AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1168850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1168850 MtrunA17_Chr7g0264171 90.081 615 29 5 4 587 1 614 0.0 1128
Msa1168850 MtrunA17_Chr1g0181211 53.277 595 224 15 25 574 18 603 0.0 552
Msa1168850 MtrunA17_Chr7g0264161 71.637 342 30 5 43 358 1 301 6.01e-165 471
Msa1168850 MtrunA17_Chr2g0326761 49.907 537 224 13 24 527 1 525 1.34e-163 483
Msa1168850 MtrunA17_Chr4g0028971 50.746 536 218 12 31 527 9 537 3.90e-158 469
Msa1168850 MtrunA17_Chr1g0199681 45.763 590 210 21 25 538 85 640 6.57e-145 435
Msa1168850 MtrunA17_Chr3g0115271 40.820 512 246 19 30 509 15 501 7.54e-106 330
Msa1168850 MtrunA17_Chr5g0424931 37.721 509 214 19 29 485 14 471 2.63e-83 270
Msa1168850 MtrunA17_Chr5g0417281 32.731 553 254 20 29 528 6 493 3.44e-73 243
Msa1168850 MtrunA17_Chr5g0436761 35.071 422 201 13 29 424 7 381 2.82e-66 223
Msa1168850 MtrunA17_Chr1g0156321 32.957 443 228 12 27 434 36 444 2.33e-62 221
Msa1168850 MtrunA17_Chr2g0282961 36.066 366 190 6 30 378 49 387 1.27e-61 214
Msa1168850 MtrunA17_Chr4g0046371 35.849 371 188 10 30 378 34 376 1.83e-60 213
Msa1168850 MtrunA17_Chr4g0070181 33.666 401 206 11 29 407 18 380 9.61e-60 215
Msa1168850 MtrunA17_Chr2g0301251 35.580 371 189 9 29 380 18 357 1.98e-59 214
Msa1168850 MtrunA17_Chr2g0285461 34.673 398 209 11 29 406 18 384 5.56e-59 211
Msa1168850 MtrunA17_Chr1g0178011 33.014 418 221 11 29 427 7 384 7.84e-59 203
Msa1168850 MtrunA17_Chr2g0276781 34.474 409 210 11 26 412 15 387 4.24e-58 206
Msa1168850 MtrunA17_Chr2g0289221 34.595 370 135 10 31 358 17 321 1.28e-57 197
Msa1168850 MtrunA17_Chr5g0433301 34.828 379 197 10 29 387 19 367 2.83e-57 206
Msa1168850 MtrunA17_Chr8g0376771 34.171 398 210 11 29 406 18 383 5.48e-57 206
Msa1168850 MtrunA17_Chr4g0009751 34.264 394 207 10 32 405 17 378 1.61e-56 201
Msa1168850 MtrunA17_Chr3g0109391 34.737 380 196 11 29 387 21 369 2.61e-56 203
Msa1168850 MtrunA17_Chr2g0277461 33.673 392 196 14 31 402 10 357 4.07e-56 196
Msa1168850 MtrunA17_Chr8g0385791 34.750 400 196 13 34 407 59 419 9.56e-56 202
Msa1168850 MtrunA17_Chr7g0239061 33.842 393 207 11 34 406 14 373 1.18e-55 199
Msa1168850 MtrunA17_Chr2g0326281 34.321 405 198 12 34 399 56 431 1.07e-53 196
Msa1168850 MtrunA17_Chr4g0029671 35.038 391 196 10 34 397 54 413 1.38e-53 195
Msa1168850 MtrunA17_Chr8g0346711 34.103 390 206 9 28 399 23 379 1.45e-53 193
Msa1168850 MtrunA17_Chr8g0389081 34.677 372 191 11 31 381 29 369 2.27e-52 193
Msa1168850 MtrunA17_Chr5g0417211 33.071 381 176 11 31 386 9 335 4.87e-50 178
Msa1168850 MtrunA17_Chr2g0277531 32.267 344 175 13 31 358 17 318 6.30e-40 148
Msa1168850 MtrunA17_Chr5g0425261 29.973 377 198 11 31 385 9 341 1.06e-38 146
Msa1168850 MtrunA17_Chr5g0424801 29.380 371 197 10 31 379 9 336 5.40e-38 144
Msa1168850 MtrunA17_Chr5g0424741 28.175 504 241 20 29 448 7 473 2.94e-37 145
Msa1168850 MtrunA17_Chr5g0425661 34.951 206 97 7 30 211 33 225 3.62e-32 124
Msa1168850 MtrunA17_Chr8g0356211 28.754 313 146 13 136 426 2 259 5.69e-25 105
Msa1168850 MtrunA17_Chr5g0425651 35.652 115 64 4 281 387 9 121 1.56e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1168850 AT2G28350.2 44.724 597 256 18 29 572 5 580 3.36e-147 440
Msa1168850 AT2G28350.1 44.724 597 256 18 29 572 5 580 5.10e-147 441
Msa1168850 AT4G30080.1 52.043 465 179 10 29 459 14 468 1.31e-146 439
Msa1168850 AT1G77850.1 37.662 539 293 13 28 535 13 539 9.26e-102 320
Msa1168850 AT1G77850.2 37.662 539 293 13 28 535 13 539 1.14e-101 320
Msa1168850 AT1G19220.1 35.250 400 208 10 29 409 18 385 4.83e-61 219
Msa1168850 AT1G30330.3 34.360 422 222 12 4 406 1 386 4.01e-60 215
Msa1168850 AT1G30330.2 34.360 422 222 12 4 406 1 386 4.01e-60 215
Msa1168850 AT1G30330.1 35.013 397 209 11 29 406 18 384 2.75e-59 213
Msa1168850 AT1G19850.2 34.794 388 193 11 18 378 23 377 3.02e-59 213
Msa1168850 AT1G19850.1 34.794 388 193 11 18 378 34 388 3.93e-59 212
Msa1168850 AT5G60450.2 33.417 398 209 11 25 396 32 399 6.23e-58 207
Msa1168850 AT5G62000.2 33.258 445 210 13 1 397 5 410 6.76e-58 208
Msa1168850 AT5G62000.5 33.258 445 210 13 1 397 5 410 6.76e-58 208
Msa1168850 AT5G62000.3 33.258 445 210 13 1 397 5 410 6.76e-58 208
Msa1168850 AT5G62000.1 33.258 445 210 13 1 397 5 410 6.76e-58 208
Msa1168850 AT1G59750.4 33.002 503 268 17 34 508 22 483 9.72e-58 205
Msa1168850 AT1G59750.1 32.871 505 271 18 34 508 22 488 9.88e-58 205
Msa1168850 AT1G59750.3 32.871 505 271 18 34 508 22 488 9.88e-58 205
