! TATTGTTTAGATTGCAACAA+TGG - chr7_4:60263299-60263318 Msa1167800:three_prime_UTR 25.0%
! TTTCTTTATTGAAAACCCAA+CGG - chr7_4:60263406-60263425 Msa1167800:three_prime_UTR 25.0%
!! TATTAATGTATTTGGTGGAA+TGG - chr7_4:60263505-60263524 Msa1167800:three_prime_UTR 25.0%
!! ATTAATGTATTTGGTGGAAT+GGG - chr7_4:60263506-60263525 Msa1167800:three_prime_UTR 25.0%
! TGTATAATGTAATGTAATGG+TGG - chr7_4:60263552-60263571 Msa1167800:three_prime_UTR 25.0%
!!! GATTTGTTTGTTGTTTTTGT+TGG - chr7_4:60263624-60263643 Msa1167800:CDS 25.0%
! ACTCAATTATACTCATCATA+TGG - chr7_4:60263990-60264009 Msa1167800:intron 25.0%
! CTCAATTATACTCATCATAT+GGG - chr7_4:60263991-60264010 Msa1167800:intron 25.0%
! GCATGATGAATAATTAAAAG+CGG + chr7_4:60264096-60264115 None:intergenic 25.0%
! GGTAAATGTACTAATTATGA+AGG + chr7_4:60264118-60264137 None:intergenic 25.0%
! GTAATTAATCGAAATGTGAA+TGG + chr7_4:60264139-60264158 None:intergenic 25.0%
! TCTATCATAATTAGGACATT+TGG - chr7_4:60264291-60264310 Msa1167800:intron 25.0%
! GCATGTCATATACAAATAAT+TGG - chr7_4:60264791-60264810 Msa1167800:intron 25.0%
! ATTCCTTCTAAACTCAAAAT+TGG - chr7_4:60265096-60265115 Msa1167800:intron 25.0%
!!! CAATATTCAATTTTTTCCCT+TGG - chr7_4:60265127-60265146 Msa1167800:intron 25.0%
!! TTCATGATTTGGAAAAGTAA+AGG - chr7_4:60265262-60265281 Msa1167800:intron 25.0%
! ATTTGGAAAAGTAAAGGAAA+GGG - chr7_4:60265268-60265287 Msa1167800:intron 25.0%
!! AAAGAAAACTCCTTCTTTTT+CGG - chr7_4:60265299-60265318 Msa1167800:CDS 25.0%
!!! TACTATGCATTATTGATTCT+TGG + chr7_4:60265359-60265378 None:intergenic 25.0%
! AATTAAAAAGCAAGTCTTTG+TGG - chr7_4:60265438-60265457 Msa1167800:CDS 25.0%
! AAAAACGGTGTTTTCAACAA+TGG + chr7_4:60263230-60263249 None:intergenic 30.0%
ATCCGACAAATGTTGAAAAA+CGG + chr7_4:60263245-60263264 None:intergenic 30.0%
GCATTGCAGATTCAAAAAAT+GGG - chr7_4:60263439-60263458 Msa1167800:three_prime_UTR 30.0%
!! GTTGATAATGATATGGACAT+TGG + chr7_4:60263954-60263973 None:intergenic 30.0%
!! TGTGCATGTTGATAATGATA+TGG + chr7_4:60263961-60263980 None:intergenic 30.0%
! AAATGTAGGTGATGATGTAT+GGG + chr7_4:60264031-60264050 None:intergenic 30.0%
GATGAATAATTAAAAGCGGT+GGG + chr7_4:60264092-60264111 None:intergenic 30.0%
TGATGAATAATTAAAAGCGG+TGG + chr7_4:60264093-60264112 None:intergenic 30.0%
AAAATCACAATGCGTCAATT+AGG + chr7_4:60264320-60264339 None:intergenic 30.0%
CAGAAACTATGAGATTTGAT+TGG + chr7_4:60264397-60264416 None:intergenic 30.0%
!! TGGTGTAAAGGCTTTTAAAA+CGG + chr7_4:60264702-60264721 None:intergenic 30.0%
