AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1171560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1171560 MtrunA17_Chr3g0114161 94.547 1247 45 1 21 1267 25 1248 0.0 2409
Msa1171560 MtrunA17_Chr7g0224051 79.532 855 155 7 413 1266 281 1116 0.0 1366
Msa1171560 MtrunA17_Chr7g0224051 72.569 288 72 2 47 333 1 282 2.23e-128 424
Msa1171560 MtrunA17_Chr5g0437621 55.340 1339 482 27 5 1266 4 1303 0.0 1342
Msa1171560 MtrunA17_Chr1g0191141 72.077 881 216 11 388 1266 250 1102 0.0 1248
Msa1171560 MtrunA17_Chr1g0191141 66.667 231 73 2 21 251 8 234 1.14e-86 306
Msa1171560 MtrunA17_Chr7g0233031 33.984 768 431 19 512 1253 515 1232 2.33e-113 384
Msa1171560 MtrunA17_Chr7g0233021 35.359 724 395 18 550 1247 537 1213 1.40e-111 379
Msa1171560 MtrunA17_Chr7g0225791 33.743 732 435 17 529 1247 574 1268 1.66e-108 372
Msa1171560 MtrunA17_Chr4g0047081 33.379 725 418 17 550 1255 548 1226 2.55e-104 359
Msa1171560 MtrunA17_Chr7g0232971 32.859 773 430 20 529 1267 581 1298 9.98e-104 358
Msa1171560 MtrunA17_Chr7g0224031 73.059 219 58 1 828 1046 25 242 1.35e-100 320
Msa1171560 MtrunA17_Chr7g0232991 32.344 640 373 15 647 1255 38 648 2.29e-89 304
Msa1171560 MtrunA17_Chr2g0296421 31.087 727 399 21 508 1222 365 1001 5.03e-88 309
Msa1171560 MtrunA17_Chr8g0352361 30.929 721 408 22 508 1222 216 852 9.64e-85 296
Msa1171560 MtrunA17_Chr7g0233001 33.210 539 323 11 730 1257 1 513 3.47e-76 262
Msa1171560 MtrunA17_Chr7g0224021 73.451 113 28 1 651 763 1 111 2.12e-52 179
Msa1171560 MtrunA17_Chr2g0320781 34.156 243 152 5 975 1215 4 240 6.56e-37 139
Msa1171560 MtrunA17_Chr8g0384531 24.615 585 334 22 665 1214 368 880 1.71e-30 130
Msa1171560 MtrunA17_Chr5g0403921 25.503 596 335 22 672 1250 174 677 6.64e-26 115
Msa1171560 MtrunA17_Chr1g0190391 29.461 241 139 8 675 911 576 789 4.59e-23 106
Msa1171560 MtrunA17_Chr4g0052341 23.956 551 310 20 716 1241 767 1233 2.14e-22 105
Msa1171560 MtrunA17_Chr3g0137091 24.296 568 326 19 715 1256 310 799 4.92e-21 100
Msa1171560 MtrunA17_Chr1g0190381 35.583 163 93 4 1074 1227 196 355 1.35e-18 91.3
Msa1171560 MtrunA17_Chr1g0205891 23.218 547 328 16 710 1248 392 854 7.65e-17 86.7
Msa1171560 MtrunA17_Chr5g0393461 32.192 146 95 2 1117 1260 583 726 1.33e-15 82.4
Msa1171560 MtrunA17_Chr4g0040301 32.335 167 100 4 1077 1236 389 549 4.34e-15 80.5
Msa1171560 MtrunA17_Chr3g0114111 88.889 36 4 0 1220 1255 1 36 1.04e-13 67.4
Msa1171560 MtrunA17_Chr1g0183681 31.429 140 90 3 1083 1222 750 883 5.20e-13 73.9
Msa1171560 MtrunA17_Chr5g0394201 30.108 186 117 4 1065 1249 668 841 1.03e-12 73.2
Msa1171560 MtrunA17_Chr7g0232121 23.022 556 310 21 715 1232 60 535 2.98e-12 71.6
Msa1171560 MtrunA17_Chr7g0257101 29.545 176 116 5 1049 1223 1173 1341 1.72e-11 69.3
Msa1171560 MtrunA17_Chr7g0255821 38.298 94 57 1 1113 1205 690 783 4.91e-11 67.4
Msa1171560 MtrunA17_Chr3g0095091 31.746 126 81 2 1086 1211 905 1025 5.61e-11 67.8
Msa1171560 MtrunA17_Chr2g0320751 41.379 87 50 1 1119 1205 896 981 9.83e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1171560 AT5G20420.1 61.490 792 275 13 488 1266 486 1260 0.0 950
Msa1171560 AT5G20420.1 39.820 334 156 12 5 321 3 308 3.87e-56 214
Msa1171560 AT3G42670.2 58.323 847 304 14 443 1266 434 1254 0.0 950
Msa1171560 AT3G42670.3 58.323 847 304 14 443 1266 434 1254 0.0 950
Msa1171560 AT3G42670.1 58.323 847 304 14 443 1266 434 1254 0.0 950
Msa1171560 AT3G42670.4 58.225 845 310 13 443 1266 434 1256 0.0 949
Msa1171560 AT3G24340.1 32.326 761 424 18 510 1255 430 1114 3.42e-105 360
Msa1171560 AT1G05490.1 32.466 730 429 18 548 1251 693 1384 1.25e-100 351
Msa1171560 AT2G21450.3 30.898 657 370 19 584 1222 92 682 1.61e-79 278
Msa1171560 AT2G16390.2 30.174 749 413 21 493 1222 193 850 1.65e-79 281
Msa1171560 AT2G16390.1 30.174 749 413 21 493 1222 190 847 2.60e-79 281
Msa1171560 AT2G21450.2 30.898 657 370 19 584 1222 190 780 3.23e-79 279
Msa1171560 AT2G21450.1 30.898 657 370 19 584 1222 183 773 4.10e-79 279
Msa1171560 AT5G63950.1 25.174 576 329 22 671 1214 367 872 8.21e-29 125
Msa1171560 AT3G19210.2 23.217 603 348 23 681 1246 180 704 1.41e-28 124
Msa1171560 AT5G63950.2 25.654 573 313 23 671 1214 367 855 1.51e-28 125
Msa1171560 AT1G08600.4 26.901 342 187 14 680 1011 718 1006 4.98e-24 110
Msa1171560 AT1G08600.4 34.969 163 94 4 1074 1227 1123 1282 1.08e-17 90.1
Msa1171560 AT1G08600.3 26.901 342 187 14 680 1011 718 1006 4.98e-24 110
Msa1171560 AT1G08600.3 34.969 163 94 4 1074 1227 1123 1282 1.08e-17 90.1
Msa1171560 AT1G08600.2 26.901 342 187 14 680 1011 718 1006 4.98e-24 110
Msa1171560 AT1G08600.2 34.969 163 94 4 1074 1227 1123 1282 1.08e-17 90.1
Msa1171560 AT4G31900.3 23.573 543 307 18 671 1205 214 656 3.29e-19 94.7
Msa1171560 AT4G31900.2 23.218 547 304 17 671 1205 173 615 3.68e-19 94.7
Msa1171560 AT4G31900.1 23.573 543 307 18 671 1205 214 656 4.18e-19 94.4
Msa1171560 AT3G06010.1 23.913 552 320 17 710 1249 419 882 6.09e-18 90.5
Msa1171560 AT1G08600.1 34.969 163 94 4 1074 1227 1102 1261 1.16e-17 89.7
Msa1171560 AT2G44980.1 25.636 511 289 22 722 1218 80 513 9.31e-17 86.7
Msa1171560 AT5G44800.1 24.319 551 312 22 716 1249 711 1173 3.16e-16 85.5
Msa1171560 AT1G03750.1 30.939 181 111 5 1064 1236 523 697 6.08e-16 84.0
Msa1171560 AT3G19210.1 34.351 131 84 1 1116 1246 578 706 6.36e-16 84.0
Msa1171560 AT3G19210.3 35.156 128 81 1 1119 1246 581 706 9.34e-16 83.2
Msa1171560 AT5G66750.1 34.091 176 109 4 1084 1258 540 709 1.08e-15 82.8
Msa1171560 AT2G44980.3 24.310 580 332 24 672 1218 26 531 1.78e-14 79.3
Msa1171560 AT2G44980.2 24.809 524 296 22 722 1218 80 532 3.67e-14 78.2
Msa1171560 AT2G28290.3 39.623 106 63 1 1100 1205 1101 1205 3.08e-12 72.4
Msa1171560 AT2G28290.4 39.623 106 63 1 1100 1205 1101 1205 3.08e-12 72.4
Msa1171560 AT2G28290.6 39.623 106 63 1 1100 1205 1102 1206 3.08e-12 72.4
Msa1171560 AT2G28290.1 39.623 106 63 1 1100 1205 1101 1205 3.09e-12 72.4
Msa1171560 AT2G28290.5 39.623 106 63 1 1100 1205 1102 1206 3.09e-12 72.4
Msa1171560 AT3G57300.1 32.414 145 92 3 1084 1228 1222 1360 3.11e-12 72.0
Msa1171560 AT3G57300.4 32.414 145 92 3 1084 1228 1222 1360 3.11e-12 72.0
