Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169900 | XP_024626574.1 | 63.608 | 316 | 42 | 7 | 1 | 299 | 1 | 260 | 1.45e-117 | 351 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169900 | A0A072TYR1 | 64.013 | 314 | 45 | 7 | 1 | 297 | 1 | 263 | 7.58e-117 | 356 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1169900 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169900 | MtrunA17_Chr2g0287651 | 61.905 | 168 | 50 | 2 | 151 | 304 | 58 | 225 | 1.16e-66 | 226 |
| Msa1169900 | MtrunA17_Chr2g0287651 | 60.000 | 65 | 26 | 0 | 304 | 368 | 494 | 558 | 3.22e-18 | 86.3 |
| Msa1169900 | MtrunA17_Chr1g0203051 | 32.751 | 229 | 134 | 6 | 93 | 304 | 4 | 229 | 1.48e-24 | 105 |
| Msa1169900 | MtrunA17_Chr8g0389811 | 36.975 | 119 | 66 | 3 | 136 | 245 | 48 | 166 | 1.22e-13 | 69.3 |
| Msa1169900 | MtrunA17_Chr6g0479721 | 49.541 | 109 | 46 | 3 | 1 | 108 | 1 | 101 | 5.91e-12 | 62.8 |
| Msa1169900 | MtrunA17_Chr1g0171741 | 28.188 | 149 | 88 | 4 | 150 | 284 | 119 | 262 | 1.20e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 75 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGCCTTTACTGATTT+TGG | 0.059598 | 7_4:-63013586 | Msa1169900:CDS |
| AATAAGAACTTGTCATATAA+TGG | 0.247315 | 7_4:-63012648 | Msa1169900:CDS |
| TGCATTTACACCCTGTTTAT+CGG | 0.264525 | 7_4:-63012721 | Msa1169900:CDS |
| TGTTCACTACAGACCCAAAA+AGG | 0.266221 | 7_4:-63012807 | Msa1169900:CDS |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 7_4:-63013358 | Msa1169900:CDS |
| CATTAACTGCTGAAGGAATA+AGG | 0.318241 | 7_4:-63013063 | Msa1169900:CDS |
| TGCTGAAGGAATAAGGAAAA+TGG | 0.318497 | 7_4:-63013056 | Msa1169900:CDS |
| CTGTTAGGAAGAGTGATATT+AGG | 0.340554 | 7_4:-63012970 | Msa1169900:CDS |
| CATTGGTTGGAGTAGGTTCA+TGG | 0.364482 | 7_4:+63012747 | None:intergenic |
| ATAAGAACTTGTCATATAAT+GGG | 0.403187 | 7_4:-63012647 | Msa1169900:CDS |
| GGTACACCGGAACATGATTA+CGG | 0.407134 | 7_4:-63013565 | Msa1169900:CDS |
| AGCATTTATCAAGGTTAGAT+AGG | 0.409294 | 7_4:-63012880 | Msa1169900:CDS |
| GATTATAGTGCTGGTGATAA+AGG | 0.421954 | 7_4:-63013334 | Msa1169900:CDS |
| TATAAGTACGGTAAGTGTAA+TGG | 0.430620 | 7_4:-63012998 | Msa1169900:CDS |
| GATGAGCGATATGAAGAAAC+TGG | 0.434304 | 7_4:-63013391 | Msa1169900:CDS |
| CGAGGCTGCTGAAATCTATA+CGG | 0.448201 | 7_4:-63011726 | Msa1169900:CDS |
| GATATTAGGCGCAATGTTAA+CGG | 0.449906 | 7_4:-63012956 | Msa1169900:CDS |
| GGGATACATGGTGGCTCAGA+AGG | 0.464555 | 7_4:-63012627 | Msa1169900:CDS |
| TAGTGAACACGGAGCCTAGC+TGG | 0.466097 | 7_4:+63012821 | None:intergenic |
| CGTGATGAAGGTGGAGGTGA+TGG | 0.467457 | 7_4:-63013217 | Msa1169900:CDS |
| GAAACATATCCGATCATTGT+TGG | 0.469215 | 7_4:-63013517 | Msa1169900:CDS |
| GAGATAAGAAGCATTTATCA+AGG | 0.475640 | 7_4:-63012889 | Msa1169900:CDS |
| GTAGATAAAGCACAGATTGA+TGG | 0.478198 | 7_4:-63012686 | Msa1169900:CDS |
| TGATTACGGTTCTACGGATG+TGG | 0.481654 | 7_4:-63013551 | Msa1169900:CDS |
| CAGCACAGGGGATGAAAACC+TGG | 0.488423 | 7_4:+63011775 | None:intergenic |
| TGTTCTGGTGATTATAGTGC+TGG | 0.489646 | 7_4:-63013343 | Msa1169900:CDS |
| CGCAGATGAGTTGTCAGCAC+AGG | 0.491267 | 7_4:+63011761 | None:intergenic |
| AAACATATCCGATCATTGTT+GGG | 0.491804 | 7_4:-63013516 | Msa1169900:CDS |
| GTAGAACCGTAATCATGTTC+CGG | 0.492886 | 7_4:+63013559 | None:intergenic |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 7_4:-63013098 | Msa1169900:CDS |
| GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 7_4:-63013109 | Msa1169900:CDS |
| GTGAAAGAAGAGATTATGAA+AGG | 0.507624 | 7_4:-63011686 | Msa1169900:CDS |
| GCTCAGAAGGGTGGATATCC+CGG | 0.515458 | 7_4:-63012614 | Msa1169900:CDS |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 7_4:-63013070 | Msa1169900:CDS |
| CCGATCATTGTTGGGAGTGG+TGG | 0.525336 | 7_4:-63013508 | Msa1169900:CDS |
| CGGTGTACCAAAATCAGTAA+AGG | 0.530148 | 7_4:+63013579 | None:intergenic |
| CCACCACTCCCAACAATGAT+CGG | 0.545431 | 7_4:+63013508 | None:intergenic |
| GGAACATGATTACGGTTCTA+CGG | 0.552732 | 7_4:-63013557 | Msa1169900:CDS |
| TTGTCATATAATGGGATACA+TGG | 0.555297 | 7_4:-63012639 | Msa1169900:CDS |
| TGTAAATGCACAGCATTGGT+TGG | 0.565762 | 7_4:+63012734 | None:intergenic |
| TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 7_4:-63013093 | Msa1169900:CDS |
| TACATGGTGGCTCAGAAGGG+TGG | 0.573659 | 7_4:-63012623 | Msa1169900:CDS |
| TATCCGATCATTGTTGGGAG+TGG | 0.573961 | 7_4:-63013511 | Msa1169900:CDS |
| GCAGATGAGTTGTCAGCACA+GGG | 0.575960 | 7_4:+63011762 | None:intergenic |
| GATGAAAGTGAAGGTGATGA+AGG | 0.577534 | 7_4:-63013244 | Msa1169900:CDS |
| AGGGTGTAAATGCACAGCAT+TGG | 0.584309 | 7_4:+63012730 | None:intergenic |
| GATGAAGGTGAACGTGATGA+AGG | 0.589312 | 7_4:-63013229 | Msa1169900:CDS |
| GATGAAGGTGAACGTGATGA+AGG | 0.589312 | 7_4:-63013274 | Msa1169900:CDS |
| GGTGATAAAGGTGAAGATGA+TGG | 0.589452 | 7_4:-63013322 | Msa1169900:CDS |
