AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1175520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1175520 MtrunA17_Chr8g0345691 63.542 288 103 1 187 474 1 286 1.49e-121 361
Msa1175520 MtrunA17_Chr8g0345691 66.138 189 59 2 1 189 1 184 4.73e-76 244
Msa1175520 MtrunA17_Chr8g0345671 65.744 289 95 3 187 474 1 286 1.29e-120 358
Msa1175520 MtrunA17_Chr8g0345671 67.725 189 55 3 1 189 1 183 1.00e-75 243
Msa1175520 MtrunA17_Chr8g0345721 74.752 202 20 2 162 334 1 200 2.84e-99 296
Msa1175520 MtrunA17_Chr8g0345721 58.480 171 40 2 1 142 26 194 9.55e-58 190
Msa1175520 MtrunA17_Chr8g0345711 80.723 166 30 1 1 166 1 164 4.45e-93 279
Msa1175520 MtrunA17_Chr8g0345711 61.688 154 58 1 187 339 1 154 3.10e-61 197
Msa1175520 MtrunA17_Chr8g0345741 73.188 138 37 0 209 346 2 139 1.40e-68 216
Msa1175520 MtrunA17_Chr8g0345741 65.035 143 45 2 23 165 2 139 6.15e-58 188
Msa1175520 MtrunA17_Chr8g0345731 61.935 155 53 3 10 161 22 173 4.38e-60 194
Msa1175520 MtrunA17_Chr8g0345731 63.758 149 49 3 199 342 25 173 1.36e-59 193
Msa1175520 MtrunA17_Chr3g0128111 49.704 169 77 5 15 182 45 206 1.77e-45 159
Msa1175520 MtrunA17_Chr3g0128111 47.674 172 75 7 201 365 45 208 6.67e-41 146
Msa1175520 MtrunA17_Chr8g0345701 57.746 142 44 4 199 326 8 147 7.11e-45 155
Msa1175520 MtrunA17_Chr8g0345701 52.448 143 52 3 12 140 7 147 3.12e-41 145
Msa1175520 MtrunA17_Chr5g0428991 47.568 185 87 5 12 193 25 202 1.43e-44 165
Msa1175520 MtrunA17_Chr5g0428991 49.686 159 69 5 199 350 26 180 1.35e-40 154
Msa1175520 MtrunA17_Chr3g0128151 53.247 154 68 4 12 164 22 172 3.51e-43 160
Msa1175520 MtrunA17_Chr3g0128151 49.375 160 70 6 199 351 23 178 3.19e-39 149
Msa1175520 MtrunA17_Chr2g0318101 33.935 277 168 7 199 474 16 278 1.07e-38 144
Msa1175520 MtrunA17_Chr2g0318101 35.593 236 112 9 12 224 15 233 1.93e-30 121
Msa1175520 MtrunA17_Chr5g0400461 46.341 164 79 4 199 354 7 169 2.46e-38 142
Msa1175520 MtrunA17_Chr5g0400461 42.690 171 82 5 12 173 6 169 8.03e-36 135
Msa1175520 MtrunA17_Chr2g0309891 44.654 159 77 5 195 346 4 158 8.74e-38 141
Msa1175520 MtrunA17_Chr2g0309891 45.570 158 79 5 11 165 5 158 8.52e-37 138
Msa1175520 MtrunA17_Chr8g0364791 42.384 151 83 3 15 164 9 156 1.05e-37 143
Msa1175520 MtrunA17_Chr8g0364791 43.590 156 77 6 196 345 6 156 3.30e-36 139
Msa1175520 MtrunA17_Chr6g0481091 43.452 168 91 3 12 178 6 170 2.49e-37 137
Msa1175520 MtrunA17_Chr6g0481091 37.662 231 124 8 199 421 7 225 1.26e-36 135
Msa1175520 MtrunA17_Chr8g0384201 43.046 151 82 3 15 164 9 156 2.60e-37 142
Msa1175520 MtrunA17_Chr8g0384201 43.590 156 77 6 196 345 6 156 1.71e-34 135
Msa1175520 MtrunA17_Chr3g0130101 43.709 151 81 3 15 164 10 157 3.01e-37 140
Msa1175520 MtrunA17_Chr3g0130101 42.038 157 80 5 195 345 6 157 3.14e-33 129
Msa1175520 MtrunA17_Chr1g0197361 38.725 204 116 5 15 213 11 210 1.47e-36 142
Msa1175520 MtrunA17_Chr1g0197361 45.033 151 76 4 201 346 11 159 2.87e-34 135
Msa1175520 MtrunA17_Chr5g0433781 42.857 175 82 6 199 361 7 175 4.48e-36 141
Msa1175520 MtrunA17_Chr5g0433781 45.122 164 72 6 12 167 6 159 7.15e-36 140
Msa1175520 MtrunA17_Chr3g0109821 38.889 198 109 5 199 387 7 201 5.97e-35 138
Msa1175520 MtrunA17_Chr3g0109821 45.342 161 77 6 12 167 6 160 7.96e-34 135
Msa1175520 MtrunA17_Chr4g0054791 41.232 211 111 8 199 400 7 213 1.24e-34 132
Msa1175520 MtrunA17_Chr4g0054791 43.949 157 85 3 12 166 6 161 3.37e-34 130
Msa1175520 MtrunA17_Chr3g0092671 43.137 153 81 4 15 165 8 156 6.23e-34 134
Msa1175520 MtrunA17_Chr3g0092671 42.384 151 80 3 201 346 8 156 2.53e-31 126
Msa1175520 MtrunA17_Chr4g0047841 47.482 139 68 4 188 325 6 140 5.86e-33 127
Msa1175520 MtrunA17_Chr4g0047841 35.829 187 81 5 9 165 12 189 7.11e-28 114
Msa1175520 MtrunA17_Chr7g0263931 43.312 157 76 5 199 345 12 165 1.16e-32 126
Msa1175520 MtrunA17_Chr7g0263931 39.873 158 87 5 12 164 11 165 1.10e-29 118
Msa1175520 MtrunA17_Chr4g0042561 45.283 159 68 6 199 345 10 161 2.09e-32 124
Msa1175520 MtrunA17_Chr4g0042561 41.317 167 76 7 12 167 9 164 9.52e-30 117
Msa1175520 MtrunA17_Chr2g0326361 40.113 177 95 5 199 374 15 181 2.35e-32 125
Msa1175520 MtrunA17_Chr2g0326361 38.462 169 95 6 11 173 13 178 1.22e-28 115
Msa1175520 MtrunA17_Chr7g0252971 39.247 186 84 7 12 177 8 184 2.44e-32 126
Msa1175520 MtrunA17_Chr7g0252971 38.000 200 91 7 199 379 9 194 7.77e-32 124
Msa1175520 MtrunA17_Chr3g0130731 44.654 159 73 5 199 348 8 160 2.49e-32 125
Msa1175520 MtrunA17_Chr3g0130731 42.038 157 81 6 12 164 7 157 2.49e-27 111
Msa1175520 MtrunA17_Chr8g0384721 37.255 204 108 7 199 389 8 204 3.25e-32 124
Msa1175520 MtrunA17_Chr8g0384721 39.645 169 90 6 12 175 7 168 8.44e-28 112
Msa1175520 MtrunA17_Chr2g0318081 41.250 160 88 4 6 164 10 164 1.24e-31 124
Msa1175520 MtrunA17_Chr2g0318081 38.208 212 107 10 192 392 10 208 9.57e-30 119
Msa1175520 MtrunA17_Chr1g0147421 42.138 159 83 4 10 165 25 177 1.88e-31 124
Msa1175520 MtrunA17_Chr1g0147421 36.316 190 104 5 161 346 1 177 1.66e-29 118
Msa1175520 MtrunA17_Chr1g0183741 40.606 165 86 5 185 347 4 158 2.01e-31 122
Msa1175520 MtrunA17_Chr1g0183741 32.127 221 130 8 12 228 10 214 2.46e-28 113
Msa1175520 MtrunA17_Chr1g0197351 39.572 187 84 5 201 361 45 228 2.68e-31 125
Msa1175520 MtrunA17_Chr1g0197351 41.718 163 85 4 12 167 42 201 6.10e-31 124
Msa1175520 MtrunA17_Chr3g0124761 40.000 180 92 6 195 365 5 177 4.05e-31 121
Msa1175520 MtrunA17_Chr3g0124761 41.176 170 89 7 12 176 7 170 1.09e-28 114
Msa1175520 MtrunA17_Chr3g0091921 39.153 189 103 7 11 194 15 196 6.42e-31 121
Msa1175520 MtrunA17_Chr3g0091921 38.798 183 87 8 172 346 2 167 2.50e-29 117
Msa1175520 MtrunA17_Chr5g0398971 44.586 157 74 7 197 345 7 158 1.07e-30 121
Msa1175520 MtrunA17_Chr5g0398971 40.506 158 83 6 12 164 7 158 5.54e-28 114
Msa1175520 MtrunA17_Chr3g0139331 42.105 152 81 4 199 346 12 160 1.08e-30 121
Msa1175520 MtrunA17_Chr3g0139331 40.764 157 87 4 10 165 9 160 4.46e-30 120
Msa1175520 MtrunA17_Chr5g0417791 43.949 157 73 5 199 345 4 155 1.53e-30 119
Msa1175520 MtrunA17_Chr5g0417791 37.895 190 91 7 12 190 3 176 1.56e-29 116
Msa1175520 MtrunA17_Chr8g0361731 39.130 161 80 4 201 346 17 174 2.07e-30 122
Msa1175520 MtrunA17_Chr8g0361731 34.286 175 98 5 8 170 10 179 1.31e-27 114
Msa1175520 MtrunA17_Chr2g0311661 39.881 168 80 5 197 345 20 185 2.15e-30 119
Msa1175520 MtrunA17_Chr2g0311661 36.313 179 97 7 1 164 9 185 7.90e-25 103
Msa1175520 MtrunA17_Chr6g0453451 42.675 157 82 5 12 165 20 171 3.58e-30 119
Msa1175520 MtrunA17_Chr6g0453451 41.026 156 79 6 199 346 21 171 1.20e-27 112
Msa1175520 MtrunA17_Chr4g0026141 41.290 155 79 4 199 342 6 159 3.62e-30 118
Msa1175520 MtrunA17_Chr4g0026141 37.500 160 93 4 8 161 1 159 1.29e-28 114
Msa1175520 MtrunA17_Chr7g0261411 40.625 160 83 5 185 342 4 153 5.79e-30 118
Msa1175520 MtrunA17_Chr7g0261411 39.073 151 84 4 12 161 10 153 5.66e-26 107
