AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1175540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1175540 MtrunA17_Chr8g0345691 73.786 206 53 1 188 393 1 205 1.06e-98 300
Msa1175540 MtrunA17_Chr8g0345691 60.000 190 70 4 1 190 1 184 5.69e-67 218
Msa1175540 MtrunA17_Chr8g0345671 73.171 205 54 1 188 392 1 204 5.90e-97 295
Msa1175540 MtrunA17_Chr8g0345671 65.263 190 59 5 1 190 1 183 3.12e-71 228
Msa1175540 MtrunA17_Chr8g0345731 87.248 149 19 0 10 158 22 170 4.06e-89 266
Msa1175540 MtrunA17_Chr8g0345731 62.914 151 51 3 198 343 23 173 3.39e-58 187
Msa1175540 MtrunA17_Chr8g0345721 67.980 203 33 3 162 335 1 200 6.52e-89 267
Msa1175540 MtrunA17_Chr8g0345721 50.000 188 57 5 1 158 26 206 2.84e-51 171
Msa1175540 MtrunA17_Chr8g0345741 83.333 138 23 0 210 347 2 139 1.77e-80 244
Msa1175540 MtrunA17_Chr8g0345741 54.545 143 60 2 23 165 2 139 1.84e-48 161
Msa1175540 MtrunA17_Chr8g0345711 63.636 154 55 1 188 340 1 154 2.11e-64 203
Msa1175540 MtrunA17_Chr8g0345711 64.052 153 52 1 1 153 1 150 3.62e-64 202
Msa1175540 MtrunA17_Chr3g0128111 44.865 185 87 6 198 375 41 217 5.90e-46 158
Msa1175540 MtrunA17_Chr3g0128111 46.821 173 80 6 15 184 45 208 2.25e-44 154
Msa1175540 MtrunA17_Chr8g0345701 56.376 149 47 5 201 335 9 153 1.17e-45 155
Msa1175540 MtrunA17_Chr8g0345701 49.068 161 60 6 12 158 7 159 8.09e-39 137
Msa1175540 MtrunA17_Chr5g0428991 48.421 190 82 6 7 191 20 198 1.30e-45 166
Msa1175540 MtrunA17_Chr5g0428991 51.572 159 64 6 201 351 27 180 2.84e-43 159
Msa1175540 MtrunA17_Chr3g0128151 48.571 175 80 6 7 177 17 185 2.55e-43 159
Msa1175540 MtrunA17_Chr3g0128151 47.977 173 74 7 188 352 14 178 6.31e-43 158
Msa1175540 MtrunA17_Chr8g0364791 43.671 158 80 5 195 346 2 156 1.30e-39 146
Msa1175540 MtrunA17_Chr8g0364791 35.385 195 107 7 15 197 9 196 1.48e-29 119
Msa1175540 MtrunA17_Chr8g0384201 44.304 158 79 5 195 346 2 156 4.49e-39 145
Msa1175540 MtrunA17_Chr8g0384201 33.679 193 113 6 15 197 9 196 7.01e-28 114
Msa1175540 MtrunA17_Chr2g0309891 46.250 160 73 5 195 347 5 158 8.01e-39 142
Msa1175540 MtrunA17_Chr2g0309891 40.764 157 82 5 12 163 6 156 8.95e-31 120
Msa1175540 MtrunA17_Chr3g0130101 45.161 155 76 5 198 346 6 157 1.93e-37 139
Msa1175540 MtrunA17_Chr3g0130101 39.610 154 81 6 15 163 10 156 6.16e-27 110
Msa1175540 MtrunA17_Chr1g0197361 43.605 172 87 5 202 365 11 180 1.01e-36 140
Msa1175540 MtrunA17_Chr1g0197361 38.756 209 108 8 15 213 11 209 8.15e-31 124
Msa1175540 MtrunA17_Chr6g0481091 47.682 151 70 5 202 346 9 156 2.66e-36 132
Msa1175540 MtrunA17_Chr6g0481091 44.516 155 78 5 12 163 6 155 4.28e-34 126
Msa1175540 MtrunA17_Chr5g0433781 46.711 152 72 4 202 347 9 157 2.80e-36 140
Msa1175540 MtrunA17_Chr5g0433781 42.945 163 73 6 12 165 6 157 1.13e-30 124
Msa1175540 MtrunA17_Chr3g0109821 39.394 198 102 5 202 384 9 203 3.94e-36 139
Msa1175540 MtrunA17_Chr3g0109821 42.604 169 82 7 12 171 6 168 7.17e-30 121
Msa1175540 MtrunA17_Chr5g0400461 43.478 161 82 4 202 354 9 168 5.29e-35 131
Msa1175540 MtrunA17_Chr5g0400461 42.515 167 88 3 12 173 6 169 5.37e-34 129
Msa1175540 MtrunA17_Chr2g0318101 39.000 200 92 6 184 359 3 196 1.33e-34 131
Msa1175540 MtrunA17_Chr2g0318101 46.154 143 68 4 12 152 15 150 1.17e-33 128
Msa1175540 MtrunA17_Chr3g0124761 43.195 169 80 6 202 361 10 171 9.82e-34 127
Msa1175540 MtrunA17_Chr3g0124761 44.118 136 64 5 12 145 7 132 1.44e-27 110
Msa1175540 MtrunA17_Chr1g0197351 44.586 157 72 4 202 346 45 198 1.90e-33 130
Msa1175540 MtrunA17_Chr1g0197351 46.970 132 63 4 12 142 42 167 3.66e-27 112
Msa1175540 MtrunA17_Chr4g0054791 42.308 182 95 6 202 376 9 187 7.50e-33 125
Msa1175540 MtrunA17_Chr4g0054791 44.375 160 82 4 12 167 6 162 1.40e-32 124
Msa1175540 MtrunA17_Chr3g0092671 43.046 151 79 3 202 347 8 156 1.58e-32 128
Msa1175540 MtrunA17_Chr3g0092671 40.964 166 81 5 15 169 8 167 8.50e-28 114
Msa1175540 MtrunA17_Chr8g0385991 41.975 162 78 4 202 352 17 173 2.59e-32 121
Msa1175540 MtrunA17_Chr8g0385991 40.152 132 72 3 12 143 14 138 2.10e-23 97.4
Msa1175540 MtrunA17_Chr4g0047841 48.872 133 59 4 12 142 15 140 4.33e-32 124
Msa1175540 MtrunA17_Chr4g0047841 36.058 208 96 6 184 362 3 202 2.64e-31 122
Msa1175540 MtrunA17_Chr3g0139331 42.675 157 80 5 195 347 10 160 1.75e-31 122
Msa1175540 MtrunA17_Chr3g0139331 38.182 165 91 6 12 174 11 166 6.70e-25 104
Msa1175540 MtrunA17_Chr3g0130731 44.586 157 72 5 202 349 10 160 1.81e-31 121
Msa1175540 MtrunA17_Chr3g0130731 47.794 136 59 5 12 145 7 132 1.05e-30 119
Msa1175540 MtrunA17_Chr1g0201021 43.373 166 79 7 182 345 6 158 1.96e-31 125
Msa1175540 MtrunA17_Chr1g0201021 43.038 158 75 7 8 164 16 159 3.91e-28 115
Msa1175540 MtrunA17_Chr8g0384721 38.095 189 98 6 202 377 10 192 3.67e-31 120
Msa1175540 MtrunA17_Chr8g0384721 39.306 173 83 7 12 175 7 166 8.96e-29 113
Msa1175540 MtrunA17_Chr8g0361731 38.235 170 87 4 199 353 14 180 4.95e-31 122
Msa1175540 MtrunA17_Chr8g0361731 42.636 129 69 3 15 143 17 140 1.64e-26 109
Msa1175540 MtrunA17_Chr7g0214071 42.138 159 79 5 202 353 18 170 5.86e-31 119
Msa1175540 MtrunA17_Chr7g0214071 39.759 166 84 6 12 171 15 170 6.42e-27 107
Msa1175540 MtrunA17_Chr1g0183741 40.373 161 89 5 202 358 13 170 5.86e-31 119
Msa1175540 MtrunA17_Chr1g0183741 36.757 185 101 6 12 196 10 178 1.01e-27 110
Msa1175540 MtrunA17_Chr2g0326361 38.298 188 90 7 180 353 2 177 6.72e-31 120
Msa1175540 MtrunA17_Chr2g0326361 42.537 134 68 4 12 143 14 140 8.07e-27 109
Msa1175540 MtrunA17_Chr7g0263931 40.000 155 80 5 202 346 14 165 7.71e-31 120
Msa1175540 MtrunA17_Chr7g0263931 35.321 218 112 8 12 207 11 221 2.71e-30 119
Msa1175540 MtrunA17_Chr4g0017921 44.737 152 77 5 199 346 8 156 8.59e-31 120
Msa1175540 MtrunA17_Chr4g0017921 38.953 172 97 5 12 180 8 174 1.65e-26 108
Msa1175540 MtrunA17_Chr7g0217721 50.394 127 57 5 201 326 21 142 8.81e-31 120
Msa1175540 MtrunA17_Chr7g0217721 45.038 131 61 6 14 142 21 142 1.70e-23 100
Msa1175540 MtrunA17_Chr7g0252971 38.251 183 83 8 202 361 11 186 1.66e-30 119
Msa1175540 MtrunA17_Chr7g0252971 35.323 201 105 8 12 194 8 201 2.78e-28 113
Msa1175540 MtrunA17_Chr7g0217711 48.819 127 59 5 201 326 21 142 1.80e-30 115
Msa1175540 MtrunA17_Chr7g0217711 44.275 131 62 5 14 142 21 142 5.74e-25 100
Msa1175540 MtrunA17_Chr4g0042561 42.767 159 68 6 202 346 12 161 3.87e-30 117
Msa1175540 MtrunA17_Chr4g0042561 47.328 131 62 5 12 142 9 132 1.51e-27 110
Msa1175540 MtrunA17_Chr5g0398971 43.590 156 76 6 199 346 7 158 3.96e-30 119
Msa1175540 MtrunA17_Chr5g0398971 41.667 132 72 4 12 142 7 134 4.22e-26 107
Msa1175540 MtrunA17_Chr5g0417001 36.905 168 89 4 199 352 14 178 4.31e-30 119
Msa1175540 MtrunA17_Chr5g0417001 42.636 129 69 4 15 143 17 140 4.45e-25 105
Msa1175540 MtrunA17_Chr4g0018391 42.138 159 84 5 193 346 1 156 5.14e-30 118
Msa1175540 MtrunA17_Chr4g0018391 42.424 132 70 4 12 142 7 133 2.57e-25 105
Msa1175540 MtrunA17_Chr4g0060931 40.909 154 78 7 202 347 20 168 7.92e-30 118
Msa1175540 MtrunA17_Chr4g0060931 44.697 132 66 6 12 143 17 141 2.54e-25 105