Msa1171560 AT2G28290.2 39.623 106 63 1 1100 1205 1101 1205 3.24e-12 72.4
Msa1171560 AT3G57300.2 32.414 145 92 3 1084 1228 1255 1393 3.71e-12 72.0
Msa1171560 AT2G18760.3 30.714 140 91 3 1083 1222 801 934 5.48e-12 71.2
Msa1171560 AT2G18760.4 30.714 140 91 3 1083 1222 742 875 5.63e-12 71.2
Msa1171560 AT2G18760.1 30.714 140 91 3 1083 1222 742 875 5.63e-12 71.2
Msa1171560 AT2G18760.2 30.714 140 91 3 1083 1222 742 875 5.63e-12 71.2
Msa1171560 AT2G18760.7 30.714 140 91 3 1083 1222 742 875 5.63e-12 71.2
Msa1171560 AT2G18760.5 30.714 140 91 3 1083 1222 742 875 5.63e-12 71.2
Msa1171560 AT2G18760.6 30.714 140 91 3 1083 1222 742 875 5.63e-12 71.2
Msa1171560 AT5G19310.2 29.319 191 122 4 1065 1254 427 605 8.01e-12 70.5
Msa1171560 AT5G19310.1 29.319 191 122 4 1065 1254 691 869 9.71e-12 70.5
Msa1171560 AT2G13370.1 33.846 130 79 2 1086 1214 957 1080 1.38e-11 70.1
Msa1171560 AT2G13370.2 33.846 130 79 2 1086 1214 957 1080 1.38e-11 70.1
Msa1171560 AT2G13370.3 33.846 130 79 2 1086 1214 957 1080 1.38e-11 70.1
Msa1171560 AT2G25170.1 34.127 126 72 3 1083 1205 610 727 1.40e-11 70.1
Msa1171560 AT2G25170.4 34.127 126 72 3 1083 1205 610 727 1.40e-11 70.1
Msa1171560 AT2G25170.2 34.127 126 72 3 1083 1205 627 744 1.41e-11 70.1
Msa1171560 AT2G25170.3 34.127 126 72 3 1083 1205 636 753 1.65e-11 69.7
Msa1171560 AT5G05130.1 34.959 123 74 3 1084 1205 725 842 3.20e-11 68.6

Find 186 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCATTAACCTCTTTATTA+AGG 0.150785 8_1:+1252371 None:intergenic
CCAGGAAGAATCATTGATTT+TGG 0.165047 8_1:+1249823 None:intergenic
TTCTCCTCTTTGTACCTCTT+TGG 0.168701 8_1:+1250321 None:intergenic
ATTAGTCAAATAATGATATT+TGG 0.190711 8_1:+1251655 None:intergenic
TGATGGTGATGGCAAGTTTA+AGG 0.208095 8_1:-1251702 Msa1171560:CDS
TTTAGATTGGATGAAGAAAT+TGG 0.208762 8_1:-1250742 Msa1171560:CDS
CCTCTGAAATTAAGCCTTAT+AGG 0.223041 8_1:-1252273 Msa1171560:CDS
AACAAGACTGTTGGAGAAAA+AGG 0.259687 8_1:-1251231 Msa1171560:CDS
TCATCACTTGATATTGTTGT+AGG 0.263435 8_1:+1251572 None:intergenic
AACCTTGATTTAGTGCTTCT+AGG 0.271299 8_1:+1249589 None:intergenic
ACTATCCCTGGATTCTTTCT+TGG 0.272245 8_1:+1250777 None:intergenic
CATATAAGTTGTTCTCTTGT+AGG 0.274870 8_1:+1251841 None:intergenic
TTATAATCTTCATCAACTTT+TGG 0.276698 8_1:+1250261 None:intergenic
TAGTGATGTCAAACATGTTT+TGG 0.279882 8_1:-1249785 Msa1171560:CDS
GCATAACATTGCTGGCTCTA+TGG 0.281856 8_1:-1250103 Msa1171560:CDS
TCTCCTCTTTGTACCTCTTT+GGG 0.286021 8_1:+1250322 None:intergenic
ACTATCTATTATTTCCTTGC+AGG 0.289125 8_1:+1251319 None:intergenic
TGGTGTTGATGTATTGAATT+TGG 0.296843 8_1:-1251609 Msa1171560:CDS
ACATCAAGTTATCTTCTTGA+TGG 0.297384 8_1:-1251122 Msa1171560:CDS
AGAACTTCATGAACAAATTT+CGG 0.305114 8_1:+1249460 None:intergenic
CTTACTGGAATAGACGTAAA+TGG 0.306756 8_1:+1252843 None:intergenic
ATTCAATGGCGCCCATAAAA+AGG 0.307589 8_1:-1253986 None:intergenic
CAAGATTGTGTATCAAGTTA+TGG 0.313307 8_1:-1252116 Msa1171560:CDS
TCGACCGGGCCAGCAGAAAA+TGG 0.318508 8_1:-1248630 Msa1171560:CDS
CTAATGATATCGACAATGTT+TGG 0.321273 8_1:-1250191 Msa1171560:CDS
TTCTCTGCTTGCCATTTAGA+AGG 0.325243 8_1:+1248494 None:intergenic
CCAAAATCAATGATTCTTCC+TGG 0.329198 8_1:-1249823 Msa1171560:CDS
TGCATTAACCTCTTTATTAA+GGG 0.331125 8_1:+1252372 None:intergenic
ATTGATATATCTATGCTATT+AGG 0.336391 8_1:-1252891 Msa1171560:CDS
ACTTCATGTTGTGGATGATA+TGG 0.339055 8_1:-1251480 Msa1171560:CDS
ACATTGTTTCAGAACAATTT+CGG 0.344101 8_1:-1249514 Msa1171560:CDS
TCTGATGAATCCCACCTATA+AGG 0.345661 8_1:+1252259 None:intergenic
CTCAACCTCAAGAGGGTAAC+TGG 0.345817 8_1:+1249126 None:intergenic
AGGGCTTTCTCTCAATGCTT+TGG 0.345836 8_1:+1249642 None:intergenic
GGAAGAATCTCCTGATGATT+TGG 0.346967 8_1:-1251177 Msa1171560:CDS
AATTCTTCTGAGACTCTTCC+TGG 0.348075 8_1:-1249235 Msa1171560:CDS
AGCAAATTTGATTTGAGAAA+AGG 0.352698 8_1:-1249001 Msa1171560:CDS
GCACTTTGTCATCAGATATT+CGG 0.354010 8_1:-1252968 Msa1171560:CDS
TCAACTTCATGTGATGGCTT+TGG 0.355507 8_1:+1251959 None:intergenic
AAGTATTATGTTGAAGCCTT+TGG 0.358364 8_1:+1252323 None:intergenic
TTGTGGAAGATCCTTCTAAA+TGG 0.362063 8_1:-1248505 Msa1171560:CDS
GAGTGATCAAAAGGTTAATA+AGG 0.362826 8_1:-1251771 Msa1171560:CDS
TGATGATTTGGATGCCTTGT+GGG 0.366459 8_1:-1251165 Msa1171560:CDS
TTTCTTTGGCATAACATTGC+TGG 0.370580 8_1:-1250111 Msa1171560:CDS
GAAATGTATCCCTTCCCATT+TGG 0.379249 8_1:+1251448 None:intergenic
ACAGTGCAGTGAAGAAAATA+AGG 0.381838 8_1:-1250298 Msa1171560:CDS
AAGATTGTGTATCAAGTTAT+GGG 0.386679 8_1:-1252115 Msa1171560:CDS
TCATCAAGTATCAAGATTCC+AGG 0.400291 8_1:+1249622 None:intergenic
GCTCAAAACAAATCTTACTT+TGG 0.400942 8_1:+1248976 None:intergenic
ACAGAAACTACAGAGGAAAA+TGG 0.408346 8_1:-1249158 Msa1171560:CDS
AGTTACTTGAAGTTATTTCC+AGG 0.421538 8_1:-1249979 Msa1171560:CDS
TAATGATATCGACAATGTTT+GGG 0.425400 8_1:-1250190 Msa1171560:CDS
CACAATCTAGATTACTCGTT+GGG 0.425426 8_1:-1252219 Msa1171560:CDS
CACTTGGATCAATACATTCA+TGG 0.425964 8_1:-1249093 Msa1171560:CDS
AGTAATATTCTCAATTCTGT+TGG 0.426455 8_1:+1249544 None:intergenic
AGCATAGATATATCAATTCC+AGG 0.429264 8_1:+1252897 None:intergenic
TCATTAGTCAATGGTTCATC+AGG 0.430750 8_1:+1250207 None:intergenic
GCATTTGAAGCAGTATTGAA+TGG 0.430979 8_1:-1253071 Msa1171560:CDS
AAACTGACATTATTAGTCCT+TGG 0.435671 8_1:-1252087 Msa1171560:CDS
ATATAAGTTGTTCTCTTGTA+GGG 0.439124 8_1:+1251842 None:intergenic
ATTTCTTGTGCAAAGAAGAA+TGG 0.444673 8_1:-1251629 Msa1171560:CDS
TCAAGTGATGAAGAAGTTGA+TGG 0.452513 8_1:-1251560 Msa1171560:CDS
GTCGTACACATCAATAAAAC+CGG 0.453824 8_1:+1249264 None:intergenic
AAGAAAAGAAATGATGAGAA+AGG 0.454786 8_1:+1250005 None:intergenic
TTGACATCACTAGAAGGTCT+TGG 0.457036 8_1:+1249796 None:intergenic
GGTGTCGTCGAACTTGAACC+TGG 0.461275 8_1:+1249844 None:intergenic
CACAAGGCATCCAAATCATC+AGG 0.463541 8_1:+1251167 None:intergenic
TAGCCCATGACAAGAATACT+AGG 0.465520 8_1:+1249727 None:intergenic
CATGATTATGAAGAATGAAA+AGG 0.465758 8_1:-1248414 Msa1171560:CDS
CATGGCCGTCGAACCTCTCC+AGG 0.467950 8_1:-1249862 Msa1171560:CDS
ATCAAAAGCTCAACCTCAAG+AGG 0.468504 8_1:+1249118 None:intergenic
CATGAAGAACAAGATCATAA+AGG 0.469713 8_1:-1251365 Msa1171560:CDS
ACATCAAATTGAGAAACAAT+AGG 0.472158 8_1:+1252019 None:intergenic