Msa1175520 MtrunA17_Chr4g0017921 43.902 164 83 7 197 355 8 167 8.84e-30 119
Msa1175520 MtrunA17_Chr4g0017921 42.593 162 77 7 12 167 8 159 5.01e-29 117
Msa1175520 MtrunA17_Chr6g0461661 44.961 129 67 3 12 139 18 143 1.00e-29 119
Msa1175520 MtrunA17_Chr6g0461661 42.188 128 70 3 199 325 19 143 1.33e-27 113
Msa1175520 MtrunA17_Chr2g0316971 41.401 157 86 4 12 165 23 176 1.01e-29 119
Msa1175520 MtrunA17_Chr2g0316971 48.438 128 62 3 199 325 24 148 1.80e-29 119
Msa1175520 MtrunA17_Chr2g0309331 41.143 175 89 7 195 358 8 179 1.12e-29 119
Msa1175520 MtrunA17_Chr2g0309331 40.994 161 79 7 11 164 9 160 2.03e-26 109
Msa1175520 MtrunA17_Chr8g0359921 35.593 236 130 10 195 419 12 236 1.69e-29 118
Msa1175520 MtrunA17_Chr8g0359921 39.881 168 81 6 6 164 8 164 5.89e-29 116
Msa1175520 MtrunA17_Chr1g0201021 46.825 126 63 3 15 139 22 144 2.50e-29 120
Msa1175520 MtrunA17_Chr1g0201021 43.836 146 71 6 201 344 22 158 1.06e-28 119
Msa1175520 MtrunA17_Chr1g0200561 32.677 254 144 10 180 420 8 247 2.97e-29 117
Msa1175520 MtrunA17_Chr1g0200561 36.478 159 94 5 8 164 15 168 1.79e-25 107
Msa1175520 MtrunA17_Chr4g0056541 43.506 154 78 6 197 345 7 156 4.54e-29 117
Msa1175520 MtrunA17_Chr4g0056541 34.234 222 112 9 12 214 7 213 2.53e-28 115
Msa1175520 MtrunA17_Chr2g0311651 38.418 177 88 5 197 354 21 195 5.01e-29 116
Msa1175520 MtrunA17_Chr2g0311651 43.609 133 70 4 10 139 20 150 7.86e-25 104
Msa1175520 MtrunA17_Chr4g0018391 42.857 154 79 6 197 345 7 156 5.07e-29 117
Msa1175520 MtrunA17_Chr4g0018391 40.764 157 82 6 12 164 7 156 2.87e-28 115
Msa1175520 MtrunA17_Chr8g0385991 41.401 157 79 5 12 161 14 164 5.33e-29 114
Msa1175520 MtrunA17_Chr8g0385991 39.024 164 84 5 199 351 15 173 3.28e-28 111
Msa1175520 MtrunA17_Chr4g0076731 39.394 165 85 6 9 168 51 205 9.68e-29 117
Msa1175520 MtrunA17_Chr4g0076731 39.877 163 88 6 201 359 57 213 9.60e-28 115
Msa1175520 MtrunA17_Chr5g0417001 33.163 196 114 4 201 382 17 209 1.63e-28 116
Msa1175520 MtrunA17_Chr5g0417001 36.527 167 94 5 8 165 10 173 3.10e-26 110
Msa1175520 MtrunA17_Chr6g0453131 39.157 166 80 6 196 346 15 174 1.67e-28 116
Msa1175520 MtrunA17_Chr6g0453131 37.059 170 88 7 8 165 12 174 6.68e-27 112
Msa1175520 MtrunA17_Chr8g0372121 40.909 154 82 6 197 345 6 155 1.89e-28 114
Msa1175520 MtrunA17_Chr8g0372121 37.500 160 93 5 7 164 1 155 4.77e-27 110
Msa1175520 MtrunA17_Chr4g0060931 40.385 156 80 6 199 346 18 168 1.93e-28 115
Msa1175520 MtrunA17_Chr4g0060931 40.252 159 83 6 12 165 17 168 2.09e-28 115
Msa1175520 MtrunA17_Chr7g0214071 41.060 151 79 4 199 345 16 160 2.28e-28 113
Msa1175520 MtrunA17_Chr7g0214071 40.854 164 86 5 12 172 15 170 1.69e-27 110
Msa1175520 MtrunA17_Chr5g0405211 41.558 154 81 6 197 345 8 157 2.55e-28 115
Msa1175520 MtrunA17_Chr5g0405211 35.260 173 101 6 8 176 4 169 2.65e-27 112
Msa1175520 MtrunA17_Chr6g0484441 38.889 162 88 6 199 354 6 162 4.95e-28 114
Msa1175520 MtrunA17_Chr6g0484441 40.252 159 79 6 12 165 5 152 8.85e-28 113
Msa1175520 MtrunA17_Chr7g0253011 45.802 131 65 4 12 139 17 144 7.88e-28 114
Msa1175520 MtrunA17_Chr7g0253011 43.077 130 68 4 199 325 18 144 1.05e-25 108
Msa1175520 MtrunA17_Chr8g0346001 34.052 232 119 10 197 403 15 237 1.03e-27 114
Msa1175520 MtrunA17_Chr8g0346001 37.576 165 87 6 12 164 15 175 4.60e-25 107
Msa1175520 MtrunA17_Chr2g0312321 36.364 176 96 6 199 365 12 180 1.82e-27 111
Msa1175520 MtrunA17_Chr2g0312321 37.805 164 85 6 7 164 6 158 4.59e-26 107
Msa1175520 MtrunA17_Chr2g0321741 46.715 137 61 7 33 168 13 138 2.35e-27 112
Msa1175520 MtrunA17_Chr2g0321741 39.873 158 88 6 219 375 13 164 2.71e-25 106
Msa1175520 MtrunA17_Chr4g0038751 39.623 159 89 5 201 355 18 173 2.94e-27 110
Msa1175520 MtrunA17_Chr4g0038751 37.013 154 85 6 15 165 18 162 1.98e-24 103
Msa1175520 MtrunA17_Chr7g0217711 46.457 127 62 4 14 139 21 142 3.98e-27 107
Msa1175520 MtrunA17_Chr7g0217711 44.882 127 64 4 200 325 21 142 4.28e-26 104
Msa1175520 MtrunA17_Chr7g0217721 46.457 127 62 4 200 325 21 142 6.83e-27 111
Msa1175520 MtrunA17_Chr7g0217721 47.244 127 61 4 14 139 21 142 3.97e-26 108
Msa1175520 MtrunA17_Chr2g0321631 40.385 156 80 5 199 342 5 159 8.41e-27 108
Msa1175520 MtrunA17_Chr2g0321631 37.342 158 87 6 13 161 5 159 7.07e-25 103
Msa1175520 MtrunA17_Chr3g0144271 43.750 128 69 2 199 325 24 149 9.92e-27 112
Msa1175520 MtrunA17_Chr3g0144271 41.549 142 79 3 12 152 23 161 1.37e-26 111
Msa1175520 MtrunA17_Chr5g0442771 31.429 280 143 13 201 447 21 284 4.01e-26 108
Msa1175520 MtrunA17_Chr5g0442771 39.394 165 85 6 11 164 18 178 6.67e-24 101
Msa1175520 MtrunA17_Chr3g0131911 34.302 172 94 5 199 356 15 181 3.57e-24 100
Msa1175520 MtrunA17_Chr3g0131911 35.429 175 97 6 12 177 14 181 1.27e-21 93.6
Msa1175520 MtrunA17_Chr7g0266701 33.136 169 97 6 10 166 2 166 3.50e-23 98.6
Msa1175520 MtrunA17_Chr7g0266701 34.969 163 91 5 199 347 5 166 2.29e-22 96.3
Msa1175520 MtrunA17_Chr8g0384351 33.537 164 88 7 199 361 11 154 1.40e-19 86.3
Msa1175520 MtrunA17_Chr4g0050701 30.682 176 93 7 199 359 12 173 1.72e-19 86.3
Msa1175520 MtrunA17_Chr4g0050701 25.000 176 110 7 12 178 11 173 4.62e-14 70.9
Msa1175520 MtrunA17_Chr3g0130321 30.159 189 104 6 199 369 8 186 2.34e-16 77.8
Msa1175520 MtrunA17_Chr3g0130321 31.481 162 89 6 12 161 7 158 9.66e-13 67.4
Msa1175520 MtrunA17_Chr3g0113001 32.558 172 100 7 68 229 18 183 1.77e-15 77.0
Msa1175520 MtrunA17_Chr3g0113001 43.590 78 41 2 249 325 13 88 1.34e-13 71.2
Msa1175520 MtrunA17_Chr7g0243371 39.286 84 49 2 244 325 6 89 7.85e-14 68.2
Msa1175520 MtrunA17_Chr7g0243371 45.205 73 39 1 68 139 17 89 1.20e-13 67.4
Msa1175520 MtrunA17_Chr7g0251651 28.994 169 112 6 12 179 18 179 2.17e-12 65.9
Msa1175520 MtrunA17_Chr7g0251651 29.341 167 107 6 199 360 19 179 3.00e-12 65.5
Msa1175520 MtrunA17_Chr7g0274971 33.987 153 83 7 204 344 11 157 4.25e-12 65.5
Msa1175520 MtrunA17_Chr3g0113011 59.184 49 19 1 12 60 19 66 4.84e-11 58.5
Msa1175520 MtrunA17_Chr3g0113011 60.417 48 18 1 199 246 20 66 6.36e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1175520 AT3G49530.2 46.032 189 95 5 7 190 8 194 5.33e-47 168
Msa1175520 AT3G49530.2 52.469 162 67 5 199 353 14 172 1.24e-43 159
Msa1175520 AT3G49530.1 46.032 189 95 5 7 190 8 194 1.75e-46 168
Msa1175520 AT3G49530.1 52.469 162 67 5 199 353 14 172 4.08e-43 159
Msa1175520 AT4G35580.1 51.282 156 72 3 12 166 9 161 2.04e-43 160
Msa1175520 AT4G35580.1 50.000 158 70 4 199 350 10 164 7.10e-42 156
Msa1175520 AT4G35580.3 51.282 156 72 3 12 166 9 161 2.26e-43 160
Msa1175520 AT4G35580.3 50.000 158 70 4 199 350 10 164 7.56e-42 156
Msa1175520 AT4G35580.2 51.282 156 72 3 12 166 9 161 2.30e-43 160
Msa1175520 AT4G35580.2 50.000 158 70 4 199 350 10 164 7.66e-42 156
Msa1175520 AT5G24590.2 46.286 175 90 4 12 184 13 185 3.05e-43 159
Msa1175520 AT5G24590.2 49.677 155 70 4 199 347 14 166 4.02e-41 153
