AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1168780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1168780 MtrunA17_Chr7g0264171 90.081 615 29 5 4 587 1 614 0.0 1128
Msa1168780 MtrunA17_Chr1g0181211 53.277 595 224 15 25 574 18 603 0.0 552
Msa1168780 MtrunA17_Chr7g0264161 71.637 342 30 5 43 358 1 301 6.01e-165 471
Msa1168780 MtrunA17_Chr2g0326761 49.907 537 224 13 24 527 1 525 1.34e-163 483
Msa1168780 MtrunA17_Chr4g0028971 50.746 536 218 12 31 527 9 537 3.90e-158 469
Msa1168780 MtrunA17_Chr1g0199681 45.763 590 210 21 25 538 85 640 6.57e-145 435
Msa1168780 MtrunA17_Chr3g0115271 40.820 512 246 19 30 509 15 501 7.54e-106 330
Msa1168780 MtrunA17_Chr5g0424931 37.721 509 214 19 29 485 14 471 2.63e-83 270
Msa1168780 MtrunA17_Chr5g0417281 32.731 553 254 20 29 528 6 493 3.44e-73 243
Msa1168780 MtrunA17_Chr5g0436761 35.071 422 201 13 29 424 7 381 2.82e-66 223
Msa1168780 MtrunA17_Chr1g0156321 32.957 443 228 12 27 434 36 444 2.33e-62 221
Msa1168780 MtrunA17_Chr2g0282961 36.066 366 190 6 30 378 49 387 1.27e-61 214
Msa1168780 MtrunA17_Chr4g0046371 35.849 371 188 10 30 378 34 376 1.83e-60 213
Msa1168780 MtrunA17_Chr4g0070181 33.666 401 206 11 29 407 18 380 9.61e-60 215
Msa1168780 MtrunA17_Chr2g0301251 35.580 371 189 9 29 380 18 357 1.98e-59 214
Msa1168780 MtrunA17_Chr2g0285461 34.673 398 209 11 29 406 18 384 5.56e-59 211
Msa1168780 MtrunA17_Chr1g0178011 33.014 418 221 11 29 427 7 384 7.84e-59 203
Msa1168780 MtrunA17_Chr2g0276781 34.474 409 210 11 26 412 15 387 4.24e-58 206
Msa1168780 MtrunA17_Chr2g0289221 34.595 370 135 10 31 358 17 321 1.28e-57 197
Msa1168780 MtrunA17_Chr5g0433301 34.828 379 197 10 29 387 19 367 2.83e-57 206
Msa1168780 MtrunA17_Chr8g0376771 34.171 398 210 11 29 406 18 383 5.48e-57 206
Msa1168780 MtrunA17_Chr4g0009751 34.264 394 207 10 32 405 17 378 1.61e-56 201
Msa1168780 MtrunA17_Chr3g0109391 34.737 380 196 11 29 387 21 369 2.61e-56 203
Msa1168780 MtrunA17_Chr2g0277461 33.673 392 196 14 31 402 10 357 4.07e-56 196
Msa1168780 MtrunA17_Chr8g0385791 34.750 400 196 13 34 407 59 419 9.56e-56 202
Msa1168780 MtrunA17_Chr7g0239061 33.842 393 207 11 34 406 14 373 1.18e-55 199
Msa1168780 MtrunA17_Chr2g0326281 34.321 405 198 12 34 399 56 431 1.07e-53 196
Msa1168780 MtrunA17_Chr4g0029671 35.038 391 196 10 34 397 54 413 1.38e-53 195
Msa1168780 MtrunA17_Chr8g0346711 34.103 390 206 9 28 399 23 379 1.45e-53 193
Msa1168780 MtrunA17_Chr8g0389081 34.677 372 191 11 31 381 29 369 2.27e-52 193
Msa1168780 MtrunA17_Chr5g0417211 33.071 381 176 11 31 386 9 335 4.87e-50 178
Msa1168780 MtrunA17_Chr2g0277531 32.267 344 175 13 31 358 17 318 6.30e-40 148
Msa1168780 MtrunA17_Chr5g0425261 29.973 377 198 11 31 385 9 341 1.06e-38 146
Msa1168780 MtrunA17_Chr5g0424801 29.380 371 197 10 31 379 9 336 5.40e-38 144
Msa1168780 MtrunA17_Chr5g0424741 28.175 504 241 20 29 448 7 473 2.94e-37 145
Msa1168780 MtrunA17_Chr5g0425661 34.951 206 97 7 30 211 33 225 3.62e-32 124
Msa1168780 MtrunA17_Chr8g0356211 28.754 313 146 13 136 426 2 259 5.69e-25 105
Msa1168780 MtrunA17_Chr5g0425651 35.652 115 64 4 281 387 9 121 1.56e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1168780 AT2G28350.2 44.724 597 256 18 29 572 5 580 3.36e-147 440
Msa1168780 AT2G28350.1 44.724 597 256 18 29 572 5 580 5.10e-147 441
Msa1168780 AT4G30080.1 52.043 465 179 10 29 459 14 468 1.31e-146 439
Msa1168780 AT1G77850.1 37.662 539 293 13 28 535 13 539 9.26e-102 320
Msa1168780 AT1G77850.2 37.662 539 293 13 28 535 13 539 1.14e-101 320
Msa1168780 AT1G19220.1 35.250 400 208 10 29 409 18 385 4.83e-61 219
Msa1168780 AT1G30330.3 34.360 422 222 12 4 406 1 386 4.01e-60 215
Msa1168780 AT1G30330.2 34.360 422 222 12 4 406 1 386 4.01e-60 215
Msa1168780 AT1G30330.1 35.013 397 209 11 29 406 18 384 2.75e-59 213
Msa1168780 AT1G19850.2 34.794 388 193 11 18 378 23 377 3.02e-59 213
Msa1168780 AT1G19850.1 34.794 388 193 11 18 378 34 388 3.93e-59 212
Msa1168780 AT5G60450.2 33.417 398 209 11 25 396 32 399 6.23e-58 207
Msa1168780 AT5G62000.2 33.258 445 210 13 1 397 5 410 6.76e-58 208
Msa1168780 AT5G62000.5 33.258 445 210 13 1 397 5 410 6.76e-58 208
Msa1168780 AT5G62000.3 33.258 445 210 13 1 397 5 410 6.76e-58 208
Msa1168780 AT5G62000.1 33.258 445 210 13 1 397 5 410 6.76e-58 208
Msa1168780 AT1G59750.4 33.002 503 268 17 34 508 22 483 9.72e-58 205
Msa1168780 AT1G59750.1 32.871 505 271 18 34 508 22 488 9.88e-58 205
Msa1168780 AT1G59750.3 32.871 505 271 18 34 508 22 488 9.88e-58 205