Msa1175540 MtrunA17_Chr2g0309331 41.279 172 88 6 199 359 10 179 8.22e-30 117
Msa1175540 MtrunA17_Chr2g0309331 38.202 178 90 7 12 177 10 179 8.91e-26 106
Msa1175540 MtrunA17_Chr3g0091921 39.674 184 85 10 172 347 2 167 8.48e-30 117
Msa1175540 MtrunA17_Chr3g0091921 37.629 194 99 10 12 196 16 196 1.24e-25 105
Msa1175540 MtrunA17_Chr2g0321741 51.261 119 52 5 231 348 23 136 9.89e-30 117
Msa1175540 MtrunA17_Chr2g0321741 44.118 136 62 6 33 166 13 136 3.30e-24 102
Msa1175540 MtrunA17_Chr6g0453131 39.634 164 80 5 199 347 15 174 1.23e-29 118
Msa1175540 MtrunA17_Chr6g0453131 42.537 134 70 5 10 143 14 140 1.72e-25 106
Msa1175540 MtrunA17_Chr2g0311661 39.759 166 79 5 200 346 22 185 2.47e-29 115
Msa1175540 MtrunA17_Chr2g0311661 39.706 136 75 5 10 142 18 149 7.57e-24 100
Msa1175540 MtrunA17_Chr4g0056541 38.636 176 98 6 193 361 1 173 3.01e-29 116
Msa1175540 MtrunA17_Chr4g0056541 40.909 132 72 4 12 142 7 133 3.81e-24 102
Msa1175540 MtrunA17_Chr4g0038751 39.474 152 87 4 198 347 14 162 3.45e-29 115
Msa1175540 MtrunA17_Chr4g0038751 36.184 152 89 5 15 165 18 162 3.02e-20 90.1
Msa1175540 MtrunA17_Chr8g0372121 41.333 150 80 5 202 346 9 155 4.49e-29 115
Msa1175540 MtrunA17_Chr8g0372121 41.667 132 71 4 12 142 6 132 1.96e-25 105
Msa1175540 MtrunA17_Chr1g0147421 40.127 157 85 4 195 347 26 177 5.74e-29 115
Msa1175540 MtrunA17_Chr1g0147421 42.105 133 69 3 12 142 27 153 2.86e-25 105
Msa1175540 MtrunA17_Chr5g0405211 39.506 162 90 5 202 358 11 169 6.43e-29 115
Msa1175540 MtrunA17_Chr5g0405211 42.105 133 71 4 12 143 8 135 2.14e-26 108
Msa1175540 MtrunA17_Chr1g0200561 41.830 153 81 5 199 346 19 168 8.05e-29 115
Msa1175540 MtrunA17_Chr1g0200561 37.662 154 89 5 12 163 19 167 4.14e-25 105
Msa1175540 MtrunA17_Chr4g0076731 38.554 166 92 6 199 360 54 213 9.00e-29 116
Msa1175540 MtrunA17_Chr4g0076731 39.623 159 85 6 10 165 52 202 3.58e-26 109
Msa1175540 MtrunA17_Chr2g0318081 38.788 165 90 6 202 360 19 178 9.53e-29 115
Msa1175540 MtrunA17_Chr2g0318081 43.885 139 67 5 6 142 10 139 4.20e-27 110
Msa1175540 MtrunA17_Chr6g0484441 41.333 150 79 6 202 347 8 152 9.67e-29 114
Msa1175540 MtrunA17_Chr6g0484441 42.105 133 66 5 12 142 5 128 8.22e-24 100
Msa1175540 MtrunA17_Chr2g0312321 37.931 174 92 6 202 366 14 180 1.31e-28 113
Msa1175540 MtrunA17_Chr2g0312321 39.850 133 69 5 12 143 11 133 1.81e-22 96.7
Msa1175540 MtrunA17_Chr7g0261411 41.667 144 79 4 202 343 13 153 1.42e-28 113
Msa1175540 MtrunA17_Chr7g0261411 41.985 131 71 3 12 142 10 135 1.01e-26 108
Msa1175540 MtrunA17_Chr8g0359921 40.361 166 78 7 202 355 17 173 1.62e-28 114
Msa1175540 MtrunA17_Chr8g0359921 42.143 140 70 5 6 143 8 138 1.70e-25 105
Msa1175540 MtrunA17_Chr4g0026141 39.216 153 81 4 202 343 8 159 2.13e-28 112
Msa1175540 MtrunA17_Chr4g0026141 39.416 137 76 4 10 143 3 135 1.19e-22 96.3
Msa1175540 MtrunA17_Chr5g0417791 41.765 170 74 8 202 357 6 164 2.42e-28 112
Msa1175540 MtrunA17_Chr5g0417791 45.455 132 65 6 12 143 3 127 2.40e-26 106
Msa1175540 MtrunA17_Chr6g0461661 41.406 128 71 3 201 327 20 144 5.12e-28 113
Msa1175540 MtrunA17_Chr6g0461661 41.791 134 69 4 12 143 18 144 5.52e-25 105
Msa1175540 MtrunA17_Chr3g0131911 39.394 165 81 5 202 352 17 176 6.53e-28 110
Msa1175540 MtrunA17_Chr3g0131911 40.602 133 70 4 12 142 14 139 7.76e-23 96.3
Msa1175540 MtrunA17_Chr2g0316971 46.032 126 64 3 202 326 26 148 7.53e-28 113
Msa1175540 MtrunA17_Chr2g0316971 44.275 131 68 3 12 142 23 148 2.06e-25 106
Msa1175540 MtrunA17_Chr2g0311651 45.385 130 66 4 200 326 23 150 9.46e-28 111
Msa1175540 MtrunA17_Chr2g0311651 38.971 136 76 5 10 142 19 150 1.11e-23 100
Msa1175540 MtrunA17_Chr6g0453451 42.953 149 73 5 202 349 23 160 1.10e-27 111
Msa1175540 MtrunA17_Chr6g0453451 45.802 131 64 5 12 142 20 143 5.61e-25 103
Msa1175540 MtrunA17_Chr7g0253011 43.750 128 66 4 202 326 20 144 6.51e-27 110
Msa1175540 MtrunA17_Chr7g0253011 44.361 133 67 5 12 142 17 144 1.42e-24 103
Msa1175540 MtrunA17_Chr3g0144271 42.857 126 69 2 202 326 26 149 9.19e-27 110
Msa1175540 MtrunA17_Chr3g0144271 42.857 133 68 3 12 142 23 149 2.21e-24 103
Msa1175540 MtrunA17_Chr8g0346001 37.433 187 95 8 199 369 15 195 1.30e-25 107
Msa1175540 MtrunA17_Chr8g0346001 37.278 169 91 8 12 178 15 170 1.03e-23 102
Msa1175540 MtrunA17_Chr2g0321631 39.610 154 80 5 202 343 7 159 1.37e-25 103
Msa1175540 MtrunA17_Chr2g0321631 36.842 152 88 5 13 160 5 152 5.56e-21 91.3
Msa1175540 MtrunA17_Chr5g0442771 43.077 130 69 4 199 326 18 144 2.49e-25 104
Msa1175540 MtrunA17_Chr5g0442771 41.667 132 70 5 12 142 19 144 1.26e-22 97.1
Msa1175540 MtrunA17_Chr7g0266701 34.161 161 91 5 202 348 7 166 7.33e-22 94.0
Msa1175540 MtrunA17_Chr7g0266701 34.483 145 88 6 9 150 1 141 1.50e-16 79.0
Msa1175540 MtrunA17_Chr3g0113001 39.394 132 67 6 250 372 13 140 2.04e-17 82.0
Msa1175540 MtrunA17_Chr3g0113001 42.169 83 40 4 63 143 13 89 2.07e-12 67.4
Msa1175540 MtrunA17_Chr4g0050701 28.070 171 100 6 202 360 14 173 2.33e-17 79.7
Msa1175540 MtrunA17_Chr4g0050701 32.331 133 73 5 12 142 11 128 1.35e-15 74.7
Msa1175540 MtrunA17_Chr8g0384351 31.481 162 90 7 202 362 13 154 1.13e-15 74.7
Msa1175540 MtrunA17_Chr8g0384351 31.953 169 91 6 12 180 10 154 3.82e-14 70.5
Msa1175540 MtrunA17_Chr3g0130321 27.184 206 116 6 202 383 10 205 2.25e-15 74.3
Msa1175540 MtrunA17_Chr3g0130321 31.507 146 88 5 12 156 7 141 2.59e-12 65.5
Msa1175540 MtrunA17_Chr7g0243371 41.176 85 48 2 245 327 6 90 7.68e-15 70.5
Msa1175540 MtrunA17_Chr7g0274971 26.768 198 109 8 205 381 11 193 1.13e-11 63.9
Msa1175540 MtrunA17_Chr3g0113031 38.793 116 57 6 267 372 5 116 1.29e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1175540 AT4G01550.1 49.444 180 82 3 200 370 5 184 1.16e-48 171
Msa1175540 AT4G01550.1 47.436 156 73 4 14 166 6 155 1.67e-38 144
Msa1175540 AT3G49530.2 51.479 169 69 6 193 354 10 172 5.12e-47 166
Msa1175540 AT3G49530.2 45.029 171 86 5 7 173 8 174 1.59e-41 151
Msa1175540 AT3G49530.1 51.479 169 69 6 193 354 10 172 1.30e-46 166
Msa1175540 AT3G49530.1 45.029 171 86 5 7 173 8 174 5.27e-41 151
Msa1175540 AT4G35580.1 50.588 170 72 5 188 351 1 164 1.48e-45 164
Msa1175540 AT4G35580.1 51.572 159 65 5 9 162 6 157 6.53e-44 159
Msa1175540 AT4G35580.3 50.588 170 72 5 188 351 1 164 1.63e-45 164
Msa1175540 AT4G35580.3 51.572 159 65 5 9 162 6 157 8.94e-44 159
Msa1175540 AT4G35580.2 50.588 170 72 5 188 351 1 164 1.69e-45 164
Msa1175540 AT4G35580.2 51.572 159 65 5 9 162 6 157 8.89e-44 159
Msa1175540 AT1G33060.2 51.497 167 71 6 187 346 11 174 1.03e-44 164
Msa1175540 AT1G33060.2 48.810 168 73 6 1 162 12 172 2.64e-40 152
Msa1175540 AT1G33060.1 51.497 167 71 6 187 346 11 174 1.09e-44 164
Msa1175540 AT1G33060.1 48.810 168 73 6 1 162 12 172 2.96e-40 151
Msa1175540 AT4G01520.1 42.784 194 99 5 202 383 7 200 1.21e-44 157
Msa1175540 AT4G01520.1 41.667 156 85 4 13 166 5 156 5.87e-32 123
Msa1175540 AT4G01540.4 42.857 196 100 5 200 383 5 200 1.49e-44 159
Msa1175540 AT4G01540.4 42.581 155 83 4 14 166 6 156 3.50e-31 122