Msa1175520 AT1G33060.1 46.739 184 89 5 1 182 12 188 6.47e-43 161
Msa1175520 AT1G33060.1 53.595 153 62 5 199 345 25 174 1.81e-41 157
Msa1175520 AT1G33060.2 46.739 184 89 5 1 182 12 188 6.72e-43 161
Msa1175520 AT1G33060.2 53.595 153 62 5 199 345 25 174 2.13e-41 157
Msa1175520 AT4G01550.1 36.237 287 145 9 200 467 6 273 1.69e-42 157
Msa1175520 AT4G01550.1 41.969 193 102 5 14 204 6 190 1.71e-38 145
Msa1175520 AT4G17980.1 47.771 157 73 3 199 347 7 162 2.44e-40 146
Msa1175520 AT4G17980.1 44.025 159 85 3 11 166 5 162 6.10e-37 137
Msa1175520 AT4G17980.2 47.771 157 73 3 199 347 7 162 4.37e-40 146
Msa1175520 AT4G17980.2 44.025 159 85 3 11 166 5 162 1.50e-36 136
Msa1175520 AT4G01520.1 46.053 152 79 3 199 347 5 156 1.65e-39 145
Msa1175520 AT4G01520.1 37.281 228 110 8 13 212 5 227 1.28e-36 137
Msa1175520 AT4G01540.4 35.060 251 150 5 200 438 6 255 2.02e-39 147
Msa1175520 AT4G01540.4 37.885 227 108 8 14 212 6 227 9.64e-36 137
Msa1175520 AT4G01540.2 35.060 251 150 5 200 438 6 255 2.86e-39 147
Msa1175520 AT4G01540.2 37.885 227 108 8 14 212 6 227 1.35e-35 137
Msa1175520 AT4G01540.3 35.060 251 150 5 200 438 6 255 5.90e-39 146
Msa1175520 AT4G01540.3 37.885 227 108 8 14 212 6 227 1.38e-35 137
Msa1175520 AT5G17260.1 47.619 168 69 6 12 170 6 163 8.21e-39 147
Msa1175520 AT5G17260.1 46.875 160 73 5 193 345 3 157 5.63e-37 142
Msa1175520 AT4G01540.1 35.060 251 150 5 200 438 6 255 8.25e-39 147
Msa1175520 AT4G01540.1 37.885 227 108 8 14 212 6 227 1.97e-35 137
Msa1175520 AT3G03200.1 48.148 162 77 5 12 170 6 163 2.33e-38 145
Msa1175520 AT3G03200.1 46.875 160 73 5 193 345 3 157 2.05e-36 140
Msa1175520 AT3G17730.1 43.023 172 90 4 12 178 6 174 2.18e-37 137
Msa1175520 AT3G17730.1 41.573 178 85 6 199 370 7 171 1.12e-36 135
Msa1175520 AT3G10490.1 45.455 154 70 5 201 345 30 178 6.26e-37 136
Msa1175520 AT3G10490.1 44.304 158 83 4 12 167 27 181 1.87e-35 132
Msa1175520 AT3G44290.2 42.353 170 78 7 1 169 11 161 1.94e-36 134
Msa1175520 AT3G44290.2 43.636 165 79 7 189 347 2 158 1.68e-31 121
Msa1175520 AT3G10480.1 45.395 152 73 4 201 345 30 178 3.43e-36 139
Msa1175520 AT3G10480.1 44.025 159 82 5 12 167 27 181 3.25e-35 136
Msa1175520 AT5G64060.1 46.753 154 78 3 12 164 6 156 4.63e-36 137
Msa1175520 AT5G64060.1 44.371 151 75 5 201 345 9 156 4.28e-32 126
Msa1175520 AT3G44290.1 42.353 170 78 7 1 169 11 161 1.46e-35 135
Msa1175520 AT3G44290.1 42.515 167 79 7 182 347 8 158 2.37e-30 120
Msa1175520 AT3G10480.2 45.033 151 74 4 201 345 30 177 1.63e-35 137
Msa1175520 AT3G10480.2 43.312 157 85 3 12 167 27 180 1.28e-34 135
Msa1175520 AT3G10490.2 45.455 154 70 5 201 345 30 178 1.79e-35 137
Msa1175520 AT3G10490.2 44.304 158 83 4 12 167 27 181 2.45e-34 134
Msa1175520 AT2G27300.1 43.229 192 87 8 177 362 1 176 1.84e-35 135
Msa1175520 AT2G27300.1 40.462 173 84 7 15 181 17 176 4.35e-35 134
Msa1175520 AT5G09330.5 48.701 154 75 3 12 164 6 156 2.86e-35 137
Msa1175520 AT5G09330.5 46.452 155 66 6 201 345 9 156 3.77e-33 131
Msa1175520 AT5G09330.2 48.701 154 75 3 12 164 6 156 2.86e-35 137
Msa1175520 AT5G09330.2 46.452 155 66 6 201 345 9 156 3.77e-33 131
Msa1175520 AT5G09330.4 48.701 154 75 3 12 164 6 156 2.86e-35 137
Msa1175520 AT5G09330.4 46.452 155 66 6 201 345 9 156 3.77e-33 131
Msa1175520 AT5G09330.3 48.701 154 75 3 12 164 6 156 2.86e-35 137
Msa1175520 AT5G09330.3 46.452 155 66 6 201 345 9 156 3.77e-33 131
Msa1175520 AT5G09330.1 48.701 154 75 3 12 164 6 156 2.86e-35 137
Msa1175520 AT5G09330.1 46.452 155 66 6 201 345 9 156 3.77e-33 131
Msa1175520 AT1G65910.1 41.530 183 99 5 12 190 6 184 4.32e-35 138
Msa1175520 AT1G65910.1 42.391 184 93 7 199 372 7 187 1.45e-34 137
Msa1175520 AT3G10500.1 46.795 156 77 5 12 165 9 160 3.26e-34 135
Msa1175520 AT3G10500.1 44.737 152 75 5 201 346 12 160 2.45e-32 130
Msa1175520 AT5G46590.1 45.570 158 77 4 199 349 7 162 4.40e-34 130
Msa1175520 AT5G46590.1 41.818 165 82 5 11 168 5 162 9.12e-34 129
Msa1175520 AT1G69490.1 42.690 171 81 7 199 357 10 175 9.78e-34 128
Msa1175520 AT1G69490.1 39.227 181 94 8 11 180 8 183 8.58e-31 120
Msa1175520 AT5G08790.1 34.397 282 157 10 199 461 8 280 1.14e-33 128
Msa1175520 AT5G08790.1 40.252 159 83 5 12 164 7 159 4.99e-30 118
Msa1175520 AT5G22290.1 43.312 157 77 7 11 166 21 166 1.26e-33 130
Msa1175520 AT5G22290.1 41.916 167 85 7 184 347 9 166 6.39e-31 122
Msa1175520 AT3G04070.2 41.436 181 87 5 199 363 11 188 2.07e-33 129
Msa1175520 AT3G04070.2 41.818 165 82 5 12 165 10 171 2.10e-30 121
Msa1175520 AT5G04410.1 44.099 161 74 5 12 165 9 160 2.15e-33 133
Msa1175520 AT5G04410.1 44.079 152 76 4 201 346 12 160 1.08e-32 131
Msa1175520 AT1G32510.1 38.424 203 109 6 199 387 7 207 3.13e-33 127
Msa1175520 AT1G32510.1 40.116 172 85 5 7 166 1 166 3.62e-32 124
Msa1175520 AT1G01720.1 43.478 161 75 5 195 345 4 158 4.26e-33 127
Msa1175520 AT1G01720.1 41.772 158 81 7 12 164 7 158 1.33e-27 112
Msa1175520 AT2G24430.2 44.375 160 80 5 10 166 14 167 4.28e-33 128
Msa1175520 AT2G24430.2 42.857 154 80 4 199 347 17 167 6.47e-31 122
Msa1175520 AT2G24430.1 44.375 160 80 5 10 166 14 167 4.28e-33 128
Msa1175520 AT2G24430.1 42.857 154 80 4 199 347 17 167 6.47e-31 122
Msa1175520 AT1G02230.1 43.478 161 79 6 13 171 4 154 9.44e-33 128
Msa1175520 AT1G02230.1 42.949 156 84 4 196 348 1 154 2.95e-32 126
Msa1175520 AT5G39820.1 44.526 137 72 3 201 336 23 156 3.14e-32 126
Msa1175520 AT5G39820.1 44.275 131 69 3 10 139 18 145 1.93e-28 115
Msa1175520 AT3G04070.1 39.086 197 85 6 199 363 11 204 4.39e-32 126
Msa1175520 AT3G04070.1 39.227 181 80 7 12 165 10 187 1.99e-28 115
Msa1175520 AT5G46590.2 45.033 151 80 3 199 348 7 155 2.04e-31 122
Msa1175520 AT5G46590.2 43.846 130 70 3 12 140 6 133 7.20e-30 118
Msa1175520 AT3G15500.1 37.931 174 102 4 6 178 8 176 2.07e-31 123
Msa1175520 AT3G15500.1 42.500 160 81 5 192 345 8 162 3.23e-30 120
Msa1175520 AT1G02250.1 42.949 156 81 4 13 166 4 153 2.47e-31 124
Msa1175520 AT1G02250.1 43.671 158 82 5 196 349 1 155 8.03e-31 122
Msa1175520 AT3G15510.1 40.994 161 75 5 202 345 21 178 2.99e-31 124
Msa1175520 AT3G15510.1 36.158 177 86 5 16 174 21 188 1.17e-25 108
Msa1175520 AT5G61430.1 43.396 159 78 7 12 165 16 167 5.47e-31 122
Msa1175520 AT5G61430.1 42.308 156 77 6 199 346 17 167 1.98e-30 121
Msa1175520 AT1G26870.1 46.970 132 64 4 195 325 15 141 1.10e-30 123
Msa1175520 AT1G26870.1 38.690 168 90 5 8 165 12 176 2.83e-29 119
Msa1175520 AT3G29035.1 49.219 128 59 4 199 325 25 147 1.30e-30 121
Msa1175520 AT3G29035.1 46.575 146 68 6 12 155 24 161 7.83e-30 119
Msa1175520 AT1G52890.1 40.625 160 89 4 6 164 8 162 1.34e-30 121
Msa1175520 AT1G52890.1 41.667 168 84 6 192 350 8 170 1.09e-29 118
Msa1175520 AT4G27410.2 36.967 211 108 8 192 391 8 204 1.38e-30 120
Msa1175520 AT4G27410.2 39.375 160 91 4 6 164 8 162 4.92e-30 119
Msa1175520 AT3G15170.1 39.157 166 95 4 11 173 19 181 1.72e-30 120