ATATCACATGCTCCTGGAGC+AGG 0.473334 8_1:-1250033 Msa1171560:CDS
TCTTTAAAGAGAAGATAAAG+AGG 0.473356 8_1:-1251508 Msa1171560:CDS
GATTGAAGATGATATACTTA+GGG 0.473462 8_1:-1248471 Msa1171560:CDS
AGATTGAAGATGATATACTT+AGG 0.475140 8_1:-1248472 Msa1171560:CDS
ACACAACCTACGTAACGTTC+AGG 0.477670 8_1:+1251902 None:intergenic
CTAGAAGGTCTTGGAAATCC+AGG 0.479150 8_1:+1249805 None:intergenic
AAAGAGATTATGTTACTAAC+GGG 0.481972 8_1:-1248842 Msa1171560:CDS
AGTATCGAAAAGCAATGATC+AGG 0.485382 8_1:-1251198 Msa1171560:CDS
AGGACTAGAGGTCGTTTCCC+TGG 0.486339 8_1:+1249961 None:intergenic
TTCCTTGCAGGCATCAGCGT+TGG 0.488224 8_1:+1251331 None:intergenic
AACACAGCCACCATTTGAGT+TGG 0.488664 8_1:+1250056 None:intergenic
CTGGAGAGGTTCGACGGCCA+TGG 0.491604 8_1:+1249863 None:intergenic
GTGCCGGTTTATCTTATCCA+TGG 0.492001 8_1:-1249880 Msa1171560:CDS
TTACGATAATTAGCATCAAA+TGG 0.492300 8_1:+1253942 None:intergenic
ACAGTAGGCTCTTCTTCAGT+TGG 0.493427 8_1:+1251272 None:intergenic
GAGCTAGACTTGTTTGAAAG+AGG 0.495712 8_1:-1248818 Msa1171560:CDS
TATTATGTTGAAGCCTTTGG+AGG 0.500254 8_1:+1252326 None:intergenic
TTGTCGATATCATTAGTCAA+TGG 0.500652 8_1:+1250198 None:intergenic
TGGTGGTAAGAGTGATCAAA+AGG 0.501525 8_1:-1251780 Msa1171560:CDS
CTGATGATTTGGATGCCTTG+TGG 0.502166 8_1:-1251166 Msa1171560:CDS
GTAAACTTATATGATGATCA+AGG 0.502369 8_1:-1252418 Msa1171560:CDS
ATCATGTTCACAACTATCCC+TGG 0.505981 8_1:+1250765 None:intergenic
AAGCAGTATTGAATGGATCA+TGG 0.507736 8_1:-1253064 Msa1171560:CDS
AAAATGGAAGATTCCTGTGC+CGG 0.511195 8_1:-1249896 Msa1171560:CDS
TATTGATGAGGAGAAGATGC+AGG 0.512826 8_1:-1249314 Msa1171560:CDS
AAGCCATCACATGAAGTTGA+AGG 0.513509 8_1:-1251956 Msa1171560:CDS
CAGATATTCGGATAAGATCA+AGG 0.513601 8_1:-1252956 Msa1171560:CDS
TTCAGTATCAATGAAACGTA+AGG 0.514290 8_1:+1253001 None:intergenic
ACTTCATGTGATGGCTTTGG+TGG 0.514522 8_1:+1251962 None:intergenic
CTTCAACATAATACTTGTGA+AGG 0.515406 8_1:-1252316 Msa1171560:CDS
TCAATCAATGCTTGTGCTGA+AGG 0.515842 8_1:-1248740 Msa1171560:CDS
GAAGAACTACTTGGAAAGAG+TGG 0.517977 8_1:-1248556 Msa1171560:CDS
AGGTTGTGTTGTTGAGAAGT+TGG 0.518892 8_1:-1251888 Msa1171560:CDS
CGGCCATGGATAAGATAAAC+CGG 0.521874 8_1:+1249877 None:intergenic
TTCACAACATTTATAAGCCA+AGG 0.522728 8_1:+1252070 None:intergenic
AACTCTATTAAGAATCTCAC+AGG 0.523720 8_1:+1248896 None:intergenic
GTTACTGACGACCGGGTCGA+TGG 0.527013 8_1:-1248594 Msa1171560:CDS
CTGATACCAAGAAAGAATCC+AGG 0.527093 8_1:-1250783 Msa1171560:CDS
GTGTATCAGTTACTGACGAC+CGG 0.528339 8_1:-1248602 Msa1171560:CDS
GTTACTTGAAGTTATTTCCA+GGG 0.528637 8_1:-1249978 Msa1171560:CDS
ACATGTTTGACATCACTAGA+AGG 0.528845 8_1:+1249790 None:intergenic
AAGCCTTCAACTTCATGTGA+TGG 0.530172 8_1:+1251953 None:intergenic
TACAATCTCATGCTGTTCAT+CGG 0.532890 8_1:+1249180 None:intergenic
CTCAGAAATGTCTCGTATTG+CGG 0.533698 8_1:+1250687 None:intergenic
ACACCCTAGTATTCTTGTCA+TGG 0.534308 8_1:-1249731 Msa1171560:CDS
AGATGATATACTTAGGGAGA+TGG 0.537029 8_1:-1248465 Msa1171560:CDS
GTTGTTGAGAAGTTGGAAGT+TGG 0.537957 8_1:-1251881 Msa1171560:CDS
CTCTTCTTCAGATTCAGAAG+AGG 0.540428 8_1:-1251804 Msa1171560:CDS
ATCCTAGAAGCACTAAATCA+AGG 0.543534 8_1:-1249591 Msa1171560:CDS
AGCTAGACTTGTTTGAAAGA+GGG 0.545005 8_1:-1248817 Msa1171560:CDS
TGTGTTATATCACATGCTCC+TGG 0.545385 8_1:-1250039 Msa1171560:CDS
GGAATCTTGATACTTGATGA+AGG 0.550715 8_1:-1249619 Msa1171560:CDS
CTCTATGGAACCATCACTCA+TGG 0.552151 8_1:-1250088 Msa1171560:CDS
ATCCAACGCTGATGCCTGCA+AGG 0.554717 8_1:-1251333 Msa1171560:CDS
TTCCGCTTCTCATTTACAGT+AGG 0.555775 8_1:+1251257 None:intergenic
TCTTCAGATTCAGAAGAGGA+TGG 0.556076 8_1:-1251800 Msa1171560:CDS
TGGATAAGATAAACCGGCAC+AGG 0.556571 8_1:+1249883 None:intergenic
ATAAGTATAGAAGAACTACT+TGG 0.563508 8_1:-1248565 Msa1171560:CDS
GATGTATTGAATTTGGAGTA+CGG 0.563713 8_1:-1251602 Msa1171560:CDS
AAGAACTACTTGGAAAGAGT+GGG 0.567137 8_1:-1248555 Msa1171560:CDS
GCGGAAGGAAACAAGACTGT+TGG 0.570396 8_1:-1251240 Msa1171560:CDS
TATGATGATCAAGGTTCACT+TGG 0.572239 8_1:-1252409 Msa1171560:CDS
TGAAATTAAGCCTTATAGGT+GGG 0.572501 8_1:-1252269 Msa1171560:CDS
CCTATAAGGCTTAATTTCAG+AGG 0.573942 8_1:+1252273 None:intergenic
GATTCTAAATACCGAAGGAA+AGG 0.574058 8_1:-1249427 Msa1171560:CDS
TTTATTGATGTGTACGACAG+TGG 0.574824 8_1:-1249259 Msa1171560:CDS
CATCAAGTATCAAGATTCCA+GGG 0.577717 8_1:+1249623 None:intergenic
CACCCTAGTATTCTTGTCAT+GGG 0.578011 8_1:-1249730 Msa1171560:CDS
GAGTACCAGTTACCCTCTTG+AGG 0.579454 8_1:-1249131 Msa1171560:CDS
TCACAATCTAGATTACTCGT+TGG 0.580048 8_1:-1252220 Msa1171560:CDS
TAAAGAGATTATGTTACTAA+CGG 0.582570 8_1:-1248843 Msa1171560:CDS
ACTTAGGGAGATGGTTGAAG+AGG 0.582988 8_1:-1248456 Msa1171560:CDS
GCTTGCGACGTTCGAAACGT+AGG 0.587148 8_1:-1251934 Msa1171560:CDS
GAAGCACTAAATCAAGGTTG+AGG 0.587727 8_1:-1249585 Msa1171560:CDS
ATTGTTCTGAAACAATGTGC+CGG 0.589502 8_1:+1249519 None:intergenic
TGATACCAAGAAAGAATCCA+GGG 0.590473 8_1:-1250782 Msa1171560:CDS
TTGAACCTGGAGAGGTTCGA+CGG 0.591619 8_1:+1249857 None:intergenic
AGCCTACTGTAAATGAGAAG+CGG 0.593553 8_1:-1251259 Msa1171560:CDS
CTGAAATTAAGCCTTATAGG+TGG 0.602209 8_1:-1252270 Msa1171560:CDS
CTTATCTTCTTCCATCGACC+CGG 0.602308 8_1:+1248583 None:intergenic
GAAAGAACGTCATTTGCTTG+AGG 0.606173 8_1:-1249389 Msa1171560:CDS
TCTAAATACCGAAGGAAAGG+CGG 0.606320 8_1:-1249424 Msa1171560:CDS
AAAGCATTGAGAGAAAGCCC+TGG 0.610887 8_1:-1249640 Msa1171560:CDS
ATTCGCACACAGAAAATACA+TGG 0.611483 8_1:-1249665 Msa1171560:CDS
AATGTATAGATTTGTAAACC+AGG 0.619375 8_1:+1249217 None:intergenic
TTAAGAATCTCACAGGTGCA+AGG 0.619647 8_1:+1248903 None:intergenic
TGTATTCATTTCTTCCCACA+AGG 0.620617 8_1:+1251151 None:intergenic
CGTCGAACTTGAACCTGGAG+AGG 0.620998 8_1:+1249849 None:intergenic
GAATTGAGAATATTACTCTC+CGG 0.621894 8_1:-1249538 Msa1171560:CDS
GAGGAAGAGACTTCATGTTG+TGG 0.623646 8_1:-1251489 Msa1171560:CDS
TACTGTAAATGAGAAGCGGA+AGG 0.625752 8_1:-1251255 Msa1171560:CDS
GGAATCTACTGCCTTCGATG+TGG 0.627188 8_1:-1250721 Msa1171560:CDS
TTTGAGCCTAATCTCACGAG+TGG 0.632989 8_1:-1248960 Msa1171560:CDS
TCAAGGTTCACTTGGTACAG+AGG 0.634309 8_1:-1252401 Msa1171560:CDS
AGTTAGATTCTAAATACCGA+AGG 0.636709 8_1:-1249432 Msa1171560:CDS