Msa1168850 AT5G62000.4 33.258 445 210 13 1 397 5 410 1.01e-57 208
Msa1168850 AT5G37020.2 34.737 380 196 11 29 387 17 365 1.66e-57 206
Msa1168850 AT1G59750.2 33.202 506 265 19 34 508 22 485 3.13e-57 204
Msa1168850 AT5G37020.1 34.737 380 196 11 29 387 17 365 3.37e-57 206
Msa1168850 AT5G60450.1 33.676 389 202 11 34 396 65 423 4.27e-57 205
Msa1168850 AT5G20730.2 33.000 400 217 10 29 409 19 386 1.21e-56 206
Msa1168850 AT4G23980.2 32.061 393 217 8 34 408 12 372 1.62e-55 199
Msa1168850 AT4G23980.1 32.808 381 206 8 34 396 12 360 1.66e-55 199
Msa1168850 AT2G33860.1 32.584 445 235 16 34 447 54 464 4.46e-55 197
Msa1168850 AT3G61830.1 32.117 411 217 10 34 423 25 394 1.91e-52 189
Msa1168850 AT2G46530.1 33.060 366 188 11 34 378 21 350 2.28e-51 186
Msa1168850 AT2G46530.3 33.060 366 188 11 34 378 42 371 4.65e-51 186
Msa1168850 AT1G35520.1 33.162 389 206 10 34 406 27 377 3.73e-49 180
Msa1168850 AT1G35240.1 31.807 393 206 10 34 406 27 377 3.75e-49 180
Msa1168850 AT1G34310.1 32.727 385 207 11 31 399 24 372 5.51e-48 177
Msa1168850 AT1G35540.1 32.190 379 206 8 34 396 27 370 6.93e-48 177
Msa1168850 AT1G34410.1 31.830 399 198 11 34 406 27 377 1.54e-47 176
Msa1168850 AT5G20730.3 41.475 217 105 5 29 227 19 231 6.40e-46 174
Msa1168850 AT5G20730.1 41.475 217 105 5 29 227 19 231 8.93e-46 174
Msa1168850 AT1G34390.1 31.152 382 209 9 34 399 27 370 8.56e-45 168
Msa1168850 AT1G34170.1 30.749 387 211 11 12 378 3 352 4.42e-44 164
Msa1168850 AT3G61830.2 31.818 352 190 8 81 423 33 343 6.59e-43 162
Msa1168850 AT5G37020.3 36.330 267 136 7 128 387 31 270 2.20e-42 162
Msa1168850 AT2G33860.2 33.036 336 179 11 128 447 2 307 7.57e-42 157
Msa1168850 AT1G34170.2 30.233 387 187 12 12 378 3 326 4.24e-39 150
Msa1168850 AT1G34170.3 30.233 387 187 12 12 378 3 326 1.81e-38 149
Msa1168850 AT2G46530.2 33.721 258 135 7 127 378 36 263 5.02e-37 144
Msa1168850 AT1G43950.1 35.610 205 107 8 34 222 27 222 3.33e-28 113
Msa1168850 ATMG00940.1 32.000 150 94 3 210 353 1 148 1.11e-15 75.5
Msa1168850 AT1G13260.1 30.657 137 87 4 115 243 175 311 5.31e-11 65.1

Find 138 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAAGTTGGCATTGGAAAT+TGG 0.228346 7_4:-61734055 None:intergenic
TGGAATGAAAGACGGAATTT+TGG 0.237258 7_4:-61732346 None:intergenic
CATCAACGTGTCTGAAATTA+AGG 0.241218 7_4:+61732488 Msa1168850:CDS
TGGCCATCAATTGGGAAATC+TGG 0.249420 7_4:-61734035 None:intergenic
GGCATTTCAGGCACGTTTAT+AGG 0.250063 7_4:+61732676 Msa1168850:CDS
GCATTTCAGGCACGTTTATA+GGG 0.272489 7_4:+61732677 Msa1168850:CDS
CTTGTGAAAACTTCTTTAAT+TGG 0.278075 7_4:+61733113 Msa1168850:CDS
CAGCTATGGCATGCCGTTGC+AGG 0.280375 7_4:+61732225 Msa1168850:CDS
ATGGCGAAAAGTGGCATTTC+AGG 0.309403 7_4:+61732664 Msa1168850:CDS
CGGAACTATTGCTTCTGTTC+AGG 0.311558 7_4:+61733223 Msa1168850:CDS
GTTGGAGTCGATCCTTTGTT+AGG 0.313766 7_4:+61732846 Msa1168850:CDS
CTCCCAGATTTCCCAATTGA+TGG 0.331554 7_4:+61734032 Msa1168850:CDS
TTAGGATTTAGAAGGTTGTT+TGG 0.339574 7_4:-61734077 None:intergenic
TTCAGCTAACCCTCCTCTTC+AGG 0.348707 7_4:+61732620 Msa1168850:intron
TTGGAATATTAGGATTTAGA+AGG 0.349891 7_4:-61734085 None:intergenic
TTGGAATTCGGAGGGCTAAA+AGG 0.350812 7_4:+61732814 Msa1168850:CDS
TATTATTATTAAACGGTTGT+TGG 0.355810 7_4:-61734223 None:intergenic
ATTGGAAATTGGCCATCAAT+TGG 0.356580 7_4:-61734044 None:intergenic
CATGCCGGCAGGACTAGTTT+CGG 0.360765 7_4:-61734120 None:intergenic
AGAAGGTTGTTTGGAAAAGT+TGG 0.365277 7_4:-61734068 None:intergenic
TGGAAATCTGGTAGTGGAAT+TGG 0.365957 7_4:+61732870 Msa1168850:intron
CTGCGAATGTTTCTTCGCAT+TGG 0.366575 7_4:-61734526 None:intergenic
CAGTGTCGACTTGTATTGTT+TGG 0.368403 7_4:-61734397 None:intergenic
AATGGAAGATTATGAAAATC+TGG 0.372719 7_4:-61734179 None:intergenic
TTTGCAATGCCAAGTTATTA+GGG 0.373972 7_4:-61734268 None:intergenic
TCAAGGATAAGTTGGTTTAT+CGG 0.374081 7_4:+61733203 Msa1168850:CDS
GGAGCCAGGCATGGTCATTT+CGG 0.375741 7_4:+61734146 Msa1168850:CDS
TTTGATAATGATGGTGTTGC+TGG 0.376636 7_4:+61732465 Msa1168850:CDS
CTAACTTGGTTAATATTCAT+AGG 0.385591 7_4:-61732441 None:intergenic
AAGAGGCATTTGTTGACAAC+TGG 0.392584 7_4:+61732708 Msa1168850:CDS
GGTAATCTCAATTTCTTCCT+TGG 0.395833 7_4:-61734005 None:intergenic
TTGGAACAGCACTTCAGATT+AGG 0.401029 7_4:+61733132 Msa1168850:CDS
GCGATCTTCATGTTGGAATT+CGG 0.404653 7_4:+61732802 Msa1168850:CDS
CTGGCTCCCTGCATGCCGGC+AGG 0.407927 7_4:-61734131 None:intergenic
GCCATCTTGAACCTCATTCC+AGG 0.409391 7_4:-61733161 None:intergenic