Msa1175520 AT3G15170.1 41.509 159 81 6 196 346 19 173 7.49e-29 116
Msa1175520 AT1G54330.1 43.871 155 78 5 12 164 6 153 2.97e-30 119
Msa1175520 AT1G54330.1 43.333 150 79 4 199 345 7 153 5.40e-30 119
Msa1175520 AT5G39610.1 41.935 155 77 5 199 345 21 170 3.42e-30 119
Msa1175520 AT5G39610.1 42.857 161 80 6 9 164 17 170 3.49e-30 119
Msa1175520 AT5G63790.1 40.571 175 85 6 184 345 34 202 4.06e-30 119
Msa1175520 AT5G63790.1 37.097 186 99 8 12 190 50 224 8.16e-27 110
Msa1175520 AT3G10480.3 37.838 185 72 6 201 345 30 211 4.21e-30 123
Msa1175520 AT3G10480.3 36.458 192 82 6 12 167 27 214 1.39e-28 119
Msa1175520 AT5G63790.2 38.208 212 98 8 184 371 44 246 4.48e-30 119
Msa1175520 AT5G63790.2 37.097 186 99 8 12 190 60 234 9.12e-27 110
Msa1175520 AT1G33280.1 44.444 153 77 6 197 345 8 156 1.36e-29 118
Msa1175520 AT1G33280.1 41.509 159 83 6 12 167 8 159 3.42e-28 114
Msa1175520 AT5G53950.1 47.656 128 63 3 199 325 18 142 1.38e-29 119
Msa1175520 AT5G53950.1 40.881 159 88 4 12 167 17 172 7.32e-29 117
Msa1175520 AT2G02450.2 40.659 182 99 6 168 345 22 198 1.40e-29 120
Msa1175520 AT2G02450.2 38.037 163 85 7 11 168 51 202 1.68e-26 111
Msa1175520 AT5G07680.2 43.396 159 78 7 12 165 3 154 1.44e-29 118
Msa1175520 AT5G07680.2 42.308 156 77 6 199 346 4 154 2.32e-29 117
Msa1175520 AT3G12910.1 39.157 166 78 5 201 346 24 186 1.57e-29 117
Msa1175520 AT3G12910.1 38.554 166 84 6 15 165 24 186 1.69e-25 106
Msa1175520 AT2G02450.1 40.659 182 99 6 168 345 22 198 1.64e-29 119
Msa1175520 AT2G02450.1 38.037 163 85 7 11 168 51 202 1.24e-26 111
Msa1175520 AT5G07680.1 43.396 159 78 7 12 165 17 168 1.74e-29 118
Msa1175520 AT5G07680.1 42.308 156 77 6 199 346 18 168 2.53e-29 117
Msa1175520 AT1G61110.1 41.818 165 74 6 199 345 17 177 1.89e-29 118
Msa1175520 AT1G61110.1 37.714 175 80 7 9 164 13 177 2.65e-25 106
Msa1175520 AT1G77450.1 41.667 156 76 5 199 345 11 160 3.25e-29 115
Msa1175520 AT1G77450.1 38.922 167 92 6 12 174 10 170 1.76e-26 108
Msa1175520 AT1G79580.3 43.871 155 80 6 195 345 15 166 5.12e-29 117
Msa1175520 AT1G79580.3 40.881 159 79 7 12 164 17 166 1.93e-24 104
Msa1175520 AT1G79580.5 43.871 155 80 6 195 345 15 166 5.12e-29 117
Msa1175520 AT1G79580.5 40.881 159 79 7 12 164 17 166 1.93e-24 104
Msa1175520 AT1G79580.4 43.871 155 80 6 195 345 15 166 5.12e-29 117
Msa1175520 AT1G79580.4 40.881 159 79 7 12 164 17 166 1.93e-24 104
Msa1175520 AT1G79580.2 43.871 155 80 6 195 345 15 166 5.12e-29 117
Msa1175520 AT1G79580.2 40.881 159 79 7 12 164 17 166 1.93e-24 104
Msa1175520 AT1G79580.1 43.871 155 80 6 195 345 15 166 5.12e-29 117
Msa1175520 AT1G79580.1 40.881 159 79 7 12 164 17 166 1.93e-24 104
Msa1175520 AT1G34190.1 41.935 155 75 5 201 346 19 167 5.42e-29 120
Msa1175520 AT1G34190.1 40.789 152 86 3 15 165 19 167 3.04e-26 112
Msa1175520 AT2G43000.1 31.939 263 131 11 197 444 17 246 7.85e-29 115
Msa1175520 AT2G43000.1 36.932 176 101 6 15 188 21 188 5.82e-27 110
Msa1175520 AT3G18400.1 39.623 159 89 5 8 165 1 153 8.59e-29 116
Msa1175520 AT3G18400.1 39.216 153 83 6 199 346 6 153 4.83e-27 111
Msa1175520 AT4G10350.1 43.590 156 77 6 197 345 9 160 8.88e-29 116
Msa1175520 AT4G10350.1 40.881 159 87 5 12 167 9 163 1.57e-27 113
Msa1175520 AT3G04060.1 41.139 158 82 6 12 164 20 171 9.76e-29 116
Msa1175520 AT3G04060.1 40.000 155 81 6 199 345 21 171 1.25e-27 113
Msa1175520 AT1G12260.2 40.909 154 82 6 197 345 7 156 9.77e-29 116
Msa1175520 AT1G12260.2 40.764 157 82 6 12 164 7 156 2.28e-28 115
Msa1175520 AT4G36160.1 41.558 154 81 6 197 345 10 159 1.54e-28 116
Msa1175520 AT4G36160.1 37.349 166 93 6 12 173 10 168 6.42e-28 115
Msa1175520 AT4G36160.3 41.558 154 81 6 197 345 10 159 1.54e-28 116
Msa1175520 AT4G36160.3 37.349 166 93 6 12 173 10 168 6.42e-28 115
Msa1175520 AT3G04420.2 40.397 151 86 3 199 347 4 152 1.96e-28 114
Msa1175520 AT3G04420.2 36.898 187 104 6 13 196 4 179 2.32e-28 114
Msa1175520 AT4G36160.2 41.558 154 81 6 197 345 14 163 1.97e-28 116
Msa1175520 AT4G36160.2 37.349 166 93 6 12 173 14 172 7.37e-28 114
Msa1175520 AT2G17040.1 36.408 206 111 8 201 400 9 200 2.09e-28 114
Msa1175520 AT2G17040.1 38.994 159 85 6 10 165 4 153 3.73e-27 110
Msa1175520 AT4G27410.3 34.956 226 109 9 192 391 8 221 2.38e-28 114
Msa1175520 AT4G27410.3 36.000 175 93 4 6 164 8 179 2.95e-27 111
Msa1175520 AT1G12260.1 40.909 154 82 6 197 345 7 156 2.45e-28 116
Msa1175520 AT1G12260.1 40.764 157 82 6 12 164 7 156 5.07e-28 115
Msa1175520 AT5G04395.1 41.549 142 69 4 12 140 28 168 2.48e-28 111
Msa1175520 AT5G04395.1 42.857 147 70 4 199 332 29 174 2.50e-28 111
Msa1175520 AT1G62700.1 42.208 154 80 6 197 345 7 156 2.56e-28 116
Msa1175520 AT1G62700.1 40.764 157 82 6 12 164 7 156 1.19e-26 111
Msa1175520 AT1G62700.2 42.208 154 80 6 197 345 7 156 2.56e-28 116
Msa1175520 AT1G62700.2 40.764 157 82 6 12 164 7 156 1.19e-26 111
Msa1175520 AT5G66300.1 40.645 155 82 6 197 345 12 162 2.72e-28 114
Msa1175520 AT5G66300.1 38.710 155 89 5 12 164 12 162 7.14e-27 110
Msa1175520 AT1G76420.1 39.869 153 84 4 199 346 23 172 3.37e-28 114
Msa1175520 AT1G76420.1 37.500 160 85 5 12 165 22 172 1.76e-27 112
Msa1175520 AT1G71930.2 38.415 164 86 6 187 345 5 158 3.61e-28 114
Msa1175520 AT1G71930.2 35.366 164 91 6 7 164 4 158 4.06e-26 108
Msa1175520 AT1G71930.1 38.415 164 86 6 187 345 5 158 3.61e-28 114
Msa1175520 AT1G71930.1 35.366 164 91 6 7 164 4 158 4.06e-26 108
Msa1175520 AT5G18270.2 40.506 158 83 6 12 164 21 172 3.79e-28 114
Msa1175520 AT5G18270.2 45.312 128 65 4 199 325 22 145 3.10e-27 112
Msa1175520 AT3G04420.1 36.898 187 104 6 13 196 4 179 3.84e-28 114
Msa1175520 AT3G04420.1 40.397 151 86 3 199 347 4 152 4.12e-28 114
Msa1175520 AT2G18060.3 40.909 154 82 6 197 345 9 158 4.06e-28 115
Msa1175520 AT2G18060.3 36.810 163 92 6 6 164 3 158 2.21e-26 110
Msa1175520 AT2G18060.1 40.909 154 82 6 197 345 9 158 4.06e-28 115
Msa1175520 AT2G18060.1 36.810 163 92 6 6 164 3 158 2.21e-26 110
Msa1175520 AT5G18270.1 40.506 158 83 6 12 164 21 172 7.40e-28 114
Msa1175520 AT5G18270.1 44.531 128 66 4 199 325 22 145 1.21e-26 110
Msa1175520 AT2G33480.1 42.138 159 75 8 194 345 12 160 1.53e-27 111
Msa1175520 AT2G33480.1 43.506 154 78 4 12 164 15 160 5.83e-27 109
Msa1175520 AT2G33480.2 42.138 159 73 8 194 345 12 158 1.65e-27 111
Msa1175520 AT2G33480.2 44.156 154 75 5 12 164 15 158 9.17e-27 109
Msa1175520 AT5G62380.2 39.610 154 84 6 197 345 7 156 2.12e-27 112
Msa1175520 AT5G62380.2 38.217 157 86 6 12 164 7 156 5.85e-26 108
Msa1175520 AT5G62380.1 39.610 154 84 6 197 345 7 156 2.12e-27 112
Msa1175520 AT5G62380.1 38.217 157 86 6 12 164 7 156 5.85e-26 108
Msa1175520 AT1G34180.3 40.000 155 78 5 201 346 19 167 2.20e-27 114
Msa1175520 AT1G34180.3 41.447 152 85 3 15 165 19 167 1.85e-26 112
Msa1175520 AT1G34180.1 44.444 126 66 3 201 325 19 141 5.54e-27 114
Msa1175520 AT1G34180.1 41.447 152 85 3 15 165 19 167 2.81e-26 112