AAGCTATTAATGTGAGCACA+AGG 0.641563 8_1:-1251736 Msa1171560:CDS
GTCTTCGCAAGATACAGAAG+TGG 0.643128 8_1:-1249759 Msa1171560:CDS
ATAGCAGGGTTCAACTGCTG+AGG 0.645924 8_1:-1250812 Msa1171560:intron
AATTAACTCAGATATTGATG+AGG 0.647649 8_1:-1249326 Msa1171560:CDS
AAATTTGAAGATCAAAGCAG+CGG 0.654526 8_1:-1248782 Msa1171560:CDS
ATTGATGAGGAGAAGATGCA+GGG 0.655538 8_1:-1249313 Msa1171560:CDS
AGCCCATGACAAGAATACTA+GGG 0.657575 8_1:+1249728 None:intergenic
TGTATCAGTTACTGACGACC+GGG 0.657785 8_1:-1248601 Msa1171560:CDS
GAATGGATCATGGCAACCTG+TGG 0.660516 8_1:-1253054 Msa1171560:CDS
TCAAAAGCTCAACCTCAAGA+GGG 0.663408 8_1:+1249119 None:intergenic
TCAGATTCAGAAGAGGATGG+TGG 0.664458 8_1:-1251797 Msa1171560:CDS
GATAGGTGGAATGCCCAAAG+AGG 0.668768 8_1:-1250335 Msa1171560:intron
ATGCCCAAAGAGGTACAAAG+AGG 0.679372 8_1:-1250325 Msa1171560:CDS
GAACATTGATCAGATTTGTG+AGG 0.682243 8_1:+1252454 None:intergenic
TTATCTTCTTGATGGAACCG+CGG 0.688834 8_1:-1251114 Msa1171560:intron
GAAGAACAAGATCATAAAGG+CGG 0.691605 8_1:-1251362 Msa1171560:CDS
GTACAGCCTGAACGTTACGT+AGG 0.720601 8_1:-1251908 Msa1171560:CDS
AGATTGTACAGAAACTACAG+AGG 0.767273 8_1:-1249165 Msa1171560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATATATAGTAATAAAATTA+AGG + chr8_1:1248478-1248497 None:intergenic 10.0%
!!! AATTAATACATTTTAATTAC+AGG - chr8_1:1249146-1249165 Msa1171560:CDS 10.0%
!! TATATATAAATTAAGTTATC+AGG + chr8_1:1252024-1252043 None:intergenic 10.0%
!! CTTAATTTATATATAATGAT+AGG - chr8_1:1252029-1252048 Msa1171560:CDS 10.0%
!! AAAATATGAATAATCATCAA+TGG - chr8_1:1248522-1248541 Msa1171560:CDS 15.0%
!! TATACAATAAATATCAAGAT+TGG + chr8_1:1249038-1249057 None:intergenic 15.0%
!!! AATTACATCTTTTTTAAAGA+AGG - chr8_1:1250214-1250233 Msa1171560:CDS 15.0%
!! ATTAGTCAAATAATGATATT+TGG + chr8_1:1250729-1250748 None:intergenic 15.0%
!! AATTTATATATAATGATAGG+TGG - chr8_1:1252032-1252051 Msa1171560:CDS 15.0%
!! TGATTTAATTCAACATTTGT+TGG - chr8_1:1248863-1248882 Msa1171560:CDS 20.0%
!!! TTGTTATTTTTCATTTGACT+TGG - chr8_1:1248922-1248941 Msa1171560:CDS 20.0%
!!! TGGTTTTTCTAAGAAAAAAT+TGG + chr8_1:1249014-1249033 None:intergenic 20.0%
!!! TGTTTTGAAATAAGAATTAG+GGG + chr8_1:1249290-1249309 None:intergenic 20.0%
!!! CTGTTTTGAAATAAGAATTA+GGG + chr8_1:1249291-1249310 None:intergenic 20.0%
!! ATTGATATATCTATGCTATT+AGG - chr8_1:1249490-1249509 Msa1171560:CDS 20.0%
!! AATAAAAAGTTTGAACTTAC+TGG + chr8_1:1249556-1249575 None:intergenic 20.0%
!!! GATGTATTTTATGATTATGA+TGG - chr8_1:1250380-1250399 Msa1171560:intron 20.0%
!!! TTTTAAACTTTTTACACCAA+CGG + chr8_1:1251352-1251371 None:intergenic 20.0%
!!! TGTAAAAAGTTTAAAACTGT+CGG - chr8_1:1251356-1251375 Msa1171560:CDS 20.0%
!!! TTGTTTTGTCTTCTTTTATA+AGG - chr8_1:1251523-1251542 Msa1171560:CDS 20.0%
!!! TTTTATATTTGACTTACGAA+TGG + chr8_1:1251720-1251739 None:intergenic 20.0%
!! ACAAAATATCTAACCAAATA+AGG + chr8_1:1251975-1251994 None:intergenic 20.0%
!!! TTATAATCTTCATCAACTTT+TGG + chr8_1:1252123-1252142 None:intergenic 20.0%
!!! AAAAAGCTTTTGAATTTCTT+TGG - chr8_1:1252256-1252275 Msa1171560:CDS 20.0%
!!! TATTTGAGAAATATTTTCAG+TGG - chr8_1:1253507-1253526 Msa1171560:intron 20.0%
!! TAAAGAGATTATGTTACTAA+CGG - chr8_1:1253538-1253557 Msa1171560:intron 20.0%
! TTACGATAATTAGCATCAAA+TGG + chr8_1:1248442-1248461 None:intergenic 25.0%
! ATGAATGCAACAAATGATAT+AGG - chr8_1:1248595-1248614 Msa1171560:CDS 25.0%
! TTAATCTAACAATCTATAGC+CGG + chr8_1:1248637-1248656 None:intergenic 25.0%
! CAATAAATATCAAGATTGGA+TGG + chr8_1:1249034-1249053 None:intergenic 25.0%
!! ATAAACCATGATTTTGAATG+TGG - chr8_1:1249086-1249105 Msa1171560:CDS 25.0%
! TGAATGAGAACATGAAATTA+TGG + chr8_1:1249234-1249253 None:intergenic 25.0%
!!! GCTGTTTTGAAATAAGAATT+AGG + chr8_1:1249292-1249311 None:intergenic 25.0%
! AACTTCATTTCTTAGTAAAC+TGG - chr8_1:1249577-1249596 Msa1171560:CDS 25.0%
! GATAATCCAAGTTCAAATTA+TGG + chr8_1:1249746-1249765 None:intergenic 25.0%
! CAAATGTGATTTATTTCAAG+TGG + chr8_1:1249797-1249816 None:intergenic 25.0%
!! CTTTTTGTAAATTGTAGATG+TGG - chr8_1:1249871-1249890 Msa1171560:CDS 25.0%
! GTAAACTTATATGATGATCA+AGG - chr8_1:1249963-1249982 Msa1171560:CDS 25.0%
! TGCATTAACCTCTTTATTAA+GGG + chr8_1:1250012-1250031 None:intergenic 25.0%
! TTGCATTAACCTCTTTATTA+AGG + chr8_1:1250013-1250032 None:intergenic 25.0%
! AAGATTGTGTATCAAGTTAT+GGG - chr8_1:1250266-1250285 Msa1171560:CDS 25.0%
! ACATCAAATTGAGAAACAAT+AGG + chr8_1:1250365-1250384 None:intergenic 25.0%
! ATATAAGTTGTTCTCTTGTA+GGG + chr8_1:1250542-1250561 None:intergenic 25.0%
! ACAAGGAACAAAAATTATGA+TGG - chr8_1:1250662-1250681 Msa1171560:intron 25.0%
!! AACAAAAATTATGATGGTGA+TGG - chr8_1:1250668-1250687 Msa1171560:intron 25.0%
!! TCTTTAAAGAGAAGATAAAG+AGG - chr8_1:1250873-1250892 Msa1171560:intron 25.0%
!! ATATGGATTTTCAAACCAAA+TGG - chr8_1:1250918-1250937 Msa1171560:intron 25.0%
!! TATGGATTTTCAAACCAAAT+GGG - chr8_1:1250919-1250938 Msa1171560:intron 25.0%
!! TTTAAAGTCACACATACAAT+TGG + chr8_1:1251392-1251411 None:intergenic 25.0%
! AATGATGTGACAATTATGAT+TGG - chr8_1:1251441-1251460 Msa1171560:CDS 25.0%
!! TTGTGAACATGATTTTAGAT+TGG - chr8_1:1251626-1251645 Msa1171560:CDS 25.0%
! TTTAGATTGGATGAAGAAAT+TGG - chr8_1:1251639-1251658 Msa1171560:CDS 25.0%
! TTAACTGTATTCTCCTTATT+TGG - chr8_1:1251959-1251978 Msa1171560:CDS 25.0%
! TAATGATATCGACAATGTTT+GGG - chr8_1:1252191-1252210 Msa1171560:CDS 25.0%
!!! GAAATTCAAAAGCTTTTTTC+TGG + chr8_1:1252254-1252273 None:intergenic 25.0%
! AAGAAAAGAAATGATGAGAA+AGG + chr8_1:1252379-1252398 None:intergenic 25.0%
! AGTAATATTCTCAATTCTGT+TGG + chr8_1:1252840-1252859 None:intergenic 25.0%
! ACATTGTTTCAGAACAATTT+CGG - chr8_1:1252867-1252886 Msa1171560:CDS 25.0%
! AGAACTTCATGAACAAATTT+CGG + chr8_1:1252924-1252943 None:intergenic 25.0%
! AATTAACTCAGATATTGATG+AGG - chr8_1:1253055-1253074 Msa1171560:CDS 25.0%
! AATGTATAGATTTGTAAACC+AGG + chr8_1:1253167-1253186 None:intergenic 25.0%
!! AAATATTTTCAGTGGCAAAA+TGG - chr8_1:1253515-1253534 Msa1171560:intron 25.0%
! AAAGAGATTATGTTACTAAC+GGG - chr8_1:1253539-1253558 Msa1171560:intron 25.0%
! ATAAGTATAGAAGAACTACT+TGG - chr8_1:1253816-1253835 Msa1171560:intron 25.0%