TTAAACGGTTGTTGGAAACT+AGG 0.416552 7_4:-61734215 None:intergenic
AACTAGTCCTGCCGGCATGC+AGG 0.419630 7_4:+61734124 Msa1168850:CDS
CAATCCAACTGAGATGAATA+TGG 0.421601 7_4:+61732158 Msa1168850:CDS
AAAACATGTGAGTTAACTTC+TGG 0.421701 7_4:-61732264 None:intergenic
AGCGACAAGAAACTTGCGTC+TGG 0.427650 7_4:+61732747 Msa1168850:CDS
TTGGAAATTGGCCATCAATT+GGG 0.428714 7_4:-61734043 None:intergenic
TGCACAATCTTCAGAGAAAC+CGG 0.428735 7_4:+61734340 Msa1168850:CDS
GTCGCAATATTATTATTAAA+CGG 0.430671 7_4:-61734230 None:intergenic
CTGCCGGCATGCAGGGAGCC+AGG 0.432868 7_4:+61734132 Msa1168850:CDS
ACATTAGAGATGAAACATTC+AGG 0.433701 7_4:+61734554 Msa1168850:CDS
GAAATGTTCTCACTGGTGTT+CGG 0.434122 7_4:-61734293 None:intergenic
AGTTGAAGCAATAAGATATA+TGG 0.445009 7_4:+61732374 Msa1168850:CDS
CTAGGCTGAAAGAGACCTAA+TGG 0.448362 7_4:-61734197 None:intergenic
CATCATTATCAAAACTAACT+TGG 0.449861 7_4:-61732455 None:intergenic
TGATGAGTCCTCAGTTTCAA+TGG 0.449908 7_4:-61733183 None:intergenic
GATAATAAACTTCGAAGAAA+CGG 0.452871 7_4:+61732945 Msa1168850:CDS
GCTAATAAGTGATGGAATGA+TGG 0.454476 7_4:+61732983 Msa1168850:CDS
GTTGTCAACAAATGCCTCTT+CGG 0.456311 7_4:-61732705 None:intergenic
ATGCCGGCAGGACTAGTTTC+GGG 0.456648 7_4:-61734119 None:intergenic
TTCTTCCTTGGCGGTATGAA+AGG 0.458131 7_4:-61733993 None:intergenic
CGCCGAGCATGCATGTGAAC+CGG 0.459270 7_4:+61732305 Msa1168850:CDS
AGTTTCTTGTCGCTGACAAA+AGG 0.461470 7_4:-61732738 None:intergenic
CACCGGTTCACATGCATGCT+CGG 0.471821 7_4:-61732307 None:intergenic
AAGTGATGGAATGATGGGTA+GGG 0.472687 7_4:+61732989 Msa1168850:CDS
GACTCCATATTCATCTCAGT+TGG 0.472803 7_4:-61732162 None:intergenic
TTGGAGTCGATCCTTTGTTA+GGG 0.473989 7_4:+61732847 Msa1168850:CDS
ATTTGTCCTGCACCACCTTA+CGG 0.476461 7_4:+61732894 Msa1168850:CDS
CGAAGAAACGGTAAAGGTAA+TGG 0.476494 7_4:+61732957 Msa1168850:CDS
TTGTTTGGAAAAGTTGGCAT+TGG 0.489751 7_4:-61734062 None:intergenic
GGCCATCAATTGGGAAATCT+GGG 0.492331 7_4:-61734034 None:intergenic
AGGACTCATCAAGGATAAGT+TGG 0.493550 7_4:+61733195 Msa1168850:CDS
CTTCAGATTAGGTGGTGTCC+TGG 0.494054 7_4:+61733143 Msa1168850:CDS
TGGTGCGGCTTTGCATGATC+CGG 0.495348 7_4:-61734359 None:intergenic
AATCTCAATTTCTTCCTTGG+CGG 0.497432 7_4:-61734002 None:intergenic
CATCAGATGTACGTGTCGGC+AGG 0.505339 7_4:-61734478 None:intergenic
TAAGTGATGGAATGATGGGT+AGG 0.517866 7_4:+61732988 Msa1168850:CDS
TTCAGGCTGCTGATCCGTCA+TGG 0.519149 7_4:+61733240 Msa1168850:CDS
ACTAGTCCTGCCGGCATGCA+GGG 0.520362 7_4:+61734125 Msa1168850:CDS
ATCTTCATGTTGGAATTCGG+AGG 0.523611 7_4:+61732805 Msa1168850:CDS
GATGACTGTCCCTAATAACT+TGG 0.526305 7_4:+61734259 Msa1168850:CDS
GGCATGCAGGGAGCCAGGCA+TGG 0.527776 7_4:+61734137 Msa1168850:CDS
AAGACCGAAATGACCATGCC+TGG 0.532259 7_4:-61734150 None:intergenic
AATCCTCCGTAAGGTGGTGC+AGG 0.533772 7_4:-61732900 None:intergenic
AGCGTTTCTGCACAATATCT+AGG 0.540389 7_4:-61732579 None:intergenic
GCGACAAGAAACTTGCGTCT+GGG 0.540853 7_4:+61732748 Msa1168850:CDS
GGCGGTATGAAAGGCGAAAG+AGG 0.541655 7_4:-61733984 None:intergenic
GAGTAAGCACTGAAATTCAC+CGG 0.548533 7_4:-61732324 None:intergenic
AGGATGTTCATGGCGAAAAG+TGG 0.550349 7_4:+61732655 Msa1168850:CDS
CGACAAGAAACTTGCGTCTG+GGG 0.550603 7_4:+61732749 Msa1168850:CDS
AATGGATTGCTAATAAGTGA+TGG 0.550837 7_4:+61732975 Msa1168850:CDS
TTACCCGAAACTAGTCCTGC+CGG 0.553790 7_4:+61734116 Msa1168850:CDS
AAGATTATGAAAATCTGGTA+AGG 0.555027 7_4:-61734174 None:intergenic
GCTAAAAGGCGAAATAATGT+TGG 0.555377 7_4:+61732828 Msa1168850:CDS
ATGCCTGGCTCCCTGCATGC+CGG 0.557141 7_4:-61734135 None:intergenic
GTGATGGAATGATGGGTAGG+GGG 0.558347 7_4:+61732991 Msa1168850:CDS
CATTTCAGGCACGTTTATAG+GGG 0.562067 7_4:+61732678 Msa1168850:CDS
TTGCACCATTCCTCCTGCAA+CGG 0.567997 7_4:-61732238 None:intergenic
AGTGATGGAATGATGGGTAG+GGG 0.568376 7_4:+61732990 Msa1168850:CDS
GGCATTTGTTGACAACTGGA+TGG 0.569244 7_4:+61732712 Msa1168850:CDS
TTAGGTGGTGTCCTGGAATG+AGG 0.569864 7_4:+61733150 Msa1168850:CDS
ATTGGGAAATCTGGGAGTTG+AGG 0.570713 7_4:-61734026 None:intergenic
TTGAAACTGAGGACTCATCA+AGG 0.572823 7_4:+61733186 Msa1168850:CDS
AAACTTCGAAGAAACGGTAA+AGG 0.575815 7_4:+61732951 Msa1168850:CDS
AACGATGGAAATCCTCCGTA+AGG 0.577357 7_4:-61732909 None:intergenic
GAAAACGGCGATCTTCATGT+TGG 0.577451 7_4:+61732795 Msa1168850:CDS
AGAGTGTGGACCCTCAGCTA+TGG 0.582931 7_4:+61732211 Msa1168850:CDS
CTATGGCATGCCGTTGCAGG+AGG 0.585809 7_4:+61732228 Msa1168850:CDS
AAGTTATTAGGGACAGTCAT+CGG 0.589613 7_4:-61734257 None:intergenic