Msa1168780 AT5G62000.4 33.258 445 210 13 1 397 5 410 1.01e-57 208
Msa1168780 AT5G37020.2 34.737 380 196 11 29 387 17 365 1.66e-57 206
Msa1168780 AT1G59750.2 33.202 506 265 19 34 508 22 485 3.13e-57 204
Msa1168780 AT5G37020.1 34.737 380 196 11 29 387 17 365 3.37e-57 206
Msa1168780 AT5G60450.1 33.676 389 202 11 34 396 65 423 4.27e-57 205
Msa1168780 AT5G20730.2 33.000 400 217 10 29 409 19 386 1.21e-56 206
Msa1168780 AT4G23980.2 32.061 393 217 8 34 408 12 372 1.62e-55 199
Msa1168780 AT4G23980.1 32.808 381 206 8 34 396 12 360 1.66e-55 199
Msa1168780 AT2G33860.1 32.584 445 235 16 34 447 54 464 4.46e-55 197
Msa1168780 AT3G61830.1 32.117 411 217 10 34 423 25 394 1.91e-52 189
Msa1168780 AT2G46530.1 33.060 366 188 11 34 378 21 350 2.28e-51 186
Msa1168780 AT2G46530.3 33.060 366 188 11 34 378 42 371 4.65e-51 186
Msa1168780 AT1G35520.1 33.162 389 206 10 34 406 27 377 3.73e-49 180
Msa1168780 AT1G35240.1 31.807 393 206 10 34 406 27 377 3.75e-49 180
Msa1168780 AT1G34310.1 32.727 385 207 11 31 399 24 372 5.51e-48 177
Msa1168780 AT1G35540.1 32.190 379 206 8 34 396 27 370 6.93e-48 177
Msa1168780 AT1G34410.1 31.830 399 198 11 34 406 27 377 1.54e-47 176
Msa1168780 AT5G20730.3 41.475 217 105 5 29 227 19 231 6.40e-46 174
Msa1168780 AT5G20730.1 41.475 217 105 5 29 227 19 231 8.93e-46 174
Msa1168780 AT1G34390.1 31.152 382 209 9 34 399 27 370 8.56e-45 168
Msa1168780 AT1G34170.1 30.749 387 211 11 12 378 3 352 4.42e-44 164
Msa1168780 AT3G61830.2 31.818 352 190 8 81 423 33 343 6.59e-43 162
Msa1168780 AT5G37020.3 36.330 267 136 7 128 387 31 270 2.20e-42 162
Msa1168780 AT2G33860.2 33.036 336 179 11 128 447 2 307 7.57e-42 157
Msa1168780 AT1G34170.2 30.233 387 187 12 12 378 3 326 4.24e-39 150
Msa1168780 AT1G34170.3 30.233 387 187 12 12 378 3 326 1.81e-38 149
Msa1168780 AT2G46530.2 33.721 258 135 7 127 378 36 263 5.02e-37 144
Msa1168780 AT1G43950.1 35.610 205 107 8 34 222 27 222 3.33e-28 113
Msa1168780 ATMG00940.1 32.000 150 94 3 210 353 1 148 1.11e-15 75.5
Msa1168780 AT1G13260.1 30.657 137 87 4 115 243 175 311 5.31e-11 65.1

Find 138 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAAGTTGGCATTGGAAAT+TGG 0.228346 7_4:-61600544 None:intergenic
TGGAATGAAAGACGGAATTT+TGG 0.237258 7_4:-61598835 None:intergenic
CATCAACGTGTCTGAAATTA+AGG 0.241218 7_4:+61598977 Msa1168780:CDS
TGGCCATCAATTGGGAAATC+TGG 0.249420 7_4:-61600524 None:intergenic
GGCATTTCAGGCACGTTTAT+AGG 0.250063 7_4:+61599165 Msa1168780:CDS
GCATTTCAGGCACGTTTATA+GGG 0.272489 7_4:+61599166 Msa1168780:CDS
CTTGTGAAAACTTCTTTAAT+TGG 0.278075 7_4:+61599602 Msa1168780:CDS
CAGCTATGGCATGCCGTTGC+AGG 0.280375 7_4:+61598714 Msa1168780:CDS
ATGGCGAAAAGTGGCATTTC+AGG 0.309403 7_4:+61599153 Msa1168780:CDS
CGGAACTATTGCTTCTGTTC+AGG 0.311558 7_4:+61599712 Msa1168780:CDS
GTTGGAGTCGATCCTTTGTT+AGG 0.313766 7_4:+61599335 Msa1168780:CDS
CTCCCAGATTTCCCAATTGA+TGG 0.331554 7_4:+61600521 Msa1168780:CDS
TTAGGATTTAGAAGGTTGTT+TGG 0.339574 7_4:-61600566 None:intergenic
TTCAGCTAACCCTCCTCTTC+AGG 0.348707 7_4:+61599109 Msa1168780:intron
TTGGAATATTAGGATTTAGA+AGG 0.349891 7_4:-61600574 None:intergenic
TTTGCAATGCCAAGTTATTT+GGG 0.350490 7_4:-61600757 None:intergenic
TTGGAATTCGGAGGGCTAAA+AGG 0.350812 7_4:+61599303 Msa1168780:CDS
TATTATTATTAAACGGTTGT+TGG 0.355810 7_4:-61600712 None:intergenic
ATTGGAAATTGGCCATCAAT+TGG 0.356580 7_4:-61600533 None:intergenic
CATGCCGGCAGGACTAGTTT+CGG 0.360765 7_4:-61600609 None:intergenic
AGAAGGTTGTTTGGAAAAGT+TGG 0.365277 7_4:-61600557 None:intergenic
TGGAAATCTGGTAGTGGAAT+TGG 0.365957 7_4:+61599359 Msa1168780:intron
CTGCGAATGTTTCTTCGCAT+TGG 0.366575 7_4:-61601015 None:intergenic
CAGTGTCGACTTGTATTGTT+TGG 0.368403 7_4:-61600886 None:intergenic
AATGGAAGATTATGAAAATC+TGG 0.372719 7_4:-61600668 None:intergenic
TCAAGGATAAGTTGGTTTAT+CGG 0.374081 7_4:+61599692 Msa1168780:CDS
GGAGCCAGGCATGGTCATTT+CGG 0.375741 7_4:+61600635 Msa1168780:CDS
TTTGATAATGATGGTGTTGC+TGG 0.376636 7_4:+61598954 Msa1168780:CDS
CTAACTTGGTTAATATTCAT+AGG 0.385591 7_4:-61598930 None:intergenic
GGTAATCTCAATTTCTTCCT+TGG 0.395833 7_4:-61600494 None:intergenic
AAGAGGCATTTGTTGACAAC+TGG 0.395938 7_4:+61599197 Msa1168780:CDS
TTGGAACAGCACTTCAGATT+AGG 0.401029 7_4:+61599621 Msa1168780:CDS
GCGATCTTCATGTTGGAATT+CGG 0.404653 7_4:+61599291 Msa1168780:CDS
CTGGCTCCCTGCATGCCGGC+AGG 0.407927 7_4:-61600620 None:intergenic
GCCATCTTGAACCTCATTCC+AGG 0.409391 7_4:-61599650 None:intergenic