Msa1175540 AT4G01540.2 42.857 196 100 5 200 383 5 200 2.31e-44 159
Msa1175540 AT4G01540.2 42.581 155 83 4 14 166 6 156 3.69e-31 123
Msa1175540 AT4G01540.3 42.857 196 100 5 200 383 5 200 5.82e-44 158
Msa1175540 AT4G01540.3 42.581 155 83 4 14 166 6 156 4.70e-31 123
Msa1175540 AT5G24590.2 49.383 162 71 5 193 348 10 166 6.73e-44 158
Msa1175540 AT5G24590.2 47.590 166 74 7 7 166 8 166 1.61e-38 144
Msa1175540 AT4G01540.1 42.857 196 100 5 200 383 5 200 7.45e-44 159
Msa1175540 AT4G01540.1 42.581 155 83 4 14 166 6 156 5.59e-31 123
Msa1175540 AT3G10490.1 44.118 170 78 5 184 346 19 178 6.86e-41 145
Msa1175540 AT3G10490.1 39.157 166 90 5 2 162 17 176 9.67e-31 118
Msa1175540 AT3G10480.1 44.706 170 77 5 184 346 19 178 5.33e-40 148
Msa1175540 AT3G10480.1 40.606 165 89 4 2 162 17 176 9.89e-31 122
Msa1175540 AT4G17980.1 44.379 169 79 4 188 348 1 162 9.97e-40 142
Msa1175540 AT4G17980.1 42.857 161 82 4 12 166 6 162 9.48e-34 127
Msa1175540 AT3G10480.2 44.379 169 78 5 184 346 19 177 2.71e-39 146
Msa1175540 AT3G10480.2 43.972 141 74 3 2 142 17 152 2.96e-30 121
Msa1175540 AT4G17980.2 44.379 169 79 4 188 348 1 162 2.72e-39 142
Msa1175540 AT4G17980.2 42.857 161 82 4 12 166 6 162 1.37e-33 127
Msa1175540 AT3G10490.2 44.118 170 78 5 184 346 19 178 4.57e-39 145
Msa1175540 AT3G10490.2 41.290 155 80 5 12 161 27 175 1.75e-29 119
Msa1175540 AT3G17730.1 43.750 176 80 6 202 371 9 171 4.97e-38 137
Msa1175540 AT3G17730.1 42.077 183 87 8 12 191 6 172 2.09e-34 128
Msa1175540 AT5G17260.1 48.026 152 69 4 202 346 9 157 5.21e-38 143
Msa1175540 AT5G17260.1 48.092 131 63 3 12 142 6 131 4.34e-32 126
Msa1175540 AT3G03200.1 48.026 152 69 4 202 346 9 157 2.82e-37 141
Msa1175540 AT3G03200.1 48.092 131 63 3 12 142 6 131 4.35e-31 124
Msa1175540 AT3G10500.1 47.024 168 73 7 186 347 3 160 1.59e-36 140
Msa1175540 AT3G10500.1 42.604 169 80 8 12 171 9 169 2.12e-27 114
Msa1175540 AT2G27300.1 39.899 198 103 8 202 392 17 205 3.23e-36 135
Msa1175540 AT2G27300.1 43.590 156 70 7 15 166 17 158 1.19e-29 117
Msa1175540 AT1G02230.1 44.737 152 79 4 201 349 5 154 1.08e-35 134
Msa1175540 AT1G02230.1 44.099 161 78 5 13 171 4 154 2.16e-34 130
Msa1175540 AT5G04410.1 43.452 168 79 5 186 347 3 160 3.12e-35 136
Msa1175540 AT5G04410.1 39.766 171 82 7 12 171 9 169 1.27e-26 112
Msa1175540 AT1G65910.1 42.697 178 91 6 202 371 9 183 2.39e-34 134
Msa1175540 AT1G65910.1 39.785 186 100 6 12 191 6 185 3.17e-31 125
Msa1175540 AT3G10480.3 38.424 203 75 7 184 346 19 211 1.26e-33 131
Msa1175540 AT3G10480.3 33.838 198 89 6 2 162 17 209 1.94e-24 105
Msa1175540 AT1G01720.1 44.516 155 70 5 202 346 10 158 2.34e-33 126
Msa1175540 AT1G01720.1 31.915 235 139 7 12 235 7 231 9.61e-29 114
Msa1175540 AT5G39820.1 45.000 140 73 3 199 337 20 156 2.35e-33 127
Msa1175540 AT5G39820.1 42.105 133 72 3 10 142 18 145 1.30e-27 112
Msa1175540 AT5G46590.1 42.262 168 82 5 188 348 1 160 2.56e-33 126
Msa1175540 AT5G46590.1 40.373 161 88 4 12 168 6 162 4.63e-30 117
Msa1175540 AT5G09330.5 47.403 154 66 5 202 346 9 156 2.60e-33 130
Msa1175540 AT5G09330.5 43.226 155 80 4 12 163 6 155 1.39e-28 117
Msa1175540 AT5G09330.2 47.403 154 66 5 202 346 9 156 2.60e-33 130
Msa1175540 AT5G09330.2 43.226 155 80 4 12 163 6 155 1.39e-28 117
Msa1175540 AT5G09330.4 47.403 154 66 5 202 346 9 156 2.60e-33 130
Msa1175540 AT5G09330.4 43.226 155 80 4 12 163 6 155 1.39e-28 117
Msa1175540 AT5G09330.3 47.403 154 66 5 202 346 9 156 2.60e-33 130
Msa1175540 AT5G09330.3 43.226 155 80 4 12 163 6 155 1.39e-28 117
Msa1175540 AT5G09330.1 47.403 154 66 5 202 346 9 156 2.60e-33 130
Msa1175540 AT5G09330.1 43.226 155 80 4 12 163 6 155 1.39e-28 117
Msa1175540 AT5G08790.1 40.957 188 89 7 201 372 9 190 3.22e-33 125
Msa1175540 AT5G08790.1 39.320 206 88 9 12 196 7 196 1.06e-30 119
Msa1175540 AT1G26870.1 37.438 203 95 6 199 372 16 215 6.64e-33 128
Msa1175540 AT1G26870.1 42.857 133 71 3 10 142 14 141 2.49e-26 109
Msa1175540 AT5G64060.1 44.371 151 75 4 202 346 9 156 7.80e-33 126
Msa1175540 AT5G64060.1 41.401 157 80 6 12 163 6 155 1.40e-26 109
Msa1175540 AT5G61430.1 44.156 154 73 7 202 347 19 167 1.50e-32 125
Msa1175540 AT5G61430.1 45.802 131 64 4 12 142 16 139 1.02e-26 109
Msa1175540 AT3G04070.2 39.429 175 86 6 202 360 13 183 5.69e-32 124
Msa1175540 AT3G04070.2 36.022 186 97 6 12 182 10 188 4.84e-28 113
Msa1175540 AT1G34190.1 43.396 159 75 5 198 347 15 167 9.83e-32 126
Msa1175540 AT1G34190.1 39.785 186 87 8 1 171 1 176 1.57e-26 111
Msa1175540 AT3G44290.2 41.026 156 85 5 194 348 9 158 1.20e-31 120
Msa1175540 AT3G44290.2 42.197 173 84 9 1 169 1 161 4.50e-30 115
Msa1175540 AT5G22290.1 42.581 155 79 6 199 350 21 168 1.28e-31 123
Msa1175540 AT5G22290.1 43.871 155 72 8 15 166 24 166 1.94e-29 117
Msa1175540 AT1G54330.1 44.595 148 76 4 202 346 9 153 2.67e-31 121
Msa1175540 AT1G54330.1 40.132 152 86 3 12 163 6 152 9.61e-28 111
Msa1175540 AT3G12910.1 35.897 195 102 5 200 374 22 213 4.02e-31 120
Msa1175540 AT3G12910.1 42.308 130 68 4 15 142 24 148 3.18e-26 107
Msa1175540 AT5G39610.1 43.137 153 74 6 202 346 23 170 6.89e-31 119
Msa1175540 AT5G39610.1 48.855 131 60 6 12 142 20 143 8.41e-28 111
Msa1175540 AT2G17040.1 41.333 150 83 4 200 347 7 153 8.19e-31 119
Msa1175540 AT2G17040.1 38.065 155 82 7 15 165 9 153 4.03e-22 95.5
Msa1175540 AT5G46590.2 43.972 141 70 4 188 327 1 133 9.13e-31 119
Msa1175540 AT5G46590.2 42.308 156 84 4 12 167 6 155 1.43e-30 119
Msa1175540 AT1G32510.1 38.202 178 91 5 188 353 1 171 9.54e-31 119
Msa1175540 AT1G32510.1 39.535 172 86 5 7 166 1 166 2.05e-30 118
Msa1175540 AT5G62380.2 37.368 190 107 7 193 376 1 184 9.74e-31 120
Msa1175540 AT5G62380.2 42.222 135 72 4 9 142 4 133 4.86e-25 105
Msa1175540 AT5G62380.1 37.368 190 107 7 193 376 1 184 9.74e-31 120
Msa1175540 AT5G62380.1 42.222 135 72 4 9 142 4 133 4.86e-25 105
Msa1175540 AT5G07680.2 43.137 153 74 7 202 346 6 153 1.22e-30 119
Msa1175540 AT5G07680.2 42.484 153 76 6 12 164 3 143 2.80e-26 107
Msa1175540 AT3G44290.1 41.026 156 85 5 194 348 9 158 1.43e-30 120
Msa1175540 AT3G44290.1 44.231 156 75 7 15 169 17 161 3.15e-29 116
Msa1175540 AT5G07680.1 43.137 153 74 7 202 346 20 167 1.58e-30 119
Msa1175540 AT5G07680.1 42.484 153 76 6 12 164 17 157 3.52e-26 107
Msa1175540 AT5G66300.1 43.791 153 73 6 202 346 15 162 1.83e-30 119
Msa1175540 AT5G66300.1 42.105 133 71 4 12 143 12 139 4.06e-27 109
Msa1175540 AT1G61110.1 49.624 133 57 5 12 142 16 140 1.93e-30 119
Msa1175540 AT1G61110.1 43.571 140 70 5 190 326 7 140 1.87e-28 114
Msa1175540 AT2G24430.2 42.105 152 80 4 202 348 19 167 1.96e-30 119
Msa1175540 AT2G24430.2 39.623 159 85 5 12 166 16 167 6.61e-28 112
Msa1175540 AT2G24430.1 42.105 152 80 4 202 348 19 167 1.96e-30 119
Msa1175540 AT2G24430.1 39.623 159 85 5 12 166 16 167 6.61e-28 112
Msa1175540 AT3G29035.1 38.421 190 102 8 202 383 27 209 2.17e-30 119
Msa1175540 AT3G29035.1 48.092 131 61 6 12 142 24 147 3.75e-27 110
Msa1175540 AT1G33280.1 44.737 152 77 5 199 346 8 156 2.90e-30 118
Msa1175540 AT1G33280.1 41.830 153 83 4 12 163 8 155 1.63e-27 110