CTAATAAGTGATGGAATGAT+GGG 0.591799 7_4:+61732984 Msa1168850:CDS
GCAACGGCATGCCATAGCTG+AGG 0.591988 7_4:-61732222 None:intergenic
GCATGCTCGGCGTGACCCTG+AGG 0.592711 7_4:-61732294 None:intergenic
CATGCTCGGCGTGACCCTGA+GGG 0.593580 7_4:-61732293 None:intergenic
CGTCATGGTCTGATTCTATG+TGG 0.597184 7_4:+61733255 Msa1168850:CDS
GTTTGCATCAGATTGTGTCA+AGG 0.603398 7_4:-61732535 None:intergenic
CGAGCATGAAATGTTCTCAC+TGG 0.604009 7_4:-61734300 None:intergenic
GCATGCCGTTGCAGGAGGAA+TGG 0.606658 7_4:+61732233 Msa1168850:CDS
ATGAAGTGTATGCAAAACTC+AGG 0.607388 7_4:+61732412 Msa1168850:CDS
GATACTATTTCAACTTGCCA+CGG 0.610748 7_4:-61733945 None:intergenic
GCGGTATGAAAGGCGAAAGA+GGG 0.612138 7_4:-61733983 None:intergenic
CAACGGCATGCCATAGCTGA+GGG 0.613865 7_4:-61732221 None:intergenic
TCCTGGAATGAGGTTCAAGA+TGG 0.614384 7_4:+61733160 Msa1168850:CDS
TCTTCATGTTGGAATTCGGA+GGG 0.615735 7_4:+61732806 Msa1168850:CDS
TTTCGCCTTTCATACCGCCA+AGG 0.619271 7_4:+61733988 Msa1168850:CDS
TCTTCCTCTCCCGAAAACGA+TGG 0.620463 7_4:-61732924 None:intergenic
GAACAGCACTTCAGATTAGG+TGG 0.620797 7_4:+61733135 Msa1168850:CDS
TTTATAGGGGAACGCCGAAG+AGG 0.625074 7_4:+61732691 Msa1168850:CDS
GTTATTGAAGCAATAAAACT+CGG 0.633322 7_4:+61733032 Msa1168850:CDS
CCAGATTTCCACCCTAACAA+AGG 0.634082 7_4:-61732858 None:intergenic
CTCTCATCAGATGTACGTGT+CGG 0.637287 7_4:-61734482 None:intergenic
CAAGATGGCCATTGAAACTG+AGG 0.643200 7_4:+61733175 Msa1168850:CDS
AAAGGCGAAAGAGGGATCGA+AGG 0.643435 7_4:-61733975 None:intergenic
GATGGAAATCCTCCGTAAGG+TGG 0.645097 7_4:-61732906 None:intergenic
TTCTATGTGGAGACTTCTCG+AGG 0.645176 7_4:+61733268 Msa1168850:CDS
ATGTGAAAAGAGTGAATCCG+TGG 0.650057 7_4:+61733928 Msa1168850:CDS
CAAACAATACAAGTCGACAC+TGG 0.651728 7_4:+61734398 Msa1168850:CDS
TCTGATGCAAACAATGGTGG+TGG 0.655667 7_4:+61732546 Msa1168850:CDS
CAATGCGAAGAAACATTCGC+AGG 0.655730 7_4:+61734527 Msa1168850:CDS
CATCTGATGAGAGGTTCGAG+TGG 0.680653 7_4:+61734492 Msa1168850:CDS
TGTCCTGCACCACCTTACGG+AGG 0.685773 7_4:+61732897 Msa1168850:CDS
CACATAGAATCAGACCATGA+CGG 0.689130 7_4:-61733254 None:intergenic
CGACACGTACATCTGATGAG+AGG 0.689516 7_4:+61734483 Msa1168850:CDS
ACACAATCTGATGCAAACAA+TGG 0.696099 7_4:+61732540 Msa1168850:CDS
CAATCTGATGCAAACAATGG+TGG 0.722659 7_4:+61732543 Msa1168850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAAATTGGAATATT+AGG - chr7_4:61734098-61734117 None:intergenic 10.0%
!!! GTTAGATTTTACTTATATTT+TGG + chr7_4:61733394-61733413 Msa1168850:intron 15.0%
!!! TTTTAGCAAATTCTAATAAT+AGG - chr7_4:61733583-61733602 None:intergenic 15.0%
!! TTAATGTATATATTTGTGTA+TGG + chr7_4:61733688-61733707 Msa1168850:intron 15.0%
!! TAGTAATATATGCAATAAAA+AGG - chr7_4:61733805-61733824 None:intergenic 15.0%
!! ACAATGAAAGAAAAAAGAAA+AGG + chr7_4:61732132-61732151 Msa1168850:CDS 20.0%
!! TCAAGTAAATTAATTCTAGA+GGG - chr7_4:61733317-61733336 None:intergenic 20.0%
!!! GAATGTTTTGAGAATAATAA+CGG + chr7_4:61733354-61733373 Msa1168850:intron 20.0%
!! ATTCAAAGTAAAATATGTGA+AGG - chr7_4:61733650-61733669 None:intergenic 20.0%
!! TATTATTATTAAACGGTTGT+TGG - chr7_4:61734226-61734245 None:intergenic 20.0%
!! GTCGCAATATTATTATTAAA+CGG - chr7_4:61734233-61734252 None:intergenic 20.0%
! AGTTGAAGCAATAAGATATA+TGG + chr7_4:61732374-61732393 Msa1168850:CDS 25.0%
! CTAACTTGGTTAATATTCAT+AGG - chr7_4:61732444-61732463 None:intergenic 25.0%
! CATCATTATCAAAACTAACT+TGG - chr7_4:61732458-61732477 None:intergenic 25.0%
!!! CAAGTTAGTTTTGATAATGA+TGG + chr7_4:61732456-61732475 Msa1168850:CDS 25.0%
! GATAATAAACTTCGAAGAAA+CGG + chr7_4:61732945-61732964 Msa1168850:CDS 25.0%
! GTTATTGAAGCAATAAAACT+CGG + chr7_4:61733032-61733051 Msa1168850:CDS 25.0%
! CTTGTGAAAACTTCTTTAAT+TGG + chr7_4:61733113-61733132 Msa1168850:CDS 25.0%
! CTCAAGTAAATTAATTCTAG+AGG - chr7_4:61733318-61733337 None:intergenic 25.0%
!! TGATTTGTATAAATTCCACA+AGG - chr7_4:61733464-61733483 None:intergenic 25.0%
! AACTTAAAAGGATTATGCTT+TGG - chr7_4:61733533-61733552 None:intergenic 25.0%
!! TTTTCATCAGTACCATAAAT+TGG + chr7_4:61733551-61733570 Msa1168850:intron 25.0%
! GTATGGTAATATAGATACAA+TGG + chr7_4:61733705-61733724 Msa1168850:intron 25.0%
! TCTCTTCTTACAATTTCATT+AGG - chr7_4:61733744-61733763 None:intergenic 25.0%
!!! TTTCTGATGTCATACTTTTT+AGG + chr7_4:61733875-61733894 Msa1168850:intron 25.0%
!!! TCATACTTTTTAGGTTACAT+GGG + chr7_4:61733884-61733903 Msa1168850:intron 25.0%
!!! TTCACATTTTTAAGTATCTC+AGG - chr7_4:61733915-61733934 None:intergenic 25.0%