TTAAACGGTTGTTGGAAACT+AGG 0.416552 7_4:-61600704 None:intergenic
AACTAGTCCTGCCGGCATGC+AGG 0.419630 7_4:+61600613 Msa1168780:CDS
CAATCCAACTGAGATGAATA+TGG 0.421601 7_4:+61598647 Msa1168780:CDS
AAAACATGTGAGTTAACTTC+TGG 0.421701 7_4:-61598753 None:intergenic
AGCGACAAGAAACTTGCGTC+TGG 0.427650 7_4:+61599236 Msa1168780:CDS
TTGGAAATTGGCCATCAATT+GGG 0.428714 7_4:-61600532 None:intergenic
TGCACAATCTTCAGAGAAAC+CGG 0.428735 7_4:+61600829 Msa1168780:CDS
GTCGCAATATTATTATTAAA+CGG 0.430671 7_4:-61600719 None:intergenic
CTGCCGGCATGCAGGGAGCC+AGG 0.432868 7_4:+61600621 Msa1168780:CDS
ACATTAGAGATGAAACATTC+AGG 0.433701 7_4:+61601043 Msa1168780:CDS
GAAATGTTCTCACTGGTGTT+CGG 0.434122 7_4:-61600782 None:intergenic
AGTTGAAGCAATAAGATATA+TGG 0.445009 7_4:+61598863 Msa1168780:CDS
CTAGGCTGAAAGAGACCTAA+TGG 0.448362 7_4:-61600686 None:intergenic
CATCATTATCAAAACTAACT+TGG 0.449861 7_4:-61598944 None:intergenic
TGATGAGTCCTCAGTTTCAA+TGG 0.449908 7_4:-61599672 None:intergenic
GATAATAAACTTCGAAGAAA+CGG 0.452871 7_4:+61599434 Msa1168780:CDS
GCTAATAAGTGATGGAATGA+TGG 0.454476 7_4:+61599472 Msa1168780:CDS
ATGCCGGCAGGACTAGTTTC+GGG 0.456648 7_4:-61600608 None:intergenic
TTCTTCCTTGGCGGTATGAA+AGG 0.458131 7_4:-61600482 None:intergenic
CGCCGAGCATGCATGTGAAC+CGG 0.459270 7_4:+61598794 Msa1168780:CDS
AGTTTCTTGTCGCTGACAAA+AGG 0.461470 7_4:-61599227 None:intergenic
CACCGGTTCACATGCATGCT+CGG 0.471821 7_4:-61598796 None:intergenic
AAGTGATGGAATGATGGGTA+GGG 0.472687 7_4:+61599478 Msa1168780:CDS
GACTCCATATTCATCTCAGT+TGG 0.472803 7_4:-61598651 None:intergenic
TTGGAGTCGATCCTTTGTTA+GGG 0.473989 7_4:+61599336 Msa1168780:CDS
ATTTGTCCTGCACCACCTTA+CGG 0.476461 7_4:+61599383 Msa1168780:CDS
CGAAGAAACGGTAAAGGTAA+TGG 0.476494 7_4:+61599446 Msa1168780:CDS
GTTGTCAACAAATGCCTCTT+CGG 0.480938 7_4:-61599194 None:intergenic
TTGTTTGGAAAAGTTGGCAT+TGG 0.489751 7_4:-61600551 None:intergenic
AAGTTATTTGGGACAGTCAT+CGG 0.489998 7_4:-61600746 None:intergenic
GGCCATCAATTGGGAAATCT+GGG 0.492331 7_4:-61600523 None:intergenic
AGGACTCATCAAGGATAAGT+TGG 0.493550 7_4:+61599684 Msa1168780:CDS
CTTCAGATTAGGTGGTGTCC+TGG 0.494054 7_4:+61599632 Msa1168780:CDS
TGGTGCGGCTTTGCATGATC+CGG 0.495348 7_4:-61600848 None:intergenic
AATCTCAATTTCTTCCTTGG+CGG 0.497432 7_4:-61600491 None:intergenic
CATCAGATGTACGTGTCGGC+AGG 0.505339 7_4:-61600967 None:intergenic
TAAGTGATGGAATGATGGGT+AGG 0.517866 7_4:+61599477 Msa1168780:CDS
TTCAGGCTGCTGATCCGTCA+TGG 0.519149 7_4:+61599729 Msa1168780:CDS
ACTAGTCCTGCCGGCATGCA+GGG 0.520362 7_4:+61600614 Msa1168780:CDS
ATCTTCATGTTGGAATTCGG+AGG 0.523611 7_4:+61599294 Msa1168780:CDS
GGCATGCAGGGAGCCAGGCA+TGG 0.527776 7_4:+61600626 Msa1168780:CDS
AAGACCGAAATGACCATGCC+TGG 0.532259 7_4:-61600639 None:intergenic
AATCCTCCGTAAGGTGGTGC+AGG 0.533772 7_4:-61599389 None:intergenic
AGCGTTTCTGCACAATATCT+AGG 0.540389 7_4:-61599068 None:intergenic
GCGACAAGAAACTTGCGTCT+GGG 0.540853 7_4:+61599237 Msa1168780:CDS
GGCGGTATGAAAGGCGAAAG+AGG 0.541655 7_4:-61600473 None:intergenic
GAGTAAGCACTGAAATTCAC+CGG 0.548533 7_4:-61598813 None:intergenic
GATGACTGTCCCAAATAACT+TGG 0.549303 7_4:+61600748 Msa1168780:CDS
AGGATGTTCATGGCGAAAAG+TGG 0.550349 7_4:+61599144 Msa1168780:CDS
CGACAAGAAACTTGCGTCTG+GGG 0.550603 7_4:+61599238 Msa1168780:CDS
AATGGATTGCTAATAAGTGA+TGG 0.550837 7_4:+61599464 Msa1168780:CDS
TTACCCGAAACTAGTCCTGC+CGG 0.553790 7_4:+61600605 Msa1168780:CDS
AAGATTATGAAAATCTGGTA+AGG 0.555027 7_4:-61600663 None:intergenic
GCTAAAAGGCGAAATAATGT+TGG 0.555377 7_4:+61599317 Msa1168780:CDS
ATGCCTGGCTCCCTGCATGC+CGG 0.557141 7_4:-61600624 None:intergenic
GTGATGGAATGATGGGTAGG+GGG 0.558347 7_4:+61599480 Msa1168780:CDS
CATTTCAGGCACGTTTATAG+GGG 0.562067 7_4:+61599167 Msa1168780:CDS
TTGCACCATTCCTCCTGCAA+CGG 0.567997 7_4:-61598727 None:intergenic
AGTGATGGAATGATGGGTAG+GGG 0.568376 7_4:+61599479 Msa1168780:CDS
GGCATTTGTTGACAACTGGA+TGG 0.569244 7_4:+61599201 Msa1168780:CDS
TTAGGTGGTGTCCTGGAATG+AGG 0.569864 7_4:+61599639 Msa1168780:CDS
ATTGGGAAATCTGGGAGTTG+AGG 0.570713 7_4:-61600515 None:intergenic
TTGAAACTGAGGACTCATCA+AGG 0.572823 7_4:+61599675 Msa1168780:CDS
AAACTTCGAAGAAACGGTAA+AGG 0.575815 7_4:+61599440 Msa1168780:CDS
AACGATGGAAATCCTCCGTA+AGG 0.577357 7_4:-61599398 None:intergenic
GAAAACGGCGATCTTCATGT+TGG 0.577451 7_4:+61599284 Msa1168780:CDS
AGAGTGTGGACCCTCAGCTA+TGG 0.582931 7_4:+61598700 Msa1168780:CDS
CTATGGCATGCCGTTGCAGG+AGG 0.585809 7_4:+61598717 Msa1168780:CDS