| GAAGGTGAACGTGATGAAGG+TGG | 0.592672 | 7_4:-63013226 | Msa1169900:CDS |
| GGAGACAATGAAAGTGATGA+TGG | 0.609236 | 7_4:-63013370 | Msa1169900:CDS |
| GGATACATGGTGGCTCAGAA+GGG | 0.612576 | 7_4:-63012626 | Msa1169900:CDS |
| AATCTGTGCTTTATCTACCT+CGG | 0.613894 | 7_4:+63012691 | None:intergenic |
| AGTGAAGGTCATGGTAGTGA+AGG | 0.614950 | 7_4:-63013148 | Msa1169900:CDS |
| TCTGCGTTGTCTTGAACGCG+AGG | 0.617404 | 7_4:-63011744 | Msa1169900:CDS |
| GATGAAAGTCAAGGTGATGA+AGG | 0.618015 | 7_4:-63013289 | Msa1169900:CDS |
| GGTGGAGGTGATGGAAGTGA+AGG | 0.621594 | 7_4:-63013208 | Msa1169900:CDS |
| TGCACAGCATTGGTTGGAGT+AGG | 0.638605 | 7_4:+63012740 | None:intergenic |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 7_4:-63012835 | Msa1169900:CDS |
| GGTGAACGTGATGAAGGTGG+AGG | 0.647603 | 7_4:-63013223 | Msa1169900:CDS |
| TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 7_4:-63013104 | Msa1169900:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 7_4:-63013157 | Msa1169900:CDS |
| TCATATAATGGGATACATGG+TGG | 0.669224 | 7_4:-63012636 | Msa1169900:CDS |
| GATGATGATGATGTGAGTCA+TGG | 0.679569 | 7_4:-63013448 | Msa1169900:intron |
| GGTGAACGTGATGAAGGTGA+AGG | 0.680195 | 7_4:-63013268 | Msa1169900:CDS |
| TTAACGGTGAGATTGTAATG+AGG | 0.680367 | 7_4:-63012940 | Msa1169900:CDS |
| AGGTGTTGCACTGAGTGTGA+AGG | 0.686205 | 7_4:-63011666 | Msa1169900:CDS |
| TGTTTATCGGAAAATATCCG+AGG | 0.704996 | 7_4:-63012708 | Msa1169900:CDS |
| GACAATGAAAGTGATGATGG+TGG | 0.706532 | 7_4:-63013367 | Msa1169900:CDS |
| ATTGATGGTCTTCAGTCACA+CGG | 0.708259 | 7_4:-63012671 | Msa1169900:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.739796 | 7_4:-63013193 | Msa1169900:intron |
| GGTGAAGGTGATGAAAGTGA+AGG | 0.739796 | 7_4:-63013253 | Msa1169900:CDS |
| AGTGAATGCGATGAAAGTCA+AGG | 0.740679 | 7_4:-63013298 | Msa1169900:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.741774 | 7_4:-63013163 | Msa1169900:intron |
| CAGATGAGTTGTCAGCACAG+GGG | 0.773409 | 7_4:+63011763 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACGATTTTTATTATAAGTA+CGG | - | chr7_4:63012246-63012265 | Msa1169900:intron | 15.0% |
| !!! | TACGATTTTTATTATAAGTA+CGG | - | chr7_4:63012246-63012265 | Msa1169900:intron | 15.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr7_4:63012608-63012627 | Msa1169900:intron | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr7_4:63012609-63012628 | Msa1169900:intron | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr7_4:63012608-63012627 | Msa1169900:intron | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr7_4:63012609-63012628 | Msa1169900:intron | 20.0% |
| ! | AATTATACGAAGAATACTCA+AGG | - | chr7_4:63011832-63011851 | Msa1169900:intron | 25.0% |
| ! | ATTATACGAAGAATACTCAA+GGG | - | chr7_4:63011833-63011852 | Msa1169900:intron | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr7_4:63012186-63012205 | Msa1169900:intron | 25.0% |
| !! | AAAAATGTGTGCTGTTATTA+AGG | - | chr7_4:63012707-63012726 | Msa1169900:CDS | 25.0% |
| ! | CTTAACATTCAGATAGTTTA+GGG | + | chr7_4:63012751-63012770 | None:intergenic | 25.0% |
| ! | ACTTAACATTCAGATAGTTT+AGG | + | chr7_4:63012752-63012771 | None:intergenic | 25.0% |
| !!! | AACGTTTGAAATGTCTATTT+TGG | - | chr7_4:63012820-63012839 | Msa1169900:CDS | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | - | chr7_4:63012821-63012840 | Msa1169900:CDS | 25.0% |
| ! | AAACAATAGACACTTATATG+TGG | - | chr7_4:63013003-63013022 | Msa1169900:CDS | 25.0% |
| ! | AACAATAGACACTTATATGT+GGG | - | chr7_4:63013004-63013023 | Msa1169900:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | - | chr7_4:63013217-63013236 | Msa1169900:CDS | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | + | chr7_4:63013312-63013331 | None:intergenic | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | - | chr7_4:63013316-63013335 | Msa1169900:CDS | 25.0% |
| ! | AATTATACGAAGAATACTCA+AGG | - | chr7_4:63011832-63011851 | Msa1169900:intron | 25.0% |
| ! | ATTATACGAAGAATACTCAA+GGG | - | chr7_4:63011833-63011852 | Msa1169900:intron | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr7_4:63012186-63012205 | Msa1169900:intron | 25.0% |
| !! | AAAAATGTGTGCTGTTATTA+AGG | - | chr7_4:63012707-63012726 | Msa1169900:CDS | 25.0% |
| ! | CTTAACATTCAGATAGTTTA+GGG | + | chr7_4:63012751-63012770 | None:intergenic | 25.0% |
| ! | ACTTAACATTCAGATAGTTT+AGG | + | chr7_4:63012752-63012771 | None:intergenic | 25.0% |
| !!! | AACGTTTGAAATGTCTATTT+TGG | - | chr7_4:63012820-63012839 | Msa1169900:CDS | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | - | chr7_4:63012821-63012840 | Msa1169900:CDS | 25.0% |
| ! | AAACAATAGACACTTATATG+TGG | - | chr7_4:63013003-63013022 | Msa1169900:CDS | 25.0% |