! TTGGAATATTAGGATTTAGA+AGG - chr7_4:61734088-61734107 None:intergenic 25.0%
!! GTTTCGGGTAAATAAAAAAT+TGG - chr7_4:61734107-61734126 None:intergenic 25.0%
! AAGATTATGAAAATCTGGTA+AGG - chr7_4:61734177-61734196 None:intergenic 25.0%
! AATGGAAGATTATGAAAATC+TGG - chr7_4:61734182-61734201 None:intergenic 25.0%
!! GATTTTCATAATCTTCCATT+AGG + chr7_4:61734182-61734201 Msa1168850:CDS 25.0%
!!! ATGATTAGTCATTTTCTTCT+CGG - chr7_4:61734435-61734454 None:intergenic 25.0%
AAAACATGTGAGTTAACTTC+TGG - chr7_4:61732267-61732286 None:intergenic 30.0%
!!! GTGTTTTTGAGATCTGAAAA+CGG + chr7_4:61732780-61732799 Msa1168850:CDS 30.0%
!! AATGGATTGCTAATAAGTGA+TGG + chr7_4:61732975-61732994 Msa1168850:CDS 30.0%
! CTAATAAGTGATGGAATGAT+GGG + chr7_4:61732984-61733003 Msa1168850:CDS 30.0%
GGATAATAAACCACATCAAA+CGG - chr7_4:61733071-61733090 None:intergenic 30.0%
TTGATGTGGTTTATTATCCT+CGG + chr7_4:61733072-61733091 Msa1168850:intron 30.0%
!! TCAAGGATAAGTTGGTTTAT+CGG + chr7_4:61733203-61733222 Msa1168850:CDS 30.0%
TTGCAAGAATACACATTCTA+TGG - chr7_4:61733498-61733517 None:intergenic 30.0%
!! GGTACTGATGAAAACTTAAA+AGG - chr7_4:61733545-61733564 None:intergenic 30.0%
AATAGGAAGCTTCCAATTTA+TGG - chr7_4:61733566-61733585 None:intergenic 30.0%
! TATGATAGTGATGTAGGTAT+AGG - chr7_4:61733608-61733627 None:intergenic 30.0%
! CTAATGTATGATAGTGATGT+AGG - chr7_4:61733614-61733633 None:intergenic 30.0%
CTACATCACTATCATACATT+AGG + chr7_4:61733612-61733631 Msa1168850:intron 30.0%
TAGATACAATGGAACATTGT+TGG + chr7_4:61733716-61733735 Msa1168850:intron 30.0%
TGACATCAGAAAATCATTCA+CGG - chr7_4:61733867-61733886 None:intergenic 30.0%
!!! GTCATACTTTTTAGGTTACA+TGG + chr7_4:61733883-61733902 Msa1168850:intron 30.0%
TTAGGATTTAGAAGGTTGTT+TGG - chr7_4:61734080-61734099 None:intergenic 30.0%
TTTGCAATGCCAAGTTATTA+GGG - chr7_4:61734271-61734290 None:intergenic 30.0%
! TTTTGCAATGCCAAGTTATT+AGG - chr7_4:61734272-61734291 None:intergenic 30.0%
ACATTAGAGATGAAACATTC+AGG + chr7_4:61734554-61734573 Msa1168850:CDS 30.0%
CAATCCAACTGAGATGAATA+TGG + chr7_4:61732158-61732177 Msa1168850:CDS 35.0%
GAAAAATGTGAACAAGAGTG+TGG + chr7_4:61732197-61732216 Msa1168850:CDS 35.0%
! TGGAATGAAAGACGGAATTT+TGG - chr7_4:61732349-61732368 None:intergenic 35.0%
ACTCTACATGGAATGAAAGA+CGG - chr7_4:61732357-61732376 None:intergenic 35.0%
CTTATTGCTTCAACTCTACA+TGG - chr7_4:61732369-61732388 None:intergenic 35.0%
! GAGTTTTGCATACACTTCAT+CGG - chr7_4:61732412-61732431 None:intergenic 35.0%
ATGAAGTGTATGCAAAACTC+AGG + chr7_4:61732412-61732431 Msa1168850:CDS 35.0%
!! TTTGATAATGATGGTGTTGC+TGG + chr7_4:61732465-61732484 Msa1168850:CDS 35.0%
! CATCAACGTGTCTGAAATTA+AGG + chr7_4:61732488-61732507 Msa1168850:CDS 35.0%
ACACAATCTGATGCAAACAA+TGG + chr7_4:61732540-61732559 Msa1168850:CDS 35.0%
GAAAAATATCCTGAAGAGGA+GGG - chr7_4:61732632-61732651 None:intergenic 35.0%
TTGGGAAAAATATCCTGAAG+AGG - chr7_4:61732636-61732655 None:intergenic 35.0%
! TCTTCAGGATATTTTTCCCA+AGG + chr7_4:61732635-61732654 Msa1168850:CDS 35.0%
! ATTTTTCCCAAGGATGTTCA+TGG + chr7_4:61732645-61732664 Msa1168850:CDS 35.0%
GCTAAAAGGCGAAATAATGT+TGG + chr7_4:61732828-61732847 Msa1168850:CDS 35.0%
AAACTTCGAAGAAACGGTAA+AGG + chr7_4:61732951-61732970 Msa1168850:CDS 35.0%
! GCTAATAAGTGATGGAATGA+TGG + chr7_4:61732983-61733002 Msa1168850:CDS 35.0%
! GAAGTTTTCACAAGAAACTC+AGG - chr7_4:61733107-61733126 None:intergenic 35.0%
TTGTCATATAGCAGCTATAG+TGG + chr7_4:61733423-61733442 Msa1168850:intron 35.0%
GATACTATTTCAACTTGCCA+CGG - chr7_4:61733948-61733967 None:intergenic 35.0%
AATCTCAATTTCTTCCTTGG+CGG - chr7_4:61734005-61734024 None:intergenic 35.0%
GGTAATCTCAATTTCTTCCT+TGG - chr7_4:61734008-61734027 None:intergenic 35.0%
TTGGAAATTGGCCATCAATT+GGG - chr7_4:61734046-61734065 None:intergenic 35.0%
ATTGGAAATTGGCCATCAAT+TGG - chr7_4:61734047-61734066 None:intergenic 35.0%
! GAAAAGTTGGCATTGGAAAT+TGG - chr7_4:61734058-61734077 None:intergenic 35.0%
TTGTTTGGAAAAGTTGGCAT+TGG - chr7_4:61734065-61734084 None:intergenic 35.0%
AGAAGGTTGTTTGGAAAAGT+TGG - chr7_4:61734071-61734090 None:intergenic 35.0%
TTAAACGGTTGTTGGAAACT+AGG - chr7_4:61734218-61734237 None:intergenic 35.0%
AAGTTATTAGGGACAGTCAT+CGG - chr7_4:61734260-61734279 None:intergenic 35.0%
GACTCCATATTCATCTCAGT+TGG - chr7_4:61732165-61732184 None:intergenic 40.0%
! ACATGTTTTCTACTTCCCTC+AGG + chr7_4:61732278-61732297 Msa1168850:CDS 40.0%
! CATGTTTTCTACTTCCCTCA+GGG + chr7_4:61732279-61732298 Msa1168850:CDS 40.0%