TAAGAATGAAGGATTGACAA+TGG - chr7_4:60264918-60264937 Msa1167800:CDS 30.0%
TTTCTTCTCCTTGCATTTAA+AGG + chr7_4:60265027-60265046 None:intergenic 30.0%
TTAAATGCAAGGAGAAGAAA+AGG - chr7_4:60265027-60265046 Msa1167800:intron 30.0%
! AAGAAAAGGTATACCTCATA+GGG - chr7_4:60265041-60265060 Msa1167800:intron 30.0%
!!! TTTTGGTTCCTCATTCTAAT+GGG - chr7_4:60265068-60265087 Msa1167800:intron 30.0%
!!! GTACCAATTTTGAGTTTAGA+AGG + chr7_4:60265102-60265121 None:intergenic 30.0%
GAATACAATACAACCCTATT+TGG - chr7_4:60265149-60265168 Msa1167800:intron 30.0%
GATTTGGAAAAGTAAAGGAA+AGG - chr7_4:60265267-60265286 Msa1167800:intron 30.0%
! AAGTAAAGGAAAGGGTATAT+AGG - chr7_4:60265276-60265295 Msa1167800:intron 30.0%
!!! GGGAGGATTTGTTTTTTTTA+GGG + chr7_4:60265332-60265351 None:intergenic 30.0%
!!! AGGGAGGATTTGTTTTTTTT+AGG + chr7_4:60265333-60265352 None:intergenic 30.0%
!! CATTATTGATTCTTGGACAA+GGG + chr7_4:60265352-60265371 None:intergenic 30.0%
! AAAAACGGTGTTTTCAACAA+TGG + chr7_4:60263230-60263249 None:intergenic 30.0%
ATCCGACAAATGTTGAAAAA+CGG + chr7_4:60263245-60263264 None:intergenic 30.0%
GCATTGCAGATTCAAAAAAT+GGG - chr7_4:60263439-60263458 Msa1167800:three_prime_UTR 30.0%
!! GTTGATAATGATATGGACAT+TGG + chr7_4:60263954-60263973 None:intergenic 30.0%
!! TGTGCATGTTGATAATGATA+TGG + chr7_4:60263961-60263980 None:intergenic 30.0%
! AAATGTAGGTGATGATGTAT+GGG + chr7_4:60264031-60264050 None:intergenic 30.0%
GATGAATAATTAAAAGCGGT+GGG + chr7_4:60264092-60264111 None:intergenic 30.0%
TGATGAATAATTAAAAGCGG+TGG + chr7_4:60264093-60264112 None:intergenic 30.0%
AAAATCACAATGCGTCAATT+AGG + chr7_4:60264320-60264339 None:intergenic 30.0%
CAGAAACTATGAGATTTGAT+TGG + chr7_4:60264397-60264416 None:intergenic 30.0%
!! TGGTGTAAAGGCTTTTAAAA+CGG + chr7_4:60264702-60264721 None:intergenic 30.0%
TAAGAATGAAGGATTGACAA+TGG - chr7_4:60264918-60264937 Msa1167800:CDS 30.0%
TTTCTTCTCCTTGCATTTAA+AGG + chr7_4:60265027-60265046 None:intergenic 30.0%
TTAAATGCAAGGAGAAGAAA+AGG - chr7_4:60265027-60265046 Msa1167800:intron 30.0%
! AAGAAAAGGTATACCTCATA+GGG - chr7_4:60265041-60265060 Msa1167800:intron 30.0%
!!! TTTTGGTTCCTCATTCTAAT+GGG - chr7_4:60265068-60265087 Msa1167800:intron 30.0%
!!! GTACCAATTTTGAGTTTAGA+AGG + chr7_4:60265102-60265121 None:intergenic 30.0%
GAATACAATACAACCCTATT+TGG - chr7_4:60265149-60265168 Msa1167800:intron 30.0%
GATTTGGAAAAGTAAAGGAA+AGG - chr7_4:60265267-60265286 Msa1167800:intron 30.0%
! AAGTAAAGGAAAGGGTATAT+AGG - chr7_4:60265276-60265295 Msa1167800:intron 30.0%