| ! | AACAATAGACACTTATATGT+GGG | - | chr7_4:63013004-63013023 | Msa1169900:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | - | chr7_4:63013217-63013236 | Msa1169900:CDS | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | + | chr7_4:63013312-63013331 | None:intergenic | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | - | chr7_4:63013316-63013335 | Msa1169900:CDS | 25.0% |
| !!! | AACAATGCCTTTACTGATTT+TGG | - | chr7_4:63011670-63011689 | Msa1169900:CDS | 30.0% |
| AAACATATCCGATCATTGTT+GGG | - | chr7_4:63011740-63011759 | Msa1169900:CDS | 30.0% | |
| TATAAGTACGGTAAGTGTAA+TGG | - | chr7_4:63012258-63012277 | Msa1169900:intron | 30.0% | |
| !! | GAGATAAGAAGCATTTATCA+AGG | - | chr7_4:63012367-63012386 | Msa1169900:intron | 30.0% |
| AGCATTTATCAAGGTTAGAT+AGG | - | chr7_4:63012376-63012395 | Msa1169900:intron | 30.0% | |
| ! | ACAACATATCTACCCTTTTT+GGG | + | chr7_4:63012465-63012484 | None:intergenic | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr7_4:63012479-63012498 | Msa1169900:intron | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr7_4:63012480-63012499 | Msa1169900:intron | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | - | chr7_4:63012617-63012636 | Msa1169900:CDS | 30.0% |
| GAATATTCACAAAAGGAATG+TGG | + | chr7_4:63012786-63012805 | None:intergenic | 30.0% | |
| !! | AGATCAGATTATTTCTGCTT+TGG | - | chr7_4:63012858-63012877 | Msa1169900:CDS | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | + | chr7_4:63012962-63012981 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | chr7_4:63012960-63012979 | Msa1169900:CDS | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | - | chr7_4:63013032-63013051 | Msa1169900:CDS | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | - | chr7_4:63013181-63013200 | Msa1169900:intron | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | - | chr7_4:63013185-63013204 | Msa1169900:intron | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | - | chr7_4:63013220-63013239 | Msa1169900:CDS | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | - | chr7_4:63013240-63013259 | Msa1169900:CDS | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | - | chr7_4:63013241-63013260 | Msa1169900:CDS | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | chr7_4:63013242-63013261 | Msa1169900:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr7_4:63013243-63013262 | Msa1169900:CDS | 30.0% |
| CATATGAGAACAAAGAATTG+TGG | - | chr7_4:63013315-63013334 | Msa1169900:CDS | 30.0% | |
| !! | TTGTAGCTGATTTTAAATCC+AGG | - | chr7_4:63013463-63013482 | Msa1169900:CDS | 30.0% |
| GTGAAAGAAGAGATTATGAA+AGG | - | chr7_4:63013570-63013589 | Msa1169900:CDS | 30.0% | |
| !!! | AACAATGCCTTTACTGATTT+TGG | - | chr7_4:63011670-63011689 | Msa1169900:CDS | 30.0% |
| AAACATATCCGATCATTGTT+GGG | - | chr7_4:63011740-63011759 | Msa1169900:CDS | 30.0% | |
| TATAAGTACGGTAAGTGTAA+TGG | - | chr7_4:63012258-63012277 | Msa1169900:intron | 30.0% | |
| !! | GAGATAAGAAGCATTTATCA+AGG | - | chr7_4:63012367-63012386 | Msa1169900:intron | 30.0% |
| AGCATTTATCAAGGTTAGAT+AGG | - | chr7_4:63012376-63012395 | Msa1169900:intron | 30.0% | |
| ! | ACAACATATCTACCCTTTTT+GGG | + | chr7_4:63012465-63012484 | None:intergenic | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr7_4:63012479-63012498 | Msa1169900:intron | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr7_4:63012480-63012499 | Msa1169900:intron | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | - | chr7_4:63012617-63012636 | Msa1169900:CDS | 30.0% |
| GAATATTCACAAAAGGAATG+TGG | + | chr7_4:63012786-63012805 | None:intergenic | 30.0% | |
| !! | AGATCAGATTATTTCTGCTT+TGG | - | chr7_4:63012858-63012877 | Msa1169900:CDS | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | + | chr7_4:63012962-63012981 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | chr7_4:63012960-63012979 | Msa1169900:CDS | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | - | chr7_4:63013032-63013051 | Msa1169900:CDS | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | - | chr7_4:63013181-63013200 | Msa1169900:intron | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | - | chr7_4:63013185-63013204 | Msa1169900:intron | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | - | chr7_4:63013220-63013239 | Msa1169900:CDS | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | - | chr7_4:63013240-63013259 | Msa1169900:CDS | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | - | chr7_4:63013241-63013260 | Msa1169900:CDS | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | chr7_4:63013242-63013261 | Msa1169900:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr7_4:63013243-63013262 | Msa1169900:CDS | 30.0% |
| CATATGAGAACAAAGAATTG+TGG | - | chr7_4:63013315-63013334 | Msa1169900:CDS | 30.0% | |
| !! | TTGTAGCTGATTTTAAATCC+AGG | - | chr7_4:63013463-63013482 | Msa1169900:CDS | 30.0% |
