AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1173910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1173910 MtrunA17_Chr8g0349261 98.316 297 5 0 37 333 1 297 0.0 608
Msa1173910 MtrunA17_Chr7g0247131 68.359 256 74 5 81 332 9 261 1.59e-115 335
Msa1173910 MtrunA17_Chr1g0203411 48.710 310 115 10 37 332 1 280 9.78e-88 265
Msa1173910 MtrunA17_Chr7g0217741 66.667 171 54 3 37 207 1 168 9.17e-78 240
Msa1173910 MtrunA17_Chr6g0453471 61.307 199 61 6 37 231 1 187 3.49e-77 240
Msa1173910 MtrunA17_Chr4g0042671 66.474 173 50 4 37 205 1 169 1.67e-75 238
Msa1173910 MtrunA17_Chr4g0039971 76.923 130 28 2 37 166 2 129 6.18e-70 221
Msa1173910 MtrunA17_Chr2g0281071 73.077 130 34 1 37 166 1 129 8.64e-69 218
Msa1173910 MtrunA17_Chr3g0115821 73.077 130 33 2 37 166 1 128 1.23e-67 215
Msa1173910 MtrunA17_Chr4g0048511 71.538 130 36 1 37 166 1 129 9.22e-67 213
Msa1173910 MtrunA17_Chr5g0434571 73.134 134 34 2 37 170 37 168 1.16e-64 208
Msa1173910 MtrunA17_Chr2g0323411 67.832 143 43 3 37 179 1 140 4.34e-64 206
Msa1173910 MtrunA17_Chr4g0057031 73.282 131 33 2 37 167 1 129 9.16e-64 203
Msa1173910 MtrunA17_Chr5g0395281 70.769 130 36 2 37 166 1 128 1.13e-63 204
Msa1173910 MtrunA17_Chr5g0410961 68.462 130 39 2 37 166 1 128 1.54e-63 205
Msa1173910 MtrunA17_Chr3g0110351 70.896 134 37 2 37 170 1 132 7.69e-63 202
Msa1173910 MtrunA17_Chr7g0228891 70.992 131 36 2 37 167 1 129 3.47e-62 199
Msa1173910 MtrunA17_Chr3g0121241 65.441 136 45 2 32 167 26 159 1.92e-61 198
Msa1173910 MtrunA17_Chr4g0037141 51.323 189 85 3 37 225 1 182 2.28e-61 197
Msa1173910 MtrunA17_Chr1g0187761 72.881 118 30 2 37 154 1 116 4.33e-61 196
Msa1173910 MtrunA17_Chr7g0261281 73.729 118 29 2 37 154 1 116 1.69e-60 195
Msa1173910 MtrunA17_Chr1g0193371 68.182 132 40 2 37 168 1 130 6.16e-60 196
Msa1173910 MtrunA17_Chr3g0131121 64.925 134 45 2 37 170 1 132 7.21e-59 191
Msa1173910 MtrunA17_Chr8g0385321 64.662 133 45 2 37 169 1 131 7.31e-59 192
Msa1173910 MtrunA17_Chr1g0167691 70.588 119 33 2 37 155 1 117 2.96e-58 188
Msa1173910 MtrunA17_Chr1g0167661 69.748 119 34 2 37 155 1 117 4.14e-58 188
Msa1173910 MtrunA17_Chr5g0417821 57.792 154 59 2 47 200 5 152 1.44e-57 187
Msa1173910 MtrunA17_Chr1g0193801 66.667 132 42 2 37 168 1 130 4.42e-57 189
Msa1173910 MtrunA17_Chr7g0270891 66.667 132 42 2 37 168 1 130 5.05e-57 189
Msa1173910 MtrunA17_Chr7g0275911 69.492 118 34 2 37 154 1 116 6.40e-57 185
Msa1173910 MtrunA17_Chr4g0068061 66.116 121 39 2 37 157 1 119 6.72e-57 187
Msa1173910 MtrunA17_Chr7g0274581 63.559 118 41 2 37 154 1 116 2.31e-56 182
Msa1173910 MtrunA17_Chr2g0309911 63.846 130 45 2 42 171 5 132 5.27e-56 184
Msa1173910 MtrunA17_Chr3g0117091 53.061 196 71 6 37 217 1 190 6.66e-56 185
Msa1173910 MtrunA17_Chr7g0271241 66.667 132 42 2 37 168 1 130 3.32e-55 184
Msa1173910 MtrunA17_Chr4g0058631 62.963 135 48 2 37 171 1 133 3.51e-55 184
Msa1173910 MtrunA17_Chr1g0211161 64.122 131 46 1 37 167 1 130 4.49e-55 179
Msa1173910 MtrunA17_Chr8g0346561 67.797 118 36 2 37 154 1 116 9.98e-55 181
Msa1173910 MtrunA17_Chr5g0435101 62.205 127 46 2 39 165 2 126 7.63e-54 176
Msa1173910 MtrunA17_Chr6g0452271 59.848 132 51 2 37 168 1 130 9.25e-54 179
Msa1173910 MtrunA17_Chr4g0060721 66.102 118 38 2 37 154 2 117 3.55e-53 177
Msa1173910 MtrunA17_Chr7g0217221 46.188 223 87 9 37 246 1 203 7.35e-53 175
Msa1173910 MtrunA17_Chr2g0330041 50.303 165 71 3 37 192 1 163 1.06e-52 178
Msa1173910 MtrunA17_Chr3g0092401 47.826 207 98 6 37 240 2 201 2.51e-52 175
Msa1173910 MtrunA17_Chr7g0254411 63.780 127 42 3 37 161 1 125 3.18e-52 175
Msa1173910 MtrunA17_Chr3g0103281 55.152 165 62 6 37 201 1 153 3.34e-52 175
Msa1173910 MtrunA17_Chr4g0044421 60.317 126 49 1 39 164 2 126 3.88e-52 171
Msa1173910 MtrunA17_Chr1g0194951 62.308 130 47 2 37 166 1 128 4.53e-52 176
Msa1173910 MtrunA17_Chr4g0022931 63.559 118 42 1 37 154 1 117 2.43e-51 171
Msa1173910 MtrunA17_Chr4g0022901 63.866 119 42 1 37 155 1 118 4.33e-51 170
Msa1173910 MtrunA17_Chr4g0070611 64.407 118 40 2 37 154 1 116 5.93e-50 168
Msa1173910 MtrunA17_Chr4g0070641 64.407 118 40 2 37 154 1 116 8.34e-50 164
Msa1173910 MtrunA17_Chr8g0342541 60.000 125 48 2 37 161 1 123 9.77e-50 169
Msa1173910 MtrunA17_Chr8g0342521 60.000 125 48 2 37 161 1 123 4.09e-49 167
Msa1173910 MtrunA17_Chr4g0022911 60.504 119 46 1 37 155 1 118 6.20e-49 165
Msa1173910 MtrunA17_Chr4g0028311 57.364 129 54 1 37 165 1 128 1.34e-48 166
Msa1173910 MtrunA17_Chr2g0311221 66.071 112 36 2 38 149 4 113 2.28e-48 165
Msa1173910 MtrunA17_Chr6g0453211 65.487 113 37 2 37 149 1 111 2.70e-48 164
Msa1173910 MtrunA17_Chr7g0269831 67.797 118 36 2 37 154 1 116 1.00e-47 164
Msa1173910 MtrunA17_Chr1g0151941 57.983 119 49 1 37 155 1 118 1.11e-47 161
Msa1173910 MtrunA17_Chr8g0387421 61.017 118 44 2 37 154 1 116 4.08e-47 161
Msa1173910 MtrunA17_Chr7g0264641 58.678 121 49 1 37 157 1 120 4.66e-47 160
Msa1173910 MtrunA17_Chr5g0400821 59.664 119 47 1 37 155 1 118 4.78e-47 161
Msa1173910 MtrunA17_Chr2g0323351 63.025 119 42 2 37 155 1 117 6.23e-47 159
Msa1173910 MtrunA17_Chr3g0135311 59.664 119 47 1 37 155 1 118 6.46e-47 162
Msa1173910 MtrunA17_Chr2g0327351 58.156 141 53 3 37 174 1 138 1.33e-46 160
Msa1173910 MtrunA17_Chr5g0397231 63.393 112 39 2 37 148 1 110 6.28e-46 159
Msa1173910 MtrunA17_Chr8g0342481 59.664 119 47 1 37 155 1 118 7.35e-46 160