!!! GGGAGGATTTGTTTTTTTTA+GGG + chr7_4:60265332-60265351 None:intergenic 30.0%
!!! AGGGAGGATTTGTTTTTTTT+AGG + chr7_4:60265333-60265352 None:intergenic 30.0%
!! CATTATTGATTCTTGGACAA+GGG + chr7_4:60265352-60265371 None:intergenic 30.0%
!! CACCGTTTTTCAACATTTGT+CGG - chr7_4:60263240-60263259 Msa1167800:three_prime_UTR 35.0%
TTAGATTGCAACAATGGTGA+TGG - chr7_4:60263305-60263324 Msa1167800:three_prime_UTR 35.0%
AAAACCCAACGGCAAAATAT+AGG - chr7_4:60263417-60263436 Msa1167800:three_prime_UTR 35.0%
! AATGCCTATATTTTGCCGTT+GGG + chr7_4:60263424-60263443 None:intergenic 35.0%
GGCATTGCAGATTCAAAAAA+TGG - chr7_4:60263438-60263457 Msa1167800:three_prime_UTR 35.0%
!! GAGTCTTGTTCTTGAATGTT+AGG - chr7_4:60263752-60263771 Msa1167800:CDS 35.0%
ACATTTGTGAGATTTGTGGA+AGG - chr7_4:60263806-60263825 Msa1167800:intron 35.0%
TTCATTTCGGTTCTGTTCTT+TGG - chr7_4:60263840-60263859 Msa1167800:intron 35.0%
TCATTTCGGTTCTGTTCTTT+GGG - chr7_4:60263841-60263860 Msa1167800:intron 35.0%
! CAAATGTAGGTGATGATGTA+TGG + chr7_4:60264032-60264051 None:intergenic 35.0%
! TGATGTTGAATGATGGAGAT+GGG + chr7_4:60264059-60264078 None:intergenic 35.0%
! ATGATGTTGAATGATGGAGA+TGG + chr7_4:60264060-60264079 None:intergenic 35.0%
TATATACCACGTTGGTGTAA+AGG + chr7_4:60264714-60264733 None:intergenic 35.0%
! ATATATTCTGCTGCATTGAC+AGG - chr7_4:60264760-60264779 Msa1167800:intron 35.0%
! TATATTCTGCTGCATTGACA+GGG - chr7_4:60264761-60264780 Msa1167800:intron 35.0%
AATGAAGGATTGACAATGGA+AGG - chr7_4:60264922-60264941 Msa1167800:CDS 35.0%
! GAAGAAAAGGTATACCTCAT+AGG - chr7_4:60265040-60265059 Msa1167800:intron 35.0%
CATTAGAATGAGGAACCAAA+AGG + chr7_4:60265069-60265088 None:intergenic 35.0%
!!! CTTTTGGTTCCTCATTCTAA+TGG - chr7_4:60265067-60265086 Msa1167800:intron 35.0%
AGGGTTGTATTGTATTCCAA+GGG + chr7_4:60265146-60265165 None:intergenic 35.0%
TAGGGTTGTATTGTATTCCA+AGG + chr7_4:60265147-60265166 None:intergenic 35.0%
TACAATACAACCCTATTTGG+TGG - chr7_4:60265152-60265171 Msa1167800:intron 35.0%
ACAATACAACCCTATTTGGT+GGG - chr7_4:60265153-60265172 Msa1167800:intron 35.0%
! TAGGTTTTTCCCACCAAATA+GGG + chr7_4:60265165-60265184 None:intergenic 35.0%
TGAAAAAGATTAGGAGCCTT+TGG - chr7_4:60265218-60265237 Msa1167800:intron 35.0%
! TTCCAAATCATGAAGTACCT+TGG + chr7_4:60265256-60265275 None:intergenic 35.0%
!!! AAACTCCTTCTTTTTCGGTT+TGG - chr7_4:60265304-60265323 Msa1167800:CDS 35.0%
!!! AACTCCTTCTTTTTCGGTTT+GGG - chr7_4:60265305-60265324 Msa1167800:CDS 35.0%
!! GCATTATTGATTCTTGGACA+AGG + chr7_4:60265353-60265372 None:intergenic 35.0%