CTAATAAGTGATGGAATGAT+GGG 0.591799 7_4:+61599473 Msa1168780:CDS
GCAACGGCATGCCATAGCTG+AGG 0.591988 7_4:-61598711 None:intergenic
GCATGCTCGGCGTGACCCTG+AGG 0.592711 7_4:-61598783 None:intergenic
CATGCTCGGCGTGACCCTGA+GGG 0.593580 7_4:-61598782 None:intergenic
CGTCATGGTCTGATTCTATG+TGG 0.597184 7_4:+61599744 Msa1168780:CDS
GTTTGCATCAGATTGTGTCA+AGG 0.603398 7_4:-61599024 None:intergenic
CGAGCATGAAATGTTCTCAC+TGG 0.604009 7_4:-61600789 None:intergenic
GCATGCCGTTGCAGGAGGAA+TGG 0.606658 7_4:+61598722 Msa1168780:CDS
ATGAAGTGTATGCAAAACTC+AGG 0.607388 7_4:+61598901 Msa1168780:CDS
GATACTATTTCAACTTGCCA+CGG 0.610748 7_4:-61600434 None:intergenic
GCGGTATGAAAGGCGAAAGA+GGG 0.612138 7_4:-61600472 None:intergenic
CAACGGCATGCCATAGCTGA+GGG 0.613865 7_4:-61598710 None:intergenic
TCCTGGAATGAGGTTCAAGA+TGG 0.614384 7_4:+61599649 Msa1168780:CDS
TCTTCATGTTGGAATTCGGA+GGG 0.615735 7_4:+61599295 Msa1168780:CDS
TTTCGCCTTTCATACCGCCA+AGG 0.619271 7_4:+61600477 Msa1168780:CDS
TCTTCCTCTCCCGAAAACGA+TGG 0.620463 7_4:-61599413 None:intergenic
GAACAGCACTTCAGATTAGG+TGG 0.620797 7_4:+61599624 Msa1168780:CDS
GTTATTGAAGCAATAAAACT+CGG 0.633322 7_4:+61599521 Msa1168780:CDS
CCAGATTTCCACCCTAACAA+AGG 0.634082 7_4:-61599347 None:intergenic
CTCTCATCAGATGTACGTGT+CGG 0.637287 7_4:-61600971 None:intergenic
CAAGATGGCCATTGAAACTG+AGG 0.643200 7_4:+61599664 Msa1168780:CDS
AAAGGCGAAAGAGGGATCGA+AGG 0.643435 7_4:-61600464 None:intergenic
GATGGAAATCCTCCGTAAGG+TGG 0.645097 7_4:-61599395 None:intergenic
TTCTATGTGGAGACTTCTCG+AGG 0.645176 7_4:+61599757 Msa1168780:CDS
ATGTGAAAAGAGTGAATCCG+TGG 0.650057 7_4:+61600417 Msa1168780:CDS
CAAACAATACAAGTCGACAC+TGG 0.651728 7_4:+61600887 Msa1168780:CDS
TCTGATGCAAACAATGGTGG+TGG 0.655667 7_4:+61599035 Msa1168780:CDS
CAATGCGAAGAAACATTCGC+AGG 0.655730 7_4:+61601016 Msa1168780:CDS
CATCTGATGAGAGGTTCGAG+TGG 0.680653 7_4:+61600981 Msa1168780:CDS
TGTCCTGCACCACCTTACGG+AGG 0.685773 7_4:+61599386 Msa1168780:CDS
CACATAGAATCAGACCATGA+CGG 0.689130 7_4:-61599743 None:intergenic
CGACACGTACATCTGATGAG+AGG 0.689516 7_4:+61600972 Msa1168780:CDS
ACACAATCTGATGCAAACAA+TGG 0.696099 7_4:+61599029 Msa1168780:CDS
TTTATAGGGGAACACCGAAG+AGG 0.700966 7_4:+61599180 Msa1168780:CDS
CAATCTGATGCAAACAATGG+TGG 0.722659 7_4:+61599032 Msa1168780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAAATTGGAATATT+AGG - chr7_4:61600587-61600606 None:intergenic 10.0%
!!! GTTAGATTTTACTTATATTT+TGG + chr7_4:61599883-61599902 Msa1168780:intron 15.0%
!!! TTTTAGCAAATTCTAATAAT+AGG - chr7_4:61600072-61600091 None:intergenic 15.0%
!! TTAATGTATATATTTGTGTA+TGG + chr7_4:61600177-61600196 Msa1168780:intron 15.0%
!! TAGTAATATATGCAATAAAA+AGG - chr7_4:61600294-61600313 None:intergenic 15.0%
!! ACAATGAAAGAAAAAAGAAA+AGG + chr7_4:61598621-61598640 Msa1168780:CDS 20.0%
!! TCAAGTAAATTAATTCTAGA+GGG - chr7_4:61599806-61599825 None:intergenic 20.0%
!!! GAATGTTTTGAGAATAATAA+CGG + chr7_4:61599843-61599862 Msa1168780:intron 20.0%
!! ATTCAAAGTAAAATATGTGA+AGG - chr7_4:61600139-61600158 None:intergenic 20.0%
!! TATTATTATTAAACGGTTGT+TGG - chr7_4:61600715-61600734 None:intergenic 20.0%
!! GTCGCAATATTATTATTAAA+CGG - chr7_4:61600722-61600741 None:intergenic 20.0%
! AGTTGAAGCAATAAGATATA+TGG + chr7_4:61598863-61598882 Msa1168780:CDS 25.0%
! CTAACTTGGTTAATATTCAT+AGG - chr7_4:61598933-61598952 None:intergenic 25.0%
! CATCATTATCAAAACTAACT+TGG - chr7_4:61598947-61598966 None:intergenic 25.0%
!!! CAAGTTAGTTTTGATAATGA+TGG + chr7_4:61598945-61598964 Msa1168780:CDS 25.0%
! GATAATAAACTTCGAAGAAA+CGG + chr7_4:61599434-61599453 Msa1168780:CDS 25.0%
! GTTATTGAAGCAATAAAACT+CGG + chr7_4:61599521-61599540 Msa1168780:CDS 25.0%
! CTTGTGAAAACTTCTTTAAT+TGG + chr7_4:61599602-61599621 Msa1168780:CDS 25.0%
! CTCAAGTAAATTAATTCTAG+AGG - chr7_4:61599807-61599826 None:intergenic 25.0%
!! TGATTTGTATAAATTCCACA+AGG - chr7_4:61599953-61599972 None:intergenic 25.0%
! AACTTAAAAGGATTATGCTT+TGG - chr7_4:61600022-61600041 None:intergenic 25.0%
!! TTTTCATCAGTACCATAAAT+TGG + chr7_4:61600040-61600059 Msa1168780:intron 25.0%
! GTATGGTAATATAGATACAA+TGG + chr7_4:61600194-61600213 Msa1168780:intron 25.0%
! TCTCTTCTTACAATTTCATT+AGG - chr7_4:61600233-61600252 None:intergenic 25.0%
!!! TTTCTGATGTCATACTTTTT+AGG + chr7_4:61600364-61600383 Msa1168780:intron 25.0%
!!! TCATACTTTTTAGGTTACAT+GGG + chr7_4:61600373-61600392 Msa1168780:intron 25.0%
!!! TTCACATTTTTAAGTATCTC+AGG - chr7_4:61600404-61600423 None:intergenic 25.0%