!! GAGTAAGCACTGAAATTCAC+CGG - chr7_4:61732327-61732346 None:intergenic 40.0%
GTTTGCATCAGATTGTGTCA+AGG - chr7_4:61732538-61732557 None:intergenic 40.0%
CAATCTGATGCAAACAATGG+TGG + chr7_4:61732543-61732562 Msa1168850:CDS 40.0%
AGCGTTTCTGCACAATATCT+AGG - chr7_4:61732582-61732601 None:intergenic 40.0%
!!! AGAAACGCTTTTTCCTCGTT+TGG + chr7_4:61732593-61732612 Msa1168850:intron 40.0%
TTAGCTGAATAGTCCAAACG+AGG - chr7_4:61732609-61732628 None:intergenic 40.0%
GGAAAAATATCCTGAAGAGG+AGG - chr7_4:61732633-61732652 None:intergenic 40.0%
! TTTTCGCCATGAACATCCTT+GGG - chr7_4:61732654-61732673 None:intergenic 40.0%
GCATTTCAGGCACGTTTATA+GGG + chr7_4:61732677-61732696 Msa1168850:CDS 40.0%
CATTTCAGGCACGTTTATAG+GGG + chr7_4:61732678-61732697 Msa1168850:CDS 40.0%
GTTGTCAACAAATGCCTCTT+CGG - chr7_4:61732708-61732727 None:intergenic 40.0%
!! AAGAGGCATTTGTTGACAAC+TGG + chr7_4:61732708-61732727 Msa1168850:CDS 40.0%
AGTTTCTTGTCGCTGACAAA+AGG - chr7_4:61732741-61732760 None:intergenic 40.0%
GCGATCTTCATGTTGGAATT+CGG + chr7_4:61732802-61732821 Msa1168850:CDS 40.0%
ATCTTCATGTTGGAATTCGG+AGG + chr7_4:61732805-61732824 Msa1168850:CDS 40.0%
TCTTCATGTTGGAATTCGGA+GGG + chr7_4:61732806-61732825 Msa1168850:CDS 40.0%
TTGGAGTCGATCCTTTGTTA+GGG + chr7_4:61732847-61732866 Msa1168850:CDS 40.0%
!! TGGAAATCTGGTAGTGGAAT+TGG + chr7_4:61732870-61732889 Msa1168850:intron 40.0%
CGAAGAAACGGTAAAGGTAA+TGG + chr7_4:61732957-61732976 Msa1168850:CDS 40.0%
!! TAAGTGATGGAATGATGGGT+AGG + chr7_4:61732988-61733007 Msa1168850:CDS 40.0%
!! AAGTGATGGAATGATGGGTA+GGG + chr7_4:61732989-61733008 Msa1168850:CDS 40.0%
TAATATGCAGCCGTTTGATG+TGG + chr7_4:61733058-61733077 Msa1168850:intron 40.0%
TTGGAACAGCACTTCAGATT+AGG + chr7_4:61733132-61733151 Msa1168850:CDS 40.0%
TGATGAGTCCTCAGTTTCAA+TGG - chr7_4:61733186-61733205 None:intergenic 40.0%
TTGAAACTGAGGACTCATCA+AGG + chr7_4:61733186-61733205 Msa1168850:CDS 40.0%
AGGACTCATCAAGGATAAGT+TGG + chr7_4:61733195-61733214 Msa1168850:CDS 40.0%
CACATAGAATCAGACCATGA+CGG - chr7_4:61733257-61733276 None:intergenic 40.0%
CACTATATTGCTATGCCTTG+TGG + chr7_4:61733446-61733465 Msa1168850:intron 40.0%
TAAAATATGTGAAGGCCCTC+GGG - chr7_4:61733642-61733661 None:intergenic 40.0%
GTAAAATATGTGAAGGCCCT+CGG - chr7_4:61733643-61733662 None:intergenic 40.0%
ATCATTCACGGCTGAAACAA+AGG - chr7_4:61733855-61733874 None:intergenic 40.0%
ATGTGAAAAGAGTGAATCCG+TGG + chr7_4:61733928-61733947 Msa1168850:CDS 40.0%
GATGACTGTCCCTAATAACT+TGG + chr7_4:61734259-61734278 Msa1168850:CDS 40.0%
GAAATGTTCTCACTGGTGTT+CGG - chr7_4:61734296-61734315 None:intergenic 40.0%
TGCACAATCTTCAGAGAAAC+CGG + chr7_4:61734340-61734359 Msa1168850:CDS 40.0%
! TTTGGCCAAAAAGCACAAGT+TGG - chr7_4:61734382-61734401 None:intergenic 40.0%
!! CAGTGTCGACTTGTATTGTT+TGG - chr7_4:61734400-61734419 None:intergenic 40.0%
CAAACAATACAAGTCGACAC+TGG + chr7_4:61734398-61734417 Msa1168850:CDS 40.0%
TCTGATGCAAACAATGGTGG+TGG + chr7_4:61732546-61732565 Msa1168850:CDS 45.0%
! CTTTTCGCCATGAACATCCT+TGG - chr7_4:61732655-61732674 None:intergenic 45.0%
AGGATGTTCATGGCGAAAAG+TGG + chr7_4:61732655-61732674 Msa1168850:CDS 45.0%
ATGGCGAAAAGTGGCATTTC+AGG + chr7_4:61732664-61732683 Msa1168850:CDS 45.0%
GGCATTTCAGGCACGTTTAT+AGG + chr7_4:61732676-61732695 Msa1168850:CDS 45.0%
! GGCATTTGTTGACAACTGGA+TGG + chr7_4:61732712-61732731 Msa1168850:CDS 45.0%
GAAAACGGCGATCTTCATGT+TGG + chr7_4:61732795-61732814 Msa1168850:CDS 45.0%
TTGGAATTCGGAGGGCTAAA+AGG + chr7_4:61732814-61732833 Msa1168850:CDS 45.0%
GTTGGAGTCGATCCTTTGTT+AGG + chr7_4:61732846-61732865 Msa1168850:CDS 45.0%
CCAGATTTCCACCCTAACAA+AGG - chr7_4:61732861-61732880 None:intergenic 45.0%
CCTTTGTTAGGGTGGAAATC+TGG + chr7_4:61732858-61732877 Msa1168850:intron 45.0%
TTAGGGTGGAAATCTGGTAG+TGG + chr7_4:61732864-61732883 Msa1168850:intron 45.0%
ATTTGTCCTGCACCACCTTA+CGG + chr7_4:61732894-61732913 Msa1168850:CDS 45.0%
AACGATGGAAATCCTCCGTA+AGG - chr7_4:61732912-61732931 None:intergenic 45.0%
! CGGAGGATTTCCATCGTTTT+CGG + chr7_4:61732914-61732933 Msa1168850:CDS 45.0%
! GGAGGATTTCCATCGTTTTC+GGG + chr7_4:61732915-61732934 Msa1168850:CDS 45.0%
!! ATTTCCATCGTTTTCGGGAG+AGG + chr7_4:61732920-61732939 Msa1168850:CDS 45.0%
!! AGTGATGGAATGATGGGTAG+GGG + chr7_4:61732990-61733009 Msa1168850:CDS 45.0%
GTGGTTTATTATCCTCGGTC+AGG + chr7_4:61733077-61733096 Msa1168850:intron 45.0%
GAACAGCACTTCAGATTAGG+TGG + chr7_4:61733135-61733154 Msa1168850:CDS 45.0%
TCCTGGAATGAGGTTCAAGA+TGG + chr7_4:61733160-61733179 Msa1168850:CDS 45.0%