!! CACCGTTTTTCAACATTTGT+CGG - chr7_4:60263240-60263259 Msa1167800:three_prime_UTR 35.0%
TTAGATTGCAACAATGGTGA+TGG - chr7_4:60263305-60263324 Msa1167800:three_prime_UTR 35.0%
AAAACCCAACGGCAAAATAT+AGG - chr7_4:60263417-60263436 Msa1167800:three_prime_UTR 35.0%
! AATGCCTATATTTTGCCGTT+GGG + chr7_4:60263424-60263443 None:intergenic 35.0%
GGCATTGCAGATTCAAAAAA+TGG - chr7_4:60263438-60263457 Msa1167800:three_prime_UTR 35.0%
!! GAGTCTTGTTCTTGAATGTT+AGG - chr7_4:60263752-60263771 Msa1167800:CDS 35.0%
ACATTTGTGAGATTTGTGGA+AGG - chr7_4:60263806-60263825 Msa1167800:intron 35.0%
TTCATTTCGGTTCTGTTCTT+TGG - chr7_4:60263840-60263859 Msa1167800:intron 35.0%
TCATTTCGGTTCTGTTCTTT+GGG - chr7_4:60263841-60263860 Msa1167800:intron 35.0%
! CAAATGTAGGTGATGATGTA+TGG + chr7_4:60264032-60264051 None:intergenic 35.0%
! TGATGTTGAATGATGGAGAT+GGG + chr7_4:60264059-60264078 None:intergenic 35.0%
! ATGATGTTGAATGATGGAGA+TGG + chr7_4:60264060-60264079 None:intergenic 35.0%
TATATACCACGTTGGTGTAA+AGG + chr7_4:60264714-60264733 None:intergenic 35.0%
! ATATATTCTGCTGCATTGAC+AGG - chr7_4:60264760-60264779 Msa1167800:intron 35.0%
! TATATTCTGCTGCATTGACA+GGG - chr7_4:60264761-60264780 Msa1167800:intron 35.0%
AATGAAGGATTGACAATGGA+AGG - chr7_4:60264922-60264941 Msa1167800:CDS 35.0%
! GAAGAAAAGGTATACCTCAT+AGG - chr7_4:60265040-60265059 Msa1167800:intron 35.0%
CATTAGAATGAGGAACCAAA+AGG + chr7_4:60265069-60265088 None:intergenic 35.0%
!!! CTTTTGGTTCCTCATTCTAA+TGG - chr7_4:60265067-60265086 Msa1167800:intron 35.0%
AGGGTTGTATTGTATTCCAA+GGG + chr7_4:60265146-60265165 None:intergenic 35.0%
TAGGGTTGTATTGTATTCCA+AGG + chr7_4:60265147-60265166 None:intergenic 35.0%
TACAATACAACCCTATTTGG+TGG - chr7_4:60265152-60265171 Msa1167800:intron 35.0%
ACAATACAACCCTATTTGGT+GGG - chr7_4:60265153-60265172 Msa1167800:intron 35.0%
! TAGGTTTTTCCCACCAAATA+GGG + chr7_4:60265165-60265184 None:intergenic 35.0%
TGAAAAAGATTAGGAGCCTT+TGG - chr7_4:60265218-60265237 Msa1167800:intron 35.0%
! TTCCAAATCATGAAGTACCT+TGG + chr7_4:60265256-60265275 None:intergenic 35.0%
!!! AAACTCCTTCTTTTTCGGTT+TGG - chr7_4:60265304-60265323 Msa1167800:CDS 35.0%
!!! AACTCCTTCTTTTTCGGTTT+GGG - chr7_4:60265305-60265324 Msa1167800:CDS 35.0%
!! GCATTATTGATTCTTGGACA+AGG + chr7_4:60265353-60265372 None:intergenic 35.0%
TTCAACAATGGTTCAAGCCA+AGG + chr7_4:60263218-60263237 None:intergenic 40.0%
CAAAGACCATCAAGTCATTC+AGG - chr7_4:60263361-60263380 Msa1167800:three_prime_UTR 40.0%