Msa1175520 AT5G22380.1 39.610 154 81 5 200 342 7 159 5.90e-27 108
Msa1175520 AT5G22380.1 38.125 160 92 5 8 161 1 159 1.40e-26 107
Msa1175520 AT1G56010.2 35.593 177 100 5 199 365 20 192 1.65e-26 109
Msa1175520 AT1G56010.2 33.333 207 106 7 3 195 10 198 4.35e-26 108
Msa1175520 AT5G13180.1 36.943 157 87 5 194 345 11 160 1.79e-26 108
Msa1175520 AT5G13180.1 39.610 154 85 4 12 164 14 160 1.05e-24 103
Msa1175520 AT1G02220.1 41.096 146 81 3 199 343 4 145 3.36e-26 110
Msa1175520 AT1G02220.1 40.789 152 78 5 13 162 4 145 6.25e-24 103
Msa1175520 AT4G28530.1 37.576 165 84 5 199 346 11 173 4.79e-26 109
Msa1175520 AT4G28530.1 34.302 172 87 5 12 165 10 173 1.45e-23 102
Msa1175520 AT3G12977.1 34.409 186 115 5 4 187 10 190 1.90e-25 105
Msa1175520 AT3G12977.1 33.520 179 107 5 199 370 19 192 2.02e-23 100
Msa1175520 AT2G46770.1 33.186 226 124 9 184 386 3 224 3.10e-25 107
Msa1175520 AT2G46770.1 36.994 173 87 7 12 167 16 183 1.26e-24 105
Msa1175520 AT1G52880.1 40.625 160 76 5 202 345 21 177 6.61e-25 105
Msa1175520 AT1G52880.1 36.747 166 79 6 16 164 21 177 3.95e-19 88.6
Msa1175520 AT3G61910.1 36.628 172 89 6 12 167 11 178 7.18e-25 105
Msa1175520 AT3G61910.1 34.211 228 110 10 197 401 11 221 2.06e-24 103
Msa1175520 AT3G44350.2 37.342 158 94 4 12 165 5 161 2.24e-24 102
Msa1175520 AT3G44350.2 35.256 156 91 4 200 346 7 161 3.97e-24 101
Msa1175520 AT1G34180.4 40.580 138 66 4 201 325 19 153 3.26e-24 105
Msa1175520 AT1G34180.4 38.415 164 85 4 15 165 19 179 9.40e-24 103
Msa1175520 AT1G32770.1 38.788 165 91 7 197 359 16 172 4.79e-24 103
Msa1175520 AT1G32770.1 38.095 168 83 8 12 164 16 177 1.39e-21 96.3
Msa1175520 AT1G34180.2 40.580 138 66 4 201 325 19 153 5.89e-24 105
Msa1175520 AT1G34180.2 38.415 164 85 4 15 165 19 179 1.20e-23 104
Msa1175520 AT3G44350.1 40.299 134 76 3 12 142 5 137 8.38e-24 97.8
Msa1175520 AT3G44350.1 38.760 129 75 3 200 325 7 134 1.10e-23 97.4
Msa1175520 AT1G01010.1 39.103 156 85 4 200 347 5 158 3.98e-23 102
Msa1175520 AT1G01010.1 39.506 162 81 6 14 166 5 158 6.24e-23 101
Msa1175520 AT3G04430.1 41.791 134 64 4 204 326 6 136 4.96e-22 94.0
Msa1175520 AT3G04430.1 37.956 137 71 4 18 143 6 139 7.20e-21 90.9
Msa1175520 AT1G32870.1 39.610 154 80 6 201 346 13 161 1.15e-21 98.2
Msa1175520 AT1G32870.1 39.490 157 87 5 12 165 10 161 1.22e-21 98.2
Msa1175520 AT1G32870.2 39.610 154 80 6 201 346 13 161 1.15e-21 98.2
Msa1175520 AT1G32870.2 39.490 157 87 5 12 165 10 161 1.16e-21 98.2
Msa1175520 AT1G32870.3 39.610 154 80 6 201 346 49 197 1.40e-21 98.2
Msa1175520 AT1G32870.3 39.490 157 87 5 12 165 46 197 1.41e-21 98.2
Msa1175520 AT5G64530.1 39.231 130 59 7 199 325 4 116 2.93e-19 85.9
Msa1175520 AT5G64530.1 35.385 130 66 6 12 139 3 116 4.14e-17 79.7
Msa1175520 AT5G64530.2 39.231 130 59 7 199 325 4 116 2.97e-19 85.1
Msa1175520 AT5G64530.2 35.385 130 66 6 12 139 3 116 1.11e-17 80.5
Msa1175520 AT4G28530.2 39.815 108 48 3 199 291 11 116 5.17e-16 79.3
Msa1175520 AT4G28530.2 34.188 117 60 2 12 113 10 124 4.01e-14 73.6
Msa1175520 AT3G12977.2 33.858 127 80 3 63 187 13 137 4.06e-15 75.1
Msa1175520 AT3G12977.2 33.333 123 73 3 255 370 19 139 4.91e-13 68.9
Msa1175520 AT4G10350.2 40.000 105 55 3 247 345 11 113 4.11e-15 76.3
Msa1175520 AT4G10350.2 38.614 101 57 3 69 167 19 116 1.90e-13 71.2
Msa1175520 AT5G61430.2 39.815 108 56 5 63 165 1 104 4.39e-15 75.9
Msa1175520 AT5G61430.2 35.849 106 58 4 249 346 1 104 1.37e-13 71.2
Msa1175520 AT1G56010.1 33.884 121 68 4 255 365 7 125 1.47e-13 71.2
Msa1175520 AT1G56010.1 32.143 140 65 6 70 195 8 131 8.79e-13 68.9
Msa1175520 AT2G33480.3 40.404 99 49 5 254 345 8 103 3.48e-13 68.9
Msa1175520 AT2G33480.3 40.816 98 55 2 68 164 8 103 7.51e-13 68.2
Msa1175520 AT3G55210.1 29.268 164 96 7 11 161 10 166 4.73e-13 70.1
Msa1175520 AT3G55210.1 30.769 169 94 8 192 342 3 166 2.53e-12 67.8
Msa1175520 AT5G14000.2 29.630 135 85 4 199 330 16 143 1.64e-12 65.9
Msa1175520 AT5G14000.1 29.630 135 85 4 199 330 16 143 4.82e-12 65.5
Msa1175520 AT3G10490.4 41.463 82 35 4 273 345 1 78 2.43e-11 65.5
Msa1175520 AT3G10490.3 41.463 82 35 4 273 345 1 78 2.43e-11 65.5

Find 82 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAATCCCAATAACTTTAT+TGG 0.134192 8_1:-6886464 None:intergenic
GAGCAACAAAGTTTGGATTT+TGG 0.202094 8_1:+6885017 Msa1175520:CDS
ATGGGTACCAATAAAGTTAT+TGG 0.225335 8_1:+6886457 Msa1175520:CDS
ATTGACCCCATATTTATTTC+TGG 0.228118 8_1:-6887758 None:intergenic
GGACCGTAACATTAGGATTA+TGG 0.235484 8_1:+6886438 Msa1175520:CDS
CTTAAGAGAGCAACAAAGTT+TGG 0.245550 8_1:+6885010 Msa1175520:CDS
ACAAGTATGCAAAGAGTAAA+AGG 0.277265 8_1:+6886371 Msa1175520:CDS
TTTGCATACTTGTATTTAAT+AGG 0.285334 8_1:-6886361 None:intergenic
CACTTTGCCAGAAATAAATA+TGG 0.297684 8_1:+6887751 Msa1175520:CDS
TACCAAGCAACTTGTTTCTA+AGG 0.299622 8_1:-6886137 None:intergenic
ACTCAACAATCTTCAATCTA+TGG 0.305975 8_1:+6887824 Msa1175520:CDS
TACCATGAAAATCCTGTTCT+TGG 0.316641 8_1:+6886499 Msa1175520:CDS
AGAGGTACTGACGAAGTTAT+TGG 0.321119 8_1:+6885073 Msa1175520:CDS
CAAAGAGTAAAAGGATTAAT+AGG 0.325883 8_1:+6886380 Msa1175520:CDS
TGGGTACCAATAAAGTTATT+GGG 0.337012 8_1:+6886458 Msa1175520:CDS
ATTCTTCTTGTTCCTCCTGT+TGG 0.344603 8_1:+6886072 Msa1175520:CDS
ATTCATGATGTTCTTCCTGT+TGG 0.372337 8_1:+6884696 Msa1175520:CDS
ATCCTGGTGTTAAAACCAAC+TGG 0.372389 8_1:+6885131 Msa1175520:CDS
TTTGCATACTTGTATTCAAT+AGG 0.378777 8_1:-6884977 None:intergenic
TTCTTGGTGTTAAGACCAAT+TGG 0.405374 8_1:+6886515 Msa1175520:CDS
TACTACCTTGCTCCTCATCC+TGG 0.411756 8_1:+6885115 Msa1175520:CDS
CGACAGTTGCAAACGTGCTC+TGG 0.416130 8_1:-6887919 None:intergenic
CTGGAATGGACCGTAACATT+AGG 0.421180 8_1:+6886431 Msa1175520:CDS
AGGGAAAGTATTTGTCTGCT+TGG 0.424155 8_1:-6887796 None:intergenic
TGAAGATTGTTGAGTAGAGA+AGG 0.435476 8_1:-6887816 None:intergenic
TTATATTTCTTTCAGGTAAG+TGG 0.435813 8_1:+6887728 Msa1175520:intron
GACCGTAACATTAGGATTAT+GGG 0.440373 8_1:+6886439 Msa1175520:CDS
GAGGTACTGACGAAGTTATT+GGG 0.441704 8_1:+6885074 Msa1175520:CDS
GAGTTCGAGAATAATAGTTC+CGG 0.455159 8_1:-6887854 None:intergenic
TGTATTCAAGTATAAACCTT+GGG 0.462690 8_1:+6884821 Msa1175520:CDS
TACCTTAGAAACAAGTTGCT+TGG 0.466831 8_1:+6886135 Msa1175520:CDS
TTTACTAACTCTTGATCTGT+TGG 0.468729 8_1:-6884732 None:intergenic
GATCATTCGATTAAGAATAG+AGG 0.474483 8_1:+6885055 Msa1175520:CDS
ACTTTGCCAGAAATAAATAT+GGG 0.475878 8_1:+6887752 Msa1175520:CDS
TTGGTCTTAACACCAAGAAC+AGG 0.477777 8_1:-6886511 None:intergenic
CTGATTAGCTCTTCATCTGT+TGG 0.480022 8_1:-6886108 None:intergenic
AAATATGGGGTCAATGTTTG+AGG 0.481637 8_1:+6887766 Msa1175520:CDS
AACAGGAGGAACAAGAAGAA+TGG 0.482221 8_1:-6886070 None:intergenic
GGACAAAATCTGAATCCAAC+AGG 0.487685 8_1:-6886087 None:intergenic
GGACGGAATCTGAATCCAAC+AGG 0.489981 8_1:-6884711 None:intergenic
TATCTCAGAAACAAGTTACT+TGG 0.491522 8_1:+6884759 Msa1175520:CDS
ATACTCATGAATGATCCAAT+TGG 0.492502 8_1:-6886530 None:intergenic