| GTGAAAGAAGAGATTATGAA+AGG | - | chr7_4:63013570-63013589 | Msa1169900:CDS | 30.0% | |
| !!! | CTTTACTGATTTTGGTACAC+CGG | - | chr7_4:63011678-63011697 | Msa1169900:CDS | 35.0% |
| GAAACATATCCGATCATTGT+TGG | - | chr7_4:63011739-63011758 | Msa1169900:CDS | 35.0% | |
| AAGAATACTCAAGGGAATAC+AGG | - | chr7_4:63011841-63011860 | Msa1169900:intron | 35.0% | |
| !! | GATTATAGTGCTGGTGATAA+AGG | - | chr7_4:63011922-63011941 | Msa1169900:intron | 35.0% |
| ! | GAAGATGATGATGTAGTTGT+TGG | - | chr7_4:63012147-63012166 | Msa1169900:intron | 35.0% |
| CATTAACTGCTGAAGGAATA+AGG | - | chr7_4:63012193-63012212 | Msa1169900:intron | 35.0% | |
| TGCTGAAGGAATAAGGAAAA+TGG | - | chr7_4:63012200-63012219 | Msa1169900:intron | 35.0% | |
| !!! | AGTGTAATGGTTTTGCTGTT+AGG | - | chr7_4:63012271-63012290 | Msa1169900:intron | 35.0% |
| CTGTTAGGAAGAGTGATATT+AGG | - | chr7_4:63012286-63012305 | Msa1169900:intron | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | - | chr7_4:63012300-63012319 | Msa1169900:intron | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | chr7_4:63012316-63012335 | Msa1169900:intron | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | + | chr7_4:63012466-63012485 | None:intergenic | 35.0% |
| TGCATTTACACCCTGTTTAT+CGG | - | chr7_4:63012535-63012554 | Msa1169900:intron | 35.0% | |
| ! | CGGATATTTTCCGATAAACA+GGG | + | chr7_4:63012548-63012567 | None:intergenic | 35.0% |
| ! | TCGGATATTTTCCGATAAAC+AGG | + | chr7_4:63012549-63012568 | None:intergenic | 35.0% |
| TGTTTATCGGAAAATATCCG+AGG | - | chr7_4:63012548-63012567 | Msa1169900:intron | 35.0% | |
| AATCTGTGCTTTATCTACCT+CGG | + | chr7_4:63012568-63012587 | None:intergenic | 35.0% | |
| GTAGATAAAGCACAGATTGA+TGG | - | chr7_4:63012570-63012589 | Msa1169900:intron | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | - | chr7_4:63012620-63012639 | Msa1169900:CDS | 35.0% |
| ! | ATGTGTGCTGTTATTAAGGA+TGG | - | chr7_4:63012711-63012730 | Msa1169900:CDS | 35.0% |
| AGTGGCAGAATATTCACAAA+AGG | + | chr7_4:63012793-63012812 | None:intergenic | 35.0% | |
| !! | AAATGTCTATTTTGGGCAGA+TGG | - | chr7_4:63012828-63012847 | Msa1169900:CDS | 35.0% |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr7_4:63012971-63012990 | Msa1169900:CDS | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | - | chr7_4:63013031-63013050 | Msa1169900:CDS | 35.0% |
| TCCCATACAATCTAGAAAAC+TGG | + | chr7_4:63013036-63013055 | None:intergenic | 35.0% | |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | - | chr7_4:63013244-63013263 | Msa1169900:CDS | 35.0% |
| ATGGAATTGAGAACAATCCA+TGG | - | chr7_4:63013282-63013301 | Msa1169900:CDS | 35.0% | |
| TGGAATTGAGAACAATCCAT+GGG | - | chr7_4:63013283-63013302 | Msa1169900:CDS | 35.0% | |
| !!! | TCATATGTTTTGGTAACCCA+TGG | + | chr7_4:63013302-63013321 | None:intergenic | 35.0% |
| !! | ATTTCTGCACAATTTTGACG+AGG | - | chr7_4:63013413-63013432 | Msa1169900:intron | 35.0% |
| !!! | CTTTACTGATTTTGGTACAC+CGG | - | chr7_4:63011678-63011697 | Msa1169900:CDS | 35.0% |
| GAAACATATCCGATCATTGT+TGG | - | chr7_4:63011739-63011758 | Msa1169900:CDS | 35.0% | |
| AAGAATACTCAAGGGAATAC+AGG | - | chr7_4:63011841-63011860 | Msa1169900:intron | 35.0% | |
| !! | GATTATAGTGCTGGTGATAA+AGG | - | chr7_4:63011922-63011941 | Msa1169900:intron | 35.0% |
| ! | GAAGATGATGATGTAGTTGT+TGG | - | chr7_4:63012147-63012166 | Msa1169900:intron | 35.0% |
| CATTAACTGCTGAAGGAATA+AGG | - | chr7_4:63012193-63012212 | Msa1169900:intron | 35.0% | |
| TGCTGAAGGAATAAGGAAAA+TGG | - | chr7_4:63012200-63012219 | Msa1169900:intron | 35.0% | |
| !!! | AGTGTAATGGTTTTGCTGTT+AGG | - | chr7_4:63012271-63012290 | Msa1169900:intron | 35.0% |
| CTGTTAGGAAGAGTGATATT+AGG | - | chr7_4:63012286-63012305 | Msa1169900:intron | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | - | chr7_4:63012300-63012319 | Msa1169900:intron | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | chr7_4:63012316-63012335 | Msa1169900:intron | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | + | chr7_4:63012466-63012485 | None:intergenic | 35.0% |
| TGCATTTACACCCTGTTTAT+CGG | - | chr7_4:63012535-63012554 | Msa1169900:intron | 35.0% | |
| ! | CGGATATTTTCCGATAAACA+GGG | + | chr7_4:63012548-63012567 | None:intergenic | 35.0% |
| ! | TCGGATATTTTCCGATAAAC+AGG | + | chr7_4:63012549-63012568 | None:intergenic | 35.0% |
| TGTTTATCGGAAAATATCCG+AGG | - | chr7_4:63012548-63012567 | Msa1169900:intron | 35.0% | |
| AATCTGTGCTTTATCTACCT+CGG | + | chr7_4:63012568-63012587 | None:intergenic | 35.0% | |
| GTAGATAAAGCACAGATTGA+TGG | - | chr7_4:63012570-63012589 | Msa1169900:intron | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | - | chr7_4:63012620-63012639 | Msa1169900:CDS | 35.0% |
| ! | ATGTGTGCTGTTATTAAGGA+TGG | - | chr7_4:63012711-63012730 | Msa1169900:CDS | 35.0% |
| AGTGGCAGAATATTCACAAA+AGG | + | chr7_4:63012793-63012812 | None:intergenic | 35.0% | |