Msa1173910 MtrunA17_Chr1g0152011 57.983 119 49 1 37 155 1 118 8.40e-46 159
Msa1173910 MtrunA17_Chr6g0487491 55.906 127 47 2 37 155 1 126 3.04e-45 155
Msa1173910 MtrunA17_Chr4g0032401 56.911 123 52 1 49 171 17 138 4.94e-45 156
Msa1173910 MtrunA17_Chr8g0354661 65.714 105 35 1 49 153 37 140 5.85e-45 161
Msa1173910 MtrunA17_Chr4g0022891 60.000 115 44 2 37 151 1 113 4.14e-44 151
Msa1173910 MtrunA17_Chr2g0328771 62.264 106 39 1 49 154 20 124 5.96e-44 153
Msa1173910 MtrunA17_Chr4g0072751 60.714 112 43 1 37 148 1 111 7.51e-44 154
Msa1173910 MtrunA17_Chr6g0450101 58.824 119 47 2 37 154 1 118 8.51e-44 149
Msa1173910 MtrunA17_Chr3g0088461 60.169 118 46 1 37 154 10 126 1.10e-43 153
Msa1173910 MtrunA17_Chr4g0022881 56.667 120 50 2 37 156 1 118 1.41e-43 149
Msa1173910 MtrunA17_Chr7g0228231 58.824 119 47 2 37 154 1 118 3.65e-43 148
Msa1173910 MtrunA17_Chr1g0168661 60.577 104 40 1 50 153 22 124 1.71e-42 147
Msa1173910 MtrunA17_Chr1g0186061 54.032 124 52 2 50 173 21 139 3.05e-42 147
Msa1173910 MtrunA17_Chr4g0054391 57.658 111 46 1 37 147 1 110 4.84e-42 147
Msa1173910 MtrunA17_Chr1g0203441 52.713 129 59 2 37 165 1 127 1.38e-41 145
Msa1173910 MtrunA17_Chr3g0080861 60.952 105 40 1 49 153 37 140 1.47e-41 151
Msa1173910 MtrunA17_Chr4g0042611 70.000 90 25 2 37 126 1 88 3.05e-41 139
Msa1173910 MtrunA17_Chr3g0099131 60.952 105 40 1 49 153 41 144 3.61e-41 150
Msa1173910 MtrunA17_Chr1g0154031 61.905 105 39 1 49 153 76 179 9.57e-41 147
Msa1173910 MtrunA17_Chr1g0209661 56.250 112 48 1 49 160 27 137 1.27e-40 144
Msa1173910 MtrunA17_Chr1g0180391 60.377 106 41 1 49 154 19 123 1.61e-40 142
Msa1173910 MtrunA17_Chr2g0322521 60.360 111 43 1 43 153 23 132 5.29e-40 145
Msa1173910 MtrunA17_Chr2g0294811 67.778 90 27 2 37 126 1 88 1.44e-39 135
Msa1173910 MtrunA17_Chr1g0194301 48.092 131 67 1 47 177 31 160 2.37e-38 137
Msa1173910 MtrunA17_Chr6g0470971 53.175 126 57 2 46 170 11 135 3.67e-38 137
Msa1173910 MtrunA17_Chr4g0055981 53.782 119 54 1 45 163 51 168 4.75e-38 135
Msa1173910 MtrunA17_Chr1g0194291 55.455 110 48 1 44 153 16 124 1.71e-37 135
Msa1173910 MtrunA17_Chr7g0240821 56.075 107 46 1 54 160 6 111 8.56e-37 132
Msa1173910 MtrunA17_Chr8g0343831 55.660 106 46 1 49 154 8 112 1.09e-36 132
Msa1173910 MtrunA17_Chr2g0327821 56.190 105 45 1 49 153 6 109 1.30e-36 132
Msa1173910 MtrunA17_Chr5g0434931 53.704 108 49 1 48 155 34 140 6.71e-36 131
Msa1173910 MtrunA17_Chr7g0220341 52.632 114 51 2 44 155 20 132 1.82e-35 130
Msa1173910 MtrunA17_Chr4g0030881 54.054 111 43 2 50 153 8 117 2.26e-35 129
Msa1173910 MtrunA17_Chr5g0434831 54.630 108 48 1 48 155 6 112 2.91e-35 127
Msa1173910 MtrunA17_Chr5g0434911 51.852 108 51 1 48 155 20 126 9.46e-35 128
Msa1173910 MtrunA17_Chr2g0293911 56.881 109 46 1 44 152 19 126 3.89e-34 127
Msa1173910 MtrunA17_Chr7g0228991 51.786 112 53 1 44 155 24 134 8.49e-34 125
Msa1173910 MtrunA17_Chr5g0440781 48.673 113 55 3 50 161 13 123 1.11e-33 122
Msa1173910 MtrunA17_Chr4g0068921 57.547 106 44 1 47 152 22 126 1.35e-33 122
Msa1173910 MtrunA17_Chr5g0395221 66.265 83 27 1 44 126 7 88 2.62e-33 118
Msa1173910 MtrunA17_Chr1g0192411 47.200 125 59 2 47 165 10 133 2.65e-33 127
Msa1173910 MtrunA17_Chr5g0441141 48.673 113 55 3 50 161 13 123 8.80e-33 122
Msa1173910 MtrunA17_Chr5g0440761 48.673 113 55 3 50 161 13 123 1.00e-32 122
Msa1173910 MtrunA17_Chr5g0434841 52.778 108 50 1 48 155 19 125 1.21e-32 123
Msa1173910 MtrunA17_Chr8g0360111 54.369 103 46 1 48 150 24 125 1.50e-32 122
Msa1173910 MtrunA17_Chr8g0342511 59.551 89 34 2 37 125 1 87 2.39e-32 116
Msa1173910 MtrunA17_Chr8g0342531 55.102 98 42 2 37 134 1 96 1.24e-31 116
Msa1173910 MtrunA17_Chr5g0441131 47.458 118 59 3 45 161 5 120 1.98e-31 116
Msa1173910 MtrunA17_Chr8g0334881 55.238 105 45 2 49 152 10 113 2.29e-31 120
Msa1173910 MtrunA17_Chr2g0323321 57.447 94 37 2 37 130 1 91 3.01e-31 114
Msa1173910 MtrunA17_Chr8g0342461 57.143 91 38 1 37 127 1 90 4.41e-31 114
Msa1173910 MtrunA17_Chr8g0342471 57.143 91 38 1 37 127 1 90 7.63e-31 114
Msa1173910 MtrunA17_Chr3g0099141 55.952 84 36 1 49 132 40 122 1.25e-30 113
Msa1173910 MtrunA17_Chr4g0008551 51.887 106 47 3 51 155 38 140 1.13e-29 116
Msa1173910 MtrunA17_Chr3g0093811 56.818 88 38 0 81 168 13 100 4.53e-29 112
Msa1173910 MtrunA17_Chr4g0013361 51.429 105 49 2 49 152 10 113 6.30e-29 113
Msa1173910 MtrunA17_Chr6g0454921 48.276 116 56 3 46 160 10 122 6.34e-29 110
Msa1173910 MtrunA17_Chr3g0133601 46.087 115 58 3 45 158 31 142 3.09e-28 109
Msa1173910 MtrunA17_Chr5g0401731 43.382 136 69 4 46 176 10 142 7.42e-28 110
Msa1173910 MtrunA17_Chr5g0429661 40.816 147 77 3 3 148 80 217 2.51e-27 110
Msa1173910 MtrunA17_Chr7g0238631 46.377 138 61 4 49 185 111 236 9.32e-27 110
Msa1173910 MtrunA17_Chr5g0437321 50.495 101 46 3 51 150 19 116 1.06e-26 107
Msa1173910 MtrunA17_Chr4g0053431 50.485 103 49 2 51 153 5 105 5.36e-26 104
Msa1173910 MtrunA17_Chr3g0139671 42.446 139 72 5 49 182 83 218 2.95e-25 106
Msa1173910 MtrunA17_Chr6g0480581 44.800 125 61 4 51 170 4 125 5.42e-25 101
Msa1173910 MtrunA17_Chr4g0058991 49.515 103 50 1 46 148 204 304 8.46e-25 104
Msa1173910 MtrunA17_Chr6g0453751 51.064 94 38 2 48 133 19 112 1.07e-24 97.4
Msa1173910 MtrunA17_Chr7g0229101 60.563 71 28 0 81 151 3 73 1.14e-24 99.4
Msa1173910 MtrunA17_Chr7g0229131 56.000 75 33 0 81 155 3 77 2.73e-24 97.4