TGCCACCTTTGATGATCGCC+AGG 0.502799 8_1:+6886558 Msa1175520:CDS
CAATTCGATGTTTGTTAATG+CGG 0.504732 8_1:+6887961 Msa1175520:CDS
GAAGATTGTTGAGTAGAGAA+GGG 0.509614 8_1:-6887815 None:intergenic
GATACAATGATGTGTGATGA+AGG 0.510656 8_1:+6886012 Msa1175520:CDS
TAAAATCTGATGACCAAGAA+TGG 0.512088 8_1:+6886326 Msa1175520:CDS
TACCCATAATCCTAATGTTA+CGG 0.512343 8_1:-6886441 None:intergenic
TATTTACCTGGTAATTCCCA+TGG 0.526381 8_1:-6886213 None:intergenic
AAGAAGAATGGGAGGAAATG+AGG 0.527793 8_1:-6886058 None:intergenic
ACAGGAGGAACAAGAAGAAT+GGG 0.530636 8_1:-6886069 None:intergenic
TTCAATCTATGGAAATGAGC+CGG 0.531803 8_1:+6887835 Msa1175520:CDS
GAGGCTGTCATTTGTCTGCT+AGG 0.534597 8_1:-6886039 None:intergenic
ATCATGAATGAGAGGAAATG+AGG 0.537863 8_1:-6884682 None:intergenic
CTAACTCTTGATCTGTTGGA+CGG 0.541447 8_1:-6884728 None:intergenic
AAGTATTTGTCTGCTTGGAA+AGG 0.542716 8_1:-6887791 None:intergenic
ACAAACCTGGCGATCATCAA+AGG 0.542879 8_1:-6886563 None:intergenic
TATTTACCTGGTAAATCCCA+AGG 0.549546 8_1:-6884837 None:intergenic
TATAAACCTTGGGATTTACC+AGG 0.558233 8_1:+6884831 Msa1175520:CDS
TCTCAGCTTTCTTAATCAAG+CGG 0.558377 8_1:-6887503 None:intergenic
ATGTATTCAAGTATAAACCT+TGG 0.563533 8_1:+6884820 Msa1175520:CDS
CACGTTTGCAACTGTCGAAG+AGG 0.568050 8_1:+6887925 Msa1175520:CDS
TATTCGCAAGTTCGAACCAT+GGG 0.571075 8_1:+6886197 Msa1175520:CDS
GGTATGATTGTATGTGATGA+AGG 0.581248 8_1:+6887546 Msa1175520:CDS
ATCTGACACTGACAACATCA+TGG 0.584053 8_1:-6885168 None:intergenic
GGAAGAACATCATGAATGAG+AGG 0.590042 8_1:-6884690 None:intergenic
TAACACCAGGATGAGGAGCA+AGG 0.599024 8_1:-6885120 None:intergenic
ATTTGATGATAATAATACAC+AGG 0.613007 8_1:+6885189 Msa1175520:CDS
AGTGATAAGATCCGATGACT+CGG 0.614494 8_1:+6884937 Msa1175520:CDS
AGCCGAGATAAAAGGCGAAG+AGG 0.620211 8_1:+6885984 Msa1175520:CDS
TAAGATCCGATGACTCGGAA+TGG 0.622462 8_1:+6884942 Msa1175520:CDS
GGAGGAACAAGAAGAATGGG+AGG 0.625065 8_1:-6886066 None:intergenic
ATACAATGATGTGTGATGAA+GGG 0.629056 8_1:+6886013 Msa1175520:CDS
TACAATGATGTGTGATGAAG+GGG 0.629065 8_1:+6886014 Msa1175520:CDS
TCCTGGTGTTAAAACCAACT+GGG 0.630000 8_1:+6885132 Msa1175520:CDS
TTCGAACCATGGGAATTACC+AGG 0.630326 8_1:+6886207 Msa1175520:CDS
GAAAATCAAGAAACAGCTGA+AGG 0.641133 8_1:+6887600 Msa1175520:CDS
ATATTCGCAAGTTCGAACCA+TGG 0.658646 8_1:+6886196 Msa1175520:CDS
AACCTGGCGATCATCAAAGG+TGG 0.674073 8_1:-6886560 None:intergenic
GTACTCACGAATAACCCAGT+TGG 0.674708 8_1:-6885146 None:intergenic
CTTTGCCAGAAATAAATATG+GGG 0.689687 8_1:+6887753 Msa1175520:CDS
CAAAATCTGAATCCAACAGG+AGG 0.690195 8_1:-6886084 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATAAGAAAATAATGAT+GGG - chr8_1:6884873-6884892 None:intergenic 10.0%
!! TTATTATAAGAAAATAATGA+TGG - chr8_1:6884874-6884893 None:intergenic 10.0%
!! ATTATAAGAAAATAATGATG+GGG - chr8_1:6884872-6884891 None:intergenic 15.0%
!!! TAGTTTTTTTTTCCTTTTTA+AGG + chr8_1:6885256-6885275 Msa1175520:intron 15.0%
!! AAAATATCAAATCCTTAAAA+AGG - chr8_1:6885271-6885290 None:intergenic 15.0%
!!! TGTTTTGAAATTTTGATTTT+TGG + chr8_1:6885334-6885353 Msa1175520:intron 15.0%
!! TAATATATTTCTTATCTGAT+AGG + chr8_1:6886704-6886723 Msa1175520:intron 15.0%
!!! ATTTGATGATAATAATACAC+AGG + chr8_1:6885189-6885208 Msa1175520:CDS 20.0%
!!! TTTGATATTTTCTATCCAAT+TGG + chr8_1:6885280-6885299 Msa1175520:intron 20.0%
!! ATATGATACCAAAAGAAAAA+GGG - chr8_1:6885361-6885380 None:intergenic 20.0%
!! AATATGATACCAAAAGAAAA+AGG - chr8_1:6885362-6885381 None:intergenic 20.0%
!!! CTTTTGGTATCATATTATAT+TGG + chr8_1:6885366-6885385 Msa1175520:intron 20.0%
!!! TCTTTTTCTTTTTTTGACAT+AGG + chr8_1:6885544-6885563 Msa1175520:intron 20.0%
!!! ATTTTAAAACTATCTCAGAA+AGG - chr8_1:6885850-6885869 None:intergenic 20.0%
!! TACTACTCTGATTAATAATA+AGG + chr8_1:6885875-6885894 Msa1175520:intron 20.0%
!!! GTTTGTTTTATATATTTACC+TGG - chr8_1:6886228-6886247 None:intergenic 20.0%
!!! TTTTGTGTCAAAATAATGAT+GGG - chr8_1:6886259-6886278 None:intergenic 20.0%
!!! TTTTTGTGTCAAAATAATGA+TGG - chr8_1:6886260-6886279 None:intergenic 20.0%
!! TTTGCATACTTGTATTTAAT+AGG - chr8_1:6886364-6886383 None:intergenic 20.0%
!! ATTAATAGGACAACAAAAAA+TGG + chr8_1:6886394-6886413 Msa1175520:CDS 20.0%
!! GAAATATATTAAATCCTGAA+AGG - chr8_1:6886695-6886714 None:intergenic 20.0%
!! ATATGACACTAAAAGAAAAA+GGG - chr8_1:6886785-6886804 None:intergenic 20.0%
!! AATATGACACTAAAAGAAAA+AGG - chr8_1:6886786-6886805 None:intergenic 20.0%
!!! ATTTATTTTTGATTTCTCTC+TGG - chr8_1:6886824-6886843 None:intergenic 20.0%
!! CAAAAATAAATCTCAGATAT+TGG + chr8_1:6886833-6886852 Msa1175520:intron 20.0%
!!! CATTTTATAATGTCTCATAT+TGG - chr8_1:6887442-6887461 None:intergenic 20.0%
!!! ACTTGTTTTATATTTCTTTC+AGG + chr8_1:6887721-6887740 Msa1175520:intron 20.0%
!!! ATTGTTGTCGTTTTTTAAAT+AGG - chr8_1:6887894-6887913 None:intergenic 20.0%
! ATGTATTCAAGTATAAACCT+TGG + chr8_1:6884820-6884839 Msa1175520:CDS 25.0%
! TGTATTCAAGTATAAACCTT+GGG + chr8_1:6884821-6884840 Msa1175520:CDS 25.0%
! TTTGCATACTTGTATTCAAT+AGG - chr8_1:6884980-6884999 None:intergenic 25.0%
!! AGATGAAGTTTTTGATGAAA+AGG + chr8_1:6885445-6885464 Msa1175520:intron 25.0%
!!! TGATAAAGAGTGATTTTGAT+TGG - chr8_1:6885486-6885505 None:intergenic 25.0%
! AATCAAAATCACTCTTTATC+AGG + chr8_1:6885485-6885504 Msa1175520:intron 25.0%
!! AATATTGATTATCAACTCTG+AGG + chr8_1:6885608-6885627 Msa1175520:intron 25.0%
! TTAAAAGAGACAATTGGAAA+AGG - chr8_1:6885904-6885923 None:intergenic 25.0%
! CAACATTTAAAAGAGACAAT+TGG - chr8_1:6885910-6885929 None:intergenic 25.0%
!! AAAAGTCCTCTACAAAATTT+TGG - chr8_1:6885941-6885960 None:intergenic 25.0%
! CAAAGAGTAAAAGGATTAAT+AGG + chr8_1:6886380-6886399 Msa1175520:CDS 25.0%
! CTTAATCCCAATAACTTTAT+TGG - chr8_1:6886467-6886486 None:intergenic 25.0%
!!! AGGTTTGTTTTGTTACATTA+CGG + chr8_1:6886578-6886597 Msa1175520:intron 25.0%
!!! TTCTGAAATTTGAAGATGTT+TGG + chr8_1:6886730-6886749 Msa1175520:intron 25.0%
! TATGACACTAAAAGAAAAAG+GGG - chr8_1:6886784-6886803 None:intergenic 25.0%
!!! CTCAAATTGGTTTTGTTTTA+TGG + chr8_1:6887068-6887087 Msa1175520:intron 25.0%
!!! CTCAAATTGGTTTTGTTTTA+TGG + chr8_1:6887068-6887087 Msa1175520:intron 25.0%
!!! AATTTCAGATTTTGAAGCAT+TGG + chr8_1:6887301-6887320 Msa1175520:intron 25.0%
! TAATTTGAAAATTCCTGTCA+AGG - chr8_1:6887649-6887668 None:intergenic 25.0%
! TTCAAATTAAAACGAAGTCT+TGG + chr8_1:6887660-6887679 Msa1175520:intron 25.0%
!! TTATATTTCTTTCAGGTAAG+TGG + chr8_1:6887728-6887747 Msa1175520:intron 25.0%
! ACTTTGCCAGAAATAAATAT+GGG + chr8_1:6887752-6887771 Msa1175520:CDS 25.0%
TTTACTAACTCTTGATCTGT+TGG - chr8_1:6884735-6884754 None:intergenic 30.0%
TATCTCAGAAACAAGTTACT+TGG + chr8_1:6884759-6884778 Msa1175520:CDS 30.0%
GATCATTCGATTAAGAATAG+AGG + chr8_1:6885055-6885074 Msa1175520:CDS 30.0%
CATATTTCAGAACAACCAAT+TGG - chr8_1:6885298-6885317 None:intergenic 30.0%