! TTGGAATATTAGGATTTAGA+AGG - chr7_4:61600577-61600596 None:intergenic 25.0%
!! GTTTCGGGTAAATAAAAAAT+TGG - chr7_4:61600596-61600615 None:intergenic 25.0%
! AAGATTATGAAAATCTGGTA+AGG - chr7_4:61600666-61600685 None:intergenic 25.0%
! AATGGAAGATTATGAAAATC+TGG - chr7_4:61600671-61600690 None:intergenic 25.0%
!! GATTTTCATAATCTTCCATT+AGG + chr7_4:61600671-61600690 Msa1168780:CDS 25.0%
!!! ATGATTAGTCATTTTCTTCT+CGG - chr7_4:61600924-61600943 None:intergenic 25.0%
AAAACATGTGAGTTAACTTC+TGG - chr7_4:61598756-61598775 None:intergenic 30.0%
!!! GTGTTTTTGAGATCTGAAAA+CGG + chr7_4:61599269-61599288 Msa1168780:CDS 30.0%
!! AATGGATTGCTAATAAGTGA+TGG + chr7_4:61599464-61599483 Msa1168780:CDS 30.0%
! CTAATAAGTGATGGAATGAT+GGG + chr7_4:61599473-61599492 Msa1168780:CDS 30.0%
GGATAATAAACCACATCAAA+CGG - chr7_4:61599560-61599579 None:intergenic 30.0%
TTGATGTGGTTTATTATCCT+CGG + chr7_4:61599561-61599580 Msa1168780:intron 30.0%
!! TCAAGGATAAGTTGGTTTAT+CGG + chr7_4:61599692-61599711 Msa1168780:CDS 30.0%
TTGCAAGAATACACATTCTA+TGG - chr7_4:61599987-61600006 None:intergenic 30.0%
!! GGTACTGATGAAAACTTAAA+AGG - chr7_4:61600034-61600053 None:intergenic 30.0%
AATAGGAAGCTTCCAATTTA+TGG - chr7_4:61600055-61600074 None:intergenic 30.0%
! TATGATAGTGATGTAGGTAT+AGG - chr7_4:61600097-61600116 None:intergenic 30.0%
! CTAATGTATGATAGTGATGT+AGG - chr7_4:61600103-61600122 None:intergenic 30.0%
CTACATCACTATCATACATT+AGG + chr7_4:61600101-61600120 Msa1168780:intron 30.0%
TAGATACAATGGAACATTGT+TGG + chr7_4:61600205-61600224 Msa1168780:intron 30.0%
TGACATCAGAAAATCATTCA+CGG - chr7_4:61600356-61600375 None:intergenic 30.0%
!!! GTCATACTTTTTAGGTTACA+TGG + chr7_4:61600372-61600391 Msa1168780:intron 30.0%
TTAGGATTTAGAAGGTTGTT+TGG - chr7_4:61600569-61600588 None:intergenic 30.0%
TTTGCAATGCCAAGTTATTT+GGG - chr7_4:61600760-61600779 None:intergenic 30.0%
! TTTTGCAATGCCAAGTTATT+TGG - chr7_4:61600761-61600780 None:intergenic 30.0%
ACATTAGAGATGAAACATTC+AGG + chr7_4:61601043-61601062 Msa1168780:CDS 30.0%
CAATCCAACTGAGATGAATA+TGG + chr7_4:61598647-61598666 Msa1168780:CDS 35.0%
GAAAAATGTGAACAAGAGTG+TGG + chr7_4:61598686-61598705 Msa1168780:CDS 35.0%
! TGGAATGAAAGACGGAATTT+TGG - chr7_4:61598838-61598857 None:intergenic 35.0%
ACTCTACATGGAATGAAAGA+CGG - chr7_4:61598846-61598865 None:intergenic 35.0%
CTTATTGCTTCAACTCTACA+TGG - chr7_4:61598858-61598877 None:intergenic 35.0%
! GAGTTTTGCATACACTTCAT+CGG - chr7_4:61598901-61598920 None:intergenic 35.0%
ATGAAGTGTATGCAAAACTC+AGG + chr7_4:61598901-61598920 Msa1168780:CDS 35.0%
!! TTTGATAATGATGGTGTTGC+TGG + chr7_4:61598954-61598973 Msa1168780:CDS 35.0%
! CATCAACGTGTCTGAAATTA+AGG + chr7_4:61598977-61598996 Msa1168780:CDS 35.0%
ACACAATCTGATGCAAACAA+TGG + chr7_4:61599029-61599048 Msa1168780:CDS 35.0%
GAAAAATATCCTGAAGAGGA+GGG - chr7_4:61599121-61599140 None:intergenic 35.0%
TTGGGAAAAATATCCTGAAG+AGG - chr7_4:61599125-61599144 None:intergenic 35.0%
! TCTTCAGGATATTTTTCCCA+AGG + chr7_4:61599124-61599143 Msa1168780:CDS 35.0%
! ATTTTTCCCAAGGATGTTCA+TGG + chr7_4:61599134-61599153 Msa1168780:CDS 35.0%
GCTAAAAGGCGAAATAATGT+TGG + chr7_4:61599317-61599336 Msa1168780:CDS 35.0%
AAACTTCGAAGAAACGGTAA+AGG + chr7_4:61599440-61599459 Msa1168780:CDS 35.0%
! GCTAATAAGTGATGGAATGA+TGG + chr7_4:61599472-61599491 Msa1168780:CDS 35.0%
! GAAGTTTTCACAAGAAACTC+AGG - chr7_4:61599596-61599615 None:intergenic 35.0%
TTGTCATATAGCAGCTATAG+TGG + chr7_4:61599912-61599931 Msa1168780:intron 35.0%
GATACTATTTCAACTTGCCA+CGG - chr7_4:61600437-61600456 None:intergenic 35.0%
AATCTCAATTTCTTCCTTGG+CGG - chr7_4:61600494-61600513 None:intergenic 35.0%
GGTAATCTCAATTTCTTCCT+TGG - chr7_4:61600497-61600516 None:intergenic 35.0%
TTGGAAATTGGCCATCAATT+GGG - chr7_4:61600535-61600554 None:intergenic 35.0%
ATTGGAAATTGGCCATCAAT+TGG - chr7_4:61600536-61600555 None:intergenic 35.0%
! GAAAAGTTGGCATTGGAAAT+TGG - chr7_4:61600547-61600566 None:intergenic 35.0%
TTGTTTGGAAAAGTTGGCAT+TGG - chr7_4:61600554-61600573 None:intergenic 35.0%
AGAAGGTTGTTTGGAAAAGT+TGG - chr7_4:61600560-61600579 None:intergenic 35.0%
TTAAACGGTTGTTGGAAACT+AGG - chr7_4:61600707-61600726 None:intergenic 35.0%
! AAGTTATTTGGGACAGTCAT+CGG - chr7_4:61600749-61600768 None:intergenic 35.0%
GACTCCATATTCATCTCAGT+TGG - chr7_4:61598654-61598673 None:intergenic 40.0%
! ACATGTTTTCTACTTCCCTC+AGG + chr7_4:61598767-61598786 Msa1168780:CDS 40.0%
! CATGTTTTCTACTTCCCTCA+GGG + chr7_4:61598768-61598787 Msa1168780:CDS 40.0%