| !! | AAATGTCTATTTTGGGCAGA+TGG | - | chr7_4:63012828-63012847 | Msa1169900:CDS | 35.0% |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr7_4:63012971-63012990 | Msa1169900:CDS | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | - | chr7_4:63013031-63013050 | Msa1169900:CDS | 35.0% |
| TCCCATACAATCTAGAAAAC+TGG | + | chr7_4:63013036-63013055 | None:intergenic | 35.0% | |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | - | chr7_4:63013244-63013263 | Msa1169900:CDS | 35.0% |
| ATGGAATTGAGAACAATCCA+TGG | - | chr7_4:63013282-63013301 | Msa1169900:CDS | 35.0% | |
| TGGAATTGAGAACAATCCAT+GGG | - | chr7_4:63013283-63013302 | Msa1169900:CDS | 35.0% | |
| !!! | TCATATGTTTTGGTAACCCA+TGG | + | chr7_4:63013302-63013321 | None:intergenic | 35.0% |
| !! | ATTTCTGCACAATTTTGACG+AGG | - | chr7_4:63013413-63013432 | Msa1169900:intron | 35.0% |
| CGGTGTACCAAAATCAGTAA+AGG | + | chr7_4:63011680-63011699 | None:intergenic | 40.0% | |
| GTAGAACCGTAATCATGTTC+CGG | + | chr7_4:63011700-63011719 | None:intergenic | 40.0% | |
| GGAACATGATTACGGTTCTA+CGG | - | chr7_4:63011699-63011718 | Msa1169900:CDS | 40.0% | |
| ! | GATGATGATGATGTGAGTCA+TGG | - | chr7_4:63011808-63011827 | Msa1169900:CDS | 40.0% |
| GATGAGCGATATGAAGAAAC+TGG | - | chr7_4:63011865-63011884 | Msa1169900:intron | 40.0% | |
| GGAGACAATGAAAGTGATGA+TGG | - | chr7_4:63011886-63011905 | Msa1169900:intron | 40.0% | |
| !! | GACAATGAAAGTGATGATGG+TGG | - | chr7_4:63011889-63011908 | Msa1169900:intron | 40.0% |
| TGTTCTGGTGATTATAGTGC+TGG | - | chr7_4:63011913-63011932 | Msa1169900:intron | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | - | chr7_4:63011934-63011953 | Msa1169900:intron | 40.0% | |
| AGTGAATGCGATGAAAGTCA+AGG | - | chr7_4:63011958-63011977 | Msa1169900:intron | 40.0% | |
| GATGAAAGTCAAGGTGATGA+AGG | - | chr7_4:63011967-63011986 | Msa1169900:intron | 40.0% | |
| GATGAAAGTGAAGGTGATGA+AGG | - | chr7_4:63012012-63012031 | Msa1169900:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr7_4:63012063-63012082 | Msa1169900:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr7_4:63012063-63012082 | Msa1169900:intron | 40.0% | |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr7_4:63012152-63012171 | Msa1169900:intron | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr7_4:63012158-63012177 | Msa1169900:intron | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr7_4:63012163-63012182 | Msa1169900:intron | 40.0% |
| CAGTATGTATGCAACAAGCA+GGG | - | chr7_4:63012339-63012358 | Msa1169900:intron | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | - | chr7_4:63012340-63012359 | Msa1169900:intron | 40.0% | |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | + | chr7_4:63012449-63012468 | None:intergenic | 40.0% |
| TGTTCACTACAGACCCAAAA+AGG | - | chr7_4:63012449-63012468 | Msa1169900:intron | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | chr7_4:63012450-63012469 | Msa1169900:intron | 40.0% | |
| !! | TGTAAATGCACAGCATTGGT+TGG | + | chr7_4:63012525-63012544 | None:intergenic | 40.0% |
| ! | ATTGATGGTCTTCAGTCACA+CGG | - | chr7_4:63012585-63012604 | Msa1169900:intron | 40.0% |
| TTTCTTAGTGAACCCAACAC+CGG | + | chr7_4:63012664-63012683 | None:intergenic | 40.0% | |
| AAAGGAATGTGGATCAGTTG+AGG | + | chr7_4:63012775-63012794 | None:intergenic | 40.0% | |
| TTTCAAACGTTCGTCATCAG+TGG | + | chr7_4:63012811-63012830 | None:intergenic | 40.0% | |
| !! | TTATTTCTGCTTTGGCGATG+TGG | - | chr7_4:63012866-63012885 | Msa1169900:CDS | 40.0% |
| GAACAAATACCACTATCCGT+TGG | - | chr7_4:63012914-63012933 | Msa1169900:intron | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | chr7_4:63012926-63012945 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | chr7_4:63012927-63012946 | Msa1169900:intron | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | chr7_4:63013068-63013087 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | - | chr7_4:63013065-63013084 | Msa1169900:CDS | 40.0% | |
| GCATCTGAACAAGAATGCTA+TGG | - | chr7_4:63013154-63013173 | Msa1169900:CDS | 40.0% | |
| !! | AATTTTGACGAGGCAATGAG+AGG | - | chr7_4:63013423-63013442 | Msa1169900:intron | 40.0% |
| CGGTGTACCAAAATCAGTAA+AGG | + | chr7_4:63011680-63011699 | None:intergenic | 40.0% | |
| GTAGAACCGTAATCATGTTC+CGG | + | chr7_4:63011700-63011719 | None:intergenic | 40.0% | |
| GGAACATGATTACGGTTCTA+CGG | - | chr7_4:63011699-63011718 | Msa1169900:CDS | 40.0% | |
| ! | GATGATGATGATGTGAGTCA+TGG | - | chr7_4:63011808-63011827 | Msa1169900:CDS | 40.0% |
| GATGAGCGATATGAAGAAAC+TGG | - | chr7_4:63011865-63011884 | Msa1169900:intron | 40.0% | |
| GGAGACAATGAAAGTGATGA+TGG | - | chr7_4:63011886-63011905 | Msa1169900:intron | 40.0% | |
| !! | GACAATGAAAGTGATGATGG+TGG | - | chr7_4:63011889-63011908 | Msa1169900:intron | 40.0% |