Msa1175540 AT1G77450.1 36.842 209 109 7 202 393 13 215 3.05e-30 117
Msa1175540 AT1G77450.1 41.791 134 70 4 12 145 10 135 5.52e-26 105
Msa1175540 AT4G27410.2 40.909 154 74 6 202 346 17 162 3.06e-30 118
Msa1175540 AT4G27410.2 39.286 168 78 7 6 163 8 161 9.26e-28 111
Msa1175540 AT1G34180.3 42.138 159 77 5 198 347 15 167 4.07e-30 120
Msa1175540 AT1G34180.3 43.939 132 69 3 11 142 15 141 4.27e-26 109
Msa1175540 AT3G04070.1 45.455 132 65 4 202 329 13 141 4.84e-30 119
Msa1175540 AT3G04070.1 41.781 146 73 5 12 152 10 148 1.39e-27 112
Msa1175540 AT3G15510.1 37.079 178 90 6 203 361 21 195 5.53e-30 119
Msa1175540 AT3G15510.1 44.961 129 62 4 16 142 21 142 3.20e-27 111
Msa1175540 AT3G04060.1 39.665 179 90 7 202 372 23 191 5.62e-30 118
Msa1175540 AT3G04060.1 45.865 133 62 6 12 142 20 144 1.29e-26 109
Msa1175540 AT1G76420.1 40.667 150 81 4 202 346 25 171 7.91e-30 118
Msa1175540 AT1G76420.1 37.143 175 92 6 12 180 22 184 1.56e-26 108
Msa1175540 AT1G34180.1 46.923 130 65 3 198 326 15 141 9.33e-30 121
Msa1175540 AT1G34180.1 43.939 132 69 3 11 142 15 141 9.54e-26 109
Msa1175540 AT4G10350.1 39.500 200 103 8 199 391 9 197 9.92e-30 117
Msa1175540 AT4G10350.1 42.424 132 70 4 12 142 9 135 1.01e-24 103
Msa1175540 AT5G18270.2 36.979 192 100 7 202 385 24 202 1.10e-29 117
Msa1175540 AT5G18270.2 45.038 131 66 4 12 142 21 145 1.81e-25 105
Msa1175540 AT3G15500.1 41.290 155 72 6 202 346 17 162 2.02e-29 116
Msa1175540 AT3G15500.1 36.559 186 93 8 6 181 8 178 1.19e-27 111
Msa1175540 AT1G02250.1 40.116 172 89 6 13 181 4 164 2.21e-29 117
Msa1175540 AT1G02250.1 43.137 153 80 5 201 349 5 154 4.68e-29 116
Msa1175540 AT5G63790.1 40.113 177 85 7 184 346 33 202 2.44e-29 116
Msa1175540 AT5G63790.1 39.474 190 90 9 12 191 50 224 7.97e-28 112
Msa1175540 AT5G63790.2 40.113 177 85 7 184 346 43 212 2.46e-29 116
Msa1175540 AT5G63790.2 39.474 190 90 9 12 191 60 234 8.14e-28 112
Msa1175540 AT1G69490.1 38.251 183 93 8 188 358 1 175 2.67e-29 115
Msa1175540 AT1G69490.1 35.266 207 103 10 12 194 9 208 1.57e-25 104
Msa1175540 AT2G02450.1 37.714 175 96 7 198 368 50 215 2.77e-29 117
Msa1175540 AT2G02450.1 43.846 130 63 5 15 142 54 175 2.62e-25 106
Msa1175540 AT5G18270.1 36.458 192 101 7 202 385 24 202 3.89e-29 116
Msa1175540 AT5G18270.1 44.275 131 67 4 12 142 21 145 7.77e-25 104
Msa1175540 AT2G33480.2 43.506 154 73 7 202 350 18 162 4.09e-29 114
Msa1175540 AT2G33480.2 42.105 152 77 5 12 162 15 156 9.04e-26 105
Msa1175540 AT5G53950.1 40.764 157 82 5 198 346 16 169 4.99e-29 116
Msa1175540 AT5G53950.1 45.455 132 67 4 11 142 16 142 4.27e-26 108
Msa1175540 AT1G52890.1 38.857 175 88 6 202 366 17 182 5.24e-29 115
Msa1175540 AT1G52890.1 34.848 198 100 8 4 191 6 184 6.72e-27 109
Msa1175540 AT1G12260.2 38.994 159 89 5 193 346 1 156 5.27e-29 115
Msa1175540 AT1G12260.2 39.394 132 74 4 12 142 7 133 1.31e-24 103
Msa1175540 AT2G02450.2 38.889 162 89 6 198 355 50 205 5.59e-29 117
Msa1175540 AT2G02450.2 43.846 130 63 5 15 142 54 175 3.87e-25 106
Msa1175540 AT5G04395.1 40.690 145 72 4 202 333 31 174 7.60e-29 111
Msa1175540 AT5G04395.1 41.096 146 71 4 12 145 28 170 2.99e-28 110
Msa1175540 AT2G33480.1 42.949 156 73 7 202 350 18 164 1.10e-28 113
Msa1175540 AT2G33480.1 45.455 132 62 4 12 143 15 136 8.95e-26 105
Msa1175540 AT1G12260.1 38.994 159 89 5 193 346 1 156 1.28e-28 115
Msa1175540 AT1G12260.1 39.394 132 74 4 12 142 7 133 2.54e-24 103
Msa1175540 AT3G15170.1 40.909 154 80 5 202 347 23 173 1.37e-28 114
Msa1175540 AT3G15170.1 43.182 132 70 4 11 142 19 145 4.89e-24 101
Msa1175540 AT4G36160.1 40.667 150 81 5 202 346 13 159 1.61e-28 115
Msa1175540 AT4G36160.1 36.364 187 103 7 12 189 10 189 1.79e-26 109
Msa1175540 AT4G36160.3 40.667 150 81 5 202 346 13 159 1.61e-28 115
Msa1175540 AT4G36160.3 36.364 187 103 7 12 189 10 189 1.79e-26 109
Msa1175540 AT1G62700.1 42.000 150 79 5 202 346 10 156 1.61e-28 115
Msa1175540 AT1G62700.1 40.909 132 72 4 12 142 7 133 4.68e-24 103
Msa1175540 AT1G62700.2 42.000 150 79 5 202 346 10 156 1.61e-28 115
Msa1175540 AT1G62700.2 40.909 132 72 4 12 142 7 133 4.68e-24 103
Msa1175540 AT1G71930.2 41.558 154 82 5 202 350 12 162 1.67e-28 114
Msa1175540 AT1G71930.2 37.956 137 79 4 7 142 4 135 6.18e-24 101
Msa1175540 AT1G71930.1 41.558 154 82 5 202 350 12 162 1.67e-28 114
Msa1175540 AT1G71930.1 37.956 137 79 4 7 142 4 135 6.18e-24 101
Msa1175540 AT4G36160.2 40.667 150 81 5 202 346 17 163 1.79e-28 115
Msa1175540 AT4G36160.2 36.364 187 103 7 12 189 14 193 2.06e-26 109
Msa1175540 AT5G22380.1 34.197 193 109 7 199 378 5 192 2.57e-28 111
Msa1175540 AT5G22380.1 38.298 141 77 5 8 143 1 136 1.06e-20 90.5
Msa1175540 AT1G01010.1 42.949 156 79 4 201 348 5 158 3.01e-28 115
Msa1175540 AT1G01010.1 38.922 167 81 7 14 171 5 159 2.66e-22 98.2
Msa1175540 AT2G18060.3 40.523 153 83 5 199 346 9 158 4.13e-28 114
Msa1175540 AT2G18060.3 41.353 133 72 4 12 143 9 136 2.13e-25 106
Msa1175540 AT2G18060.1 40.523 153 83 5 199 346 9 158 4.13e-28 114
Msa1175540 AT2G18060.1 41.353 133 72 4 12 143 9 136 2.13e-25 106
Msa1175540 AT1G79580.3 44.079 152 79 5 199 346 17 166 5.05e-28 114
Msa1175540 AT1G79580.3 39.869 153 87 4 12 163 17 165 5.88e-25 105
Msa1175540 AT1G79580.5 44.079 152 79 5 199 346 17 166 5.05e-28 114
Msa1175540 AT1G79580.5 39.869 153 87 4 12 163 17 165 5.88e-25 105
Msa1175540 AT1G79580.4 44.079 152 79 5 199 346 17 166 5.05e-28 114
Msa1175540 AT1G79580.4 39.869 153 87 4 12 163 17 165 5.88e-25 105
Msa1175540 AT1G79580.2 44.079 152 79 5 199 346 17 166 5.05e-28 114
Msa1175540 AT1G79580.2 39.869 153 87 4 12 163 17 165 5.88e-25 105
Msa1175540 AT1G79580.1 44.079 152 79 5 199 346 17 166 5.05e-28 114
Msa1175540 AT1G79580.1 39.869 153 87 4 12 163 17 165 5.88e-25 105
Msa1175540 AT5G13180.1 39.355 155 82 5 202 350 17 165 5.06e-28 111
Msa1175540 AT5G13180.1 43.284 134 64 4 12 143 14 137 1.16e-25 104
Msa1175540 AT2G43000.1 34.171 199 112 8 200 384 19 212 1.03e-27 110
Msa1175540 AT2G43000.1 38.562 153 83 6 15 163 21 166 5.25e-26 106
Msa1175540 AT4G27410.3 37.870 169 75 7 202 346 17 179 1.11e-27 111
Msa1175540 AT4G27410.3 36.612 183 79 8 6 163 8 178 3.91e-25 104
Msa1175540 AT3G18400.1 39.073 151 82 6 202 347 8 153 3.59e-27 110
Msa1175540 AT3G18400.1 37.179 156 89 6 12 165 5 153 2.15e-23 99.8
Msa1175540 AT1G56010.2 35.165 182 99 5 179 351 5 176 3.88e-27 110
Msa1175540 AT1G56010.2 40.152 132 71 4 12 142 19 143 2.14e-23 100
Msa1175540 AT1G34180.4 42.958 142 65 4 198 326 15 153 8.17e-27 111
Msa1175540 AT1G34180.4 41.667 144 67 5 11 142 15 153 3.14e-23 101
Msa1175540 AT1G02220.1 42.069 145 79 4 201 344 5 145 1.26e-26 110
Msa1175540 AT1G02220.1 40.260 154 82 4 13 165 4 148 5.24e-22 97.1
Msa1175540 AT1G34180.2 42.958 142 65 4 198 326 15 153 1.45e-26 112
Msa1175540 AT1G34180.2 41.667 144 67 5 11 142 15 153 5.92e-23 101
Msa1175540 AT3G04420.2 39.333 150 87 4 201 348 5 152 5.73e-26 106
Msa1175540 AT3G04420.2 42.105 133 70 4 13 143 4 131 2.81e-22 96.3