!! GAGTAAGCACTGAAATTCAC+CGG - chr7_4:61598816-61598835 None:intergenic 40.0%
GTTTGCATCAGATTGTGTCA+AGG - chr7_4:61599027-61599046 None:intergenic 40.0%
CAATCTGATGCAAACAATGG+TGG + chr7_4:61599032-61599051 Msa1168780:CDS 40.0%
AGCGTTTCTGCACAATATCT+AGG - chr7_4:61599071-61599090 None:intergenic 40.0%
!!! AGAAACGCTTTTTCCTCGTT+TGG + chr7_4:61599082-61599101 Msa1168780:intron 40.0%
TTAGCTGAATAGTCCAAACG+AGG - chr7_4:61599098-61599117 None:intergenic 40.0%
GGAAAAATATCCTGAAGAGG+AGG - chr7_4:61599122-61599141 None:intergenic 40.0%
! TTTTCGCCATGAACATCCTT+GGG - chr7_4:61599143-61599162 None:intergenic 40.0%
GCATTTCAGGCACGTTTATA+GGG + chr7_4:61599166-61599185 Msa1168780:CDS 40.0%
CATTTCAGGCACGTTTATAG+GGG + chr7_4:61599167-61599186 Msa1168780:CDS 40.0%
GTTGTCAACAAATGCCTCTT+CGG - chr7_4:61599197-61599216 None:intergenic 40.0%
!! AAGAGGCATTTGTTGACAAC+TGG + chr7_4:61599197-61599216 Msa1168780:CDS 40.0%
AGTTTCTTGTCGCTGACAAA+AGG - chr7_4:61599230-61599249 None:intergenic 40.0%
GCGATCTTCATGTTGGAATT+CGG + chr7_4:61599291-61599310 Msa1168780:CDS 40.0%
ATCTTCATGTTGGAATTCGG+AGG + chr7_4:61599294-61599313 Msa1168780:CDS 40.0%
TCTTCATGTTGGAATTCGGA+GGG + chr7_4:61599295-61599314 Msa1168780:CDS 40.0%
TTGGAGTCGATCCTTTGTTA+GGG + chr7_4:61599336-61599355 Msa1168780:CDS 40.0%
!! TGGAAATCTGGTAGTGGAAT+TGG + chr7_4:61599359-61599378 Msa1168780:intron 40.0%
CGAAGAAACGGTAAAGGTAA+TGG + chr7_4:61599446-61599465 Msa1168780:CDS 40.0%
!! TAAGTGATGGAATGATGGGT+AGG + chr7_4:61599477-61599496 Msa1168780:CDS 40.0%
!! AAGTGATGGAATGATGGGTA+GGG + chr7_4:61599478-61599497 Msa1168780:CDS 40.0%
TAATATGCAGCCGTTTGATG+TGG + chr7_4:61599547-61599566 Msa1168780:intron 40.0%
TTGGAACAGCACTTCAGATT+AGG + chr7_4:61599621-61599640 Msa1168780:CDS 40.0%
TGATGAGTCCTCAGTTTCAA+TGG - chr7_4:61599675-61599694 None:intergenic 40.0%
TTGAAACTGAGGACTCATCA+AGG + chr7_4:61599675-61599694 Msa1168780:CDS 40.0%
AGGACTCATCAAGGATAAGT+TGG + chr7_4:61599684-61599703 Msa1168780:CDS 40.0%
CACATAGAATCAGACCATGA+CGG - chr7_4:61599746-61599765 None:intergenic 40.0%
CACTATATTGCTATGCCTTG+TGG + chr7_4:61599935-61599954 Msa1168780:intron 40.0%
TAAAATATGTGAAGGCCCTC+GGG - chr7_4:61600131-61600150 None:intergenic 40.0%
GTAAAATATGTGAAGGCCCT+CGG - chr7_4:61600132-61600151 None:intergenic 40.0%
ATCATTCACGGCTGAAACAA+AGG - chr7_4:61600344-61600363 None:intergenic 40.0%
ATGTGAAAAGAGTGAATCCG+TGG + chr7_4:61600417-61600436 Msa1168780:CDS 40.0%
GATGACTGTCCCAAATAACT+TGG + chr7_4:61600748-61600767 Msa1168780:CDS 40.0%
GAAATGTTCTCACTGGTGTT+CGG - chr7_4:61600785-61600804 None:intergenic 40.0%
TGCACAATCTTCAGAGAAAC+CGG + chr7_4:61600829-61600848 Msa1168780:CDS 40.0%
! TTTGGCCAAAAAGCACAAGT+TGG - chr7_4:61600871-61600890 None:intergenic 40.0%
!! CAGTGTCGACTTGTATTGTT+TGG - chr7_4:61600889-61600908 None:intergenic 40.0%
CAAACAATACAAGTCGACAC+TGG + chr7_4:61600887-61600906 Msa1168780:CDS 40.0%
TCTGATGCAAACAATGGTGG+TGG + chr7_4:61599035-61599054 Msa1168780:CDS 45.0%
! CTTTTCGCCATGAACATCCT+TGG - chr7_4:61599144-61599163 None:intergenic 45.0%
AGGATGTTCATGGCGAAAAG+TGG + chr7_4:61599144-61599163 Msa1168780:CDS 45.0%
ATGGCGAAAAGTGGCATTTC+AGG + chr7_4:61599153-61599172 Msa1168780:CDS 45.0%
GGCATTTCAGGCACGTTTAT+AGG + chr7_4:61599165-61599184 Msa1168780:CDS 45.0%
TTTATAGGGGAACACCGAAG+AGG + chr7_4:61599180-61599199 Msa1168780:CDS 45.0%
! GGCATTTGTTGACAACTGGA+TGG + chr7_4:61599201-61599220 Msa1168780:CDS 45.0%
GAAAACGGCGATCTTCATGT+TGG + chr7_4:61599284-61599303 Msa1168780:CDS 45.0%
TTGGAATTCGGAGGGCTAAA+AGG + chr7_4:61599303-61599322 Msa1168780:CDS 45.0%
GTTGGAGTCGATCCTTTGTT+AGG + chr7_4:61599335-61599354 Msa1168780:CDS 45.0%
CCAGATTTCCACCCTAACAA+AGG - chr7_4:61599350-61599369 None:intergenic 45.0%
CCTTTGTTAGGGTGGAAATC+TGG + chr7_4:61599347-61599366 Msa1168780:intron 45.0%
TTAGGGTGGAAATCTGGTAG+TGG + chr7_4:61599353-61599372 Msa1168780:intron 45.0%
ATTTGTCCTGCACCACCTTA+CGG + chr7_4:61599383-61599402 Msa1168780:CDS 45.0%
AACGATGGAAATCCTCCGTA+AGG - chr7_4:61599401-61599420 None:intergenic 45.0%
! CGGAGGATTTCCATCGTTTT+CGG + chr7_4:61599403-61599422 Msa1168780:CDS 45.0%
! GGAGGATTTCCATCGTTTTC+GGG + chr7_4:61599404-61599423 Msa1168780:CDS 45.0%
!! ATTTCCATCGTTTTCGGGAG+AGG + chr7_4:61599409-61599428 Msa1168780:CDS 45.0%
!! AGTGATGGAATGATGGGTAG+GGG + chr7_4:61599479-61599498 Msa1168780:CDS 45.0%
GTGGTTTATTATCCTCGGTC+AGG + chr7_4:61599566-61599585 Msa1168780:intron 45.0%
GAACAGCACTTCAGATTAGG+TGG + chr7_4:61599624-61599643 Msa1168780:CDS 45.0%