Msa1173910 MtrunA17_Chr1g0157731 47.664 107 52 3 49 154 89 192 4.24e-24 103
Msa1173910 MtrunA17_Chr3g0117511 45.045 111 53 4 46 153 178 283 1.31e-23 100
Msa1173910 MtrunA17_Chr7g0228531 34.054 185 93 6 47 226 216 376 1.54e-23 100
Msa1173910 MtrunA17_Chr4g0042621 58.696 92 25 4 122 205 9 95 1.72e-23 99.0
Msa1173910 MtrunA17_Chr5g0425591 46.667 90 46 2 45 133 5 93 5.89e-23 91.3
Msa1173910 MtrunA17_Chr7g0247141 79.592 49 9 1 37 85 1 48 9.05e-23 89.7
Msa1173910 MtrunA17_Chr5g0434901 59.091 66 27 0 86 151 9 74 2.85e-22 90.5
Msa1173910 MtrunA17_Chr6g0460661 43.434 99 52 3 51 148 16 111 2.09e-20 86.7
Msa1173910 MtrunA17_Chr5g0397841 47.000 100 49 3 49 147 108 204 2.90e-20 91.3
Msa1173910 MtrunA17_Chr5g0417621 41.463 123 62 4 33 154 122 235 4.00e-20 90.5
Msa1173910 MtrunA17_Chr1g0177901 50.000 78 38 1 71 148 13 89 4.21e-20 87.0
Msa1173910 MtrunA17_Chr3g0125801 47.115 104 51 3 51 153 16 116 4.95e-20 88.6
Msa1173910 MtrunA17_Chr7g0233061 44.000 100 48 2 51 148 180 273 1.11e-19 88.6
Msa1173910 MtrunA17_Chr7g0228481 31.319 182 102 7 47 226 216 376 1.83e-19 88.6
Msa1173910 MtrunA17_Chr4g0042501 44.231 104 54 3 51 153 105 205 6.50e-19 87.0
Msa1173910 MtrunA17_Chr7g0228401 48.864 88 41 3 62 148 290 374 1.71e-18 86.3
Msa1173910 MtrunA17_Chr6g0460671 35.878 131 74 5 24 153 78 199 7.11e-18 83.2
Msa1173910 MtrunA17_Chr7g0238651 39.062 128 74 3 54 178 10 136 3.48e-17 81.3
Msa1173910 MtrunA17_Chr5g0395231 66.667 51 17 0 116 166 5 55 4.02e-17 79.7
Msa1173910 MtrunA17_Chr5g0416341 41.748 103 52 4 54 153 29 126 7.86e-16 78.2
Msa1173910 MtrunA17_Chr7g0254261 38.655 119 63 4 36 153 80 189 3.69e-15 75.5
Msa1173910 MtrunA17_Chr8g0362231 40.777 103 53 4 54 153 25 122 4.03e-15 75.9
Msa1173910 MtrunA17_Chr1g0193901 49.231 65 31 2 44 107 6 69 3.14e-14 68.2
Msa1173910 MtrunA17_Chr1g0193891 49.231 65 31 2 44 107 6 69 3.14e-14 68.2
Msa1173910 MtrunA17_Chr1g0193871 49.231 65 31 2 44 107 6 69 3.14e-14 68.2
Msa1173910 MtrunA17_Chr1g0193881 49.231 65 31 2 44 107 6 69 3.14e-14 68.2
Msa1173910 MtrunA17_Chr5g0434871 52.273 44 21 0 112 155 2 45 2.45e-13 64.3
Msa1173910 MtrunA17_Chr3g0145551 53.968 63 20 2 130 192 2 55 1.62e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1173910 AT3G61250.1 62.252 302 85 9 37 333 1 278 1.08e-120 349
Msa1173910 AT3G01140.2 65.027 183 56 3 37 213 1 181 5.03e-80 248
Msa1173910 AT5G15310.4 65.318 173 58 2 37 209 1 171 2.94e-79 242
Msa1173910 AT5G15310.2 65.318 173 58 2 37 209 1 171 5.36e-79 244
Msa1173910 AT5G15310.1 65.318 173 58 2 37 209 1 171 5.73e-79 244
Msa1173910 AT3G01140.1 64.444 180 56 3 40 213 47 224 1.71e-76 240
Msa1173910 AT3G02940.2 73.846 130 32 2 37 166 1 128 1.65e-67 214
Msa1173910 AT3G02940.1 73.846 130 32 2 37 166 1 128 4.95e-67 213
Msa1173910 AT3G02940.3 73.846 130 32 2 37 166 1 128 4.95e-67 213
Msa1173910 AT5G10280.1 53.299 197 65 4 37 212 1 191 1.11e-66 213
Msa1173910 AT5G16770.4 73.077 130 33 2 37 166 1 128 1.37e-66 213
Msa1173910 AT5G16770.3 73.077 130 33 2 37 166 1 128 1.37e-66 213
Msa1173910 AT5G16770.1 73.077 130 33 2 37 166 1 128 4.75e-66 211
Msa1173910 AT5G16770.2 73.077 130 33 2 37 166 1 128 4.75e-66 211
Msa1173910 AT1G34670.1 55.080 187 71 3 37 212 1 185 5.66e-66 212
Msa1173910 AT4G05100.1 70.000 130 38 1 37 166 1 129 7.80e-66 210
Msa1173910 AT4G22680.1 72.519 131 34 2 37 167 1 129 2.54e-65 207
Msa1173910 AT4G21440.1 40.940 298 143 7 37 313 1 286 2.56e-65 210
Msa1173910 AT4G12350.1 70.992 131 36 2 37 167 1 129 7.12e-64 204
Msa1173910 AT5G65230.1 70.769 130 36 2 37 166 1 128 1.10e-63 204
Msa1173910 AT3G13540.1 70.312 128 36 2 40 167 15 140 2.22e-63 202
Msa1173910 AT4G28110.1 68.462 130 39 2 37 166 1 128 2.89e-63 202
Msa1173910 AT5G16600.1 71.970 132 35 2 37 168 1 130 4.55e-63 203
Msa1173910 AT4G17785.2 67.692 130 41 1 37 166 1 129 1.47e-62 203
Msa1173910 AT4G17785.1 67.692 130 41 1 37 166 1 129 2.48e-62 202
Msa1173910 AT1G22640.1 49.515 206 95 5 37 239 1 200 7.31e-62 198
Msa1173910 AT3G23250.1 74.576 118 28 2 37 154 1 116 4.12e-61 197
Msa1173910 AT1G06180.1 72.881 118 30 2 37 154 1 116 1.03e-60 195
Msa1173910 AT2G31180.1 72.034 118 31 2 37 154 1 116 2.17e-60 194
Msa1173910 AT2G16720.1 59.864 147 57 2 37 183 1 145 5.07e-60 194
Msa1173910 AT4G09460.1 64.925 134 45 2 37 170 1 132 7.79e-60 192
Msa1173910 AT4G38620.1 66.418 134 43 2 37 170 1 132 8.56e-60 193
Msa1173910 AT1G18570.1 64.925 134 46 1 37 170 1 133 1.60e-59 195
Msa1173910 AT1G09540.1 65.693 137 45 2 37 173 1 135 4.04e-59 194
Msa1173910 AT5G62320.1 50.990 202 64 4 38 222 3 186 5.81e-59 190
Msa1173910 AT5G61420.2 64.925 134 45 2 37 170 1 132 1.75e-58 192
Msa1173910 AT5G14340.1 65.185 135 45 2 33 167 9 141 3.28e-58 189
Msa1173910 AT1G35515.1 63.359 131 46 2 37 167 1 129 5.92e-58 186
Msa1173910 AT1G57560.1 64.394 132 45 2 37 168 1 130 8.38e-58 189
Msa1173910 AT1G57560.2 64.394 132 45 2 37 168 1 130 1.74e-57 187
Msa1173910 AT5G26660.1 64.662 133 45 2 37 169 1 131 5.10e-57 189
Msa1173910 AT5G07700.1 62.590 139 50 2 37 175 1 137 5.40e-57 188
Msa1173910 AT5G07700.2 62.590 139 50 2 37 175 1 137 5.40e-57 188
Msa1173910 AT4G34990.1 64.885 131 44 2 37 167 1 129 7.05e-57 186
Msa1173910 AT5G07690.1 63.636 132 46 2 37 168 1 130 2.15e-56 186
Msa1173910 AT5G60890.1 63.433 134 47 2 37 170 1 132 2.17e-56 185