!! ATTGGTTGTTCTGAAATATG+AGG + chr8_1:6885298-6885317 Msa1175520:intron 30.0%
!! GTTCTGAAATATGAGGATAT+TGG + chr8_1:6885305-6885324 Msa1175520:intron 30.0%
! TTTTTGGACCCTTTTTCTTT+TGG + chr8_1:6885350-6885369 Msa1175520:intron 30.0%
!!! GACATAGGATTGATTTGTTT+TGG + chr8_1:6885559-6885578 Msa1175520:intron 30.0%
TTTCATGTACTCACACATTT+GGG - chr8_1:6885780-6885799 None:intergenic 30.0%
! TTTTCATGTACTCACACATT+TGG - chr8_1:6885781-6885800 None:intergenic 30.0%
! TATGCTCCAAAATTTTGTAG+AGG + chr8_1:6885932-6885951 Msa1175520:intron 30.0%
ATGAAAAAAGCCGAGATAAA+AGG + chr8_1:6885976-6885995 Msa1175520:CDS 30.0%
ATACAATGATGTGTGATGAA+GGG + chr8_1:6886013-6886032 Msa1175520:CDS 30.0%
TAAAATCTGATGACCAAGAA+TGG + chr8_1:6886326-6886345 Msa1175520:CDS 30.0%
ACAAGTATGCAAAGAGTAAA+AGG + chr8_1:6886371-6886390 Msa1175520:CDS 30.0%
! GGACAACAAAAAATGGTTTT+TGG + chr8_1:6886401-6886420 Msa1175520:CDS 30.0%
TACCCATAATCCTAATGTTA+CGG - chr8_1:6886444-6886463 None:intergenic 30.0%
ATGGGTACCAATAAAGTTAT+TGG + chr8_1:6886457-6886476 Msa1175520:CDS 30.0%
TGGGTACCAATAAAGTTATT+GGG + chr8_1:6886458-6886477 Msa1175520:CDS 30.0%
ATACTCATGAATGATCCAAT+TGG - chr8_1:6886533-6886552 None:intergenic 30.0%
GTAATGTAACAAAACAAACC+TGG - chr8_1:6886579-6886598 None:intergenic 30.0%
!!! TGTATGTGTTTTTTCCTTTC+AGG + chr8_1:6886678-6886697 Msa1175520:intron 30.0%
! TCTTTTAGTGTCATATTGTG+AGG + chr8_1:6886789-6886808 Msa1175520:intron 30.0%
! CTTTTAGTGTCATATTGTGA+GGG + chr8_1:6886790-6886809 Msa1175520:intron 30.0%
! TTTTAGTGTCATATTGTGAG+GGG + chr8_1:6886791-6886810 Msa1175520:intron 30.0%
ATATACAAGTGAATAGAGCT+AGG + chr8_1:6886897-6886916 Msa1175520:intron 30.0%
AGTTCAAAGTCAGTTATAAC+TGG - chr8_1:6886942-6886961 None:intergenic 30.0%
!! GACTTTGAACTAGCTTATTT+TGG + chr8_1:6886951-6886970 Msa1175520:intron 30.0%
GGATATTACTAGTAAACAAC+AGG - chr8_1:6887025-6887044 None:intergenic 30.0%
TCCTCTTATACATATTCTAC+TGG + chr8_1:6887042-6887061 Msa1175520:intron 30.0%
ACCAGTAGAATATGTATAAG+AGG - chr8_1:6887046-6887065 None:intergenic 30.0%
!! ATTCTACTGGTTTCTCAAAT+TGG + chr8_1:6887055-6887074 Msa1175520:intron 30.0%
AGAGGATATTACTAGTAAAC+TGG - chr8_1:6887028-6887047 None:intergenic 30.0%
TCCTCTTATACATATTCTAC+TGG + chr8_1:6887042-6887061 Msa1175520:intron 30.0%
ACCAGTAGAATATGTATAAG+AGG - chr8_1:6887046-6887065 None:intergenic 30.0%
!! ATTCTACTGGTTTCTCAAAT+TGG + chr8_1:6887055-6887074 Msa1175520:intron 30.0%
AAACTAAAAAAGAGTGGCTT+TGG - chr8_1:6887260-6887279 None:intergenic 30.0%
CAGCAAAAACTAAAAAAGAG+TGG - chr8_1:6887266-6887285 None:intergenic 30.0%
AATTCTTATCATGCATCTCA+TGG - chr8_1:6887387-6887406 None:intergenic 30.0%
AGAATTTCACTTTGTAACCT+CGG + chr8_1:6887401-6887420 Msa1175520:intron 30.0%
! TTATCCTCCAAATTTTGTAG+AGG + chr8_1:6887466-6887485 Msa1175520:intron 30.0%
CAAAAGTCCTCTACAAAATT+TGG - chr8_1:6885942-6885961 None:intergenic 30.0%
AGCTGAGAAAAAAATTGAAG+AGG + chr8_1:6887518-6887537 Msa1175520:CDS 30.0%
AAAAAAATTGAAGAGGAAGC+TGG + chr8_1:6887525-6887544 Msa1175520:CDS 30.0%
CACTTTGCCAGAAATAAATA+TGG + chr8_1:6887751-6887770 Msa1175520:CDS 30.0%
CTTTGCCAGAAATAAATATG+GGG + chr8_1:6887753-6887772 Msa1175520:CDS 30.0%
ATTGACCCCATATTTATTTC+TGG - chr8_1:6887761-6887780 None:intergenic 30.0%
ACTCAACAATCTTCAATCTA+TGG + chr8_1:6887824-6887843 Msa1175520:CDS 30.0%
! CAATTCGATGTTTGTTAATG+CGG + chr8_1:6887961-6887980 Msa1175520:CDS 30.0%
ATCATGAATGAGAGGAAATG+AGG - chr8_1:6884685-6884704 None:intergenic 35.0%
ATTCATGATGTTCTTCCTGT+TGG + chr8_1:6884696-6884715 Msa1175520:CDS 35.0%
TATAAACCTTGGGATTTACC+AGG + chr8_1:6884831-6884850 Msa1175520:CDS 35.0%
TATTTACCTGGTAAATCCCA+AGG - chr8_1:6884840-6884859 None:intergenic 35.0%
! GGGTTTGTTTGATATTTACC+TGG - chr8_1:6884852-6884871 None:intergenic 35.0%
ACTGAATGAGCTGAAAAAGA+AGG - chr8_1:6884920-6884939 None:intergenic 35.0%
CTTAAGAGAGCAACAAAGTT+TGG + chr8_1:6885010-6885029 Msa1175520:CDS 35.0%
! GAGCAACAAAGTTTGGATTT+TGG + chr8_1:6885017-6885036 Msa1175520:CDS 35.0%
!! TTTGGATTTTGGAAAGCTAC+TGG + chr8_1:6885028-6885047 Msa1175520:CDS 35.0%
!! TGTCACTTTCTGCTATACTA+AGG + chr8_1:6885411-6885430 Msa1175520:intron 35.0%
! ATTGAATTCCCTGCATTGAT+TGG + chr8_1:6885644-6885663 Msa1175520:intron 35.0%
!! TTGAATTCCCTGCATTGATT+GGG + chr8_1:6885645-6885664 Msa1175520:intron 35.0%
GATACAATGATGTGTGATGA+AGG + chr8_1:6886012-6886031 Msa1175520:CDS 35.0%
TACAATGATGTGTGATGAAG+GGG + chr8_1:6886014-6886033 Msa1175520:CDS 35.0%
TACCTTAGAAACAAGTTGCT+TGG + chr8_1:6886135-6886154 Msa1175520:CDS 35.0%
!! TACCAAGCAACTTGTTTCTA+AGG - chr8_1:6886140-6886159 None:intergenic 35.0%
TATTTACCTGGTAATTCCCA+TGG - chr8_1:6886216-6886235 None:intergenic 35.0%
!!! TTGTTGTTTTTCAGCTTGCT+CGG + chr8_1:6886300-6886319 Msa1175520:intron 35.0%
GACACAAGAAAAACCATTCT+TGG - chr8_1:6886342-6886361 None:intergenic 35.0%
GACCGTAACATTAGGATTAT+GGG + chr8_1:6886439-6886458 Msa1175520:CDS 35.0%
TACCATGAAAATCCTGTTCT+TGG + chr8_1:6886499-6886518 Msa1175520:CDS 35.0%
!! TTCTTGGTGTTAAGACCAAT+TGG + chr8_1:6886515-6886534 Msa1175520:CDS 35.0%
ATAGCAGAAAAAGACAGTGA+TGG - chr8_1:6887172-6887191 None:intergenic 35.0%
!! TTTGAAGCATTGGCTTGATT+TGG + chr8_1:6887311-6887330 Msa1175520:intron 35.0%
GCATACACATAAATACCAAG+AGG - chr8_1:6887338-6887357 None:intergenic 35.0%
AAGTCCTCTACAAAATTTGG+AGG - chr8_1:6887473-6887492 None:intergenic 35.0%
TCTCAGCTTTCTTAATCAAG+CGG - chr8_1:6887506-6887525 None:intergenic 35.0%
GGTATGATTGTATGTGATGA+AGG + chr8_1:6887546-6887565 Msa1175520:CDS 35.0%
GAAAATCAAGAAACAGCTGA+AGG + chr8_1:6887600-6887619 Msa1175520:CDS 35.0%
AAATATGGGGTCAATGTTTG+AGG + chr8_1:6887766-6887785 Msa1175520:CDS 35.0%
AAGTATTTGTCTGCTTGGAA+AGG - chr8_1:6887794-6887813 None:intergenic 35.0%
GAAGATTGTTGAGTAGAGAA+GGG - chr8_1:6887818-6887837 None:intergenic 35.0%
TGAAGATTGTTGAGTAGAGA+AGG - chr8_1:6887819-6887838 None:intergenic 35.0%
TTCAATCTATGGAAATGAGC+CGG + chr8_1:6887835-6887854 Msa1175520:CDS 35.0%
GAGTTCGAGAATAATAGTTC+CGG - chr8_1:6887857-6887876 None:intergenic 35.0%
GGAAGAACATCATGAATGAG+AGG - chr8_1:6884693-6884712 None:intergenic 40.0%
CTAACTCTTGATCTGTTGGA+CGG - chr8_1:6884731-6884750 None:intergenic 40.0%
AGTGATAAGATCCGATGACT+CGG + chr8_1:6884937-6884956 Msa1175520:CDS 40.0%
GAAAAACCATTCCGAGTCAT+CGG - chr8_1:6884951-6884970 None:intergenic 40.0%
!! AGAGGTACTGACGAAGTTAT+TGG + chr8_1:6885073-6885092 Msa1175520:CDS 40.0%
!! GAGGTACTGACGAAGTTATT+GGG + chr8_1:6885074-6885093 Msa1175520:CDS 40.0%
!!! TTGGTTTTAACACCAGGATG+AGG - chr8_1:6885130-6885149 None:intergenic 40.0%
! ATCCTGGTGTTAAAACCAAC+TGG + chr8_1:6885131-6885150 Msa1175520:CDS 40.0%
! TCCTGGTGTTAAAACCAACT+GGG + chr8_1:6885132-6885151 Msa1175520:CDS 40.0%
ATCTGACACTGACAACATCA+TGG - chr8_1:6885171-6885190 None:intergenic 40.0%
! CATGCATTTGAGACATCGAT+CGG + chr8_1:6885670-6885689 Msa1175520:intron 40.0%
! ACATTTGGGACGAACATGAT+CGG - chr8_1:6885766-6885785 None:intergenic 40.0%