! AGATTGAAGATGATATACTT+AGG - chr8_1:1253909-1253928 Msa1171560:intron 25.0%
! GATTGAAGATGATATACTTA+GGG - chr8_1:1253910-1253929 Msa1171560:intron 25.0%
! CATGATTATGAAGAATGAAA+AGG - chr8_1:1253967-1253986 Msa1171560:CDS 25.0%
! TGATGCAAATGCCTTTTTAT+GGG + chr8_1:1248409-1248428 None:intergenic 30.0%
! TTGATGCAAATGCCTTTTTA+TGG + chr8_1:1248410-1248429 None:intergenic 30.0%
!! TAAAAAGGCATTTGCATCAA+TGG - chr8_1:1248410-1248429 Msa1171560:CDS 30.0%
! ATCATTTGTTGCATTCATCA+TGG + chr8_1:1248593-1248612 None:intergenic 30.0%
!!! TCTATTTTTAAGAGTTCCAC+AGG + chr8_1:1249346-1249365 None:intergenic 30.0%
GAACTCTTAAAAATAGAGTC+AGG - chr8_1:1249349-1249368 Msa1171560:CDS 30.0%
TTCAGTATCAATGAAACGTA+AGG + chr8_1:1249383-1249402 None:intergenic 30.0%
AGCATAGATATATCAATTCC+AGG + chr8_1:1249487-1249506 None:intergenic 30.0%
TTCTAGCCATAATTTGAACT+TGG - chr8_1:1249737-1249756 Msa1171560:CDS 30.0%
TCAAGTGGTTAATTCAGTTA+AGG + chr8_1:1249782-1249801 None:intergenic 30.0%
GGTAAAAACCCTTAATAAAG+AGG - chr8_1:1250001-1250020 Msa1171560:CDS 30.0%
! ATCAAATTTTCATCCTCCAA+AGG - chr8_1:1250042-1250061 Msa1171560:CDS 30.0%
AAGTATTATGTTGAAGCCTT+TGG + chr8_1:1250061-1250080 None:intergenic 30.0%
CTTCAACATAATACTTGTGA+AGG - chr8_1:1250065-1250084 Msa1171560:CDS 30.0%
! TGAAATTAAGCCTTATAGGT+GGG - chr8_1:1250112-1250131 Msa1171560:CDS 30.0%
! AATTTTCATCTGATCTTTCG+TGG - chr8_1:1250186-1250205 Msa1171560:CDS 30.0%
! TGTTTTGCACAGATCTTATA+TGG + chr8_1:1250247-1250266 None:intergenic 30.0%
CAAGATTGTGTATCAAGTTA+TGG - chr8_1:1250265-1250284 Msa1171560:CDS 30.0%
AAACTGACATTATTAGTCCT+TGG - chr8_1:1250294-1250313 Msa1171560:CDS 30.0%
TTCACAACATTTATAAGCCA+AGG + chr8_1:1250314-1250333 None:intergenic 30.0%
TGTGAACTTCAGCTTAAAAA+AGG - chr8_1:1250328-1250347 Msa1171560:CDS 30.0%
CATATAAGTTGTTCTCTTGT+AGG + chr8_1:1250543-1250562 None:intergenic 30.0%
GAGTGATCAAAAGGTTAATA+AGG - chr8_1:1250610-1250629 Msa1171560:intron 30.0%
ATTTCTTGTGCAAAGAAGAA+TGG - chr8_1:1250752-1250771 Msa1171560:CDS 30.0%
!! TGGTGTTGATGTATTGAATT+TGG - chr8_1:1250772-1250791 Msa1171560:CDS 30.0%
! GATGTATTGAATTTGGAGTA+CGG - chr8_1:1250779-1250798 Msa1171560:CDS 30.0%
TCATCACTTGATATTGTTGT+AGG + chr8_1:1250812-1250831 None:intergenic 30.0%
! ATTTTCAAACCAAATGGGAA+GGG - chr8_1:1250924-1250943 Msa1171560:intron 30.0%
! CTCGAATGAAAATTTTCTGT+TGG + chr8_1:1250971-1250990 None:intergenic 30.0%
CATGAAGAACAAGATCATAA+AGG - chr8_1:1251016-1251035 Msa1171560:intron 30.0%
ACTATCTATTATTTCCTTGC+AGG + chr8_1:1251065-1251084 None:intergenic 30.0%
ACATCAAGTTATCTTCTTGA+TGG - chr8_1:1251259-1251278 Msa1171560:CDS 30.0%
!!! GTTTATTTTTGTTACACCGT+TGG - chr8_1:1251333-1251352 Msa1171560:CDS 30.0%
TGATTCAGTTCAAATATAGC+AGG - chr8_1:1251554-1251573 Msa1171560:CDS 30.0%
GATTCAGTTCAAATATAGCA+GGG - chr8_1:1251555-1251574 Msa1171560:CDS 30.0%
!! ATTTTAGTCCCTCATTTTGT+TGG - chr8_1:1251762-1251781 Msa1171560:CDS 30.0%
CAACATATCCAACAAAATGA+GGG + chr8_1:1251773-1251792 None:intergenic 30.0%
ACAACATATCCAACAAAATG+AGG + chr8_1:1251774-1251793 None:intergenic 30.0%
AATCGTGAATCACGAAAAAT+AGG + chr8_1:1251918-1251937 None:intergenic 30.0%
TTGTCGATATCATTAGTCAA+TGG + chr8_1:1252186-1252205 None:intergenic 30.0%
CTAATGATATCGACAATGTT+TGG - chr8_1:1252190-1252209 Msa1171560:CDS 30.0%
GAAGAAAAATCCAACTCAAA+TGG - chr8_1:1252315-1252334 Msa1171560:CDS 30.0%
! AGTTACTTGAAGTTATTTCC+AGG - chr8_1:1252402-1252421 Msa1171560:CDS 30.0%
! GTTACTTGAAGTTATTTCCA+GGG - chr8_1:1252403-1252422 Msa1171560:CDS 30.0%
! TAGTGATGTCAAACATGTTT+TGG - chr8_1:1252596-1252615 Msa1171560:intron 30.0%
GAATTGAGAATATTACTCTC+CGG - chr8_1:1252843-1252862 Msa1171560:intron 30.0%
AGTTAGATTCTAAATACCGA+AGG - chr8_1:1252949-1252968 Msa1171560:CDS 30.0%
!!! ATGTGCAACTAAGTTTTTTG+CGG - chr8_1:1253331-1253350 Msa1171560:intron 30.0%
GCTCAAAACAAATCTTACTT+TGG + chr8_1:1253408-1253427 None:intergenic 30.0%
AACTCTATTAAGAATCTCAC+AGG + chr8_1:1253488-1253507 None:intergenic 30.0%
AAATTTGAAGATCAAAGCAG+CGG - chr8_1:1253599-1253618 Msa1171560:intron 30.0%
!!! ATAGCTTGCTTTGTTTTTGA+AGG + chr8_1:1253719-1253738 None:intergenic 30.0%
GCTTATAAAGTTAGCTGCAA+AGG - chr8_1:1248674-1248693 Msa1171560:CDS 35.0%
GACATAAACCAAACCTAGAA+GGG + chr8_1:1248892-1248911 None:intergenic 35.0%
AGACATAAACCAAACCTAGA+AGG + chr8_1:1248893-1248912 None:intergenic 35.0%
! TGCTCTAACTAGTTTCTACA+AGG + chr8_1:1249206-1249225 None:intergenic 35.0%
! GCATTTGAAGCAGTATTGAA+TGG - chr8_1:1249310-1249329 Msa1171560:CDS 35.0%
! AAGCAGTATTGAATGGATCA+TGG - chr8_1:1249317-1249336 Msa1171560:CDS 35.0%
GCACTTTGTCATCAGATATT+CGG - chr8_1:1249413-1249432 Msa1171560:CDS 35.0%
CAGATATTCGGATAAGATCA+AGG - chr8_1:1249425-1249444 Msa1171560:CDS 35.0%
CTTACTGGAATAGACGTAAA+TGG + chr8_1:1249541-1249560 None:intergenic 35.0%
CAGTTAAGGACAAATCATTC+AGG + chr8_1:1249768-1249787 None:intergenic 35.0%
TAAATATCAAGCCAAGTGCT+TGG + chr8_1:1249850-1249869 None:intergenic 35.0%
GAACATTGATCAGATTTGTG+AGG + chr8_1:1249930-1249949 None:intergenic 35.0%
TATGATGATCAAGGTTCACT+TGG - chr8_1:1249972-1249991 Msa1171560:CDS 35.0%
TATTATGTTGAAGCCTTTGG+AGG + chr8_1:1250058-1250077 None:intergenic 35.0%
CCTATAAGGCTTAATTTCAG+AGG + chr8_1:1250111-1250130 None:intergenic 35.0%
!! CCTCTGAAATTAAGCCTTAT+AGG - chr8_1:1250108-1250127 Msa1171560:CDS 35.0%
! CTGAAATTAAGCCTTATAGG+TGG - chr8_1:1250111-1250130 Msa1171560:CDS 35.0%
TCACAATCTAGATTACTCGT+TGG - chr8_1:1250161-1250180 Msa1171560:CDS 35.0%
CACAATCTAGATTACTCGTT+GGG - chr8_1:1250162-1250181 Msa1171560:CDS 35.0%
AAGCTATTAATGTGAGCACA+AGG - chr8_1:1250645-1250664 Msa1171560:intron 35.0%
TCAAGTGATGAAGAAGTTGA+TGG - chr8_1:1250821-1250840 Msa1171560:intron 35.0%
ACTTCATGTTGTGGATGATA+TGG - chr8_1:1250901-1250920 Msa1171560:intron 35.0%
! GATTTTCAAACCAAATGGGA+AGG - chr8_1:1250923-1250942 Msa1171560:intron 35.0%
GAAGAACAAGATCATAAAGG+CGG - chr8_1:1251019-1251038 Msa1171560:intron 35.0%
AACAAGACTGTTGGAGAAAA+AGG - chr8_1:1251150-1251169 Msa1171560:CDS 35.0%
! AGTATCGAAAAGCAATGATC+AGG - chr8_1:1251183-1251202 Msa1171560:CDS 35.0%
TGTATTCATTTCTTCCCACA+AGG + chr8_1:1251233-1251252 None:intergenic 35.0%