TGCATACCTGAATGACTTGA+TGG + chr7_4:60263370-60263389 None:intergenic 40.0%
CAAGTCATTCAGGTATGCAT+AGG - chr7_4:60263371-60263390 Msa1167800:three_prime_UTR 40.0%
! CAATGCCTATATTTTGCCGT+TGG + chr7_4:60263425-60263444 None:intergenic 40.0%
! GTCAGAGATTCAGAAAGTGT+TGG - chr7_4:60263690-60263709 Msa1167800:CDS 40.0%
!! CAGAAAGTGTTGGACATTAG+TGG - chr7_4:60263700-60263719 Msa1167800:CDS 40.0%
TTAGGCCTCAACCAAAATCT+GGG - chr7_4:60263770-60263789 Msa1167800:CDS 40.0%
GCTCACATTTGTGAGATTTG+TGG - chr7_4:60263802-60263821 Msa1167800:intron 40.0%
!! GGAGCTTGTTGGATTCATTT+CGG - chr7_4:60263827-60263846 Msa1167800:intron 40.0%
!! GTTCTGTTCTTTGGGATGTA+AGG - chr7_4:60263849-60263868 Msa1167800:intron 40.0%
TAAAAGCCTTTACACCAACG+TGG - chr7_4:60264705-60264724 Msa1167800:intron 40.0%
! ATATTCTGCTGCATTGACAG+GGG - chr7_4:60264762-60264781 Msa1167800:intron 40.0%
TCAGAAGAAGAATTGCGTGA+AGG - chr7_4:60264961-60264980 Msa1167800:CDS 40.0%
CTTCTCCTTGCATTTAAAGG+AGG + chr7_4:60265024-60265043 None:intergenic 40.0%
GTTCCTCATTCTAATGGGAT+GGG - chr7_4:60265073-60265092 Msa1167800:intron 40.0%
AATCCCATCCCATTAGAATG+AGG + chr7_4:60265079-60265098 None:intergenic 40.0%
! CTAGGTTTTTCCCACCAAAT+AGG + chr7_4:60265166-60265185 None:intergenic 40.0%
AAAAGATTAGGAGCCTTTGG+AGG - chr7_4:60265221-60265240 Msa1167800:intron 40.0%
AAAGATTAGGAGCCTTTGGA+GGG - chr7_4:60265222-60265241 Msa1167800:intron 40.0%
! GTCCAAGGTACTTCATGATT+TGG - chr7_4:60265251-60265270 Msa1167800:intron 40.0%
!! TATTGATTCTTGGACAAGGG+AGG + chr7_4:60265349-60265368 None:intergenic 40.0%
TTCAACAATGGTTCAAGCCA+AGG + chr7_4:60263218-60263237 None:intergenic 40.0%
CAAAGACCATCAAGTCATTC+AGG - chr7_4:60263361-60263380 Msa1167800:three_prime_UTR 40.0%
TGCATACCTGAATGACTTGA+TGG + chr7_4:60263370-60263389 None:intergenic 40.0%
CAAGTCATTCAGGTATGCAT+AGG - chr7_4:60263371-60263390 Msa1167800:three_prime_UTR 40.0%
! CAATGCCTATATTTTGCCGT+TGG + chr7_4:60263425-60263444 None:intergenic 40.0%
! GTCAGAGATTCAGAAAGTGT+TGG - chr7_4:60263690-60263709 Msa1167800:CDS 40.0%
!! CAGAAAGTGTTGGACATTAG+TGG - chr7_4:60263700-60263719 Msa1167800:CDS 40.0%
TTAGGCCTCAACCAAAATCT+GGG - chr7_4:60263770-60263789 Msa1167800:CDS 40.0%
GCTCACATTTGTGAGATTTG+TGG - chr7_4:60263802-60263821 Msa1167800:intron 40.0%
!! GGAGCTTGTTGGATTCATTT+CGG - chr7_4:60263827-60263846 Msa1167800:intron 40.0%
!! GTTCTGTTCTTTGGGATGTA+AGG - chr7_4:60263849-60263868 Msa1167800:intron 40.0%
TAAAAGCCTTTACACCAACG+TGG - chr7_4:60264705-60264724 Msa1167800:intron 40.0%