Msa1173910 AT4G01680.3 66.667 129 41 2 37 165 1 127 5.72e-56 182
Msa1173910 AT5G54230.1 70.339 118 34 1 49 166 12 128 1.53e-55 184
Msa1173910 AT1G08810.1 70.339 118 33 2 37 154 1 116 2.58e-55 182
Msa1173910 AT4G01680.1 66.667 129 41 2 37 165 1 127 3.85e-55 183
Msa1173910 AT1G16490.1 69.231 117 34 2 38 154 4 118 6.15e-55 181
Msa1173910 AT1G79180.1 70.085 117 33 2 38 154 4 118 2.81e-54 180
Msa1173910 AT1G56160.1 69.231 117 34 2 38 154 4 118 4.65e-54 179
Msa1173910 AT5G49330.1 56.757 148 61 3 37 183 1 146 8.66e-54 180
Msa1173910 AT1G74650.1 67.769 121 37 2 37 157 1 119 1.06e-53 179
Msa1173910 AT1G74080.1 61.832 131 48 2 37 167 1 129 1.23e-53 179
Msa1173910 AT1G74430.1 64.179 134 46 2 37 170 1 132 1.57e-53 177
Msa1173910 AT3G47600.1 67.769 121 37 2 37 157 1 119 2.77e-53 178
Msa1173910 AT2G47460.1 68.644 118 35 2 37 154 1 116 3.26e-53 179
Msa1173910 AT5G56110.1 59.848 132 51 2 37 168 1 130 1.03e-52 176
Msa1173910 AT5G62470.2 67.797 118 36 2 37 154 1 116 2.21e-52 176
Msa1173910 AT3G12820.1 69.231 117 34 2 39 155 5 119 3.09e-52 172
Msa1173910 AT3G62610.1 67.797 118 36 2 37 154 1 116 3.22e-52 176
Msa1173910 AT3G28910.1 67.797 118 36 2 37 154 1 116 9.42e-52 174
Msa1173910 AT4G01680.2 60.993 141 41 3 37 165 1 139 1.07e-51 174
Msa1173910 AT1G18710.1 63.359 131 46 2 37 167 1 129 1.20e-51 172
Msa1173910 AT5G62470.1 67.797 118 35 3 37 154 1 115 6.74e-51 172
Msa1173910 AT3G12720.1 56.934 137 56 3 33 169 8 141 1.94e-50 170
Msa1173910 AT4G37780.1 62.185 119 44 1 37 155 1 118 6.83e-50 169
Msa1173910 AT3G13890.2 63.025 119 42 2 37 155 1 117 1.20e-49 169
Msa1173910 AT3G28470.1 52.353 170 67 4 37 194 1 168 9.31e-49 166
Msa1173910 AT2G36890.2 53.333 150 68 2 21 169 26 174 1.18e-48 166
Msa1173910 AT1G79180.2 54.667 150 33 3 38 154 4 151 1.67e-47 163
Msa1173910 AT2G36890.1 56.716 134 56 2 37 169 1 133 3.08e-47 161
Msa1173910 AT3G49690.1 60.504 119 46 1 37 155 1 118 4.62e-47 161
Msa1173910 AT1G63910.1 61.017 118 44 2 37 154 1 116 5.64e-47 163
Msa1173910 AT3G13890.1 58.594 128 42 3 37 155 1 126 1.42e-46 162
Msa1173910 AT5G57620.1 59.664 119 47 1 37 155 1 118 1.85e-46 160
Msa1173910 AT5G23000.1 58.824 119 48 1 37 155 1 118 4.05e-46 159
Msa1173910 AT2G32460.2 66.038 106 35 1 48 153 5 109 4.94e-46 163
Msa1173910 AT2G32460.1 66.038 106 35 1 48 153 17 121 5.48e-46 163
Msa1173910 AT5G65790.1 58.824 119 48 1 37 155 1 118 5.90e-46 160
Msa1173910 AT5G55020.1 61.207 116 43 2 44 159 21 134 3.68e-44 159
Msa1173910 AT3G08500.1 62.162 111 41 1 44 154 25 134 9.31e-44 154
Msa1173910 AT5G40350.1 60.909 110 42 1 49 158 17 125 1.23e-43 149
Msa1173910 AT5G14750.1 41.398 186 88 4 50 233 17 183 1.79e-43 149
Msa1173910 AT5G12870.1 62.385 109 40 1 49 157 18 125 3.78e-43 150
Msa1173910 AT3G27810.1 61.321 106 40 1 49 154 20 124 4.57e-43 148
Msa1173910 AT4G26930.1 63.462 104 37 1 49 152 19 121 1.17e-42 152
Msa1173910 AT3G24310.1 61.321 106 40 1 48 153 17 121 1.53e-42 148
Msa1173910 AT3G01530.1 61.321 106 40 1 49 154 25 129 2.48e-42 146
Msa1173910 AT4G13480.1 62.500 104 38 1 50 153 7 109 3.63e-42 147
Msa1173910 AT1G25340.1 52.756 127 57 2 50 174 19 144 1.02e-41 147
Msa1173910 AT5G06100.1 57.547 106 44 1 48 153 31 135 1.28e-41 150
Msa1173910 AT3G11440.2 58.095 105 43 1 49 153 41 144 3.32e-41 150
Msa1173910 AT5G40330.1 58.095 105 43 1 50 154 13 116 3.99e-41 143
Msa1173910 AT5G06100.5 57.547 106 44 1 48 153 31 135 4.69e-41 150
Msa1173910 AT5G06100.2 57.547 106 44 1 48 153 31 135 4.69e-41 150
Msa1173910 AT5G06100.3 57.547 106 44 1 48 153 31 135 4.69e-41 150
Msa1173910 AT5G06100.4 57.547 106 44 1 48 153 31 135 4.69e-41 150
Msa1173910 AT3G11440.3 58.095 105 43 1 49 153 41 144 1.39e-40 149
Msa1173910 AT3G11440.4 58.095 105 43 1 49 153 41 144 1.39e-40 149
Msa1173910 AT3G11440.1 58.095 105 43 1 49 153 41 144 1.39e-40 149
Msa1173910 AT3G27920.1 56.604 106 45 1 50 155 15 119 2.02e-40 142
Msa1173910 AT5G35550.1 56.098 123 49 2 49 171 14 131 2.24e-40 142
Msa1173910 AT3G30210.1 58.095 105 43 1 48 152 26 129 2.90e-40 142
Msa1173910 AT2G26960.1 58.772 114 45 2 46 159 17 128 7.45e-40 145
Msa1173910 AT1G68320.1 56.250 112 48 1 49 160 19 129 1.78e-39 141
Msa1173910 AT3G46130.1 59.434 106 42 1 48 153 8 112 2.90e-39 139
Msa1173910 AT5G59780.3 59.615 104 41 1 50 153 9 111 7.13e-39 138
Msa1173910 AT5G26660.2 68.966 87 27 0 83 169 14 100 9.46e-39 140
Msa1173910 AT5G52600.1 47.059 136 62 2 44 170 7 141 2.39e-38 135
Msa1173910 AT3G53200.1 58.095 105 43 1 49 153 9 112 2.01e-37 134
Msa1173910 AT1G25340.2 50.394 127 55 3 50 174 19 139 2.25e-37 135
Msa1173910 AT2G47190.1 51.754 114 54 1 40 153 11 123 2.56e-37 135
Msa1173910 AT1G25340.3 50.394 127 55 3 50 174 19 139 3.91e-37 135
Msa1173910 AT1G48000.1 56.731 104 44 1 49 152 32 134 3.34e-36 131
Msa1173910 AT1G66370.1 55.556 117 46 2 37 153 1 111 4.23e-36 131
Msa1173910 AT5G52260.1 55.000 120 49 2 36 155 3 117 2.15e-35 130
Msa1173910 AT3G48920.1 49.618 131 59 3 45 175 14 137 3.48e-35 129
Msa1173910 AT3G06490.1 54.098 122 55 1 44 165 14 134 4.05e-35 130
Msa1173910 AT4G25560.1 55.660 106 46 1 50 155 11 115 1.00e-34 128
Msa1173910 AT5G49620.1 55.455 110 48 1 43 152 20 128 9.96e-33 124
Msa1173910 AT1G66380.1 57.798 109 45 1 45 153 4 111 3.09e-32 117
Msa1173910 AT3G47600.2 75.000 72 18 0 83 154 39 110 4.79e-32 122
Msa1173910 AT5G14750.3 39.264 163 74 4 78 233 5 149 5.70e-32 118