TGATACCAAGAAAGAATCCA+GGG - chr8_1:1251599-1251618 Msa1171560:CDS 35.0%
! TTTTCACAAATCCACATCGA+AGG + chr8_1:1251674-1251693 None:intergenic 35.0%
GTTATCAGGTAGATTCATAC+TGG + chr8_1:1252010-1252029 None:intergenic 35.0%
ACAGTGCAGTGAAGAAAATA+AGG - chr8_1:1252083-1252102 Msa1171560:CDS 35.0%
TCATTAGTCAATGGTTCATC+AGG + chr8_1:1252177-1252196 None:intergenic 35.0%
!! TGCATCTTTTCTTCAAGTTC+AGG + chr8_1:1252225-1252244 None:intergenic 35.0%
TTTCTTTGGCATAACATTGC+TGG - chr8_1:1252270-1252289 Msa1171560:CDS 35.0%
! GATTTTTCTTCCATGAGTGA+TGG + chr8_1:1252306-1252325 None:intergenic 35.0%
GAAAAATCCAACTCAAATGG+TGG - chr8_1:1252318-1252337 Msa1171560:CDS 35.0%
GGCGAAAAGAGTTCAAAAAA+TGG - chr8_1:1252469-1252488 Msa1171560:CDS 35.0%
!!! CCAGGAAGAATCATTGATTT+TGG + chr8_1:1252561-1252580 None:intergenic 35.0%
CCAAAATCAATGATTCTTCC+TGG - chr8_1:1252558-1252577 Msa1171560:intron 35.0%
ACATGTTTGACATCACTAGA+AGG + chr8_1:1252594-1252613 None:intergenic 35.0%
ATTCGCACACAGAAAATACA+TGG - chr8_1:1252716-1252735 Msa1171560:intron 35.0%
CATCAAGTATCAAGATTCCA+GGG + chr8_1:1252761-1252780 None:intergenic 35.0%
TCATCAAGTATCAAGATTCC+AGG + chr8_1:1252762-1252781 None:intergenic 35.0%
GGAATCTTGATACTTGATGA+AGG - chr8_1:1252762-1252781 Msa1171560:intron 35.0%
!! ATCCTAGAAGCACTAAATCA+AGG - chr8_1:1252790-1252809 Msa1171560:intron 35.0%
AACCTTGATTTAGTGCTTCT+AGG + chr8_1:1252795-1252814 None:intergenic 35.0%
!! ATTGTTCTGAAACAATGTGC+CGG + chr8_1:1252865-1252884 None:intergenic 35.0%
GATTCTAAATACCGAAGGAA+AGG - chr8_1:1252954-1252973 Msa1171560:CDS 35.0%
GTCGTACACATCAATAAAAC+CGG + chr8_1:1253120-1253139 None:intergenic 35.0%
TTTATTGATGTGTACGACAG+TGG - chr8_1:1253122-1253141 Msa1171560:intron 35.0%
TACAATCTCATGCTGTTCAT+CGG + chr8_1:1253204-1253223 None:intergenic 35.0%
AGATTGTACAGAAACTACAG+AGG - chr8_1:1253216-1253235 Msa1171560:intron 35.0%
ACAGAAACTACAGAGGAAAA+TGG - chr8_1:1253223-1253242 Msa1171560:intron 35.0%
!! GTTGAGCTTTTGATAACACT+TGG - chr8_1:1253272-1253291 Msa1171560:intron 35.0%
CACTTGGATCAATACATTCA+TGG - chr8_1:1253288-1253307 Msa1171560:intron 35.0%
ACGAGTGGTGAAAAATGAAA+AGG - chr8_1:1253436-1253455 Msa1171560:intron 35.0%
! AGCTAGACTTGTTTGAAAGA+GGG - chr8_1:1253564-1253583 Msa1171560:intron 35.0%
!!! AGCTTCTAGAGTGATTTTTC+TGG - chr8_1:1253679-1253698 Msa1171560:intron 35.0%
! ACACATAAACCATTTTCTGC+TGG + chr8_1:1253763-1253782 None:intergenic 35.0%
AAGAACTACTTGGAAAGAGT+GGG - chr8_1:1253826-1253845 Msa1171560:intron 35.0%
! TTCTTGCATGATTTTCAGTG+AGG - chr8_1:1253850-1253869 Msa1171560:intron 35.0%
TTGTGGAAGATCCTTCTAAA+TGG - chr8_1:1253876-1253895 Msa1171560:intron 35.0%
AGATGATATACTTAGGGAGA+TGG - chr8_1:1253916-1253935 Msa1171560:intron 35.0%
!! CATTTGTTGGTTTCCCTTCT+AGG - chr8_1:1248876-1248895 Msa1171560:CDS 40.0%
AATTCCAGGTCGTAAAAAGC+TGG + chr8_1:1249473-1249492 None:intergenic 40.0%
ACTAGACTTAACTTCGCTAC+CGG + chr8_1:1249708-1249727 None:intergenic 40.0%
!! ATGTTGACTTACCAAGCACT+TGG - chr8_1:1249836-1249855 Msa1171560:CDS 40.0%
TCTGATGAATCCCACCTATA+AGG + chr8_1:1250125-1250144 None:intergenic 40.0%
TCAACTTCATGTGATGGCTT+TGG + chr8_1:1250425-1250444 None:intergenic 40.0%
AAGCCATCACATGAAGTTGA+AGG - chr8_1:1250425-1250444 Msa1171560:intron 40.0%
AAGCCTTCAACTTCATGTGA+TGG + chr8_1:1250431-1250450 None:intergenic 40.0%
! AGGTTGTGTTGTTGAGAAGT+TGG - chr8_1:1250493-1250512 Msa1171560:intron 40.0%
GTTGTTGAGAAGTTGGAAGT+TGG - chr8_1:1250500-1250519 Msa1171560:intron 40.0%
CTCTTCTTCAGATTCAGAAG+AGG - chr8_1:1250577-1250596 Msa1171560:intron 40.0%
TCTTCAGATTCAGAAGAGGA+TGG - chr8_1:1250581-1250600 Msa1171560:intron 40.0%
TGGTGGTAAGAGTGATCAAA+AGG - chr8_1:1250601-1250620 Msa1171560:intron 40.0%
!! TGATGGTGATGGCAAGTTTA+AGG - chr8_1:1250679-1250698 Msa1171560:intron 40.0%
GAAATGTATCCCTTCCCATT+TGG + chr8_1:1250936-1250955 None:intergenic 40.0%
AGCCTACTGTAAATGAGAAG+CGG - chr8_1:1251122-1251141 Msa1171560:CDS 40.0%
TTCCGCTTCTCATTTACAGT+AGG + chr8_1:1251127-1251146 None:intergenic 40.0%
TACTGTAAATGAGAAGCGGA+AGG - chr8_1:1251126-1251145 Msa1171560:CDS 40.0%
GGAAGAATCTCCTGATGATT+TGG - chr8_1:1251204-1251223 Msa1171560:CDS 40.0%
! TGATGATTTGGATGCCTTGT+GGG - chr8_1:1251216-1251235 Msa1171560:CDS 40.0%
TTATCTTCTTGATGGAACCG+CGG - chr8_1:1251267-1251286 Msa1171560:CDS 40.0%
AAAAATTGTCACACACACCG+CGG + chr8_1:1251287-1251306 None:intergenic 40.0%
AGTCTACAGAGTCTTTACAC+TGG - chr8_1:1251469-1251488 Msa1171560:CDS 40.0%
CTGATACCAAGAAAGAATCC+AGG - chr8_1:1251598-1251617 Msa1171560:CDS 40.0%
ACTATCCCTGGATTCTTTCT+TGG + chr8_1:1251607-1251626 None:intergenic 40.0%
ATCATGTTCACAACTATCCC+TGG + chr8_1:1251619-1251638 None:intergenic 40.0%
CTCAGAAATGTCTCGTATTG+CGG + chr8_1:1251697-1251716 None:intergenic 40.0%
TCTCCTCTTTGTACCTCTTT+GGG + chr8_1:1252062-1252081 None:intergenic 40.0%
TTCTCCTCTTTGTACCTCTT+TGG + chr8_1:1252063-1252082 None:intergenic 40.0%
TGTGTTATATCACATGCTCC+TGG - chr8_1:1252342-1252361 Msa1171560:CDS 40.0%
AAAATGGAAGATTCCTGTGC+CGG - chr8_1:1252485-1252504 Msa1171560:CDS 40.0%
TTGACATCACTAGAAGGTCT+TGG + chr8_1:1252588-1252607 None:intergenic 40.0%
ACACCCTAGTATTCTTGTCA+TGG - chr8_1:1252650-1252669 Msa1171560:intron 40.0%
CACCCTAGTATTCTTGTCAT+GGG - chr8_1:1252651-1252670 Msa1171560:intron 40.0%
AGCCCATGACAAGAATACTA+GGG + chr8_1:1252656-1252675 None:intergenic 40.0%
TAGCCCATGACAAGAATACT+AGG + chr8_1:1252657-1252676 None:intergenic 40.0%
! GAAGCACTAAATCAAGGTTG+AGG - chr8_1:1252796-1252815 Msa1171560:intron 40.0%
TCTAAATACCGAAGGAAAGG+CGG - chr8_1:1252957-1252976 Msa1171560:CDS 40.0%
! CAATTTTTCCGCCTTTCCTT+CGG + chr8_1:1252968-1252987 None:intergenic 40.0%
GAAAGAACGTCATTTGCTTG+AGG - chr8_1:1252992-1253011 Msa1171560:CDS 40.0%
TATTGATGAGGAGAAGATGC+AGG - chr8_1:1253067-1253086 Msa1171560:CDS 40.0%
ATTGATGAGGAGAAGATGCA+GGG - chr8_1:1253068-1253087 Msa1171560:CDS 40.0%
!! AATTCTTCTGAGACTCTTCC+TGG - chr8_1:1253146-1253165 Msa1171560:intron 40.0%
TCAAAAGCTCAACCTCAAGA+GGG + chr8_1:1253265-1253284 None:intergenic 40.0%
ATCAAAAGCTCAACCTCAAG+AGG + chr8_1:1253266-1253285 None:intergenic 40.0%
!!! TGCAACTAAGTTTTTTGCGG+AGG - chr8_1:1253334-1253353 Msa1171560:intron 40.0%