TCCTGGAATGAGGTTCAAGA+TGG + chr7_4:61599649-61599668 Msa1168780:CDS 45.0%
CAAGATGGCCATTGAAACTG+AGG + chr7_4:61599664-61599683 Msa1168780:CDS 45.0%
CGGAACTATTGCTTCTGTTC+AGG + chr7_4:61599712-61599731 Msa1168780:CDS 45.0%
CGTCATGGTCTGATTCTATG+TGG + chr7_4:61599744-61599763 Msa1168780:CDS 45.0%
TTCTATGTGGAGACTTCTCG+AGG + chr7_4:61599757-61599776 Msa1168780:CDS 45.0%
TCATACATTAGGTATCCCCG+AGG + chr7_4:61600112-61600131 Msa1168780:intron 45.0%
CATACATTAGGTATCCCCGA+GGG + chr7_4:61600113-61600132 Msa1168780:intron 45.0%
AAAATATGTGAAGGCCCTCG+GGG - chr7_4:61600130-61600149 None:intergenic 45.0%
TTCTTCCTTGGCGGTATGAA+AGG - chr7_4:61600485-61600504 None:intergenic 45.0%
ATTGGGAAATCTGGGAGTTG+AGG - chr7_4:61600518-61600537 None:intergenic 45.0%
CTCCCAGATTTCCCAATTGA+TGG + chr7_4:61600521-61600540 Msa1168780:CDS 45.0%
GGCCATCAATTGGGAAATCT+GGG - chr7_4:61600526-61600545 None:intergenic 45.0%
TGGCCATCAATTGGGAAATC+TGG - chr7_4:61600527-61600546 None:intergenic 45.0%
CTAGGCTGAAAGAGACCTAA+TGG - chr7_4:61600689-61600708 None:intergenic 45.0%
CGAGCATGAAATGTTCTCAC+TGG - chr7_4:61600792-61600811 None:intergenic 45.0%
!! CCAAAAAGCACAAGTTGGTG+CGG - chr7_4:61600866-61600885 None:intergenic 45.0%
CTCTCATCAGATGTACGTGT+CGG - chr7_4:61600974-61600993 None:intergenic 45.0%
CTGCGAATGTTTCTTCGCAT+TGG - chr7_4:61601018-61601037 None:intergenic 45.0%
CAATGCGAAGAAACATTCGC+AGG + chr7_4:61601016-61601035 Msa1168780:CDS 45.0%
TTGCACCATTCCTCCTGCAA+CGG - chr7_4:61598730-61598749 None:intergenic 50.0%
TTCAGCTAACCCTCCTCTTC+AGG + chr7_4:61599109-61599128 Msa1168780:intron 50.0%
AGCGACAAGAAACTTGCGTC+TGG + chr7_4:61599236-61599255 Msa1168780:CDS 50.0%
GCGACAAGAAACTTGCGTCT+GGG + chr7_4:61599237-61599256 Msa1168780:CDS 50.0%
CGACAAGAAACTTGCGTCTG+GGG + chr7_4:61599238-61599257 Msa1168780:CDS 50.0%
GAGTCGATCCTTTGTTAGGG+TGG + chr7_4:61599339-61599358 Msa1168780:intron 50.0%
GATGGAAATCCTCCGTAAGG+TGG - chr7_4:61599398-61599417 None:intergenic 50.0%
TCTTCCTCTCCCGAAAACGA+TGG - chr7_4:61599416-61599435 None:intergenic 50.0%
!! GTGATGGAATGATGGGTAGG+GGG + chr7_4:61599480-61599499 Msa1168780:CDS 50.0%
CTTCAGATTAGGTGGTGTCC+TGG + chr7_4:61599632-61599651 Msa1168780:CDS 50.0%
TTAGGTGGTGTCCTGGAATG+AGG + chr7_4:61599639-61599658 Msa1168780:CDS 50.0%
GCCATCTTGAACCTCATTCC+AGG - chr7_4:61599653-61599672 None:intergenic 50.0%
AAAGGCGAAAGAGGGATCGA+AGG - chr7_4:61600467-61600486 None:intergenic 50.0%
GCGGTATGAAAGGCGAAAGA+GGG - chr7_4:61600475-61600494 None:intergenic 50.0%
TTTCGCCTTTCATACCGCCA+AGG + chr7_4:61600477-61600496 Msa1168780:CDS 50.0%
TTACCCGAAACTAGTCCTGC+CGG + chr7_4:61600605-61600624 Msa1168780:CDS 50.0%
AAGACCGAAATGACCATGCC+TGG - chr7_4:61600642-61600661 None:intergenic 50.0%
! CCGCACCAACTTGTGCTTTT+TGG + chr7_4:61600863-61600882 Msa1168780:CDS 50.0%
CGACACGTACATCTGATGAG+AGG + chr7_4:61600972-61600991 Msa1168780:CDS 50.0%
CATCTGATGAGAGGTTCGAG+TGG + chr7_4:61600981-61601000 Msa1168780:CDS 50.0%
AGAGTGTGGACCCTCAGCTA+TGG + chr7_4:61598700-61598719 Msa1168780:CDS 55.0%
CAACGGCATGCCATAGCTGA+GGG - chr7_4:61598713-61598732 None:intergenic 55.0%
!! CACCGGTTCACATGCATGCT+CGG - chr7_4:61598799-61598818 None:intergenic 55.0%
AATCCTCCGTAAGGTGGTGC+AGG - chr7_4:61599392-61599411 None:intergenic 55.0%
!! TGGAATGATGGGTAGGGGGA+AGG + chr7_4:61599484-61599503 Msa1168780:CDS 55.0%
!! AACTCAGGAGTACCTGACCG+AGG - chr7_4:61599581-61599600 None:intergenic 55.0%
TTCAGGCTGCTGATCCGTCA+TGG + chr7_4:61599729-61599748 Msa1168780:CDS 55.0%
GGCGGTATGAAAGGCGAAAG+AGG - chr7_4:61600476-61600495 None:intergenic 55.0%
!! ATGCCGGCAGGACTAGTTTC+GGG - chr7_4:61600611-61600630 None:intergenic 55.0%
!! CATGCCGGCAGGACTAGTTT+CGG - chr7_4:61600612-61600631 None:intergenic 55.0%
GGAGCCAGGCATGGTCATTT+CGG + chr7_4:61600635-61600654 Msa1168780:CDS 55.0%
TGGTGCGGCTTTGCATGATC+CGG - chr7_4:61600851-61600870 None:intergenic 55.0%
! CATCAGATGTACGTGTCGGC+AGG - chr7_4:61600970-61600989 None:intergenic 55.0%
GCAACGGCATGCCATAGCTG+AGG - chr7_4:61598714-61598733 None:intergenic 60.0%
CAGCTATGGCATGCCGTTGC+AGG + chr7_4:61598714-61598733 Msa1168780:CDS 60.0%
CTATGGCATGCCGTTGCAGG+AGG + chr7_4:61598717-61598736 Msa1168780:CDS 60.0%
GCATGCCGTTGCAGGAGGAA+TGG + chr7_4:61598722-61598741 Msa1168780:CDS 60.0%
CGCCGAGCATGCATGTGAAC+CGG + chr7_4:61598794-61598813 Msa1168780:CDS 60.0%
TGTCCTGCACCACCTTACGG+AGG + chr7_4:61599386-61599405 Msa1168780:CDS 60.0%