Msa1173910 AT3G12820.2 71.831 71 20 0 85 155 1 71 7.84e-32 118
Msa1173910 AT1G22640.3 43.836 146 75 3 97 239 2 143 8.60e-32 118
Msa1173910 AT1G56650.1 57.798 109 45 1 45 153 4 111 1.39e-31 119
Msa1173910 AT2G26950.1 48.246 114 57 2 46 159 13 124 7.53e-31 120
Msa1173910 AT5G35550.2 59.574 94 34 1 78 171 45 134 1.51e-30 117
Msa1173910 AT3G60460.1 51.852 108 50 2 46 152 8 114 1.90e-30 117
Msa1173910 AT1G66390.1 56.881 109 46 1 45 153 4 111 4.59e-30 115
Msa1173910 AT3G46130.3 66.667 72 24 0 82 153 9 80 1.04e-29 113
Msa1173910 AT5G40350.2 63.158 76 28 0 83 158 5 80 1.31e-29 111
Msa1173910 AT3G27810.2 63.889 72 26 0 83 154 4 75 1.99e-29 111
Msa1173910 AT5G59780.2 67.606 71 23 0 83 153 20 90 2.17e-29 112
Msa1173910 AT3G46130.4 67.606 71 23 0 83 153 20 90 2.30e-29 113
Msa1173910 AT3G53200.2 64.789 71 25 0 83 153 9 79 2.45e-29 112
Msa1173910 AT5G49620.2 49.194 124 48 2 43 152 20 142 3.91e-29 114
Msa1173910 AT1G18960.1 46.512 129 56 4 43 168 5 123 7.52e-28 110
Msa1173910 AT3G09230.1 51.376 109 43 3 51 155 55 157 1.99e-27 111
Msa1173910 AT3G55730.1 50.467 107 43 3 51 153 56 156 1.23e-26 108
Msa1173910 AT5G15310.3 57.143 84 36 0 126 209 9 92 2.93e-26 105
Msa1173910 AT3G23250.2 75.862 58 14 0 97 154 2 59 7.04e-26 103
Msa1173910 AT1G71030.2 50.588 85 42 0 89 173 5 89 8.44e-26 102
Msa1173910 AT2G39880.1 48.598 107 45 3 51 153 50 150 1.08e-25 105
Msa1173910 AT1G71030.1 50.588 85 42 0 89 173 19 103 1.30e-25 102
Msa1173910 AT3G50060.1 47.706 109 51 4 51 158 6 109 2.41e-25 103
Msa1173910 AT4G18770.1 45.946 111 54 2 46 154 212 318 2.48e-25 105
Msa1173910 AT5G02320.1 51.402 107 48 3 49 154 125 228 2.56e-25 106
Msa1173910 AT5G02320.2 51.402 107 48 3 49 154 125 228 2.56e-25 106
Msa1173910 AT5G02320.3 51.402 107 48 3 49 154 65 168 2.58e-25 106
Msa1173910 AT5G11510.3 50.467 107 49 3 49 154 79 182 3.27e-25 107
Msa1173910 AT5G11510.1 50.467 107 49 3 49 154 79 182 3.27e-25 107
Msa1173910 AT5G11510.4 50.467 107 49 3 49 154 79 182 3.27e-25 107
Msa1173910 AT5G11510.5 50.467 107 49 3 49 154 79 182 3.44e-25 107
Msa1173910 AT5G11510.2 50.467 107 49 3 49 154 79 182 3.49e-25 107
Msa1173910 AT5G67300.1 43.182 132 67 5 51 181 6 130 4.90e-25 103
Msa1173910 AT5G40360.1 46.226 106 54 3 49 154 156 258 1.21e-24 102
Msa1173910 AT3G27785.1 50.485 103 47 3 46 147 184 283 4.15e-24 102
Msa1173910 AT3G09370.2 50.459 109 44 3 49 153 133 235 4.18e-24 103
Msa1173910 AT3G09370.1 50.459 109 44 3 49 153 128 230 4.45e-24 102
Msa1173910 AT3G09370.3 50.459 109 44 3 49 153 141 243 5.66e-24 102
Msa1173910 AT2G23290.1 49.038 104 49 3 51 153 13 113 5.67e-24 100
Msa1173910 AT5G58850.1 46.154 104 54 1 45 148 99 200 1.17e-23 101
Msa1173910 AT4G37260.1 47.115 104 51 3 51 153 13 113 1.43e-23 99.4
Msa1173910 AT1G17950.1 47.222 108 53 3 47 153 1 105 1.87e-23 97.4
Msa1173910 AT4G32730.5 45.794 107 54 3 49 154 85 188 7.65e-23 100
Msa1173910 AT4G32730.4 45.794 107 54 3 49 154 85 188 7.65e-23 100
Msa1173910 AT4G32730.3 45.794 107 54 3 49 154 85 188 7.65e-23 100
Msa1173910 AT4G32730.2 45.794 107 54 3 49 154 85 188 7.65e-23 100
Msa1173910 AT4G32730.1 45.794 107 54 3 49 154 85 188 7.85e-23 99.8
Msa1173910 AT5G14750.4 36.691 139 68 3 97 233 2 122 2.51e-22 91.7
Msa1173910 AT5G14750.2 36.691 139 68 3 97 233 2 122 2.51e-22 91.7
Msa1173910 AT1G66380.3 59.740 77 31 0 77 153 2 78 3.54e-22 90.1
Msa1173910 AT5G11050.1 46.465 99 49 3 51 148 105 200 4.08e-22 96.7
Msa1173910 AT4G00540.2 47.706 109 52 3 49 154 101 207 1.05e-21 95.5
Msa1173910 AT1G73410.1 48.077 104 50 3 51 153 6 106 1.66e-21 92.0
Msa1173910 AT4G00540.1 47.706 109 52 3 49 154 99 205 2.40e-21 94.7
Msa1173910 AT1G73410.2 48.077 104 50 3 51 153 6 106 4.00e-21 90.1
Msa1173910 AT4G33450.1 42.241 116 57 4 39 153 13 119 1.03e-20 90.1
Msa1173910 AT1G69560.1 42.727 110 61 1 45 154 101 208 1.20e-20 91.3
Msa1173910 AT1G69560.2 42.727 110 61 1 45 154 117 224 1.52e-20 91.3
Msa1173910 AT2G25230.1 42.727 110 58 4 46 154 21 126 6.92e-20 87.4
Msa1173910 AT1G26780.1 43.810 105 57 1 49 153 96 198 4.10e-19 86.3
Msa1173910 AT1G66380.2 53.409 88 40 1 45 132 4 90 4.15e-19 82.0
Msa1173910 AT1G26780.2 43.810 105 57 1 49 153 96 198 6.54e-19 86.7
Msa1173910 AT5G61420.1 71.154 52 15 0 119 170 2 53 1.99e-18 84.3
Msa1173910 AT3G29020.1 38.095 105 61 3 51 154 65 166 8.14e-17 79.0
Msa1173910 AT3G29020.2 38.095 105 61 3 51 154 67 168 2.05e-16 79.0
Msa1173910 AT5G17800.1 41.748 103 58 2 51 153 93 193 2.18e-16 79.3
Msa1173910 AT5G59780.1 65.217 46 16 0 108 153 1 46 8.60e-16 74.7
Msa1173910 AT2G37630.1 36.220 127 78 2 54 178 7 132 8.90e-16 77.8
Msa1173910 AT1G22640.2 36.567 134 76 4 126 254 16 145 1.15e-15 74.7
Msa1173910 AT3G46130.2 65.217 46 16 0 108 153 1 46 1.19e-15 74.7
Msa1173910 AT5G40430.1 43.478 69 38 1 86 154 86 153 2.57e-15 75.1
Msa1173910 AT4G28110.2 70.732 41 12 0 126 166 4 44 6.13e-15 72.8
Msa1173910 AT2G02820.3 39.000 100 59 1 54 153 33 130 6.87e-15 74.7
Msa1173910 AT1G74650.3 69.767 43 13 0 115 157 1 43 1.42e-14 72.8
Msa1173910 AT2G02820.1 39.000 100 59 2 54 153 33 130 1.66e-14 74.3
Msa1173910 AT2G02820.2 39.000 100 59 2 54 153 33 130 2.46e-14 73.9
Msa1173910 AT1G14350.2 39.000 100 59 1 54 153 28 125 2.69e-14 73.9
Msa1173910 AT1G14350.1 39.000 100 59 1 54 153 28 125 2.69e-14 73.9
Msa1173910 AT3G28910.2 70.000 40 12 0 115 154 1 40 4.12e-13 68.6