| TGTTCTGGTGATTATAGTGC+TGG | - | chr7_4:63011913-63011932 | Msa1169900:intron | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | - | chr7_4:63011934-63011953 | Msa1169900:intron | 40.0% | |
| AGTGAATGCGATGAAAGTCA+AGG | - | chr7_4:63011958-63011977 | Msa1169900:intron | 40.0% | |
| GATGAAAGTCAAGGTGATGA+AGG | - | chr7_4:63011967-63011986 | Msa1169900:intron | 40.0% | |
| GATGAAAGTGAAGGTGATGA+AGG | - | chr7_4:63012012-63012031 | Msa1169900:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr7_4:63012063-63012082 | Msa1169900:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr7_4:63012063-63012082 | Msa1169900:intron | 40.0% | |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr7_4:63012152-63012171 | Msa1169900:intron | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr7_4:63012158-63012177 | Msa1169900:intron | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr7_4:63012163-63012182 | Msa1169900:intron | 40.0% |
| CAGTATGTATGCAACAAGCA+GGG | - | chr7_4:63012339-63012358 | Msa1169900:intron | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | - | chr7_4:63012340-63012359 | Msa1169900:intron | 40.0% | |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | + | chr7_4:63012449-63012468 | None:intergenic | 40.0% |
| TGTTCACTACAGACCCAAAA+AGG | - | chr7_4:63012449-63012468 | Msa1169900:intron | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | chr7_4:63012450-63012469 | Msa1169900:intron | 40.0% | |
| !! | TGTAAATGCACAGCATTGGT+TGG | + | chr7_4:63012525-63012544 | None:intergenic | 40.0% |
| ! | ATTGATGGTCTTCAGTCACA+CGG | - | chr7_4:63012585-63012604 | Msa1169900:intron | 40.0% |
| TTTCTTAGTGAACCCAACAC+CGG | + | chr7_4:63012664-63012683 | None:intergenic | 40.0% | |
| AAAGGAATGTGGATCAGTTG+AGG | + | chr7_4:63012775-63012794 | None:intergenic | 40.0% | |
| TTTCAAACGTTCGTCATCAG+TGG | + | chr7_4:63012811-63012830 | None:intergenic | 40.0% | |
| !! | TTATTTCTGCTTTGGCGATG+TGG | - | chr7_4:63012866-63012885 | Msa1169900:CDS | 40.0% |
| GAACAAATACCACTATCCGT+TGG | - | chr7_4:63012914-63012933 | Msa1169900:intron | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | chr7_4:63012926-63012945 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | chr7_4:63012927-63012946 | Msa1169900:intron | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | chr7_4:63013068-63013087 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | - | chr7_4:63013065-63013084 | Msa1169900:CDS | 40.0% | |
| GCATCTGAACAAGAATGCTA+TGG | - | chr7_4:63013154-63013173 | Msa1169900:CDS | 40.0% | |
| !! | AATTTTGACGAGGCAATGAG+AGG | - | chr7_4:63013423-63013442 | Msa1169900:intron | 40.0% |
| GGTACACCGGAACATGATTA+CGG | - | chr7_4:63011691-63011710 | Msa1169900:CDS | 45.0% | |
| TGATTACGGTTCTACGGATG+TGG | - | chr7_4:63011705-63011724 | Msa1169900:CDS | 45.0% | |
| TATCCGATCATTGTTGGGAG+TGG | - | chr7_4:63011745-63011764 | Msa1169900:CDS | 45.0% | |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr7_4:63011898-63011917 | Msa1169900:intron | 45.0% |
| GATGAAGGTGAACGTGATGA+AGG | - | chr7_4:63011982-63012001 | Msa1169900:intron | 45.0% | |
| GGTGAAGGTGATGAAAGTGA+AGG | - | chr7_4:63012003-63012022 | Msa1169900:intron | 45.0% | |
| GATGAAGGTGAACGTGATGA+AGG | - | chr7_4:63011982-63012001 | Msa1169900:intron | 45.0% | |
| AGTGAAGGTCATGCTAGTGA+AGG | - | chr7_4:63012078-63012097 | Msa1169900:intron | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr7_4:63012069-63012088 | Msa1169900:intron | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | - | chr7_4:63012108-63012127 | Msa1169900:intron | 45.0% |
| GCAGTATGTATGCAACAAGC+AGG | - | chr7_4:63012338-63012357 | Msa1169900:intron | 45.0% | |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | + | chr7_4:63012512-63012531 | None:intergenic | 45.0% |
| AGGGTGTAAATGCACAGCAT+TGG | + | chr7_4:63012529-63012548 | None:intergenic | 45.0% | |
| TTCTTAGTGAACCCAACACC+GGG | + | chr7_4:63012663-63012682 | None:intergenic | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | chr7_4:63012933-63012952 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr7_4:63012977-63012996 | Msa1169900:CDS | 45.0% |
| GCAGTTGTAACAGATGGTGA+CGG | - | chr7_4:63013071-63013090 | Msa1169900:CDS | 45.0% | |
| !! | AGATGGTGACGGTTCTATGA+GGG | - | chr7_4:63013082-63013101 | Msa1169900:CDS | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | - | chr7_4:63013094-63013113 | Msa1169900:CDS | 45.0% | |
| TACGTGCGTGACGATTTCTT+TGG | - | chr7_4:63013347-63013366 | Msa1169900:CDS | 45.0% | |
| ACTACGTCTGCGTTGAATTG+TGG | - | chr7_4:63013380-63013399 | Msa1169900:CDS | 45.0% | |
| CTACGTCTGCGTTGAATTGT+GGG | - | chr7_4:63013381-63013400 | Msa1169900:CDS | 45.0% | |
| CGAGGCTGCTGAAATCTATA+CGG | - | chr7_4:63013530-63013549 | Msa1169900:CDS | 45.0% | |
| GGTACACCGGAACATGATTA+CGG | - | chr7_4:63011691-63011710 | Msa1169900:CDS | 45.0% | |