CAAGATGGCCATTGAAACTG+AGG + chr7_4:61733175-61733194 Msa1168850:CDS 45.0%
CGGAACTATTGCTTCTGTTC+AGG + chr7_4:61733223-61733242 Msa1168850:CDS 45.0%
CGTCATGGTCTGATTCTATG+TGG + chr7_4:61733255-61733274 Msa1168850:CDS 45.0%
TTCTATGTGGAGACTTCTCG+AGG + chr7_4:61733268-61733287 Msa1168850:CDS 45.0%
TCATACATTAGGTATCCCCG+AGG + chr7_4:61733623-61733642 Msa1168850:intron 45.0%
CATACATTAGGTATCCCCGA+GGG + chr7_4:61733624-61733643 Msa1168850:intron 45.0%
AAAATATGTGAAGGCCCTCG+GGG - chr7_4:61733641-61733660 None:intergenic 45.0%
TTCTTCCTTGGCGGTATGAA+AGG - chr7_4:61733996-61734015 None:intergenic 45.0%
ATTGGGAAATCTGGGAGTTG+AGG - chr7_4:61734029-61734048 None:intergenic 45.0%
CTCCCAGATTTCCCAATTGA+TGG + chr7_4:61734032-61734051 Msa1168850:CDS 45.0%
GGCCATCAATTGGGAAATCT+GGG - chr7_4:61734037-61734056 None:intergenic 45.0%
TGGCCATCAATTGGGAAATC+TGG - chr7_4:61734038-61734057 None:intergenic 45.0%
CTAGGCTGAAAGAGACCTAA+TGG - chr7_4:61734200-61734219 None:intergenic 45.0%
CGAGCATGAAATGTTCTCAC+TGG - chr7_4:61734303-61734322 None:intergenic 45.0%
!! CCAAAAAGCACAAGTTGGTG+CGG - chr7_4:61734377-61734396 None:intergenic 45.0%
CTCTCATCAGATGTACGTGT+CGG - chr7_4:61734485-61734504 None:intergenic 45.0%
CTGCGAATGTTTCTTCGCAT+TGG - chr7_4:61734529-61734548 None:intergenic 45.0%
CAATGCGAAGAAACATTCGC+AGG + chr7_4:61734527-61734546 Msa1168850:CDS 45.0%
TTGCACCATTCCTCCTGCAA+CGG - chr7_4:61732241-61732260 None:intergenic 50.0%
TTCAGCTAACCCTCCTCTTC+AGG + chr7_4:61732620-61732639 Msa1168850:intron 50.0%
TTTATAGGGGAACGCCGAAG+AGG + chr7_4:61732691-61732710 Msa1168850:CDS 50.0%
AGCGACAAGAAACTTGCGTC+TGG + chr7_4:61732747-61732766 Msa1168850:CDS 50.0%
GCGACAAGAAACTTGCGTCT+GGG + chr7_4:61732748-61732767 Msa1168850:CDS 50.0%
CGACAAGAAACTTGCGTCTG+GGG + chr7_4:61732749-61732768 Msa1168850:CDS 50.0%
GAGTCGATCCTTTGTTAGGG+TGG + chr7_4:61732850-61732869 Msa1168850:intron 50.0%
GATGGAAATCCTCCGTAAGG+TGG - chr7_4:61732909-61732928 None:intergenic 50.0%
TCTTCCTCTCCCGAAAACGA+TGG - chr7_4:61732927-61732946 None:intergenic 50.0%
!! GTGATGGAATGATGGGTAGG+GGG + chr7_4:61732991-61733010 Msa1168850:CDS 50.0%
CTTCAGATTAGGTGGTGTCC+TGG + chr7_4:61733143-61733162 Msa1168850:CDS 50.0%
TTAGGTGGTGTCCTGGAATG+AGG + chr7_4:61733150-61733169 Msa1168850:CDS 50.0%
GCCATCTTGAACCTCATTCC+AGG - chr7_4:61733164-61733183 None:intergenic 50.0%
AAAGGCGAAAGAGGGATCGA+AGG - chr7_4:61733978-61733997 None:intergenic 50.0%
GCGGTATGAAAGGCGAAAGA+GGG - chr7_4:61733986-61734005 None:intergenic 50.0%
TTTCGCCTTTCATACCGCCA+AGG + chr7_4:61733988-61734007 Msa1168850:CDS 50.0%
TTACCCGAAACTAGTCCTGC+CGG + chr7_4:61734116-61734135 Msa1168850:CDS 50.0%
AAGACCGAAATGACCATGCC+TGG - chr7_4:61734153-61734172 None:intergenic 50.0%
! CCGCACCAACTTGTGCTTTT+TGG + chr7_4:61734374-61734393 Msa1168850:CDS 50.0%
CGACACGTACATCTGATGAG+AGG + chr7_4:61734483-61734502 Msa1168850:CDS 50.0%
CATCTGATGAGAGGTTCGAG+TGG + chr7_4:61734492-61734511 Msa1168850:CDS 50.0%
AGAGTGTGGACCCTCAGCTA+TGG + chr7_4:61732211-61732230 Msa1168850:CDS 55.0%
CAACGGCATGCCATAGCTGA+GGG - chr7_4:61732224-61732243 None:intergenic 55.0%
!! CACCGGTTCACATGCATGCT+CGG - chr7_4:61732310-61732329 None:intergenic 55.0%
AATCCTCCGTAAGGTGGTGC+AGG - chr7_4:61732903-61732922 None:intergenic 55.0%
!! TGGAATGATGGGTAGGGGGA+AGG + chr7_4:61732995-61733014 Msa1168850:CDS 55.0%
!! AACTCAGGAGTACCTGACCG+AGG - chr7_4:61733092-61733111 None:intergenic 55.0%
TTCAGGCTGCTGATCCGTCA+TGG + chr7_4:61733240-61733259 Msa1168850:CDS 55.0%
GGCGGTATGAAAGGCGAAAG+AGG - chr7_4:61733987-61734006 None:intergenic 55.0%
!! ATGCCGGCAGGACTAGTTTC+GGG - chr7_4:61734122-61734141 None:intergenic 55.0%
!! CATGCCGGCAGGACTAGTTT+CGG - chr7_4:61734123-61734142 None:intergenic 55.0%
GGAGCCAGGCATGGTCATTT+CGG + chr7_4:61734146-61734165 Msa1168850:CDS 55.0%
TGGTGCGGCTTTGCATGATC+CGG - chr7_4:61734362-61734381 None:intergenic 55.0%
! CATCAGATGTACGTGTCGGC+AGG - chr7_4:61734481-61734500 None:intergenic 55.0%
GCAACGGCATGCCATAGCTG+AGG - chr7_4:61732225-61732244 None:intergenic 60.0%
CAGCTATGGCATGCCGTTGC+AGG + chr7_4:61732225-61732244 Msa1168850:CDS 60.0%
CTATGGCATGCCGTTGCAGG+AGG + chr7_4:61732228-61732247 Msa1168850:CDS 60.0%
GCATGCCGTTGCAGGAGGAA+TGG + chr7_4:61732233-61732252 Msa1168850:CDS 60.0%
CGCCGAGCATGCATGTGAAC+CGG + chr7_4:61732305-61732324 Msa1168850:CDS 60.0%
TGTCCTGCACCACCTTACGG+AGG + chr7_4:61732897-61732916 Msa1168850:CDS 60.0%