Msa1173910 AT1G74430.2 57.895 57 23 1 115 170 7 63 5.67e-13 67.4
Msa1173910 AT4G25560.2 55.319 47 21 0 109 155 3 49 2.96e-12 65.5
Msa1173910 AT1G14350.3 48.333 60 31 0 94 153 23 82 1.40e-11 65.5
Msa1173910 AT1G14350.4 48.333 60 31 0 94 153 23 82 1.40e-11 65.5
Msa1173910 AT5G39700.1 34.821 112 70 3 44 155 49 157 1.45e-11 63.2
Msa1173910 AT5G14340.2 59.524 42 17 0 126 167 10 51 6.20e-11 61.2

Find 53 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACGAATTTGATTTGGAAAT+TGG 0.082125 8_1:+4621304 None:intergenic
CAATAACAACATTCCTTCTT+TGG 0.206897 8_1:-4621197 Msa1173910:CDS
CTGACTATTTCCTTAAGATA+TGG 0.244127 8_1:-4621156 Msa1173910:CDS
ACCTTGTTGTGATAGCAAAA+TGG 0.255210 8_1:-4623407 Msa1173910:CDS
ACAATGAGATCAAGAATTTA+TGG 0.255794 8_1:-4621408 Msa1173910:CDS
CACTGCACTGCAACTCTTGT+TGG 0.308906 8_1:-4620882 Msa1173910:CDS
GGCGATAGACGAATTTGATT+TGG 0.316330 8_1:+4621297 None:intergenic
ATCTCATTGTCAGTTCTTCC+TGG 0.339461 8_1:+4621421 None:intergenic
CTTCAGAGTTCCATATCTTA+AGG 0.345177 8_1:+4621146 None:intergenic
CCTTGTTGTGATAGCAAAAT+GGG 0.345722 8_1:-4623406 Msa1173910:CDS
ACGAATTTGATTTGGAAATT+GGG 0.374944 8_1:+4621305 None:intergenic
AAGGGACCGCGTTTAATATC+AGG 0.376248 8_1:+4622136 None:intergenic
CACGCGCCACATGGCTCAAT+GGG 0.396446 8_1:-4621275 Msa1173910:CDS
TTTGAGAGAGAAGAGAAAAT+GGG 0.415991 8_1:-4623436 Msa1173910:CDS
CCACGCGCCACATGGCTCAA+TGG 0.417264 8_1:-4621276 Msa1173910:CDS
CTTCTTGAGACATTGAACTT+TGG 0.418411 8_1:+4621059 None:intergenic
CGTTCTCTTCCTAAGTTAGC+AGG 0.426052 8_1:-4623301 Msa1173910:intron
AAAATGGTGGTCACGGAAGC+TGG 0.430036 8_1:-4623324 Msa1173910:CDS
AAGCTCATGTCATTGTTAGA+AGG 0.433035 8_1:+4620854 None:intergenic
TTCATGCCATCCTTGGAAAC+AGG 0.458279 8_1:-4622081 Msa1173910:intron
ATACAGCTTCATGCCATCCT+TGG 0.465045 8_1:-4622088 Msa1173910:CDS
AGCAAAATGGGGTTGAAGAA+AGG 0.478127 8_1:-4623394 Msa1173910:CDS
GTAAGAGTTGCCGACTAAGA+TGG 0.486498 8_1:-4622174 Msa1173910:CDS
AAGATATGGAACTCTGAAGT+TGG 0.497165 8_1:-4621142 Msa1173910:CDS
AACTCTTACCGCAACGAAGA+AGG 0.505550 8_1:+4622188 None:intergenic
GCTATTGGTTCATGAGTTTG+TGG 0.511715 8_1:+4621343 None:intergenic
AAAGTACCTGTTTCCAAGGA+TGG 0.520875 8_1:+4622075 None:intergenic
AAAGAAACGTCTCATATGCA+TGG 0.523969 8_1:-4621374 Msa1173910:CDS
TCAATTGCCTCTCAGCTACC+AGG 0.524112 8_1:-4621439 Msa1173910:CDS
CACTTTCCCATTGAGCCATG+TGG 0.525677 8_1:+4621269 None:intergenic
TCATCTTCTTCAGTAGTCCA+TGG 0.528564 8_1:+4623370 None:intergenic
CAAGAAAGTACCTGTTTCCA+AGG 0.540593 8_1:+4622071 None:intergenic
CAAAGTTCAATGTCTCAAGA+AGG 0.548341 8_1:-4621058 Msa1173910:CDS
AACTACAAGTCATTTGATGT+AGG 0.555746 8_1:-4620950 Msa1173910:CDS
CTCGTCGTCTGATTTGCGAC+CGG 0.558757 8_1:+4621105 None:intergenic
TGTAATAACAACAACAAATG+TGG 0.560142 8_1:-4621028 Msa1173910:CDS
TACTACAACAAGCAATGTGA+TGG 0.566980 8_1:-4620990 Msa1173910:CDS
AAGAAACGTCTCATATGCAT+GGG 0.571800 8_1:-4621373 Msa1173910:CDS
CTTTCAGGCCTTCTTCGTTG+CGG 0.574007 8_1:-4622196 Msa1173910:intron
AGTAGTTTGTCCATCTTAGT+CGG 0.577640 8_1:+4622164 None:intergenic
TGGGGTTGAAGAAAGGTCCA+TGG 0.581977 8_1:-4623387 Msa1173910:CDS
AAGTAATGTGATGAGGCTAT+TGG 0.582396 8_1:+4621328 None:intergenic
CAAGACTTGAAGCAGAAGCA+AGG 0.585545 8_1:-4621246 Msa1173910:CDS
AAAGTTCAATGTCTCAAGAA+GGG 0.602530 8_1:-4621057 Msa1173910:CDS
CCATTGAGCCATGTGGCGCG+TGG 0.604740 8_1:+4621276 None:intergenic
TACAACAAGCAATGTGATGG+AGG 0.620346 8_1:-4620987 Msa1173910:CDS
ACGCGGTCCCTTTACACCTG+AGG 0.638908 8_1:-4622125 Msa1173910:CDS
TTTAGAACAATCATGCACAC+TGG 0.662781 8_1:+4623487 None:intergenic
AGTTCTTCCTGGTAGCTGAG+AGG 0.678055 8_1:+4621432 None:intergenic
CGGTCGCAAATCAGACGACG+AGG 0.685981 8_1:-4621104 Msa1173910:CDS
AATTGGGAAGTAATGTGATG+AGG 0.686160 8_1:+4621321 None:intergenic
CTTGTTGTGATAGCAAAATG+GGG 0.743889 8_1:-4623405 Msa1173910:CDS
TTGAGACCTGATATTAAACG+CGG 0.759015 8_1:-4622142 Msa1173910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATGTTTTTTTATGAAAT+AGG - chr8_1:4621487-4621506 Msa1173910:intron 10.0%
!!! GTTAATTTTATCAAGAAAAA+TGG - chr8_1:4621030-4621049 Msa1173910:CDS 15.0%
!!! CTATTATTTAGTTTTTTTCA+AGG + chr8_1:4622080-4622099 None:intergenic 15.0%
!!! AATTTTATCAAGAAAAATGG+TGG - chr8_1:4621033-4621052 Msa1173910:CDS 20.0%
!! TAAAAACAGTTTATAGCTAA+TGG - chr8_1:4621284-4621303 Msa1173910:CDS 20.0%
!! AAAAACAGTTTATAGCTAAT+GGG - chr8_1:4621285-4621304 Msa1173910:CDS 20.0%
!!! TTTTTAACCTAACTTTTCAT+TGG - chr8_1:4621438-4621457 Msa1173910:CDS 20.0%
!!! TAAAAAGTACAAACCAATAA+AGG + chr8_1:4621557-4621576 None:intergenic 20.0%
!! TTACCTAAGAAGTTATTATT+AGG - chr8_1:4621574-4621593 Msa1173910:intron 20.0%
!! TATCCTAATAATAACTTCTT+AGG + chr8_1:4621580-4621599 None:intergenic 20.0%
!! GGATAATAATATTGTCTTAA+AGG - chr8_1:4621595-4621614 Msa1173910:intron 20.0%
!! TTGTTTGTATTCAATATTCA+TGG - chr8_1:4621650-4621669 Msa1173910:intron 20.0%
!!! TTCATATTTAGAACACAAAA+TGG + chr8_1:4621866-4621885 None:intergenic 20.0%
!! ACATTCATAGAAACAAAAAA+AGG + chr8_1:4621993-4622012 None:intergenic 20.0%
!!! TTCATTTTTACATAGAAGTT+TGG + chr8_1:4622495-4622514 None:intergenic 20.0%
!! TCAGTAATAATTTAAGAAAG+TGG + chr8_1:4622740-4622759 None:intergenic 20.0%
!! AAATTCTTAAAATATAGCCT+TGG + chr8_1:4622879-4622898 None:intergenic 20.0%
! TATTTCTTCCTAAACACATA+AGG + chr8_1:4621132-4621151 None:intergenic 25.0%
