Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176030 | XP_013444574.1 | 90.860 | 372 | 24 | 1 | 1 | 372 | 1 | 362 | 0.0 | 654 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176030 | sp|O23090|BH014_ARATH | 34.783 | 345 | 155 | 9 | 17 | 354 | 29 | 310 | 7.47e-51 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa1176030 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176030 | MtrunA17_Chr8g0346151 | 90.860 | 372 | 24 | 1 | 1 | 372 | 1 | 362 | 0.0 | 654 |
| Msa1176030 | MtrunA17_Chr8g0346161 | 81.016 | 374 | 56 | 6 | 13 | 381 | 16 | 379 | 0.0 | 602 |
| Msa1176030 | MtrunA17_Chr7g0260841 | 28.058 | 417 | 208 | 12 | 22 | 380 | 49 | 431 | 1.63e-34 | 133 |
| Msa1176030 | MtrunA17_Chr5g0411331 | 32.258 | 186 | 93 | 3 | 22 | 178 | 27 | 208 | 3.47e-30 | 116 |
| Msa1176030 | MtrunA17_Chr5g0411341 | 33.514 | 185 | 90 | 3 | 22 | 177 | 44 | 224 | 1.43e-29 | 120 |
| Msa1176030 | MtrunA17_Chr5g0411341 | 59.184 | 98 | 37 | 1 | 270 | 364 | 474 | 571 | 6.33e-28 | 115 |
| Msa1176030 | MtrunA17_Chr8g0366751 | 63.415 | 82 | 30 | 0 | 271 | 352 | 444 | 525 | 3.03e-28 | 116 |
| Msa1176030 | MtrunA17_Chr8g0366751 | 32.308 | 195 | 99 | 6 | 22 | 187 | 53 | 243 | 4.12e-26 | 110 |
| Msa1176030 | MtrunA17_Chr7g0275821 | 79.245 | 53 | 11 | 0 | 287 | 339 | 250 | 302 | 4.95e-22 | 97.1 |
| Msa1176030 | MtrunA17_Chr1g0185621 | 27.638 | 199 | 99 | 5 | 16 | 178 | 4 | 193 | 8.74e-19 | 88.2 |
| Msa1176030 | MtrunA17_Chr1g0185621 | 61.111 | 54 | 21 | 0 | 289 | 342 | 475 | 528 | 4.92e-15 | 76.6 |
| Msa1176030 | MtrunA17_Chr7g0252041 | 60.000 | 55 | 22 | 0 | 287 | 341 | 284 | 338 | 6.56e-14 | 72.8 |
| Msa1176030 | MtrunA17_Chr3g0131691 | 58.182 | 55 | 23 | 0 | 287 | 341 | 296 | 350 | 6.58e-14 | 72.8 |
| Msa1176030 | MtrunA17_Chr7g0225901 | 35.200 | 125 | 66 | 3 | 260 | 379 | 69 | 183 | 4.95e-13 | 68.6 |
| Msa1176030 | MtrunA17_Chr4g0049331 | 42.254 | 71 | 39 | 1 | 272 | 342 | 120 | 188 | 1.66e-12 | 67.8 |
| Msa1176030 | MtrunA17_Chr4g0002781 | 49.091 | 55 | 28 | 0 | 288 | 342 | 173 | 227 | 2.72e-12 | 67.4 |
| Msa1176030 | MtrunA17_Chr7g0270871 | 35.000 | 100 | 62 | 2 | 246 | 345 | 172 | 268 | 3.51e-12 | 67.4 |
| Msa1176030 | MtrunA17_Chr8g0386921 | 56.364 | 55 | 24 | 0 | 288 | 342 | 405 | 459 | 4.38e-12 | 67.4 |
| Msa1176030 | MtrunA17_Chr4g0054561 | 36.364 | 88 | 51 | 2 | 285 | 367 | 148 | 235 | 6.98e-12 | 65.9 |
| Msa1176030 | MtrunA17_Chr4g0033291 | 40.230 | 87 | 35 | 2 | 256 | 342 | 139 | 208 | 7.15e-12 | 65.9 |
| Msa1176030 | MtrunA17_Chr2g0298751 | 50.000 | 62 | 24 | 1 | 290 | 344 | 53 | 114 | 8.46e-12 | 64.7 |