! ATATTCTGCTGCATTGACAG+GGG - chr7_4:60264762-60264781 Msa1167800:intron 40.0%
TCAGAAGAAGAATTGCGTGA+AGG - chr7_4:60264961-60264980 Msa1167800:CDS 40.0%
CTTCTCCTTGCATTTAAAGG+AGG + chr7_4:60265024-60265043 None:intergenic 40.0%
GTTCCTCATTCTAATGGGAT+GGG - chr7_4:60265073-60265092 Msa1167800:intron 40.0%
AATCCCATCCCATTAGAATG+AGG + chr7_4:60265079-60265098 None:intergenic 40.0%
! CTAGGTTTTTCCCACCAAAT+AGG + chr7_4:60265166-60265185 None:intergenic 40.0%
AAAAGATTAGGAGCCTTTGG+AGG - chr7_4:60265221-60265240 Msa1167800:intron 40.0%
AAAGATTAGGAGCCTTTGGA+GGG - chr7_4:60265222-60265241 Msa1167800:intron 40.0%
! GTCCAAGGTACTTCATGATT+TGG - chr7_4:60265251-60265270 Msa1167800:intron 40.0%
!! TATTGATTCTTGGACAAGGG+AGG + chr7_4:60265349-60265368 None:intergenic 40.0%
AACAATGGTTCAAGCCAAGG+AGG + chr7_4:60263215-60263234 None:intergenic 45.0%
! TGTATTTGGTGGAATGGGTC+AGG - chr7_4:60263511-60263530 Msa1167800:three_prime_UTR 45.0%
GTTAGGCCTCAACCAAAATC+TGG - chr7_4:60263769-60263788 Msa1167800:CDS 45.0%
!!! CCTTTCCCAGATTTTGGTTG+AGG + chr7_4:60263778-60263797 None:intergenic 45.0%
CCTCAACCAAAATCTGGGAA+AGG - chr7_4:60263775-60263794 Msa1167800:CDS 45.0%
! GCTACTCCTTTCCCAGATTT+TGG + chr7_4:60263784-60263803 None:intergenic 45.0%
GATTTGTGGAAGGAGCTTGT+TGG - chr7_4:60263816-60263835 Msa1167800:intron 45.0%
! TGTAGGTGATGATGTATGGG+TGG + chr7_4:60264028-60264047 None:intergenic 45.0%
! GGAGATGGGCTTTCAAATGT+AGG + chr7_4:60264045-60264064 None:intergenic 45.0%
TGGAGATGCAAGCTTTGCTT+TGG - chr7_4:60264891-60264910 Msa1167800:CDS 45.0%
AGATGCAAGCTTTGCTTTGG+AGG - chr7_4:60264894-60264913 Msa1167800:CDS 45.0%
! GATGCAAGCTTTGCTTTGGA+GGG - chr7_4:60264895-60264914 Msa1167800:CDS 45.0%
!! GCTTTGGAGGGTAAGAATGA+AGG - chr7_4:60264907-60264926 Msa1167800:CDS 45.0%
CTTGCATTTAAAGGAGGTGG+AGG + chr7_4:60265018-60265037 None:intergenic 45.0%
CTCCACCTCCTTTAAATGCA+AGG - chr7_4:60265016-60265035 Msa1167800:intron 45.0%
CTCCTTGCATTTAAAGGAGG+TGG + chr7_4:60265021-60265040 None:intergenic 45.0%
!! ATACCTCATAGGGCACCTTT+TGG - chr7_4:60265051-60265070 Msa1167800:intron 45.0%
GGTTCCTCATTCTAATGGGA+TGG - chr7_4:60265072-60265091 Msa1167800:intron 45.0%
! AAGATTAGGAGCCTTTGGAG+GGG - chr7_4:60265223-60265242 Msa1167800:intron 45.0%
AACAATGGTTCAAGCCAAGG+AGG + chr7_4:60263215-60263234 None:intergenic 45.0%
! TGTATTTGGTGGAATGGGTC+AGG - chr7_4:60263511-60263530 Msa1167800:three_prime_UTR 45.0%
GTTAGGCCTCAACCAAAATC+TGG - chr7_4:60263769-60263788 Msa1167800:CDS 45.0%