! TGTGTTTAGGAAGAAATATA+AGG - chr8_1:4621134-4621153 Msa1173910:CDS 25.0%
! AAGAAATATAAGGCTATGTT+TGG - chr8_1:4621144-4621163 Msa1173910:CDS 25.0%
!! GTTTGTTAAACAAATGTGTT+TGG - chr8_1:4621516-4621535 Msa1173910:intron 25.0%
!!! GATTTTTTGTGATCCTTTAT+TGG - chr8_1:4621541-4621560 Msa1173910:intron 25.0%
! TGAAAGTGAAGGTAAAATAT+TGG + chr8_1:4621944-4621963 None:intergenic 25.0%
! AACTTAAAATCGTCAAAGAA+AGG + chr8_1:4622145-4622164 None:intergenic 25.0%
!!! TAAGTTTTTTCGTTTCTTTC+AGG - chr8_1:4622159-4622178 Msa1173910:CDS 25.0%
! TAGTCAAAAGTAAAAGGAAT+AGG + chr8_1:4622403-4622422 None:intergenic 25.0%
! AAACAGACACTAAATAAGTT+TGG + chr8_1:4622426-4622445 None:intergenic 25.0%
! AAACTTATTTAGTGTCTGTT+TGG - chr8_1:4622425-4622444 Msa1173910:intron 25.0%
! AAACTCAGTAAATGAGTATT+TGG - chr8_1:4622520-4622539 Msa1173910:intron 25.0%
! AACAAATGAAACAATTTCAC+AGG - chr8_1:4622902-4622921 Msa1173910:intron 25.0%
! ACAATGAGATCAAGAATTTA+TGG - chr8_1:4622962-4622981 Msa1173910:intron 25.0%
!!! ACGAATTTGATTTGGAAATT+GGG + chr8_1:4623068-4623087 None:intergenic 25.0%
! TGTAATAACAACAACAAATG+TGG - chr8_1:4623342-4623361 Msa1173910:CDS 25.0%
TTCTCTCTCAAAAAATGCAA+TGG + chr8_1:4620926-4620945 None:intergenic 30.0%
!! TTTTGAGAGAGAAGAGAAAA+TGG - chr8_1:4620933-4620952 Msa1173910:CDS 30.0%
TTTGAGAGAGAAGAGAAAAT+GGG - chr8_1:4620934-4620953 Msa1173910:CDS 30.0%
CTTAAAAAACCTGCTAACTT+AGG + chr8_1:4621081-4621100 None:intergenic 30.0%
CTTAGTTTCATAAGCTAACT+AGG - chr8_1:4621253-4621272 Msa1173910:CDS 30.0%
ATCTATGCCAATGAAAAGTT+AGG + chr8_1:4621448-4621467 None:intergenic 30.0%
AGAGAAAGTTCCAATCTTTA+TGG - chr8_1:4621621-4621640 Msa1173910:intron 30.0%
ACAAACACAACCATAAAGAT+TGG + chr8_1:4621634-4621653 None:intergenic 30.0%
TAAAAAAGAAGAGCAGAAAG+AGG + chr8_1:4621739-4621758 None:intergenic 30.0%
AAAAAGCCAAGAATATGAGA+AGG - chr8_1:4621776-4621795 Msa1173910:intron 30.0%
AAAAGCCAAGAATATGAGAA+GGG - chr8_1:4621777-4621796 Msa1173910:intron 30.0%
! ATTTTCCCTTCTCATATTCT+TGG + chr8_1:4621785-4621804 None:intergenic 30.0%
! AAGGGAAAATTTGAAGTAGA+AGG - chr8_1:4621795-4621814 Msa1173910:intron 30.0%
AGATAACATACTGCTTGTAA+AGG + chr8_1:4621831-4621850 None:intergenic 30.0%
! GTTTGGTAGTCAAAAGTAAA+AGG + chr8_1:4622409-4622428 None:intergenic 30.0%
TTGACCATTGAAATACCTTT+CGG - chr8_1:4622612-4622631 Msa1173910:intron 30.0%
AATGTTGTATCTGATGTTTG+TGG - chr8_1:4622784-4622803 Msa1173910:intron 30.0%
! AAATATAGCCTTGGAGAAAA+TGG + chr8_1:4622870-4622889 None:intergenic 30.0%
AAATGAAACAATTTCACAGG+TGG - chr8_1:4622905-4622924 Msa1173910:intron 30.0%
AATGAAACAATTTCACAGGT+GGG - chr8_1:4622906-4622925 Msa1173910:intron 30.0%
!! GACGAATTTGATTTGGAAAT+TGG + chr8_1:4623069-4623088 None:intergenic 30.0%
CAATAACAACATTCCTTCTT+TGG - chr8_1:4623173-4623192 Msa1173910:intron 30.0%
CTGACTATTTCCTTAAGATA+TGG - chr8_1:4623214-4623233 Msa1173910:intron 30.0%
AAAGTTCAATGTCTCAAGAA+GGG - chr8_1:4623313-4623332 Msa1173910:CDS 30.0%
AACTACAAGTCATTTGATGT+AGG - chr8_1:4623420-4623439 Msa1173910:CDS 30.0%
! TTTAGAACAATCATGCACAC+TGG + chr8_1:4620886-4620905 None:intergenic 35.0%
! ACCTTGTTGTGATAGCAAAA+TGG - chr8_1:4620963-4620982 Msa1173910:CDS 35.0%
! CCTTGTTGTGATAGCAAAAT+GGG - chr8_1:4620964-4620983 Msa1173910:CDS 35.0%
! CTTGTTGTGATAGCAAAATG+GGG - chr8_1:4620965-4620984 Msa1173910:CDS 35.0%
ATCAAGAAAAATGGTGGTCA+CGG - chr8_1:4621039-4621058 Msa1173910:CDS 35.0%
! TTTTCCCTCCTTATGTGTTT+AGG - chr8_1:4621121-4621140 Msa1173910:CDS 35.0%
TCTTCCTAAACACATAAGGA+GGG + chr8_1:4621128-4621147 None:intergenic 35.0%
TTCTTCCTAAACACATAAGG+AGG + chr8_1:4621129-4621148 None:intergenic 35.0%
ATGCACACTTATGATCAGTT+TGG + chr8_1:4621416-4621435 None:intergenic 35.0%
AGACAAACAGAAAGACATGA+TGG + chr8_1:4621910-4621929 None:intergenic 35.0%
TGTGAATCAGATGAAAGTGA+AGG + chr8_1:4621955-4621974 None:intergenic 35.0%
AAGGTTTGATATTGCAGTTG+CGG + chr8_1:4622061-4622080 None:intergenic 35.0%
! AGTAGTTTGTCCATCTTAGT+CGG + chr8_1:4622209-4622228 None:intergenic 35.0%
TTGAGACCTGATATTAAACG+CGG - chr8_1:4622228-4622247 Msa1173910:intron 35.0%
! TTTTCTTCCTCAGGTGTAAA+GGG + chr8_1:4622255-4622274 None:intergenic 35.0%
! TTTTTCTTCCTCAGGTGTAA+AGG + chr8_1:4622256-4622275 None:intergenic 35.0%
!!! ATGACTAGTTTTTCTTCCTC+AGG + chr8_1:4622264-4622283 None:intergenic 35.0%
! GTACTTTCTTGAGTTCCTTT+TGG - chr8_1:4622311-4622330 Msa1173910:intron 35.0%
TGAGTTAAACGAAATCACGT+TGG - chr8_1:4622456-4622475 Msa1173910:intron 35.0%
!! CACATGTGTTAGTGTTGTTT+CGG + chr8_1:4622701-4622720 None:intergenic 35.0%
! TTTCATGTCCATTTTCTCCA+AGG - chr8_1:4622859-4622878 Msa1173910:intron 35.0%
AAAGAAACGTCTCATATGCA+TGG - chr8_1:4622996-4623015 Msa1173910:intron 35.0%
AAGAAACGTCTCATATGCAT+GGG - chr8_1:4622997-4623016 Msa1173910:intron 35.0%
AAGTAATGTGATGAGGCTAT+TGG + chr8_1:4623045-4623064 None:intergenic 35.0%
AATTGGGAAGTAATGTGATG+AGG + chr8_1:4623052-4623071 None:intergenic 35.0%
CTTCAGAGTTCCATATCTTA+AGG + chr8_1:4623227-4623246 None:intergenic 35.0%
!! AAGATATGGAACTCTGAAGT+TGG - chr8_1:4623228-4623247 Msa1173910:intron 35.0%
CTTCTTGAGACATTGAACTT+TGG + chr8_1:4623314-4623333 None:intergenic 35.0%
CAAAGTTCAATGTCTCAAGA+AGG - chr8_1:4623312-4623331 Msa1173910:CDS 35.0%
TACTACAACAAGCAATGTGA+TGG - chr8_1:4623380-4623399 Msa1173910:CDS 35.0%
!! ATGTGATGGAGGATTTTGAA+TGG - chr8_1:4623394-4623413 Msa1173910:CDS 35.0%