! TTCCTCTTCGCCTTTTATCT+CGG - chr8_1:6885989-6886008 None:intergenic 40.0%
AAGAAGAATGGGAGGAAATG+AGG - chr8_1:6886061-6886080 None:intergenic 40.0%
ACAGGAGGAACAAGAAGAAT+GGG - chr8_1:6886072-6886091 None:intergenic 40.0%
AACAGGAGGAACAAGAAGAA+TGG - chr8_1:6886073-6886092 None:intergenic 40.0%
ATTCTTCTTGTTCCTCCTGT+TGG + chr8_1:6886072-6886091 Msa1175520:CDS 40.0%
CAAAATCTGAATCCAACAGG+AGG - chr8_1:6886087-6886106 None:intergenic 40.0%
GGACAAAATCTGAATCCAAC+AGG - chr8_1:6886090-6886109 None:intergenic 40.0%
! CTGATTAGCTCTTCATCTGT+TGG - chr8_1:6886111-6886130 None:intergenic 40.0%
ATATTCGCAAGTTCGAACCA+TGG + chr8_1:6886196-6886215 Msa1175520:CDS 40.0%
TATTCGCAAGTTCGAACCAT+GGG + chr8_1:6886197-6886216 Msa1175520:CDS 40.0%
!! AATGGTTTTTGGAAAGCGAC+TGG + chr8_1:6886412-6886431 Msa1175520:CDS 40.0%
!! TTTTTGGAAAGCGACTGGAA+TGG + chr8_1:6886417-6886436 Msa1175520:CDS 40.0%
GGACCGTAACATTAGGATTA+TGG + chr8_1:6886438-6886457 Msa1175520:CDS 40.0%
! CACCAAGAACAGGATTTTCA+TGG - chr8_1:6886504-6886523 None:intergenic 40.0%
!! TTGGTCTTAACACCAAGAAC+AGG - chr8_1:6886514-6886533 None:intergenic 40.0%
!! TGGTTTTACACCTTTCCACA+TGG + chr8_1:6887680-6887699 Msa1175520:intron 40.0%
!! AGGGAAAGTATTTGTCTGCT+TGG - chr8_1:6887799-6887818 None:intergenic 40.0%
! TAAGATCCGATGACTCGGAA+TGG + chr8_1:6884942-6884961 Msa1175520:CDS 45.0%
!!! ACCCAGTTGGTTTTAACACC+AGG - chr8_1:6885136-6885155 None:intergenic 45.0%
GTACTCACGAATAACCCAGT+TGG - chr8_1:6885149-6885168 None:intergenic 45.0%
GCATGAACCCAATCAATGCA+GGG - chr8_1:6885655-6885674 None:intergenic 45.0%
TGCATGAACCCAATCAATGC+AGG - chr8_1:6885656-6885675 None:intergenic 45.0%
TTCGAACCATGGGAATTACC+AGG + chr8_1:6886207-6886226 Msa1175520:CDS 45.0%
CTGGAATGGACCGTAACATT+AGG + chr8_1:6886431-6886450 Msa1175520:CDS 45.0%
ACAAACCTGGCGATCATCAA+AGG - chr8_1:6886566-6886585 None:intergenic 45.0%
GTGAATAGAGCTAGGTGACT+TGG + chr8_1:6886905-6886924 Msa1175520:intron 45.0%
!! TTGGCTTGATTTGGACCTCT+TGG + chr8_1:6887320-6887339 Msa1175520:intron 45.0%
GGAATTAAACTCGAACTCCG+AGG - chr8_1:6887421-6887440 None:intergenic 45.0%
GTAAGCAGTTCATCCTTGAC+AGG + chr8_1:6887633-6887652 Msa1175520:intron 45.0%
TCAGCATGTTCCATGTGGAA+AGG - chr8_1:6887693-6887712 None:intergenic 45.0%
TGTTCTCAGCATGTTCCATG+TGG - chr8_1:6887698-6887717 None:intergenic 45.0%
GGACGGAATCTGAATCCAAC+AGG - chr8_1:6884714-6884733 None:intergenic 50.0%
TACTACCTTGCTCCTCATCC+TGG + chr8_1:6885115-6885134 Msa1175520:CDS 50.0%
TAACACCAGGATGAGGAGCA+AGG - chr8_1:6885123-6885142 None:intergenic 50.0%
ACATGAAAAGCCGACTGCAG+TGG + chr8_1:6885792-6885811 Msa1175520:intron 50.0%
AGCCGAGATAAAAGGCGAAG+AGG + chr8_1:6885984-6886003 Msa1175520:CDS 50.0%
! GAGGCTGTCATTTGTCTGCT+AGG - chr8_1:6886042-6886061 None:intergenic 50.0%
GGAGGAACAAGAAGAATGGG+AGG - chr8_1:6886069-6886088 None:intergenic 50.0%
AACCTGGCGATCATCAAAGG+TGG - chr8_1:6886563-6886582 None:intergenic 50.0%
CACGTTTGCAACTGTCGAAG+AGG + chr8_1:6887925-6887944 Msa1175520:CDS 50.0%
TGGAGCGAGCTCAGTGGTAA+GGG + chr8_1:6885812-6885831 Msa1175520:intron 55.0%
! TGCCACCTTTGATGATCGCC+AGG + chr8_1:6886558-6886577 Msa1175520:CDS 55.0%
CGACAGTTGCAAACGTGCTC+TGG - chr8_1:6887922-6887941 None:intergenic 55.0%
TGAGCTCGCTCCACTGCAGT+CGG - chr8_1:6885805-6885824 None:intergenic 60.0%
GTGGAGCGAGCTCAGTGGTA+AGG + chr8_1:6885811-6885830 Msa1175520:intron 60.0%
CTGCAGTGGAGCGAGCTCAG+TGG + chr8_1:6885806-6885825 Msa1175520:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 6884675 6888018 6884675 ID=Msa1175520;Name=Msa1175520
chr8_1 mRNA 6884675 6888018 6884675 ID=Msa1175520-mRNA-1;Parent=Msa1175520;Name=Msa1175520-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|6|0|474
chr8_1 exon 6884675 6884852 6884675 ID=Msa1175520-mRNA-1:exon:2476;Parent=Msa1175520-mRNA-1
chr8_1 exon 6884930 6885210 6884930 ID=Msa1175520-mRNA-1:exon:2477;Parent=Msa1175520-mRNA-1
chr8_1 exon 6885952 6886228 6885952 ID=Msa1175520-mRNA-1:exon:2478;Parent=Msa1175520-mRNA-1
chr8_1 exon 6886314 6886579 6886314 ID=Msa1175520-mRNA-1:exon:2479;Parent=Msa1175520-mRNA-1
chr8_1 exon 6887486 6887632 6887486 ID=Msa1175520-mRNA-1:exon:2480;Parent=Msa1175520-mRNA-1
chr8_1 exon 6887743 6888018 6887743 ID=Msa1175520-mRNA-1:exon:2481;Parent=Msa1175520-mRNA-1
chr8_1 CDS 6884675 6884852 6884675 ID=Msa1175520-mRNA-1:cds;Parent=Msa1175520-mRNA-1
chr8_1 CDS 6884930 6885210 6884930 ID=Msa1175520-mRNA-1:cds;Parent=Msa1175520-mRNA-1
chr8_1 CDS 6885952 6886228 6885952 ID=Msa1175520-mRNA-1:cds;Parent=Msa1175520-mRNA-1
chr8_1 CDS 6886314 6886579 6886314 ID=Msa1175520-mRNA-1:cds;Parent=Msa1175520-mRNA-1
chr8_1 CDS 6887486 6887632 6887486 ID=Msa1175520-mRNA-1:cds;Parent=Msa1175520-mRNA-1
chr8_1 CDS 6887743 6888018 6887743 ID=Msa1175520-mRNA-1:cds;Parent=Msa1175520-mRNA-1
Gene Sequence

>Msa1175520

ATGACAACCTCATTTCCTCTCATTCATGATGTTCTTCCTGTTGGATTCAGATTCCGTCCAACAGATCAAGAGTTAGTAAACTACTATCTCAGAAACAAGTTACTTGGCAATGACGAGTTTGTTAACAATGCGATAGCTGAAGTTGATGTATTCAAGTATAAACCTTGGGATTTACCAGCTCATTCAGTGATAAGATCCGATGACTCGGAATGGTTTTTCTTGTGTCCTATTGAATACAAGTATGCAAAGAGCAATAAGCTTAAGAGAGCAACAAAGTTTGGATTTTGGAAAGCTACTGGAAAAGATCATTCGATTAAGAATAGAGGTACTGACGAAGTTATTGGGACGAAGAAGACTCTTGTTTACTACCTTGCTCCTCATCCTGGTGTTAAAACCAACTGGGTTATTCGTGAGTACCATGATGTTGTCAGTGTCAGATTTGATGATAATAATACACAGAGGACTTTTGTTTTGTGTCGCTTGATGAAAAAAGCCGAGATAAAAGGCGAAGAGGAAAATGATACAATGATGTGTGATGAAGGGGAGCCTAGCAGACAAATGACAGCCTCATTTCCTCCCATTCTTCTTGTTCCTCCTGTTGGATTCAGATTTTGTCCAACAGATGAAGAGCTAATCAGTCACTACCTTAGAAACAAGTTGCTTGGTAATGACACAATTGTAAACAATGTTATAGCTGAAGTTGATATTCGCAAGTTCGAACCATGGGAATTACCAGCTTGCTCGGTGATAAAATCTGATGACCAAGAATGGTTTTTCTTGTGTCCTATTAAATACAAGTATGCAAAGAGTAAAAGGATTAATAGGACAACAAAAAATGGTTTTTGGAAAGCGACTGGAATGGACCGTAACATTAGGATTATGGGTACCAATAAAGTTATTGGGATTAAGAAGACTCTTGTTTACCATGAAAATCCTGTTCTTGGTGTTAAGACCAATTGGATCATTCATGAGTATCATGATGCCACCTTTGATGATCGCCAGAGGACTTTTGTTTTGTGCCGCTTGATTAAGAAAGCTGAGAAAAAAATTGAAGAGGAAGCTGGTATGATTGTATGTGATGAAGGCGAGTCTAGTAGACACATGAGTTCTGACTGCGAAAATCAAGAAACAGCTGAAGGAATTTCAGATGTAAGTGGCACTTTGCCAGAAATAAATATGGGGTCAATGTTTGAGGAACCTTTCCAAGCAGACAAATACTTTCCCTTCTCTACTCAACAATCTTCAATCTATGGAAATGAGCCGGAACTATTATTCTCGAACTCACAATTTTACGATGCCTATTTAAAAAACGACAACAATGTTATCCAGAGCACGTTTGCAACTGTCGAAGAGGAAAACAAGTTTGTCAATTCGATGTTTGTTAATGCGGATTTTGTAACTAGTGAAAACAGAAGACAATCATAA
Protein sequence

>Msa1175520

MTTSFPLIHDVLPVGFRFRPTDQELVNYYLRNKLLGNDEFVNNAIAEVDVFKYKPWDLPAHSVIRSDDSEWFFLCPIEYKYAKSNKLKRATKFGFWKATGKDHSIKNRGTDEVIGTKKTLVYYLAPHPGVKTNWVIREYHDVVSVRFDDNNTQRTFVLCRLMKKAEIKGEEENDTMMCDEGEPSRQMTASFPPILLVPPVGFRFCPTDEELISHYLRNKLLGNDTIVNNVIAEVDIRKFEPWELPACSVIKSDDQEWFFLCPIKYKYAKSKRINRTTKNGFWKATGMDRNIRIMGTNKVIGIKKTLVYHENPVLGVKTNWIIHEYHDATFDDRQRTFVLCRLIKKAEKKIEEEAGMIVCDEGESSRHMSSDCENQETAEGISDVSGTLPEINMGSMFEEPFQADKYFPFSTQQSSIYGNEPELLFSNSQFYDAYLKNDNNVIQSTFATVEEENKFVNSMFVNADFVTSENRRQS*