| TGATTACGGTTCTACGGATG+TGG | - | chr7_4:63011705-63011724 | Msa1169900:CDS | 45.0% | |
| TATCCGATCATTGTTGGGAG+TGG | - | chr7_4:63011745-63011764 | Msa1169900:CDS | 45.0% | |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr7_4:63011898-63011917 | Msa1169900:intron | 45.0% |
| GATGAAGGTGAACGTGATGA+AGG | - | chr7_4:63011982-63012001 | Msa1169900:intron | 45.0% | |
| GGTGAAGGTGATGAAAGTGA+AGG | - | chr7_4:63012003-63012022 | Msa1169900:intron | 45.0% | |
| GATGAAGGTGAACGTGATGA+AGG | - | chr7_4:63011982-63012001 | Msa1169900:intron | 45.0% | |
| AGTGAAGGTCATGCTAGTGA+AGG | - | chr7_4:63012078-63012097 | Msa1169900:intron | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr7_4:63012069-63012088 | Msa1169900:intron | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | - | chr7_4:63012108-63012127 | Msa1169900:intron | 45.0% |
| GCAGTATGTATGCAACAAGC+AGG | - | chr7_4:63012338-63012357 | Msa1169900:intron | 45.0% | |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | + | chr7_4:63012512-63012531 | None:intergenic | 45.0% |
| AGGGTGTAAATGCACAGCAT+TGG | + | chr7_4:63012529-63012548 | None:intergenic | 45.0% | |
| TTCTTAGTGAACCCAACACC+GGG | + | chr7_4:63012663-63012682 | None:intergenic | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | chr7_4:63012933-63012952 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr7_4:63012977-63012996 | Msa1169900:CDS | 45.0% |
| GCAGTTGTAACAGATGGTGA+CGG | - | chr7_4:63013071-63013090 | Msa1169900:CDS | 45.0% | |
| !! | AGATGGTGACGGTTCTATGA+GGG | - | chr7_4:63013082-63013101 | Msa1169900:CDS | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | - | chr7_4:63013094-63013113 | Msa1169900:CDS | 45.0% | |
| TACGTGCGTGACGATTTCTT+TGG | - | chr7_4:63013347-63013366 | Msa1169900:CDS | 45.0% | |
| ACTACGTCTGCGTTGAATTG+TGG | - | chr7_4:63013380-63013399 | Msa1169900:CDS | 45.0% | |
| CTACGTCTGCGTTGAATTGT+GGG | - | chr7_4:63013381-63013400 | Msa1169900:CDS | 45.0% | |
| CGAGGCTGCTGAAATCTATA+CGG | - | chr7_4:63013530-63013549 | Msa1169900:CDS | 45.0% | |
| CCACCACTCCCAACAATGAT+CGG | + | chr7_4:63011751-63011770 | None:intergenic | 50.0% | |
| GGTGAACGTGATGAAGGTGA+AGG | - | chr7_4:63011988-63012007 | Msa1169900:intron | 50.0% | |
| GAAGGTGAACGTGATGAAGG+TGG | - | chr7_4:63011985-63012004 | Msa1169900:intron | 50.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr7_4:63012421-63012440 | Msa1169900:intron | 50.0% |
| !! | TGCACAGCATTGGTTGGAGT+AGG | + | chr7_4:63012519-63012538 | None:intergenic | 50.0% |
| GGATACATGGTGGCTCAGAA+GGG | - | chr7_4:63012630-63012649 | Msa1169900:CDS | 50.0% | |
| !! | CAGATGGTGACGGTTCTATG+AGG | - | chr7_4:63013081-63013100 | Msa1169900:CDS | 50.0% |
| TATGAGGGAGGCGATAAAGG+CGG | - | chr7_4:63013097-63013116 | Msa1169900:CDS | 50.0% | |
| CATAGACGATGACGCGTACT+TGG | + | chr7_4:63013128-63013147 | None:intergenic | 50.0% | |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | - | chr7_4:63013250-63013269 | Msa1169900:CDS | 50.0% |
| GTGCGTGACGATTTCTTTGG+TGG | - | chr7_4:63013350-63013369 | Msa1169900:CDS | 50.0% | |
| CAGATGAGTTGTCAGCACAG+GGG | + | chr7_4:63013496-63013515 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | + | chr7_4:63013497-63013516 | None:intergenic | 50.0% | |
| ! | AGGTGTTGCACTGAGTGTGA+AGG | - | chr7_4:63013590-63013609 | Msa1169900:CDS | 50.0% |
| CCACCACTCCCAACAATGAT+CGG | + | chr7_4:63011751-63011770 | None:intergenic | 50.0% | |
| GGTGAACGTGATGAAGGTGA+AGG | - | chr7_4:63011988-63012007 | Msa1169900:intron | 50.0% | |
| GAAGGTGAACGTGATGAAGG+TGG | - | chr7_4:63011985-63012004 | Msa1169900:intron | 50.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr7_4:63012421-63012440 | Msa1169900:intron | 50.0% |
| !! | TGCACAGCATTGGTTGGAGT+AGG | + | chr7_4:63012519-63012538 | None:intergenic | 50.0% |
| GGATACATGGTGGCTCAGAA+GGG | - | chr7_4:63012630-63012649 | Msa1169900:CDS | 50.0% | |
| !! | CAGATGGTGACGGTTCTATG+AGG | - | chr7_4:63013081-63013100 | Msa1169900:CDS | 50.0% |
| TATGAGGGAGGCGATAAAGG+CGG | - | chr7_4:63013097-63013116 | Msa1169900:CDS | 50.0% | |
| CATAGACGATGACGCGTACT+TGG | + | chr7_4:63013128-63013147 | None:intergenic | 50.0% | |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | - | chr7_4:63013250-63013269 | Msa1169900:CDS | 50.0% |
| GTGCGTGACGATTTCTTTGG+TGG | - | chr7_4:63013350-63013369 | Msa1169900:CDS | 50.0% | |
| CAGATGAGTTGTCAGCACAG+GGG | + | chr7_4:63013496-63013515 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | + | chr7_4:63013497-63013516 | None:intergenic | 50.0% | |
| ! | AGGTGTTGCACTGAGTGTGA+AGG | - | chr7_4:63013590-63013609 | Msa1169900:CDS | 50.0% |
| CCGATCATTGTTGGGAGTGG+TGG | - | chr7_4:63011748-63011767 | Msa1169900:CDS | 55.0% | |
| GGTGAACGTGATGAAGGTGG+AGG | - | chr7_4:63012033-63012052 | Msa1169900:intron | 55.0% | |