AACTAGTCCTGCCGGCATGC+AGG + chr7_4:61600613-61600632 Msa1168780:CDS 60.0%
ACTAGTCCTGCCGGCATGCA+GGG + chr7_4:61600614-61600633 Msa1168780:CDS 60.0%
CATGCTCGGCGTGACCCTGA+GGG - chr7_4:61598785-61598804 None:intergenic 65.0%
ATGCCTGGCTCCCTGCATGC+CGG - chr7_4:61600627-61600646 None:intergenic 65.0%
GCATGCTCGGCGTGACCCTG+AGG - chr7_4:61598786-61598805 None:intergenic 70.0%
GGCATGCAGGGAGCCAGGCA+TGG + chr7_4:61600626-61600645 Msa1168780:CDS 70.0%
CTGGCTCCCTGCATGCCGGC+AGG - chr7_4:61600623-61600642 None:intergenic 75.0%
CTGCCGGCATGCAGGGAGCC+AGG + chr7_4:61600621-61600640 Msa1168780:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 61598615 61601078 61598615 ID=Msa1168780;Name=Msa1168780
chr7_4 mRNA 61598615 61601078 61598615 ID=Msa1168780-mRNA-1;Parent=Msa1168780;Name=Msa1168780-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|0.2|0.16|6|0|587
chr7_4 exon 61598615 61598844 61598615 ID=Msa1168780-mRNA-1:exon:19462;Parent=Msa1168780-mRNA-1
chr7_4 exon 61598863 61599098 61598863 ID=Msa1168780-mRNA-1:exon:19463;Parent=Msa1168780-mRNA-1
chr7_4 exon 61599114 61599357 61599114 ID=Msa1168780-mRNA-1:exon:19464;Parent=Msa1168780-mRNA-1
chr7_4 exon 61599373 61599542 61599373 ID=Msa1168780-mRNA-1:exon:19465;Parent=Msa1168780-mRNA-1
chr7_4 exon 61599588 61599778 61599588 ID=Msa1168780-mRNA-1:exon:19466;Parent=Msa1168780-mRNA-1
chr7_4 exon 61600386 61601078 61600386 ID=Msa1168780-mRNA-1:exon:19467;Parent=Msa1168780-mRNA-1
chr7_4 CDS 61598615 61598844 61598615 ID=Msa1168780-mRNA-1:cds;Parent=Msa1168780-mRNA-1
chr7_4 CDS 61598863 61599098 61598863 ID=Msa1168780-mRNA-1:cds;Parent=Msa1168780-mRNA-1
chr7_4 CDS 61599114 61599357 61599114 ID=Msa1168780-mRNA-1:cds;Parent=Msa1168780-mRNA-1
chr7_4 CDS 61599373 61599542 61599373 ID=Msa1168780-mRNA-1:cds;Parent=Msa1168780-mRNA-1
chr7_4 CDS 61599588 61599778 61599588 ID=Msa1168780-mRNA-1:cds;Parent=Msa1168780-mRNA-1
chr7_4 CDS 61600386 61601078 61600386 ID=Msa1168780-mRNA-1:cds;Parent=Msa1168780-mRNA-1
Gene Sequence

>Msa1168780

GAATTGACAATGAAAGAAAAAAGAAAAGGTTGCAATCCAACTGAGATGAATATGGAGTCAAACAAGAAATTGAAAAATGTGAACAAGAGTGTGGACCCTCAGCTATGGCATGCCGTTGCAGGAGGAATGGTGCAAATGCCAGAAGTTAACTCACATGTTTTCTACTTCCCTCAGGGTCACGCCGAGCATGCATGTGAACCGGTGAATTTCAGTGCTTACTCCAAAATTCCAGTTGAAGCAATAAGATATATGGCTAATCATGAGACCGATGAAGTGTATGCAAAACTCAGGCTTGTTCCTATGAATATTAACCAAGTTAGTTTTGATAATGATGGTGTTGCTGGCATCAACGTGTCTGAAATTAAGGATAAACATCAATCTTTTGCGAAAACCTTGACACAATCTGATGCAAACAATGGTGGTGGCTTTTCTTGTCCTAGATATTGTGCAGAAACGCTTTTTCCTCCTAACCCTCCTCTTCAGGATATTTTTCCCAAGGATGTTCATGGCGAAAAGTGGCATTTCAGGCACGTTTATAGGGGAACACCGAAGAGGCATTTGTTGACAACTGGATGGAGTCCTTTTGTCAGCGACAAGAAACTTGCGTCTGGGGATTCGATTGTGTTTTTGAGATCTGAAAACGGCGATCTTCATGTTGGAATTCGGAGGGCTAAAAGGCGAAATAATGTTGGAGTCGATCCTTTGTTAGGTGGAATTGGAATTTGTCCTGCACCACCTTACGGAGGATTTCCATCGTTTTCGGGAGAGGAAGATAATAAACTTCGAAGAAACGGTAAAGGTAATGGATTGCTAATAAGTGATGGAATGATGGGTAGGGGGAAGGTGAAAGCTCTAGAAGTTATTGAAGCAATAAAACTCGGTACTCCTGAGTTTCTTGTGAAAACTTCTTTAATTGGAACAGCACTTCAGATTAGGTGGTGTCCTGGAATGAGGTTCAAGATGGCCATTGAAACTGAGGACTCATCAAGGATAAGTTGGTTTATCGGAACTATTGCTTCTGTTCAGGCTGCTGATCCGTCATGGTCTGATTCTATGTGGAGACTTCTCGAGGTTACATGGGATGAACCTGAGATACTTAAAAATGTGAAAAGAGTGAATCCGTGGCAAGTTGAAATAGTATCGAACATGCCTTCGATCCCTCTTTCGCCTTTCATACCGCCAAGGAAGAAATTGAGATTACCTCAACTCCCAGATTTCCCAATTGATGGCCAATTTCCAATGCCAACTTTTCCAAACAACCTTCTAAATCCTAATATTCCAATTTTTTATTTACCCGAAACTAGTCCTGCCGGCATGCAGGGAGCCAGGCATGGTCATTTCGGTCTTACCTTACCAGATTTTCATAATCTTCCATTAGGTCTCTTTCAGCCTAGTTTCCAACAACCGTTTAATAATAATATTGCGACGATGCCGATGACTGTCCCAAATAACTTGGCATTGCAAAAGCCGAACACCAGTGAGAACATTTCATGCTCGCATTCGATATCAACTTCTGCACAATCTTCAGAGAAACCGGATCATGCAAAGCCGCACCAACTTGTGCTTTTTGGCCAAACAATACAAGTCGACACTGGAAATGAGAATTCCGAGAAGAAAATGACTAATCATTTGTCTGATTTTCATCTACAAAGCCTGCCGACACGTACATCTGATGAGAGGTTCGAGTGGAATGCTAAGAACCAATGCGAAGAAACATTCGCAGGAGAAACATTAGAGATGAAACATTCAGGTAAGAATGAATAA
Protein sequence

>Msa1168780

ELTMKEKRKGCNPTEMNMESNKKLKNVNKSVDPQLWHAVAGGMVQMPEVNSHVFYFPQGHAEHACEPVNFSAYSKIPVEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSEIKDKHQSFAKTLTQSDANNGGGFSCPRYCAETLFPPNPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLLGGIGICPAPPYGGFPSFSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAIKLGTPEFLVKTSLIGTALQIRWCPGMRFKMAIETEDSSRISWFIGTIASVQAADPSWSDSMWRLLEVTWDEPEILKNVKRVNPWQVEIVSNMPSIPLSPFIPPRKKLRLPQLPDFPIDGQFPMPTFPNNLLNPNIPIFYLPETSPAGMQGARHGHFGLTLPDFHNLPLGLFQPSFQQPFNNNIATMPMTVPNNLALQKPNTSENISCSHSISTSAQSSEKPDHAKPHQLVLFGQTIQVDTGNENSEKKMTNHLSDFHLQSLPTRTSDERFEWNAKNQCEETFAGETLEMKHSGKNE*