Msa1175540 AT3G04420.1 39.333 150 87 4 201 348 5 152 1.12e-25 106
Msa1175540 AT3G04420.1 42.105 133 70 4 13 143 4 131 3.10e-22 97.1
Msa1175540 AT4G28530.1 37.423 163 83 4 202 347 13 173 1.61e-25 106
Msa1175540 AT4G28530.1 39.041 146 70 4 12 142 10 151 1.22e-23 101
Msa1175540 AT3G12977.1 34.463 177 104 5 202 371 21 192 1.96e-25 104
Msa1175540 AT3G12977.1 30.601 183 106 7 12 185 18 188 1.28e-20 91.3
Msa1175540 AT2G46770.1 33.816 207 107 8 199 380 16 217 2.62e-25 106
Msa1175540 AT2G46770.1 39.394 132 74 4 12 142 16 142 3.50e-22 97.4
Msa1175540 AT3G61910.1 37.576 165 80 6 202 346 14 175 5.74e-25 104
Msa1175540 AT3G61910.1 39.394 132 74 4 12 142 11 137 3.04e-22 97.1
Msa1175540 AT3G04430.1 43.284 134 62 4 205 327 6 136 5.39e-24 98.6
Msa1175540 AT3G04430.1 38.519 135 70 5 18 143 6 136 9.15e-17 78.6
Msa1175540 AT3G44350.2 34.615 156 92 4 201 347 7 161 6.16e-24 99.8
Msa1175540 AT3G44350.2 35.556 135 78 4 12 142 5 134 8.07e-17 79.7
Msa1175540 AT3G44350.1 37.984 129 76 3 201 326 7 134 1.15e-23 96.7
Msa1175540 AT3G44350.1 35.556 135 78 4 12 142 5 134 4.14e-17 78.6
Msa1175540 AT1G52880.1 40.741 162 73 6 203 346 21 177 3.17e-23 99.4
Msa1175540 AT1G52880.1 45.038 131 61 5 16 142 21 144 2.26e-22 97.1
Msa1175540 AT1G32770.1 36.364 165 85 6 199 346 16 177 9.94e-23 98.6
Msa1175540 AT1G32770.1 38.636 132 75 4 12 142 16 142 6.10e-22 96.7
Msa1175540 AT1G32870.2 40.909 154 78 6 202 347 13 161 3.03e-22 99.0
Msa1175540 AT1G32870.2 43.511 131 67 4 12 142 10 133 6.36e-20 92.0
Msa1175540 AT1G32870.1 40.909 154 78 6 202 347 13 161 3.22e-22 99.0
Msa1175540 AT1G32870.1 43.511 131 67 4 12 142 10 133 7.10e-20 91.7
Msa1175540 AT1G32870.3 40.909 154 78 6 202 347 49 197 3.43e-22 99.0
Msa1175540 AT1G32870.3 43.511 131 67 4 12 142 46 169 9.55e-20 91.7
Msa1175540 AT5G64530.2 36.800 125 65 5 202 326 6 116 6.58e-19 83.6
Msa1175540 AT5G64530.2 34.586 133 66 5 12 142 3 116 2.69e-17 79.0
Msa1175540 AT5G64530.1 37.600 125 64 5 202 326 6 116 2.25e-18 82.8
Msa1175540 AT5G64530.1 34.586 133 66 5 12 142 3 116 1.59e-17 80.5
Msa1175540 AT5G61430.2 40.566 106 53 5 250 347 1 104 3.23e-17 81.6
Msa1175540 AT5G61430.2 42.169 83 40 3 63 143 1 77 3.12e-11 63.9
Msa1175540 AT4G10350.2 35.333 150 81 6 248 391 11 150 1.52e-16 80.1
Msa1175540 AT4G10350.2 40.244 82 45 2 61 142 11 88 3.92e-11 63.9
Msa1175540 AT4G28530.2 42.202 109 46 3 12 105 10 116 1.78e-16 80.1
Msa1175540 AT4G28530.2 37.736 106 49 2 202 292 13 116 6.20e-14 72.4
Msa1175540 AT3G12977.2 34.146 123 72 3 256 371 19 139 4.49e-16 77.4
Msa1175540 AT1G56010.1 35.238 105 57 3 256 351 7 109 3.21e-15 75.5
Msa1175540 AT2G33480.3 40.367 109 54 6 250 350 2 107 3.87e-14 71.2
Msa1175540 AT3G10490.4 43.750 80 36 3 274 346 1 78 3.66e-13 70.5
Msa1175540 AT3G10490.3 43.750 80 36 3 274 346 1 78 3.66e-13 70.5
Msa1175540 AT3G56530.1 31.973 147 92 5 202 343 55 198 4.00e-12 67.0
Msa1175540 AT5G14000.2 29.851 134 84 4 201 331 17 143 1.19e-11 62.8
Msa1175540 AT3G55210.1 31.098 164 95 9 195 343 6 166 2.04e-11 64.7
Msa1175540 AT5G14000.1 29.851 134 84 4 201 331 17 143 5.08e-11 62.4

Find 66 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAATCCCAATAACTTTAT+TGG 0.134192 8_1:-6952846 None:intergenic
GAGCAACAACGTCTGGATTT+TGG 0.178239 8_1:+6951132 Msa1175540:CDS
TGAACATACTATTAAGATTA+AGG 0.192880 8_1:+6951169 Msa1175540:CDS
CTTAATGCTACGATCCTTTC+CGG 0.233094 8_1:-6952813 None:intergenic
AGAGGTACCAATAAAGTTAT+TGG 0.244855 8_1:+6952839 Msa1175540:CDS
ACAAGTATGCAAAGAGTAAA+AGG 0.285734 8_1:+6952753 Msa1175540:CDS
CAAAGAGTAAAAGGTTTAAA+AGG 0.311590 8_1:+6952762 Msa1175540:CDS
GAGGTACCAATAAAGTTATT+GGG 0.318938 8_1:+6952840 Msa1175540:CDS
TTTAAAAGGACAACTAATAA+TGG 0.327657 8_1:+6952776 Msa1175540:CDS
AACTCCCTGTTAGGACCAAT+TGG 0.333702 8_1:+6951255 Msa1175540:CDS
ATAACCCAATTGGTCCTAAC+AGG 0.335133 8_1:-6951260 None:intergenic
TTTGCATACTTGTATTCAAT+AGG 0.337933 8_1:-6952743 None:intergenic
TTAACTAGTTCTTCATTTGT+TGG 0.345648 8_1:-6950852 None:intergenic
TTGCATACTTGTATTCAATA+GGG 0.378474 8_1:-6952742 None:intergenic
TACCATGAAAATCCTGTTCC+AGG 0.382828 8_1:+6952881 Msa1175540:CDS
TTTAACCGAGCAACAACGTC+TGG 0.412950 8_1:+6951125 Msa1175540:CDS
TTCCAGGTGTTAAGACCAAT+TGG 0.424821 8_1:+6952897 Msa1175540:CDS
CTGGAAATAAACTCCCTGTT+AGG 0.433781 8_1:+6951246 Msa1175540:CDS
GATAATAAAATCACATGATC+CGG 0.433828 8_1:+6951052 Msa1175540:CDS
GAACATACTATTAAGATTAA+GGG 0.434986 8_1:+6951170 Msa1175540:CDS
GAAAATCAAGACACATTAGA+AGG 0.435447 8_1:+6954633 Msa1175540:CDS
AAAAGAGGTTGTCATTTGTC+TGG 0.436743 8_1:-6952432 None:intergenic
AGCTATAACATTGTTTGCAA+TGG 0.437112 8_1:-6952555 None:intergenic
CACCTTTGATGATGATAGAC+AGG 0.438825 8_1:+6951304 Msa1175540:CDS
TTGGTCTTAACACCTGGAAC+AGG 0.456063 8_1:-6952893 None:intergenic
TCATCACATATCATTGTATC+CGG 0.462516 8_1:-6954576 None:intergenic
CTGAGTCCAACCAGAACAAA+AGG 0.469755 8_1:-6952467 None:intergenic
GATCGTAGCATTAAGATTAG+AGG 0.479770 8_1:+6952821 Msa1175540:CDS
ATACTCATGTATAACCCAAT+TGG 0.481974 8_1:-6951270 None:intergenic
TATACAATGGTGTGTGATGA+AGG 0.485940 8_1:+6952398 Msa1175540:CDS
TTAACAAGCTCTTCATCTGT+TGG 0.486592 8_1:-6952497 None:intergenic
CTAGTTCTTCATTTGTTGGT+CGG 0.491063 8_1:-6950848 None:intergenic
ATACTCATGAATGATCCAAT+TGG 0.492502 8_1:-6952912 None:intergenic
GGTCGGAATCTGAATCCAAC+AGG 0.499422 8_1:-6950831 None:intergenic
TACCTCAAGAACAAGTTACT+TGG 0.504698 8_1:+6950879 Msa1175540:CDS
TAAAATCTGATGACCAAGAA+TGG 0.512088 8_1:+6952708 Msa1175540:CDS
GATACAATGATATGTGATGA+AGG 0.517905 8_1:+6954579 Msa1175540:CDS
TGCCACCTTTGATGATCACC+AGG 0.520522 8_1:+6952940 Msa1175540:CDS
GGTTGTCATTTGTCTGGTGG+AGG 0.528553 8_1:-6952426 None:intergenic
ATCCAATTGGTCTTAACACC+TGG 0.530386 8_1:-6952899 None:intergenic
ACCAGAACAAAAGGAAGCGT+TGG 0.531838 8_1:-6952458 None:intergenic
ACTCCCTGTTAGGACCAATT+GGG 0.533087 8_1:+6951256 Msa1175540:CDS
TACATACATGGTAACTCCCA+TGG 0.535236 8_1:-6950957 None:intergenic
TGTATGCAAGTACGAACCTT+GGG 0.541003 8_1:+6952586 Msa1175540:CDS
GGAAGAAAATCAAGAATGAG+AGG 0.550129 8_1:-6950810 None:intergenic
AGAGGTTGTCATTTGTCTGG+TGG 0.555008 8_1:-6952429 None:intergenic
ATACAATGATATGTGATGAA+GGG 0.563785 8_1:+6954580 Msa1175540:CDS
ACAAACCTGGTGATCATCAA+AGG 0.565673 8_1:-6952945 None:intergenic
AAAATCCAGACGTTGTTGCT+CGG 0.567070 8_1:-6951130 None:intergenic
TACGAACCTTGGGACTTACC+AGG 0.570351 8_1:+6952596 Msa1175540:CDS
TACAATGGTGTGTGATGAAG+GGG 0.571785 8_1:+6952400 Msa1175540:CDS
TACAATGATATGTGATGAAG+GGG 0.583689 8_1:+6954581 Msa1175540:CDS
TAAAATCACATGATCCGGAA+TGG 0.584287 8_1:+6951057 Msa1175540:CDS
AACCTGTCTATCATCATCAA+AGG 0.586671 8_1:-6951306 None:intergenic
TACCAAGTAACTTGTTCTTG+AGG 0.595191 8_1:-6950881 None:intergenic
TGAAGAGGAAAATTATACAA+TGG 0.596603 8_1:+6952385 Msa1175540:CDS
AGGAAGCGTTGGAAGAAAAG+AGG 0.598173 8_1:-6952447 None:intergenic
AAATCTGCAAACATCAACTT+CGG 0.604080 8_1:-6950931 None:intergenic
ATGTTTGCAGATTTGAACCA+TGG 0.607995 8_1:+6950940 Msa1175540:CDS
ATGTATGCAAGTACGAACCT+TGG 0.609666 8_1:+6952585 Msa1175540:CDS