| CGTGATGAAGGTGGAGGTGA+TGG | - | chr7_4:63012039-63012058 | Msa1169900:intron | 55.0% | |
| !! | GGTGGAGGTGATGGAAGTGA+AGG | - | chr7_4:63012048-63012067 | Msa1169900:intron | 55.0% |
| TAGTGAACACGGAGCCTAGC+TGG | + | chr7_4:63012438-63012457 | None:intergenic | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | - | chr7_4:63012629-63012648 | Msa1169900:CDS | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | - | chr7_4:63012633-63012652 | Msa1169900:CDS | 55.0% | |
| GCTCAGAAGGGTGGATATCC+CGG | - | chr7_4:63012642-63012661 | Msa1169900:CDS | 55.0% | |
| AAGGGTGGATATCCCGGTGT+TGG | - | chr7_4:63012648-63012667 | Msa1169900:CDS | 55.0% | |
| AGGGTGGATATCCCGGTGTT+GGG | - | chr7_4:63012649-63012668 | Msa1169900:CDS | 55.0% | |
| !! | TGGTGACGGTTCTATGAGGG+AGG | - | chr7_4:63013085-63013104 | Msa1169900:CDS | 55.0% |
| CGCGTCATCGTCTATGTGCT+TGG | - | chr7_4:63013132-63013151 | Msa1169900:CDS | 55.0% | |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | - | chr7_4:63013255-63013274 | Msa1169900:CDS | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | - | chr7_4:63013256-63013275 | Msa1169900:CDS | 55.0% |
| !! | GGGGACTTGGTGAGGGAAAA+TGG | - | chr7_4:63013263-63013282 | Msa1169900:CDS | 55.0% |
| CAGCACAGGGGATGAAAACC+TGG | + | chr7_4:63013484-63013503 | None:intergenic | 55.0% | |
| CGCAGATGAGTTGTCAGCAC+AGG | + | chr7_4:63013498-63013517 | None:intergenic | 55.0% | |
| TCTGCGTTGTCTTGAACGCG+AGG | - | chr7_4:63013512-63013531 | Msa1169900:CDS | 55.0% | |
| CCGATCATTGTTGGGAGTGG+TGG | - | chr7_4:63011748-63011767 | Msa1169900:CDS | 55.0% | |
| GGTGAACGTGATGAAGGTGG+AGG | - | chr7_4:63012033-63012052 | Msa1169900:intron | 55.0% | |
| CGTGATGAAGGTGGAGGTGA+TGG | - | chr7_4:63012039-63012058 | Msa1169900:intron | 55.0% | |
| !! | GGTGGAGGTGATGGAAGTGA+AGG | - | chr7_4:63012048-63012067 | Msa1169900:intron | 55.0% |
| TAGTGAACACGGAGCCTAGC+TGG | + | chr7_4:63012438-63012457 | None:intergenic | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | - | chr7_4:63012629-63012648 | Msa1169900:CDS | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | - | chr7_4:63012633-63012652 | Msa1169900:CDS | 55.0% | |
| GCTCAGAAGGGTGGATATCC+CGG | - | chr7_4:63012642-63012661 | Msa1169900:CDS | 55.0% | |
| AAGGGTGGATATCCCGGTGT+TGG | - | chr7_4:63012648-63012667 | Msa1169900:CDS | 55.0% | |
| AGGGTGGATATCCCGGTGTT+GGG | - | chr7_4:63012649-63012668 | Msa1169900:CDS | 55.0% | |
| !! | TGGTGACGGTTCTATGAGGG+AGG | - | chr7_4:63013085-63013104 | Msa1169900:CDS | 55.0% |
| CGCGTCATCGTCTATGTGCT+TGG | - | chr7_4:63013132-63013151 | Msa1169900:CDS | 55.0% | |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | - | chr7_4:63013255-63013274 | Msa1169900:CDS | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | - | chr7_4:63013256-63013275 | Msa1169900:CDS | 55.0% |
| !! | GGGGACTTGGTGAGGGAAAA+TGG | - | chr7_4:63013263-63013282 | Msa1169900:CDS | 55.0% |
| CAGCACAGGGGATGAAAACC+TGG | + | chr7_4:63013484-63013503 | None:intergenic | 55.0% | |
| CGCAGATGAGTTGTCAGCAC+AGG | + | chr7_4:63013498-63013517 | None:intergenic | 55.0% | |
| TCTGCGTTGTCTTGAACGCG+AGG | - | chr7_4:63013512-63013531 | Msa1169900:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 63011658 | 63013620 | 63011658 | ID=Msa1169900;Name=Msa1169900 |
| chr7_4 | mRNA | 63011658 | 63013620 | 63011658 | ID=Msa1169900-mRNA-1;Parent=Msa1169900;Name=Msa1169900-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|0.6|0.66|6|0|368 |
| chr7_4 | exon | 63013449 | 63013620 | 63013449 | ID=Msa1169900-mRNA-1:exon:20127;Parent=Msa1169900-mRNA-1 |
| chr7_4 | exon | 63013194 | 63013415 | 63013194 | ID=Msa1169900-mRNA-1:exon:20126;Parent=Msa1169900-mRNA-1 |
| chr7_4 | exon | 63012934 | 63013178 | 63012934 | ID=Msa1169900-mRNA-1:exon:20125;Parent=Msa1169900-mRNA-1 |
| chr7_4 | exon | 63012807 | 63012918 | 63012807 | ID=Msa1169900-mRNA-1:exon:20124;Parent=Msa1169900-mRNA-1 |
| chr7_4 | exon | 63012613 | 63012779 | 63012613 | ID=Msa1169900-mRNA-1:exon:20123;Parent=Msa1169900-mRNA-1 |
| chr7_4 | exon | 63011658 | 63011843 | 63011658 | ID=Msa1169900-mRNA-1:exon:20122;Parent=Msa1169900-mRNA-1 |
| chr7_4 | CDS | 63013449 | 63013620 | 63013449 | ID=Msa1169900-mRNA-1:cds;Parent=Msa1169900-mRNA-1 |
| chr7_4 | CDS | 63013194 | 63013415 | 63013194 | ID=Msa1169900-mRNA-1:cds;Parent=Msa1169900-mRNA-1 |
| chr7_4 | CDS | 63012934 | 63013178 | 63012934 | ID=Msa1169900-mRNA-1:cds;Parent=Msa1169900-mRNA-1 |
| chr7_4 | CDS | 63012807 | 63012918 | 63012807 | ID=Msa1169900-mRNA-1:cds;Parent=Msa1169900-mRNA-1 |
| chr7_4 | CDS | 63012613 | 63012779 | 63012613 | ID=Msa1169900-mRNA-1:cds;Parent=Msa1169900-mRNA-1 |
| chr7_4 | CDS | 63011658 | 63011843 | 63011658 | ID=Msa1169900-mRNA-1:cds;Parent=Msa1169900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