AACTAGTCCTGCCGGCATGC+AGG + chr7_4:61734124-61734143 Msa1168850:CDS 60.0%
ACTAGTCCTGCCGGCATGCA+GGG + chr7_4:61734125-61734144 Msa1168850:CDS 60.0%
CATGCTCGGCGTGACCCTGA+GGG - chr7_4:61732296-61732315 None:intergenic 65.0%
ATGCCTGGCTCCCTGCATGC+CGG - chr7_4:61734138-61734157 None:intergenic 65.0%
GCATGCTCGGCGTGACCCTG+AGG - chr7_4:61732297-61732316 None:intergenic 70.0%
GGCATGCAGGGAGCCAGGCA+TGG + chr7_4:61734137-61734156 Msa1168850:CDS 70.0%
CTGGCTCCCTGCATGCCGGC+AGG - chr7_4:61734134-61734153 None:intergenic 75.0%
CTGCCGGCATGCAGGGAGCC+AGG + chr7_4:61734132-61734151 Msa1168850:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 61732126 61734589 61732126 ID=Msa1168850;Name=Msa1168850
chr7_4 mRNA 61732126 61734589 61732126 ID=Msa1168850-mRNA-1;Parent=Msa1168850;Name=Msa1168850-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|0.2|0.16|6|0|587
chr7_4 exon 61732126 61732355 61732126 ID=Msa1168850-mRNA-1:exon:19485;Parent=Msa1168850-mRNA-1
chr7_4 exon 61732374 61732609 61732374 ID=Msa1168850-mRNA-1:exon:19486;Parent=Msa1168850-mRNA-1
chr7_4 exon 61732625 61732868 61732625 ID=Msa1168850-mRNA-1:exon:19487;Parent=Msa1168850-mRNA-1
chr7_4 exon 61732884 61733053 61732884 ID=Msa1168850-mRNA-1:exon:19488;Parent=Msa1168850-mRNA-1
chr7_4 exon 61733099 61733289 61733099 ID=Msa1168850-mRNA-1:exon:19489;Parent=Msa1168850-mRNA-1
chr7_4 exon 61733897 61734589 61733897 ID=Msa1168850-mRNA-1:exon:19490;Parent=Msa1168850-mRNA-1
chr7_4 CDS 61732126 61732355 61732126 ID=Msa1168850-mRNA-1:cds;Parent=Msa1168850-mRNA-1
chr7_4 CDS 61732374 61732609 61732374 ID=Msa1168850-mRNA-1:cds;Parent=Msa1168850-mRNA-1
chr7_4 CDS 61732625 61732868 61732625 ID=Msa1168850-mRNA-1:cds;Parent=Msa1168850-mRNA-1
chr7_4 CDS 61732884 61733053 61732884 ID=Msa1168850-mRNA-1:cds;Parent=Msa1168850-mRNA-1
chr7_4 CDS 61733099 61733289 61733099 ID=Msa1168850-mRNA-1:cds;Parent=Msa1168850-mRNA-1
chr7_4 CDS 61733897 61734589 61733897 ID=Msa1168850-mRNA-1:cds;Parent=Msa1168850-mRNA-1
Gene Sequence

>Msa1168850

GAATTGACAATGAAAGAAAAAAGAAAAGGTTGCAATCCAACTGAGATGAATATGGAGTCAAACAAGAAATTGAAAAATGTGAACAAGAGTGTGGACCCTCAGCTATGGCATGCCGTTGCAGGAGGAATGGTGCAAATGCCAGAAGTTAACTCACATGTTTTCTACTTCCCTCAGGGTCACGCCGAGCATGCATGTGAACCGGTGAATTTCAGTGCTTACTCCAAAATTCCAGTTGAAGCAATAAGATATATGGCTAATCATGAGACCGATGAAGTGTATGCAAAACTCAGGCTTGTTCCTATGAATATTAACCAAGTTAGTTTTGATAATGATGGTGTTGCTGGCATCAACGTGTCTGAAATTAAGGATAAACATCAATCTTTTGCGAAAACCTTGACACAATCTGATGCAAACAATGGTGGTGGCTTTTCTTGTCCTAGATATTGTGCAGAAACGCTTTTTCCTCCTAACCCTCCTCTTCAGGATATTTTTCCCAAGGATGTTCATGGCGAAAAGTGGCATTTCAGGCACGTTTATAGGGGAACGCCGAAGAGGCATTTGTTGACAACTGGATGGAGTCCTTTTGTCAGCGACAAGAAACTTGCGTCTGGGGATTCGATTGTGTTTTTGAGATCTGAAAACGGCGATCTTCATGTTGGAATTCGGAGGGCTAAAAGGCGAAATAATGTTGGAGTCGATCCTTTGTTAGGTGGAATTGGAATTTGTCCTGCACCACCTTACGGAGGATTTCCATCGTTTTCGGGAGAGGAAGATAATAAACTTCGAAGAAACGGTAAAGGTAATGGATTGCTAATAAGTGATGGAATGATGGGTAGGGGGAAGGTGAAAGCTCTAGAAGTTATTGAAGCAATAAAACTCGGTACTCCTGAGTTTCTTGTGAAAACTTCTTTAATTGGAACAGCACTTCAGATTAGGTGGTGTCCTGGAATGAGGTTCAAGATGGCCATTGAAACTGAGGACTCATCAAGGATAAGTTGGTTTATCGGAACTATTGCTTCTGTTCAGGCTGCTGATCCGTCATGGTCTGATTCTATGTGGAGACTTCTCGAGGTTACATGGGATGAACCTGAGATACTTAAAAATGTGAAAAGAGTGAATCCGTGGCAAGTTGAAATAGTATCGAACATGCCTTCGATCCCTCTTTCGCCTTTCATACCGCCAAGGAAGAAATTGAGATTACCTCAACTCCCAGATTTCCCAATTGATGGCCAATTTCCAATGCCAACTTTTCCAAACAACCTTCTAAATCCTAATATTCCAATTTTTTATTTACCCGAAACTAGTCCTGCCGGCATGCAGGGAGCCAGGCATGGTCATTTCGGTCTTACCTTACCAGATTTTCATAATCTTCCATTAGGTCTCTTTCAGCCTAGTTTCCAACAACCGTTTAATAATAATATTGCGACGATGCCGATGACTGTCCCTAATAACTTGGCATTGCAAAAGCCGAACACCAGTGAGAACATTTCATGCTCGCATTCGATATCAACTTCTGCACAATCTTCAGAGAAACCGGATCATGCAAAGCCGCACCAACTTGTGCTTTTTGGCCAAACAATACAAGTCGACACTGGAAATGAGAATTCCGAGAAGAAAATGACTAATCATTTGTCTGATTTTCATCTACAAAGCCTGCCGACACGTACATCTGATGAGAGGTTCGAGTGGAATGCTAAGAACCAATGCGAAGAAACATTCGCAGGAGAAACATTAGAGATGAAACATTCAGGTAAGAATGAATAA
Protein sequence

>Msa1168850

ELTMKEKRKGCNPTEMNMESNKKLKNVNKSVDPQLWHAVAGGMVQMPEVNSHVFYFPQGHAEHACEPVNFSAYSKIPVEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSEIKDKHQSFAKTLTQSDANNGGGFSCPRYCAETLFPPNPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLLGGIGICPAPPYGGFPSFSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAIKLGTPEFLVKTSLIGTALQIRWCPGMRFKMAIETEDSSRISWFIGTIASVQAADPSWSDSMWRLLEVTWDEPEILKNVKRVNPWQVEIVSNMPSIPLSPFIPPRKKLRLPQLPDFPIDGQFPMPTFPNNLLNPNIPIFYLPETSPAGMQGARHGHFGLTLPDFHNLPLGLFQPSFQQPFNNNIATMPMTVPNNLALQKPNTSENISCSHSISTSAQSSEKPDHAKPHQLVLFGQTIQVDTGNENSEKKMTNHLSDFHLQSLPTRTSDERFEWNAKNQCEETFAGETLEMKHSGKNE*