ATACAATGGTGTGTGATGAA+GGG 0.616411 8_1:+6952399 Msa1175540:CDS
ATTTCATACTTGTAATCACA+AGG 0.625621 8_1:-6951092 None:intergenic
TGTTTGCAGATTTGAACCAT+GGG 0.627236 8_1:+6950941 Msa1175540:CDS
TAACCCAATTGGTCCTAACA+GGG 0.647415 8_1:-6951259 None:intergenic
AACCTGGTGATCATCAAAGG+TGG 0.671633 8_1:-6952942 None:intergenic
AATGCTACGATCCTTTCCGG+TGG 0.677399 8_1:-6952810 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATTTTTTATGAAAGTT+AGG - chr8_1:6951514-6951533 None:intergenic 10.0%
!!! GTTGTTATTTTTTTTTTTTT+TGG + chr8_1:6951961-6951980 Msa1175540:intron 10.0%
!!! TTTTTAAGAAAATAATGATA+GGG - chr8_1:6952637-6952656 None:intergenic 10.0%
!!! TTTTTTAAGAAAATAATGAT+AGG - chr8_1:6952638-6952657 None:intergenic 10.0%
!!! TATTTTGAAACAAATTTTTT+TGG + chr8_1:6953447-6953466 Msa1175540:intron 10.0%
!!! TGATTTAATATATTCTATTT+TGG + chr8_1:6954425-6954444 Msa1175540:intron 10.0%
!! TTATAAGAAAATAATGATGA+CGG - chr8_1:6950993-6951012 None:intergenic 15.0%
!! GAAATTAATATTTATGAAAG+TGG - chr8_1:6952279-6952298 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr8_1:6953321-6953340 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr8_1:6953320-6953339 Msa1175540:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr8_1:6953344-6953363 Msa1175540:intron 15.0%
!!! TTTTTAAAATATTAAGGAAG+AGG - chr8_1:6954470-6954489 None:intergenic 15.0%
!! TATAAGAAAATAATGATGAC+GGG - chr8_1:6950992-6951011 None:intergenic 20.0%
!! TGAACATACTATTAAGATTA+AGG + chr8_1:6951169-6951188 Msa1175540:CDS 20.0%
!! GAACATACTATTAAGATTAA+GGG + chr8_1:6951170-6951189 Msa1175540:CDS 20.0%
!!! GACTCAAAATGATTTTTTTA+GGG - chr8_1:6951382-6951401 None:intergenic 20.0%
!!! TGACTCAAAATGATTTTTTT+AGG - chr8_1:6951383-6951402 None:intergenic 20.0%
!!! TTTTGAGATGAATTTTTTGT+TGG + chr8_1:6951595-6951614 Msa1175540:intron 20.0%
!! AAAGTAATAAATACTCACTT+CGG + chr8_1:6951993-6952012 Msa1175540:intron 20.0%
!! ACAAAAATGTCAAAATTGTT+AGG - chr8_1:6952208-6952227 None:intergenic 20.0%
!! TACCTTAAAAATAAGATACT+TGG + chr8_1:6952524-6952543 Msa1175540:CDS 20.0%
!!! TACCAAGTATCTTATTTTTA+AGG - chr8_1:6952529-6952548 None:intergenic 20.0%
!! TTTAAAAGGACAACTAATAA+TGG + chr8_1:6952776-6952795 Msa1175540:CDS 20.0%
!!! TGTTGTATTGATATTGTAAA+AGG - chr8_1:6953202-6953221 None:intergenic 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG + chr8_1:6953287-6953306 Msa1175540:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr8_1:6953330-6953349 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr8_1:6953407-6953426 Msa1175540:intron 20.0%
!! GATTGAAATGCATTTAATAA+GGG - chr8_1:6953525-6953544 None:intergenic 20.0%
!! TGATTGAAATGCATTTAATA+AGG - chr8_1:6953526-6953545 None:intergenic 20.0%
!!! ATTAGCAATGTTAATTTTGA+TGG - chr8_1:6953603-6953622 None:intergenic 20.0%
!!! ATGTTTTTTCCTCAAAAAAT+AGG - chr8_1:6953715-6953734 None:intergenic 20.0%
!! AAAGAACAAATTAAAACATG+AGG - chr8_1:6954029-6954048 None:intergenic 20.0%
!! ACTCTTAACAAATGTTATAT+GGG - chr8_1:6954118-6954137 None:intergenic 20.0%
!! AACTCTTAACAAATGTTATA+TGG - chr8_1:6954119-6954138 None:intergenic 20.0%
!! AGAATATATTAAATCACCAA+AGG - chr8_1:6954421-6954440 None:intergenic 20.0%
!! TTAACTAGTTCTTCATTTGT+TGG - chr8_1:6950855-6950874 None:intergenic 25.0%
! GAAGGATTATATCAAAAAGA+AGG - chr8_1:6951017-6951036 None:intergenic 25.0%
! GATAATAAAATCACATGATC+CGG + chr8_1:6951052-6951071 Msa1175540:CDS 25.0%
! ATTTCATACTTGTAATCACA+AGG - chr8_1:6951095-6951114 None:intergenic 25.0%
!!! AAAAAATCATTTTGAGTCAC+TGG + chr8_1:6951384-6951403 Msa1175540:intron 25.0%
!! TATTGAAACCCTTTTTCTTT+TGG + chr8_1:6951469-6951488 Msa1175540:intron 25.0%
! ACATGATTCCAAAAGAAAAA+GGG - chr8_1:6951480-6951499 None:intergenic 25.0%
! AACATGATTCCAAAAGAAAA+AGG - chr8_1:6951481-6951500 None:intergenic 25.0%
!! AAAATGATCACATTTTGCAT+CGG + chr8_1:6951532-6951551 Msa1175540:intron 25.0%
! AAAAGAGTTACTTAAAGTAG+TGG - chr8_1:6951578-6951597 None:intergenic 25.0%
!!! AGATGAATTTTTTGTTGGAA+TGG + chr8_1:6951600-6951619 Msa1175540:intron 25.0%
!! TAAACTTGTTTCACTTTGTA+TGG - chr8_1:6951643-6951662 None:intergenic 25.0%
! CTATGAATAAATGATGTATG+TGG - chr8_1:6952089-6952108 None:intergenic 25.0%
!! AATTCAACATCTAGTTTAGA+TGG - chr8_1:6952158-6952177 None:intergenic 25.0%
! ATTAAAAATGCCGAGAAAAA+AGG + chr8_1:6952362-6952381 Msa1175540:CDS 25.0%
! TGAAGAGGAAAATTATACAA+TGG + chr8_1:6952385-6952404 Msa1175540:CDS 25.0%
!! AAATAATGATAGGGTTTGTT+TGG - chr8_1:6952628-6952647 None:intergenic 25.0%
! TTGCATACTTGTATTCAATA+GGG - chr8_1:6952745-6952764 None:intergenic 25.0%
! TTTGCATACTTGTATTCAAT+AGG - chr8_1:6952746-6952765 None:intergenic 25.0%
! CAAAGAGTAAAAGGTTTAAA+AGG + chr8_1:6952762-6952781 Msa1175540:CDS 25.0%
! CTTAATCCCAATAACTTTAT+TGG - chr8_1:6952849-6952868 None:intergenic 25.0%
! TATTAAACTAGTCCTATATC+AGG + chr8_1:6953084-6953103 Msa1175540:intron 25.0%
! CTACACAACTCAAAATTTAT+GGG - chr8_1:6953119-6953138 None:intergenic 25.0%
! TCTACACAACTCAAAATTTA+TGG - chr8_1:6953120-6953139 None:intergenic 25.0%
! TAGACAACATGTATAGAAAT+AGG + chr8_1:6953136-6953155 Msa1175540:intron 25.0%
! AAACTTAACACATTTATTCG+TGG - chr8_1:6953559-6953578 None:intergenic 25.0%
! ATAACCGTGTAAAATTCAAA+AGG + chr8_1:6953633-6953652 Msa1175540:intron 25.0%
! TAACCGTGTAAAATTCAAAA+GGG + chr8_1:6953634-6953653 Msa1175540:intron 25.0%
!!! TAAACGTAACCTATTTTTTG+AGG + chr8_1:6953703-6953722 Msa1175540:intron 25.0%
!!! GTGTATTGTTTTTATAGTGT+AGG + chr8_1:6953975-6953994 Msa1175540:intron 25.0%
! AAGAGTTTGAATTTATAACC+TGG + chr8_1:6954132-6954151 Msa1175540:intron 25.0%
!! TTTACTTTGTATGAGTGTTT+TGG + chr8_1:6954283-6954302 Msa1175540:intron 25.0%
! TTCCGTTGTGTTTATTTATT+TGG + chr8_1:6954328-6954347 Msa1175540:intron 25.0%
! TGCCAAATAAATAAACACAA+CGG - chr8_1:6954333-6954352 None:intergenic 25.0%
! ATATATTAAATCACCAAAGG+TGG - chr8_1:6954418-6954437 None:intergenic 25.0%
! ATACAATGATATGTGATGAA+GGG + chr8_1:6954580-6954599 Msa1175540:CDS 25.0%
! ATTCTTGATTTTCTTCCTGT+TGG + chr8_1:6950816-6950835 Msa1175540:CDS 30.0%
AAATCTGCAAACATCAACTT+CGG - chr8_1:6950934-6950953 None:intergenic 30.0%
!!! GGGTTTGTTTTTTACATACA+TGG - chr8_1:6950972-6950991 None:intergenic 30.0%
! GTTTTCTATTTGAAAGCTAC+TGG + chr8_1:6951227-6951246 Msa1175540:CDS 30.0%
ATACTCATGTATAACCCAAT+TGG - chr8_1:6951273-6951292 None:intergenic 30.0%
!!! AGGTTTGTTTTGTAATAGCA+AGG + chr8_1:6951324-6951343 Msa1175540:intron 30.0%
! GCATAAATTTTGTTGACGAT+TGG + chr8_1:6951425-6951444 Msa1175540:intron 30.0%
!!! GATTGGTTGTTCTGAAATTT+TGG + chr8_1:6951442-6951461 Msa1175540:intron 30.0%
!!! AGCATTGACTTGATTTGTTT+TGG + chr8_1:6951674-6951693 Msa1175540:intron 30.0%
TTATATGATCTATCACCTCA+GGG - chr8_1:6951742-6951761 None:intergenic 30.0%
TTTATATGATCTATCACCTC+AGG - chr8_1:6951743-6951762 None:intergenic 30.0%
AACCACCAATGTTTCAATTA+TGG + chr8_1:6951847-6951866 Msa1175540:intron 30.0%
GTATGATATTTGTGATGTCT+CGG - chr8_1:6952186-6952205 None:intergenic 30.0%
! ATGAGTCCTCTACAAAATTT+TGG - chr8_1:6952327-6952346 None:intergenic 30.0%