!!! CCTTTCCCAGATTTTGGTTG+AGG + chr7_4:60263778-60263797 None:intergenic 45.0%
CCTCAACCAAAATCTGGGAA+AGG - chr7_4:60263775-60263794 Msa1167800:CDS 45.0%
! GCTACTCCTTTCCCAGATTT+TGG + chr7_4:60263784-60263803 None:intergenic 45.0%
GATTTGTGGAAGGAGCTTGT+TGG - chr7_4:60263816-60263835 Msa1167800:intron 45.0%
! TGTAGGTGATGATGTATGGG+TGG + chr7_4:60264028-60264047 None:intergenic 45.0%
! GGAGATGGGCTTTCAAATGT+AGG + chr7_4:60264045-60264064 None:intergenic 45.0%
TGGAGATGCAAGCTTTGCTT+TGG - chr7_4:60264891-60264910 Msa1167800:CDS 45.0%
AGATGCAAGCTTTGCTTTGG+AGG - chr7_4:60264894-60264913 Msa1167800:CDS 45.0%
! GATGCAAGCTTTGCTTTGGA+GGG - chr7_4:60264895-60264914 Msa1167800:CDS 45.0%
!! GCTTTGGAGGGTAAGAATGA+AGG - chr7_4:60264907-60264926 Msa1167800:CDS 45.0%
CTTGCATTTAAAGGAGGTGG+AGG + chr7_4:60265018-60265037 None:intergenic 45.0%
CTCCACCTCCTTTAAATGCA+AGG - chr7_4:60265016-60265035 Msa1167800:intron 45.0%
CTCCTTGCATTTAAAGGAGG+TGG + chr7_4:60265021-60265040 None:intergenic 45.0%
!! ATACCTCATAGGGCACCTTT+TGG - chr7_4:60265051-60265070 Msa1167800:intron 45.0%
GGTTCCTCATTCTAATGGGA+TGG - chr7_4:60265072-60265091 Msa1167800:intron 45.0%
! AAGATTAGGAGCCTTTGGAG+GGG - chr7_4:60265223-60265242 Msa1167800:intron 45.0%
!!! TTTTTTTTTATTAATGTATT+TGG - chr7_4:60263497-60263516 Msa1167800:three_prime_UTR 5.0%
!!! TTTTTTTTTATTAATGTATT+TGG - chr7_4:60263497-60263516 Msa1167800:three_prime_UTR 5.0%
! GGTGATGATGTATGGGTGGT+GGG + chr7_4:60264024-60264043 None:intergenic 50.0%
! AGGTGATGATGTATGGGTGG+TGG + chr7_4:60264025-60264044 None:intergenic 50.0%
GCATTTAAAGGAGGTGGAGG+AGG + chr7_4:60265015-60265034 None:intergenic 50.0%
!! GAACCAAAAGGTGCCCTATG+AGG + chr7_4:60265057-60265076 None:intergenic 50.0%
! AGATTAGGAGCCTTTGGAGG+GGG - chr7_4:60265224-60265243 Msa1167800:intron 50.0%
TTGGACAAAACCCCCTCCAA+AGG + chr7_4:60265237-60265256 None:intergenic 50.0%
!! TTTGGAGGGGGTTTTGTCCA+AGG - chr7_4:60265236-60265255 Msa1167800:intron 50.0%
GGGACCCAAACCGAAAAAGA+AGG + chr7_4:60265312-60265331 None:intergenic 50.0%
! GGTGATGATGTATGGGTGGT+GGG + chr7_4:60264024-60264043 None:intergenic 50.0%
! AGGTGATGATGTATGGGTGG+TGG + chr7_4:60264025-60264044 None:intergenic 50.0%
GCATTTAAAGGAGGTGGAGG+AGG + chr7_4:60265015-60265034 None:intergenic 50.0%
!! GAACCAAAAGGTGCCCTATG+AGG + chr7_4:60265057-60265076 None:intergenic 50.0%
! AGATTAGGAGCCTTTGGAGG+GGG - chr7_4:60265224-60265243 Msa1167800:intron 50.0%
TTGGACAAAACCCCCTCCAA+AGG + chr7_4:60265237-60265256 None:intergenic 50.0%