AAGCTCATGTCATTGTTAGA+AGG + chr8_1:4623519-4623538 None:intergenic 35.0%
!! CCCATTTTGCTATCACAACA+AGG + chr8_1:4620967-4620986 None:intergenic 40.0%
AGCAAAATGGGGTTGAAGAA+AGG - chr8_1:4620976-4620995 Msa1173910:CDS 40.0%
TCATCTTCTTCAGTAGTCCA+TGG + chr8_1:4621003-4621022 None:intergenic 40.0%
! AAAGTACCTGTTTCCAAGGA+TGG + chr8_1:4622298-4622317 None:intergenic 40.0%
!! CAAGAAAGTACCTGTTTCCA+AGG + chr8_1:4622302-4622321 None:intergenic 40.0%
CTGCTGAAACTAAGTCCAAA+AGG + chr8_1:4622329-4622348 None:intergenic 40.0%
GAACATGGTTCATCTACTGA+GGG + chr8_1:4622639-4622658 None:intergenic 40.0%
ATCTCATTGTCAGTTCTTCC+TGG + chr8_1:4622952-4622971 None:intergenic 40.0%
!! GCTATTGGTTCATGAGTTTG+TGG + chr8_1:4623030-4623049 None:intergenic 40.0%
GGCGATAGACGAATTTGATT+TGG + chr8_1:4623076-4623095 None:intergenic 40.0%
!! GTTTTGTTGCTTGCCAAAGA+AGG + chr8_1:4623189-4623208 None:intergenic 40.0%
TACAACAAGCAATGTGATGG+AGG - chr8_1:4623383-4623402 Msa1173910:CDS 40.0%
CGTTCTCTTCCTAAGTTAGC+AGG - chr8_1:4621069-4621088 Msa1173910:CDS 45.0%
AACTCTTACCGCAACGAAGA+AGG + chr8_1:4622185-4622204 None:intergenic 45.0%
! GTAAGAGTTGCCGACTAAGA+TGG - chr8_1:4622196-4622215 Msa1173910:intron 45.0%
AAGGGACCGCGTTTAATATC+AGG + chr8_1:4622237-4622256 None:intergenic 45.0%
ATACAGCTTCATGCCATCCT+TGG - chr8_1:4622282-4622301 Msa1173910:intron 45.0%
TTCATGCCATCCTTGGAAAC+AGG - chr8_1:4622289-4622308 Msa1173910:intron 45.0%
!! GGGTCCGAAAGGTATTTCAA+TGG + chr8_1:4622619-4622638 None:intergenic 45.0%
CGAACATGGTTCATCTACTG+AGG + chr8_1:4622640-4622659 None:intergenic 45.0%
CATTGAACGCGTATCGAACA+TGG + chr8_1:4622654-4622673 None:intergenic 45.0%
CAAGACTTGAAGCAGAAGCA+AGG - chr8_1:4623124-4623143 Msa1173910:intron 45.0%
! GTTGGACAATCTTTTCGCAC+CGG - chr8_1:4623246-4623265 Msa1173910:intron 45.0%
!! TAAATAAAATTTATTAAAAC+AGG - chr8_1:4621212-4621231 Msa1173910:CDS 5.0%
TGGGGTTGAAGAAAGGTCCA+TGG - chr8_1:4620983-4621002 Msa1173910:CDS 50.0%
AAAATGGTGGTCACGGAAGC+TGG - chr8_1:4621046-4621065 Msa1173910:CDS 50.0%
CTTTCAGGCCTTCTTCGTTG+CGG - chr8_1:4622174-4622193 Msa1173910:CDS 50.0%
!! GTGCACTTTAGAGTGCTGAG+TGG - chr8_1:4622376-4622395 Msa1173910:intron 50.0%
TCATCTACTGAGGGTCCGAA+AGG + chr8_1:4622630-4622649 None:intergenic 50.0%
TCAATTGCCTCTCAGCTACC+AGG - chr8_1:4622931-4622950 Msa1173910:intron 50.0%
AGTTCTTCCTGGTAGCTGAG+AGG + chr8_1:4622941-4622960 None:intergenic 50.0%
CACTTTCCCATTGAGCCATG+TGG + chr8_1:4623104-4623123 None:intergenic 50.0%
CACTGCACTGCAACTCTTGT+TGG - chr8_1:4623488-4623507 Msa1173910:CDS 50.0%
! CTCGTCGTCTGATTTGCGAC+CGG + chr8_1:4623268-4623287 None:intergenic 55.0%
ACGCGGTCCCTTTACACCTG+AGG - chr8_1:4622245-4622264 Msa1173910:intron 60.0%
CACGCGCCACATGGCTCAAT+GGG - chr8_1:4623095-4623114 Msa1173910:intron 60.0%
CGGTCGCAAATCAGACGACG+AGG - chr8_1:4623266-4623285 Msa1173910:intron 60.0%
GTCTATCGCCACGCGCCACA+TGG - chr8_1:4623086-4623105 Msa1173910:intron 65.0%
CCATTGAGCCATGTGGCGCG+TGG + chr8_1:4623097-4623116 None:intergenic 65.0%
CCACGCGCCACATGGCTCAA+TGG - chr8_1:4623094-4623113 Msa1173910:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 4620844 4623548 4620844 ID=Msa1173910;Name=Msa1173910
chr8_1 mRNA 4620844 4623548 4620844 ID=Msa1173910-mRNA-1;Parent=Msa1173910;Name=Msa1173910-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|1|0.33|1|1|1|3|0|333
chr8_1 exon 4623302 4623548 4623302 ID=Msa1173910-mRNA-1:exon:1630;Parent=Msa1173910-mRNA-1
chr8_1 exon 4622082 4622211 4622082 ID=Msa1173910-mRNA-1:exon:1629;Parent=Msa1173910-mRNA-1
chr8_1 exon 4620844 4621468 4620844 ID=Msa1173910-mRNA-1:exon:1628;Parent=Msa1173910-mRNA-1
chr8_1 CDS 4623302 4623548 4623302 ID=Msa1173910-mRNA-1:cds;Parent=Msa1173910-mRNA-1
chr8_1 CDS 4622082 4622211 4622082 ID=Msa1173910-mRNA-1:cds;Parent=Msa1173910-mRNA-1
chr8_1 CDS 4620844 4621468 4620844 ID=Msa1173910-mRNA-1:cds;Parent=Msa1173910-mRNA-1
Gene Sequence

>Msa1173910

TCTTTCAAGTGCTACAAACAAATCAACATTAATAATGCACCAGTGTGCATGATTGTTCTAAAAGTGTTAAATATTAAAACCATTGCATTTTTTGAGAGAGAAGAGAAAATGGGAAGAACACCTTGTTGTGATAGCAAAATGGGGTTGAAGAAAGGTCCATGGACTACTGAAGAAGATGAAGTTCTTGTTAATTTTATCAAGAAAAATGGTGGTCACGGAAGCTGGCGTTCTCTTCCTAAGTTAGCAGGCCTTCTTCGTTGCGGTAAGAGTTGCCGACTAAGATGGACAAACTACTTGAGACCTGATATTAAACGCGGTCCCTTTACACCTGAGGAAGAAAAACTAGTCATACAGCTTCATGCCATCCTTGGAAACAGGTGGGCTTCAATTGCCTCTCAGCTACCAGGAAGAACTGACAATGAGATCAAGAATTTATGGAACACACACTTAAAGAAACGTCTCATATGCATGGGAATTGATCCACAAACTCATGAACCAATAGCCTCATCACATTACTTCCCAATTTCCAAATCAAATTCGTCTATCGCCACGCGCCACATGGCTCAATGGGAAAGTGCAAGACTTGAAGCAGAAGCAAGGCTCTCAAAAGACACATCTTTAATCAACAATAACAACATTCCTTCTTTGGCAAGCAACAAAACTGATTCTGACTATTTCCTTAAGATATGGAACTCTGAAGTTGGACAATCTTTTCGCACCGGTCGCAAATCAGACGACGAGGACGATGACGATAAAACTAAGTGCCAAAGTTCAATGTCTCAAGAAGGGTCATCTTGTAATAACAACAACAAATGTGGATCAGTTTCTGTTACTACTACAACAAGCAATGTGATGGAGGATTTTGAATGGAGAAACTACAAGTCATTTGATGTAGGTTATGATGATTCATCAAGCTCTAATGATCTTGAAGACTCATCTGACACTGCACTGCAACTCTTGTTGGATTTTCCTTCTAACAATGACATGAGCTTCTTAGAATGA
Protein sequence

>Msa1173910

SFKCYKQININNAPVCMIVLKVLNIKTIAFFEREEKMGRTPCCDSKMGLKKGPWTTEEDEVLVNFIKKNGGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHAILGNRWASIASQLPGRTDNEIKNLWNTHLKKRLICMGIDPQTHEPIASSHYFPISKSNSSIATRHMAQWESARLEAEARLSKDTSLINNNNIPSLASNKTDSDYFLKIWNSEVGQSFRTGRKSDDEDDDDKTKCQSSMSQEGSSCNNNNKCGSVSVTTTTSNVMEDFEWRNYKSFDVGYDDSSSSNDLEDSSDTALQLLLDFPSNNDMSFLE*