! TTTTCACCACTCGTGAGATT+AGG + chr8_1:1253430-1253449 None:intergenic 40.0%
TTAAGAATCTCACAGGTGCA+AGG + chr8_1:1253481-1253500 None:intergenic 40.0%
! GAGCTAGACTTGTTTGAAAG+AGG - chr8_1:1253563-1253582 Msa1171560:intron 40.0%
TCAATCAATGCTTGTGCTGA+AGG - chr8_1:1253641-1253660 Msa1171560:intron 40.0%
! TGATTTTTCTGGACTCTGAG+TGG - chr8_1:1253690-1253709 Msa1171560:intron 40.0%
GAAGAACTACTTGGAAAGAG+TGG - chr8_1:1253825-1253844 Msa1171560:intron 40.0%
! GATTTTCAGTGAGGAGTTTG+TGG - chr8_1:1253859-1253878 Msa1171560:intron 40.0%
! TTCTCTGCTTGCCATTTAGA+AGG + chr8_1:1253890-1253909 None:intergenic 40.0%
AGGCTTGAATCCTCTTCAAC+CGG - chr8_1:1248615-1248634 Msa1171560:CDS 45.0%
CAATCTATAGCCGGTTGAAG+AGG + chr8_1:1248628-1248647 None:intergenic 45.0%
! GTTGGTTTCCCTTCTAGGTT+TGG - chr8_1:1248881-1248900 Msa1171560:CDS 45.0%
GCACGCCACATTCAAAATCA+TGG + chr8_1:1249094-1249113 None:intergenic 45.0%
! TCTGAACCCTCCGATTTGTA+AGG - chr8_1:1249655-1249674 Msa1171560:CDS 45.0%
CCAGTTCCTTACAAATCGGA+GGG + chr8_1:1249664-1249683 None:intergenic 45.0%
GTGGCCAGTTCCTTACAAAT+CGG + chr8_1:1249668-1249687 None:intergenic 45.0%
GATTTGTAAGGAACTGGCCA+CGG - chr8_1:1249667-1249686 Msa1171560:CDS 45.0%
CTAGACTTAACTTCGCTACC+GGG + chr8_1:1249707-1249726 None:intergenic 45.0%
TCAAGGTTCACTTGGTACAG+AGG - chr8_1:1249980-1249999 Msa1171560:CDS 45.0%
!! ACTTCATGTGATGGCTTTGG+TGG + chr8_1:1250422-1250441 None:intergenic 45.0%
ACACAACCTACGTAACGTTC+AGG + chr8_1:1250482-1250501 None:intergenic 45.0%
TCAGATTCAGAAGAGGATGG+TGG - chr8_1:1250584-1250603 Msa1171560:intron 45.0%
GAGGAAGAGACTTCATGTTG+TGG - chr8_1:1250892-1250911 Msa1171560:intron 45.0%
ACAGTAGGCTCTTCTTCAGT+TGG + chr8_1:1251112-1251131 None:intergenic 45.0%
! CACAAGGCATCCAAATCATC+AGG + chr8_1:1251217-1251236 None:intergenic 45.0%
! CTGATGATTTGGATGCCTTG+TGG - chr8_1:1251215-1251234 Msa1171560:CDS 45.0%
! ATGCCCAAAGAGGTACAAAG+AGG - chr8_1:1252056-1252075 Msa1171560:CDS 45.0%
!! GCATAACATTGCTGGCTCTA+TGG - chr8_1:1252278-1252297 Msa1171560:CDS 45.0%
CTCTATGGAACCATCACTCA+TGG - chr8_1:1252293-1252312 Msa1171560:CDS 45.0%
AACACAGCCACCATTTGAGT+TGG + chr8_1:1252328-1252347 None:intergenic 45.0%
! AGAAAGGTTTTTCCTGCTCC+AGG + chr8_1:1252363-1252382 None:intergenic 45.0%
!!! GTTTTTGGAGCTAGGACTAG+AGG + chr8_1:1252435-1252454 None:intergenic 45.0%
!!! AGAGTGTGGTTTTTGGAGCT+AGG + chr8_1:1252443-1252462 None:intergenic 45.0%
! CACGTGTAGAGTGTGGTTTT+TGG + chr8_1:1252450-1252469 None:intergenic 45.0%
CAAAAACCACACTCTACACG+TGG - chr8_1:1252448-1252467 Msa1171560:CDS 45.0%
TGGATAAGATAAACCGGCAC+AGG + chr8_1:1252501-1252520 None:intergenic 45.0%
!! GTGCCGGTTTATCTTATCCA+TGG - chr8_1:1252501-1252520 Msa1171560:intron 45.0%
CGGCCATGGATAAGATAAAC+CGG + chr8_1:1252507-1252526 None:intergenic 45.0%
CTAGAAGGTCTTGGAAATCC+AGG + chr8_1:1252579-1252598 None:intergenic 45.0%
GTCTTCGCAAGATACAGAAG+TGG - chr8_1:1252622-1252641 Msa1171560:intron 45.0%
AGGGCTTTCTCTCAATGCTT+TGG + chr8_1:1252742-1252761 None:intergenic 45.0%
!! AAAGCATTGAGAGAAAGCCC+TGG - chr8_1:1252741-1252760 Msa1171560:intron 45.0%
GTGCTGCGAAAAATCACTTC+CGG - chr8_1:1253098-1253117 Msa1171560:intron 45.0%
TTTGAGCCTAATCTCACGAG+TGG - chr8_1:1253421-1253440 Msa1171560:intron 45.0%
! TAAACCATTTTCTGCTGGCC+CGG + chr8_1:1253758-1253777 None:intergenic 45.0%
GTGTATCAGTTACTGACGAC+CGG - chr8_1:1253779-1253798 Msa1171560:intron 45.0%
TGTATCAGTTACTGACGACC+GGG - chr8_1:1253780-1253799 Msa1171560:intron 45.0%
CTTATCTTCTTCCATCGACC+CGG + chr8_1:1253801-1253820 None:intergenic 45.0%
ACTTAGGGAGATGGTTGAAG+AGG - chr8_1:1253925-1253944 Msa1171560:intron 45.0%
GAATGGATCATGGCAACCTG+TGG - chr8_1:1249327-1249346 Msa1171560:CDS 50.0%
! TGCTCCAGCTTTTTACGACC+TGG - chr8_1:1249466-1249485 Msa1171560:CDS 50.0%
! CCCTCCGATTTGTAAGGAAC+TGG - chr8_1:1249661-1249680 Msa1171560:CDS 50.0%
GCCAGTTCCTTACAAATCGG+AGG + chr8_1:1249665-1249684 None:intergenic 50.0%
ACGGTAATCCAGAGTTCACC+CGG - chr8_1:1249686-1249705 Msa1171560:CDS 50.0%
GTACAGCCTGAACGTTACGT+AGG - chr8_1:1250473-1250492 Msa1171560:intron 50.0%
GCGGAAGGAAACAAGACTGT+TGG - chr8_1:1251141-1251160 Msa1171560:CDS 50.0%
ATAGCAGGGTTCAACTGCTG+AGG - chr8_1:1251569-1251588 Msa1171560:CDS 50.0%
GGAATCTACTGCCTTCGATG+TGG - chr8_1:1251660-1251679 Msa1171560:CDS 50.0%
GATAGGTGGAATGCCCAAAG+AGG - chr8_1:1252046-1252065 Msa1171560:CDS 50.0%
ATATCACATGCTCCTGGAGC+AGG - chr8_1:1252348-1252367 Msa1171560:CDS 50.0%
! TTTTCGCCACGTGTAGAGTG+TGG + chr8_1:1252457-1252476 None:intergenic 50.0%
TTGAACCTGGAGAGGTTCGA+CGG + chr8_1:1252527-1252546 None:intergenic 50.0%
GAGTACCAGTTACCCTCTTG+AGG - chr8_1:1253250-1253269 Msa1171560:intron 50.0%
CTCAACCTCAAGAGGGTAAC+TGG + chr8_1:1253258-1253277 None:intergenic 50.0%
! TATTGCACGCGCTTTTCGAC+CGG - chr8_1:1253736-1253755 Msa1171560:intron 50.0%
GGGTGAACTCTGGATTACCG+TGG + chr8_1:1249687-1249706 None:intergenic 55.0%
GCTTGCGACGTTCGAAACGT+AGG - chr8_1:1250447-1250466 Msa1171560:intron 55.0%
ATCCAACGCTGATGCCTGCA+AGG - chr8_1:1251048-1251067 Msa1171560:intron 55.0%
TTCCTTGCAGGCATCAGCGT+TGG + chr8_1:1251053-1251072 None:intergenic 55.0%
AGGACTAGAGGTCGTTTCCC+TGG + chr8_1:1252423-1252442 None:intergenic 55.0%
CGTCGAACTTGAACCTGGAG+AGG + chr8_1:1252535-1252554 None:intergenic 55.0%
! GGTGTCGTCGAACTTGAACC+TGG + chr8_1:1252540-1252559 None:intergenic 55.0%
! ATTGCACGCGCTTTTCGACC+GGG - chr8_1:1253737-1253756 Msa1171560:intron 55.0%
CTTCGCTACCGGGTGAACTC+TGG + chr8_1:1249697-1249716 None:intergenic 60.0%
TCGACCGGGCCAGCAGAAAA+TGG - chr8_1:1253751-1253770 Msa1171560:intron 60.0%
GTTACTGACGACCGGGTCGA+TGG - chr8_1:1253787-1253806 Msa1171560:intron 60.0%
CTGGAGAGGTTCGACGGCCA+TGG + chr8_1:1252521-1252540 None:intergenic 65.0%
CATGGCCGTCGAACCTCTCC+AGG - chr8_1:1252519-1252538 Msa1171560:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 1248400 1254003 1248400 ID=Msa1171560;Name=Msa1171560
chr8_1 mRNA 1248400 1254003 1248400 ID=Msa1171560-mRNA-1;Parent=Msa1171560;Name=Msa1171560-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|0.8|1|1|5|0|1267
chr8_1 exon 1253946 1254003 1253946 ID=Msa1171560-mRNA-1:exon:411;Parent=Msa1171560-mRNA-1