AGCTATAACATTGTTTGCAA+TGG - chr8_1:6952558-6952577 None:intergenic 30.0%
TAAAATCTGATGACCAAGAA+TGG + chr8_1:6952708-6952727 Msa1175540:CDS 30.0%
ACAAGTATGCAAAGAGTAAA+AGG + chr8_1:6952753-6952772 Msa1175540:CDS 30.0%
! GGACAACTAATAATGGTTTT+TGG + chr8_1:6952783-6952802 Msa1175540:CDS 30.0%
!! AGAGGTACCAATAAAGTTAT+TGG + chr8_1:6952839-6952858 Msa1175540:CDS 30.0%
! GAGGTACCAATAAAGTTATT+GGG + chr8_1:6952840-6952859 Msa1175540:CDS 30.0%
ATACTCATGAATGATCCAAT+TGG - chr8_1:6952915-6952934 None:intergenic 30.0%
TACTGTAAACATAACAAACC+TGG - chr8_1:6952961-6952980 None:intergenic 30.0%
!! GGTTTGTTATGTTTACAGTA+AGG + chr8_1:6952961-6952980 Msa1175540:intron 30.0%
!! ATTTTGAGTATCATTTGTCG+TGG + chr8_1:6953016-6953035 Msa1175540:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr8_1:6953238-6953257 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr8_1:6953239-6953258 Msa1175540:intron 30.0%
! TGTCCCTTTTGAATTTTACA+CGG - chr8_1:6953640-6953659 None:intergenic 30.0%
! ACTATAAAAGTATATCGTCC+CGG + chr8_1:6953813-6953832 Msa1175540:intron 30.0%
ACATATGTGGTGATATACAA+GGG + chr8_1:6953845-6953864 Msa1175540:intron 30.0%
ACTCTTAAAGTGAATAAGTG+AGG - chr8_1:6953891-6953910 None:intergenic 30.0%
TAAAAGTTTATCTTTCTCGC+TGG - chr8_1:6953940-6953959 None:intergenic 30.0%
GAACAAATTAAAACATGAGG+AGG - chr8_1:6954026-6954045 None:intergenic 30.0%
AACAAATGTTATATGGGACA+GGG - chr8_1:6954112-6954131 None:intergenic 30.0%
TAACAAATGTTATATGGGAC+AGG - chr8_1:6954113-6954132 None:intergenic 30.0%
TTGAATTTGAACTTTCATCC+AGG - chr8_1:6954153-6954172 None:intergenic 30.0%
!! ACTTAAAGCTTCCTTTTTCA+TGG + chr8_1:6954204-6954223 Msa1175540:intron 30.0%
! AGACTCTTAACTTTGTGTTT+TGG + chr8_1:6954355-6954374 Msa1175540:intron 30.0%
!!! TCTTAACTTTGTGTTTTGGT+GGG + chr8_1:6954359-6954378 Msa1175540:intron 30.0%
! TCATCATCCAAATTTTGTAG+AGG + chr8_1:6954499-6954518 Msa1175540:intron 30.0%
CAAAAGTCCTCTACAAAATT+TGG - chr8_1:6954509-6954528 None:intergenic 30.0%
AGCTGAGAAAAATATTGAAG+AGG + chr8_1:6954551-6954570 Msa1175540:CDS 30.0%
GAAAAATATTGAAGAGGAAC+CGG + chr8_1:6954557-6954576 Msa1175540:CDS 30.0%
TCATCACATATCATTGTATC+CGG - chr8_1:6954579-6954598 None:intergenic 30.0%
GATACAATGATATGTGATGA+AGG + chr8_1:6954579-6954598 Msa1175540:CDS 30.0%
TACAATGATATGTGATGAAG+GGG + chr8_1:6954581-6954600 Msa1175540:CDS 30.0%
GAAAATCAAGACACATTAGA+AGG + chr8_1:6954633-6954652 Msa1175540:CDS 30.0%
GGAAGAAAATCAAGAATGAG+AGG - chr8_1:6950813-6950832 None:intergenic 35.0%
! CTAGTTCTTCATTTGTTGGT+CGG - chr8_1:6950851-6950870 None:intergenic 35.0%
TACCTCAAGAACAAGTTACT+TGG + chr8_1:6950879-6950898 Msa1175540:CDS 35.0%
!! TACCAAGTAACTTGTTCTTG+AGG - chr8_1:6950884-6950903 None:intergenic 35.0%
ATGTTTGCAGATTTGAACCA+TGG + chr8_1:6950940-6950959 Msa1175540:CDS 35.0%
TGTTTGCAGATTTGAACCAT+GGG + chr8_1:6950941-6950960 Msa1175540:CDS 35.0%
ATCGAACAAGCTGAAAAAGA+AGG - chr8_1:6951035-6951054 None:intergenic 35.0%
TAAAATCACATGATCCGGAA+TGG + chr8_1:6951057-6951076 Msa1175540:CDS 35.0%
GGACAAAAGAAAAACCATTC+CGG - chr8_1:6951074-6951093 None:intergenic 35.0%
AACCTGTCTATCATCATCAA+AGG - chr8_1:6951309-6951328 None:intergenic 35.0%
!!! CTTTTGGAATCATGTTCTAC+TGG + chr8_1:6951485-6951504 Msa1175540:intron 35.0%
! AATATTGATTATCCTCCCTG+AGG + chr8_1:6951724-6951743 Msa1175540:intron 35.0%
TGGTTGTTATGAAGATCAGA+CGG - chr8_1:6951832-6951851 None:intergenic 35.0%
AGCCATAATTGAAACATTGG+TGG - chr8_1:6951852-6951871 None:intergenic 35.0%
GTCAGCCATAATTGAAACAT+TGG - chr8_1:6951855-6951874 None:intergenic 35.0%
! TACCCTCCAAAATTTTGTAG+AGG + chr8_1:6952318-6952337 Msa1175540:intron 35.0%
! GTCCTCTACAAAATTTTGGA+GGG - chr8_1:6952323-6952342 None:intergenic 35.0%
! AGTCCTCTACAAAATTTTGG+AGG - chr8_1:6952324-6952343 None:intergenic 35.0%
!!! TTCCTCTTCACCTTTTTTCT+CGG - chr8_1:6952375-6952394 None:intergenic 35.0%
TATACAATGGTGTGTGATGA+AGG + chr8_1:6952398-6952417 Msa1175540:CDS 35.0%
ATACAATGGTGTGTGATGAA+GGG + chr8_1:6952399-6952418 Msa1175540:CDS 35.0%
! AAAAGAGGTTGTCATTTGTC+TGG - chr8_1:6952435-6952454 None:intergenic 35.0%
TTAACAAGCTCTTCATCTGT+TGG - chr8_1:6952500-6952519 None:intergenic 35.0%
GATCGTAGCATTAAGATTAG+AGG + chr8_1:6952821-6952840 Msa1175540:CDS 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr8_1:6953369-6953388 Msa1175540:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr8_1:6953373-6953392 Msa1175540:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr8_1:6953473-6953492 Msa1175540:intron 35.0%
!!! AAGGGACACTTATTTTGAGA+CGG + chr8_1:6953652-6953671 Msa1175540:intron 35.0%
GACATATGTGGTGATATACA+AGG + chr8_1:6953844-6953863 Msa1175540:intron 35.0%
AGTGAATAAGTGAGGAATCA+GGG - chr8_1:6953883-6953902 None:intergenic 35.0%
AAGTGAATAAGTGAGGAATC+AGG - chr8_1:6953884-6953903 None:intergenic 35.0%
ACAAATGTTATATGGGACAG+GGG - chr8_1:6954111-6954130 None:intergenic 35.0%
! GAAGGCGTAAGTAAACATAT+TGG - chr8_1:6954237-6954256 None:intergenic 35.0%
!! CTCTTAACTTTGTGTTTTGG+TGG + chr8_1:6954358-6954377 Msa1175540:intron 35.0%
TACATACATGGTAACTCCCA+TGG - chr8_1:6950960-6950979 None:intergenic 40.0%
AAAATCCAGACGTTGTTGCT+CGG - chr8_1:6951133-6951152 None:intergenic 40.0%
!! TCTGGATTTTGGAAAGCTAC+TGG + chr8_1:6951143-6951162 Msa1175540:CDS 40.0%
CTGGAAATAAACTCCCTGTT+AGG + chr8_1:6951246-6951265 Msa1175540:CDS 40.0%
TAACCCAATTGGTCCTAACA+GGG - chr8_1:6951262-6951281 None:intergenic 40.0%
ATAACCCAATTGGTCCTAAC+AGG - chr8_1:6951263-6951282 None:intergenic 40.0%
!! CACCTTTGATGATGATAGAC+AGG + chr8_1:6951304-6951323 Msa1175540:CDS 40.0%
CTGGAACTGAATGAGTAGTA+TGG + chr8_1:6951403-6951422 Msa1175540:intron 40.0%
TAATCGTGCGAGAATGTTCA+AGG - chr8_1:6951778-6951797 None:intergenic 40.0%
TTCAATTATGGCTGACTGCA+AGG + chr8_1:6951859-6951878 Msa1175540:intron 40.0%
TCAATTATGGCTGACTGCAA+GGG + chr8_1:6951860-6951879 Msa1175540:intron 40.0%
ATGCCATGATTCAGTGGTAA+GGG + chr8_1:6951889-6951908 Msa1175540:intron 40.0%
AGTTTAGATGGTACTCTCTC+TGG - chr8_1:6952146-6952165 None:intergenic 40.0%
TACAATGGTGTGTGATGAAG+GGG + chr8_1:6952400-6952419 Msa1175540:CDS 40.0%
ATGTATGCAAGTACGAACCT+TGG + chr8_1:6952585-6952604 Msa1175540:CDS 40.0%
TGTATGCAAGTACGAACCTT+GGG + chr8_1:6952586-6952605 Msa1175540:CDS 40.0%
! TTTTTACCTGGTAAGTCCCA+AGG - chr8_1:6952605-6952624 None:intergenic 40.0%
!!! GGGTTTGTTTGGTTTTTACC+TGG - chr8_1:6952617-6952636 None:intergenic 40.0%
GGCACAAGAAAAACCATTCT+TGG - chr8_1:6952724-6952743 None:intergenic 40.0%
!! AATGGTTTTTGGAAAGCCAC+CGG + chr8_1:6952794-6952813 Msa1175540:CDS 40.0%
CTTAATGCTACGATCCTTTC+CGG - chr8_1:6952816-6952835 None:intergenic 40.0%
TACCATGAAAATCCTGTTCC+AGG + chr8_1:6952881-6952900 Msa1175540:CDS 40.0%
TTCCAGGTGTTAAGACCAAT+TGG + chr8_1:6952897-6952916 Msa1175540:CDS 40.0%
!! ATCCAATTGGTCTTAACACC+TGG - chr8_1:6952902-6952921 None:intergenic 40.0%
ACAAACCTGGTGATCATCAA+AGG - chr8_1:6952948-6952967 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr8_1:6953477-6953496 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr8_1:6953372-6953391 Msa1175540:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr8_1:6953477-6953496 Msa1175540:intron 40.0%