!! TTTGGAGGGGGTTTTGTCCA+AGG - chr7_4:60265236-60265255 Msa1167800:intron 50.0%
GGGACCCAAACCGAAAAAGA+AGG + chr7_4:60265312-60265331 None:intergenic 50.0%
!! ACACAGTGTTGGTGCCTCCT+TGG - chr7_4:60263198-60263217 Msa1167800:three_prime_UTR 55.0%
! GCTGCATTGACAGGGGAACA+TGG - chr7_4:60264769-60264788 Msa1167800:intron 55.0%
!! ACACAGTGTTGGTGCCTCCT+TGG - chr7_4:60263198-60263217 Msa1167800:three_prime_UTR 55.0%
! GCTGCATTGACAGGGGAACA+TGG - chr7_4:60264769-60264788 Msa1167800:intron 55.0%
! GGAGGTGGAGGAGGCGTGAG+AGG + chr7_4:60265006-60265025 None:intergenic 70.0%
! GGAGGTGGAGGAGGCGTGAG+AGG + chr7_4:60265006-60265025 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 60263188 60265479 60263188 ID=Msa1167800;Name=Msa1167800
chr7_4 mRNA 60263188 60265479 60263188 ID=Msa1167800-mRNA-1;Parent=Msa1167800;Name=Msa1167800-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.5|0.33|1|1|1|3|393|208
chr7_4 exon 60263188 60263796 60263188 ID=Msa1167800-mRNA-1:exon:18803;Parent=Msa1167800-mRNA-1
chr7_4 exon 60264797 60265012 60264797 ID=Msa1167800-mRNA-1:exon:18802;Parent=Msa1167800-mRNA-1
chr7_4 exon 60265285 60265479 60265285 ID=Msa1167800-mRNA-1:exon:18801;Parent=Msa1167800-mRNA-1
chr7_4 CDS 60265285 60265479 60265285 ID=Msa1167800-mRNA-1:cds;Parent=Msa1167800-mRNA-1
chr7_4 CDS 60264797 60265012 60264797 ID=Msa1167800-mRNA-1:cds;Parent=Msa1167800-mRNA-1
chr7_4 CDS 60263581 60263796 60263581 ID=Msa1167800-mRNA-1:cds;Parent=Msa1167800-mRNA-1
chr7_4 three_prime_UTR 60263188 60263580 60263188 ID=Msa1167800-mRNA-1:three_prime_utr;Parent=Msa1167800-mRNA-1
Gene Sequence

>Msa1167800

TTGAAACAGGACACAGTGTTGGTGCCTCCTTGGCTTGAACCATTGTTGAAAACACCGTTTTTCAACATTTGTCGGATTCACGCTGATGCAGCTAGAAATGAGTGTAACATGTATTGTTTAGATTGCAACAATGGTGATGGTGCTTTTTGCTTTTATTGTCGTTCTTCAAGACACAAAGACCATCAAGTCATTCAGATAAGAAGATCTTCATATCATGATGTAGTTCGTGTGTCAGAGATTCAGAAAGTGTTGGACATTAGTGGAGTGCAAACATATGTGATAAACAGTGCTAGAGTCTTGTTCTTGAATGTTAGGCCTCAACCAAAATCTGGGAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGGAGCTTGTTGGATTCATTTCGGTTCTGTTCTTTGGGATGTAAGCTTGAAAGAATAAAGAAAAATGGAGATGCAAGCTTTGCTTTGGAGGGTAAGAATGAAGGATTGACAATGGAAGGAGTGTCAAGTAGTAGATCAGAAGAAGAATTGCGTGAAGGCTCAACACAAGATATGTATCCTCTCACGCCTCCTCCACCTCCTTTAAATGCAAGGAGAAGAAAAGGTATACCTCATAGGGCACCTTTTGGTTCCTCATTCTAA
Protein sequence

>Msa1167800

LKQDTVLVPPWLEPLLKTPFFNICRIHADAARNECNMYCLDCNNGDGAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAHICEICGRSLLDSFRFCSLGCKLERIKKNGDASFALEGKNEGLTMEGVSSSRSEEELREGSTQDMYPLTPPPPPLNARRRKGIPHRAPFGSSF*