chr8_1 exon 1252848 1253092 1252848 ID=Msa1171560-mRNA-1:exon:410;Parent=Msa1171560-mRNA-1
chr8_1 exon 1251115 1252515 1251115 ID=Msa1171560-mRNA-1:exon:409;Parent=Msa1171560-mRNA-1
chr8_1 exon 1250681 1250827 1250681 ID=Msa1171560-mRNA-1:exon:408;Parent=Msa1171560-mRNA-1
chr8_1 exon 1248400 1250352 1248400 ID=Msa1171560-mRNA-1:exon:407;Parent=Msa1171560-mRNA-1
chr8_1 CDS 1253946 1254003 1253946 ID=Msa1171560-mRNA-1:cds;Parent=Msa1171560-mRNA-1
chr8_1 CDS 1252848 1253092 1252848 ID=Msa1171560-mRNA-1:cds;Parent=Msa1171560-mRNA-1
chr8_1 CDS 1251115 1252515 1251115 ID=Msa1171560-mRNA-1:cds;Parent=Msa1171560-mRNA-1
chr8_1 CDS 1250681 1250827 1250681 ID=Msa1171560-mRNA-1:cds;Parent=Msa1171560-mRNA-1
chr8_1 CDS 1248400 1250352 1248400 ID=Msa1171560-mRNA-1:cds;Parent=Msa1171560-mRNA-1
Gene Sequence

>Msa1171560

ATGGCGCCCATAAAAAGGCATTTGCATCAATGGAAGCATCCATTTGATGCTAATTATCCATTTGAAGCAGTATTGAATGGATCATGGCAACCTGTGGAACTCTTAAAAATAGAGTCAGGAAAAACTACCTTACGTTTCATTGATACTGAACAAATTCAAAGCACTTTGTCATCAGATATTCGGATAAGATCAAGGAAAGCTACTTCATCTGATTGCTCCAGCTTTTTACGACCTGGAATTGATATATCTATGCTATTAGGCTATCGATACAATGATAATTCAGATCCATTTACGTCTATTCCAATGTGGATTGATGCAAGAATAAATTCTATACATAGACAGCCTCACAAATCTGATCAATGTTCATGTCAATTTTATGTAAACTTATATGATGATCAAGGTTCACTTGGTACAGAGGTAAAAACCCTTAATAAAGAGGTTAATGCAATTGAAATAGATCAAATTTTCATCCTCCAAAGGCTTCAACATAATACTTGTGAAGGCTTGTTAAAAGAAAATGATACCTCTGAAATTAAGCCTTATAGGTGGGATTCATCAGAAGATTGCTCTTCATTATCACAATCTAGATTACTCGTTGGGAAATTTTCATCTGATCTTTCGTGGTTTGTAATTACATCTTTTTTAAAGAAGGTTTCATTCCATATAAGATCTGTGCAAAACAAGATTGTGTATCAAGTTATGGGAAATGAAACTGACATTATTAGTCCTTGGCTTATAAATGTTGTGAACTTCAGCTTAAAAAAGGAATCACTAGTACCTATTGTTTCTCAATTTGATGTATTTTATGATTATGATGGAGAAGAAGATGAAGCGCCACCAAAGCCATCACATGAAGTTGAAGGCTTGCGACGTTCGAAACGTAGGAATGTACAGCCTGAACGTTACGTAGGTTGTGTTGTTGAGAAGTTGGAAGTTGGTAATTTTCGAACGTGTCCCTACAAGAGAACAACTTATATGATAGAAGATGAAAACTCTTCTTCAGATTCAGAAGAGGATGGTGGTAAGAGTGATCAAAAGGTTAATAAGGTGAATCATTGCAAAGCTATTAATGTGAGCACAAGGAACAAAAATTATGATGGTGATGGCAAGTTTAAGGTACATAAAACTGATGACATTTCTTCCAAATATCATTATTTGACTAATTATATTTCTTGTGCAAAGAAGAATGGTGTTGATGTATTGAATTTGGAGTACGGCAATGAGCCTACAACAATATCAAGTGATGAAGAAGTTGATGGTAATGTTACTTTGAGAAATTATAATAGTTTCTTTAAAGAGAAGATAAAGAGGAAGAGACTTCATGTTGTGGATGATATGGATTTTCAAACCAAATGGGAAGGGATACATTTCAAAAAAGAAGCTCCAACAGAAAATTTTCATTCGAGTTATTTGTCTAACAGAAGTCATGTTCATGAAGAACAAGATCATAAAGGCGGTAGAACATCCAACGCTGATGCCTGCAAGGAAATAATAGATAGTTACATGAAGAATTTTGATAGTCTACCAACTGAAGAAGAGCCTACTGTAAATGAGAAGCGGAAGGAAACAAGACTGTTGGAGAAAAAGGAAGAAGAAAAAGTATCGAAAAGCAATGATCAGGAAGAATCTCCTGATGATTTGGATGCCTTGTGGGAAGAAATGAATACAGCTTTGACATCAAGTTATCTTCTTGATGGAACCGCGGGTTCAACTGCTGAGGTTGTAGCTGATACCAAGAAAGAATCCAGGGATAGTTGTGAACATGATTTTAGATTGGATGAAGAAATTGGAATCTACTGCCTTCGATGTGGATTTGTGAAAACCGCAATACGAGACATTTCTGAGCCATTCGTGGAATGCCCAAAGAGGTACAAAGAGGAGAAACAGTGCAGTGAAGAAAATAAGGAACATAAATCAGAGCCAAAAGTTGATGAAGATTATAATAATGATATGTTCTCGACTCATGCTACTGATCCTGATGAACCATTGACTAATGATATCGACAATGTTTGGGAATTGATTCCTGAACTTGAAGAAAAGATGCATGAACACCAGAAAAAAGCTTTTGAATTTCTTTGGCATAACATTGCTGGCTCTATGGAACCATCACTCATGGAAGAAAAATCCAACTCAAATGGTGGCTGTGTTATATCACATGCTCCTGGAGCAGGAAAAACCTTTCTCATCATTTCTTTTCTTGTAAGTTACTTGAAGTTATTTCCAGGGAAACGACCTCTAGTCCTAGCTCCAAAAACCACACTCTACACGTGGCGAAAAGAGTTCAAAAAATGGAAGATTCCTGTGCCGGTTTATCTTATCCATGGCCGTCGAACCTCTCCAGGTTCAAGTTCGACGACACCAAAATCAATGATTCTTCCTGGATTTCCAAGACCTTCTAGTGATGTCAAACATGTTTTGGATTGTCTTCGCAAGATACAGAAGTGGCACTCACACCCTAGTATTCTTGTCATGGGCTATACTTCATTTTTACAATTAATGAGATCAAAAGATACAAAATTCGCACACAGAAAATACATGGCCAAAGCATTGAGAGAAAGCCCTGGAATCTTGATACTTGATGAAGGACACAATCCTAGAAGCACTAAATCAAGGTTGAGGAAATGTTTAATGAAACTTCCAACAGAATTGAGAATATTACTCTCCGGCACATTGTTTCAGAACAATTTCGGTGAATATTTCAACACACTTTGTTTAGCTAGACCGAAATTTGTTCATGAAGTTCTACAAGAGTTAGATTCTAAATACCGAAGGAAAGGCGGAAAAATTGCGAAGAAAGAACGTCATTTGCTTGAGGCGCGCGCAAGAAAATTCTTCTTGAACAACATTGAAAAGAAAATTAACTCAGATATTGATGAGGAGAAGATGCAGGGTCTATATGTGCTGCGAAAAATCACTTCCGGTTTTATTGATGTGTACGACAGTGGAAATTCTTCTGAGACTCTTCCTGGTTTACAAATCTATACATTGCTCATGAATACGTCCGATGAACAGCATGAGATTGTACAGAAACTACAGAGGAAAATGGCTGAGAGTACCAGTTACCCTCTTGAGGTTGAGCTTTTGATAACACTTGGATCAATACATTCATGGCTGATCAAAACAGCTGCATCATGTGCAACTAAGTTTTTTGCGGAGGAAGAATTGAAGAAACTAGAAACAAGCAAATTTGATTTGAGAAAAGGTTCCAAAGTAAGATTTGTTTTGAGCCTAATCTCACGAGTGGTGAAAAATGAAAAGGTTCTTATCTTTTGTCACAACCTTGCACCTGTGAGATTCTTAATAGAGTTATTTGAGAAATATTTTCAGTGGCAAAATGGTAAAGAGATTATGTTACTAACGGGTGAGCTAGACTTGTTTGAAAGAGGGAAAGTGATAGATAAATTTGAAGATCAAAGCAGCGGTTCAAAGATACTTCTTGCTTCAATCAATGCTTGTGCTGAAGGTATAAGTTTAACAGCAGCTTCTAGAGTGATTTTTCTGGACTCTGAGTGGAATCCTTCAAAAACAAAGCAAGCTATTGCACGCGCTTTTCGACCGGGCCAGCAGAAAATGGTTTATGTGTATCAGTTACTGACGACCGGGTCGATGGAAGAAGATAAGTATAGAAGAACTACTTGGAAAGAGTGGGTTTCTTGCATGATTTTCAGTGAGGAGTTTGTGGAAGATCCTTCTAAATGGCAAGCAGAGAAGATTGAAGATGATATACTTAGGGAGATGGTTGAAGAGGATAAGTCTAAAGCTATTCACATGATTATGAAGAATGAAAAGGCTTCAACAATCTAA
Protein sequence

>Msa1171560

MAPIKRHLHQWKHPFDANYPFEAVLNGSWQPVELLKIESGKTTLRFIDTEQIQSTLSSDIRIRSRKATSSDCSSFLRPGIDISMLLGYRYNDNSDPFTSIPMWIDARINSIHRQPHKSDQCSCQFYVNLYDDQGSLGTEVKTLNKEVNAIEIDQIFILQRLQHNTCEGLLKENDTSEIKPYRWDSSEDCSSLSQSRLLVGKFSSDLSWFVITSFLKKVSFHIRSVQNKIVYQVMGNETDIISPWLINVVNFSLKKESLVPIVSQFDVFYDYDGEEDEAPPKPSHEVEGLRRSKRRNVQPERYVGCVVEKLEVGNFRTCPYKRTTYMIEDENSSSDSEEDGGKSDQKVNKVNHCKAINVSTRNKNYDGDGKFKVHKTDDISSKYHYLTNYISCAKKNGVDVLNLEYGNEPTTISSDEEVDGNVTLRNYNSFFKEKIKRKRLHVVDDMDFQTKWEGIHFKKEAPTENFHSSYLSNRSHVHEEQDHKGGRTSNADACKEIIDSYMKNFDSLPTEEEPTVNEKRKETRLLEKKEEEKVSKSNDQEESPDDLDALWEEMNTALTSSYLLDGTAGSTAEVVADTKKESRDSCEHDFRLDEEIGIYCLRCGFVKTAIRDISEPFVECPKRYKEEKQCSEENKEHKSEPKVDEDYNNDMFSTHATDPDEPLTNDIDNVWELIPELEEKMHEHQKKAFEFLWHNIAGSMEPSLMEEKSNSNGGCVISHAPGAGKTFLIISFLVSYLKLFPGKRPLVLAPKTTLYTWRKEFKKWKIPVPVYLIHGRRTSPGSSSTTPKSMILPGFPRPSSDVKHVLDCLRKIQKWHSHPSILVMGYTSFLQLMRSKDTKFAHRKYMAKALRESPGILILDEGHNPRSTKSRLRKCLMKLPTELRILLSGTLFQNNFGEYFNTLCLARPKFVHEVLQELDSKYRRKGGKIAKKERHLLEARARKFFLNNIEKKINSDIDEEKMQGLYVLRKITSGFIDVYDSGNSSETLPGLQIYTLLMNTSDEQHEIVQKLQRKMAESTSYPLEVELLITLGSIHSWLIKTAASCATKFFAEEELKKLETSKFDLRKGSKVRFVLSLISRVVKNEKVLIFCHNLAPVRFLIELFEKYFQWQNGKEIMLLTGELDLFERGKVIDKFEDQSSGSKILLASINACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLTTGSMEEDKYRRTTWKEWVSCMIFSEEFVEDPSKWQAEKIEDDILREMVEEDKSKAIHMIMKNEKASTI*