!!! TAACTTTGTGTTTTGGTGGG+TGG + chr8_1:6954362-6954381 Msa1175540:intron 40.0%
TTTAACCGAGCAACAACGTC+TGG + chr8_1:6951125-6951144 Msa1175540:CDS 45.0%
! GAGCAACAACGTCTGGATTT+TGG + chr8_1:6951132-6951151 Msa1175540:CDS 45.0%
AACTCCCTGTTAGGACCAAT+TGG + chr8_1:6951255-6951274 Msa1175540:CDS 45.0%
ACTCCCTGTTAGGACCAATT+GGG + chr8_1:6951256-6951275 Msa1175540:CDS 45.0%
TATGATCTATCACCTCAGGG+AGG - chr8_1:6951739-6951758 None:intergenic 45.0%
CATTCTCGCACGATTACGAT+TGG + chr8_1:6951782-6951801 Msa1175540:intron 45.0%
AGTCTGATGCCATGATTCAG+TGG + chr8_1:6951883-6951902 Msa1175540:intron 45.0%
GATGCCATGATTCAGTGGTA+AGG + chr8_1:6951888-6951907 Msa1175540:intron 45.0%
CATCCCTTACCACTGAATCA+TGG - chr8_1:6951895-6951914 None:intergenic 45.0%
TGCCGAGAAAAAAGGTGAAG+AGG + chr8_1:6952370-6952389 Msa1175540:CDS 45.0%
! AGAGGTTGTCATTTGTCTGG+TGG - chr8_1:6952432-6952451 None:intergenic 45.0%
!! AGGAAGCGTTGGAAGAAAAG+AGG - chr8_1:6952450-6952469 None:intergenic 45.0%
! TCCAACGCTTCCTTTTGTTC+TGG + chr8_1:6952457-6952476 Msa1175540:CDS 45.0%
! ACCAGAACAAAAGGAAGCGT+TGG - chr8_1:6952461-6952480 None:intergenic 45.0%
! ACGCTTCCTTTTGTTCTGGT+TGG + chr8_1:6952461-6952480 Msa1175540:CDS 45.0%
CTGAGTCCAACCAGAACAAA+AGG - chr8_1:6952470-6952489 None:intergenic 45.0%
!! TTTTTGGAAAGCCACCGGAA+AGG + chr8_1:6952799-6952818 Msa1175540:CDS 45.0%
! CACCTGGAACAGGATTTTCA+TGG - chr8_1:6952886-6952905 None:intergenic 45.0%
!! TTGGTCTTAACACCTGGAAC+AGG - chr8_1:6952896-6952915 None:intergenic 45.0%
AACCTGGTGATCATCAAAGG+TGG - chr8_1:6952945-6952964 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr8_1:6953476-6953495 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr8_1:6953476-6953495 Msa1175540:intron 45.0%
AGTATATCGTCCCGGTTGAT+AGG + chr8_1:6953821-6953840 Msa1175540:intron 45.0%
! GTATATCGTCCCGGTTGATA+GGG + chr8_1:6953822-6953841 Msa1175540:intron 45.0%
CACATATGTCCCTATCAACC+GGG - chr8_1:6953834-6953853 None:intergenic 45.0%
CCACATATGTCCCTATCAAC+CGG - chr8_1:6953835-6953854 None:intergenic 45.0%
AGGAATCAGGGTTAGAACTC+TGG - chr8_1:6953871-6953890 None:intergenic 45.0%
AATGTTATATGGGACAGGGG+CGG - chr8_1:6954108-6954127 None:intergenic 45.0%
!! GCTTCCTTTTTCATGGCTCA+AGG + chr8_1:6954211-6954230 Msa1175540:intron 45.0%
!! TTGGCCTTGAGCCATGAAAA+AGG - chr8_1:6954218-6954237 None:intergenic 45.0%
ACGCCTTCAGTTATACCGAT+TGG + chr8_1:6954249-6954268 Msa1175540:intron 45.0%
CCACCAATCGGTATAACTGA+AGG - chr8_1:6954255-6954274 None:intergenic 45.0%
! CCTTCAGTTATACCGATTGG+TGG + chr8_1:6954252-6954271 Msa1175540:intron 45.0%
! TCAGTTATACCGATTGGTGG+CGG + chr8_1:6954255-6954274 Msa1175540:intron 45.0%
!!! TATTTTCTTAAAAAAAAAAA+TGG + chr8_1:6952643-6952662 Msa1175540:intron 5.0%
!!! ACATTTTTTTTAAAATATTA+AGG - chr8_1:6954476-6954495 None:intergenic 5.0%
GGTCGGAATCTGAATCCAAC+AGG - chr8_1:6950834-6950853 None:intergenic 50.0%
! GGTTGTCATTTGTCTGGTGG+AGG - chr8_1:6952429-6952448 None:intergenic 50.0%
TACGAACCTTGGGACTTACC+AGG + chr8_1:6952596-6952615 Msa1175540:CDS 50.0%
AATGCTACGATCCTTTCCGG+TGG - chr8_1:6952813-6952832 None:intergenic 50.0%
! TGCCACCTTTGATGATCACC+AGG + chr8_1:6952940-6952959 Msa1175540:CDS 50.0%
!! CCGGTTGATAGGGACATATG+TGG + chr8_1:6953832-6953851 Msa1175540:intron 50.0%
TAAAGTGTGCCGCCACCAAT+CGG - chr8_1:6954267-6954286 None:intergenic 50.0%
AAGGTGGTTCATCTCGCACA+AGG - chr8_1:6954402-6954421 None:intergenic 50.0%
TGTGCGAGATGAACCACCTT+TGG + chr8_1:6954402-6954421 Msa1175540:intron 50.0%
GGGTTCGTCGCTCCTGATAT+AGG - chr8_1:6953099-6953118 None:intergenic 55.0%
! CTCCACGTTGGTGGGTGTGT+GGG - chr8_1:6954085-6954104 None:intergenic 60.0%
AGCCCACACACCCACCAACG+TGG + chr8_1:6954080-6954099 Msa1175540:intron 65.0%
! GCTCCACGTTGGTGGGTGTG+TGG - chr8_1:6954086-6954105 None:intergenic 65.0%
AGGGGCGGCTCCACGTTGGT+GGG - chr8_1:6954093-6954112 None:intergenic 70.0%
CAGGGGCGGCTCCACGTTGG+TGG - chr8_1:6954094-6954113 None:intergenic 75.0%
GGACAGGGGCGGCTCCACGT+TGG - chr8_1:6954097-6954116 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 6950795 6954695 6950795 ID=Msa1175540;Name=Msa1175540
chr8_1 mRNA 6950795 6954695 6950795 ID=Msa1175540-mRNA-1;Parent=Msa1175540;Name=Msa1175540-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.25|0|1|1|1|5|0|393
chr8_1 exon 6950795 6950972 6950795 ID=Msa1175540-mRNA-1:exon:2515;Parent=Msa1175540-mRNA-1
chr8_1 exon 6951045 6951325 6951045 ID=Msa1175540-mRNA-1:exon:2516;Parent=Msa1175540-mRNA-1
chr8_1 exon 6952338 6952617 6952338 ID=Msa1175540-mRNA-1:exon:2517;Parent=Msa1175540-mRNA-1
chr8_1 exon 6952696 6952961 6952696 ID=Msa1175540-mRNA-1:exon:2518;Parent=Msa1175540-mRNA-1
chr8_1 exon 6954519 6954695 6954519 ID=Msa1175540-mRNA-1:exon:2519;Parent=Msa1175540-mRNA-1
chr8_1 CDS 6950795 6950972 6950795 ID=Msa1175540-mRNA-1:cds;Parent=Msa1175540-mRNA-1
chr8_1 CDS 6951045 6951325 6951045 ID=Msa1175540-mRNA-1:cds;Parent=Msa1175540-mRNA-1
chr8_1 CDS 6952338 6952617 6952338 ID=Msa1175540-mRNA-1:cds;Parent=Msa1175540-mRNA-1
chr8_1 CDS 6952696 6952961 6952696 ID=Msa1175540-mRNA-1:cds;Parent=Msa1175540-mRNA-1
chr8_1 CDS 6954519 6954695 6954519 ID=Msa1175540-mRNA-1:cds;Parent=Msa1175540-mRNA-1
Gene Sequence

>Msa1175540

ATGGCAACATCATCTCCTCTCATTCTTGATTTTCTTCCTGTTGGATTCAGATTCCGACCAACAAATGAAGAACTAGTTAATCACTACCTCAAGAACAAGTTACTTGGTAATGAAGAGCTTGTGAACAATGTCATAGCCGAAGTTGATGTTTGCAGATTTGAACCATGGGAGTTACCATCTTGTTCGATAATAAAATCACATGATCCGGAATGGTTTTTCTTTTGTCCTTGTGATTACAAGTATGAAATGAGTAAAAAGTTTAACCGAGCAACAACGTCTGGATTTTGGAAAGCTACTGGAATTGAACATACTATTAAGATTAAGGGTACTCTCAAAGTTATTGCGACTAAGAAGATTCTTGTTTTCTATTTGAAAGCTACTGGAAATAAACTCCCTGTTAGGACCAATTGGGTTATACATGAGTATCATGATGCTGTCACCTTTGATGATGATAGACAGAGGACTCATGTCTTATGTCACTTGATTAAAAATGCCGAGAAAAAAGGTGAAGAGGAAAATTATACAATGGTGTGTGATGAAGGGGAGTCCTCCACCAGACAAATGACAACCTCTTTTCTTCCAACGCTTCCTTTTGTTCTGGTTGGACTCAGATTTTGTCCAACAGATGAAGAGCTTGTTAAACACTACCTTAAAAATAAGATACTTGGTAATGATTCCATTGCAAACAATGTTATAGCTGAAGTTGATGTATGCAAGTACGAACCTTGGGACTTACCAGCTTGTTCAATGATAAAATCTGATGACCAAGAATGGTTTTTCTTGTGCCCTATTGAATACAAGTATGCAAAGAGTAAAAGGTTTAAAAGGACAACTAATAATGGTTTTTGGAAAGCCACCGGAAAGGATCGTAGCATTAAGATTAGAGGTACCAATAAAGTTATTGGGATTAAGAAGACTCTTGTTTACCATGAAAATCCTGTTCCAGGTGTTAAGACCAATTGGATCATTCATGAGTATCATGATGCCACCTTTGATGATCACCAGAGGACTTTTGTATTATGTCGCTTGATGAAGAAAGCTGAGAAAAATATTGAAGAGGAACCGGATACAATGATATGTGATGAAGGGGAGTCGAGTAGACACATGAGTTCTGACTACGAAAATCAAGACACATTAGAAGGAATTTCAAATGTAAGAAGTTCATCCTTGATAGAAATTTAG
Protein sequence

>Msa1175540

MATSSPLILDFLPVGFRFRPTNEELVNHYLKNKLLGNEELVNNVIAEVDVCRFEPWELPSCSIIKSHDPEWFFFCPCDYKYEMSKKFNRATTSGFWKATGIEHTIKIKGTLKVIATKKILVFYLKATGNKLPVRTNWVIHEYHDAVTFDDDRQRTHVLCHLIKNAEKKGEEENYTMVCDEGESSTRQMTTSFLPTLPFVLVGLRFCPTDEELVKHYLKNKILGNDSIANNVIAEVDVCKYEPWDLPACSMIKSDDQEWFFLCPIEYKYAKSKRFKRTTNNGFWKATGKDRSIKIRGTNKVIGIKKTLVYHENPVPGVKTNWIIHEYHDATFDDHQRTFVLCRLMKKAEKNIEEEPDTMICDEGESSRHMSSDYENQDTLEGISNVRSSSLIEI*