| Msa1176030 | MtrunA17_Chr4g0054581 | 48.387 | 62 | 31 | 1 | 289 | 350 | 198 | 258 | 1.10e-11 | 65.9 |
| Msa1176030 | MtrunA17_Chr2g0280161 | 40.278 | 72 | 40 | 1 | 289 | 360 | 177 | 245 | 2.00e-11 | 64.7 |
| Msa1176030 | MtrunA17_Chr5g0400671 | 44.286 | 70 | 37 | 1 | 290 | 359 | 155 | 222 | 2.11e-11 | 64.7 |
| Msa1176030 | MtrunA17_Chr4g0002801 | 41.176 | 68 | 36 | 1 | 275 | 342 | 142 | 205 | 2.49e-11 | 64.3 |
| Msa1176030 | MtrunA17_Chr1g0211081 | 31.092 | 119 | 57 | 2 | 224 | 342 | 277 | 370 | 2.55e-11 | 65.1 |
| Msa1176030 | MtrunA17_Chr4g0054571 | 46.479 | 71 | 35 | 2 | 274 | 342 | 134 | 203 | 3.18e-11 | 63.9 |
| Msa1176030 | MtrunA17_Chr5g0400661 | 35.366 | 82 | 50 | 1 | 269 | 347 | 126 | 207 | 4.18e-11 | 63.5 |
| Msa1176030 | MtrunA17_Chr4g0028071 | 52.000 | 50 | 24 | 0 | 293 | 342 | 153 | 202 | 4.78e-11 | 63.5 |
| Msa1176030 | MtrunA17_Chr4g0033281 | 40.476 | 84 | 33 | 2 | 256 | 339 | 137 | 203 | 5.44e-11 | 63.2 |
| Msa1176030 | MtrunA17_Chr2g0320291 | 51.020 | 49 | 24 | 0 | 293 | 341 | 137 | 185 | 7.24e-11 | 62.8 |
| Msa1176030 | MtrunA17_Chr4g0033391 | 42.029 | 69 | 30 | 1 | 271 | 339 | 139 | 197 | 9.50e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1176030 | AT4G00870.1 | 34.783 | 345 | 155 | 9 | 17 | 354 | 29 | 310 | 7.59e-52 | 179 |
| Msa1176030 | AT5G46830.1 | 32.376 | 383 | 180 | 10 | 22 | 343 | 33 | 397 | 8.14e-44 | 159 |
| Msa1176030 | AT2G46510.1 | 30.935 | 417 | 190 | 14 | 22 | 347 | 47 | 456 | 4.77e-40 | 149 |
| Msa1176030 | AT4G16430.1 | 27.692 | 390 | 211 | 11 | 3 | 355 | 25 | 380 | 9.67e-34 | 130 |
| Msa1176030 | AT1G32640.1 | 31.579 | 190 | 93 | 3 | 22 | 178 | 67 | 252 | 5.39e-31 | 124 |
| Msa1176030 | AT1G32640.1 | 58.095 | 105 | 38 | 2 | 259 | 358 | 423 | 526 | 3.33e-29 | 119 |
| Msa1176030 | AT4G17880.1 | 30.208 | 192 | 94 | 3 | 23 | 178 | 63 | 250 | 8.96e-29 | 118 |
| Msa1176030 | AT4G17880.1 | 53.398 | 103 | 41 | 2 | 270 | 371 | 397 | 493 | 6.29e-27 | 112 |
| Msa1176030 | AT5G46760.1 | 53.571 | 112 | 46 | 1 | 240 | 351 | 366 | 471 | 3.34e-28 | 116 |
| Msa1176030 | AT5G46760.1 | 32.432 | 185 | 89 | 5 | 22 | 174 | 51 | 231 | 4.12e-27 | 113 |
| Msa1176030 | AT1G01260.1 | 65.333 | 75 | 26 | 0 | 273 | 347 | 417 | 491 | 3.61e-25 | 107 |
| Msa1176030 | AT1G01260.2 | 65.333 | 75 | 26 | 0 | 273 | 347 | 417 | 491 | 3.61e-25 | 107 |
| Msa1176030 | AT1G01260.3 | 65.333 | 75 | 26 | 0 | 273 | 347 | 417 | 491 | 3.61e-25 | 107 |
| Msa1176030 | AT4G00480.2 | 23.037 | 382 | 210 | 12 | 28 | 342 | 26 | 390 | 3.47e-18 | 86.7 |
| Msa1176030 | AT4G00480.3 | 23.037 | 382 | 210 | 12 | 28 | 342 | 26 | 390 | 4.32e-18 | 86.3 |
| Msa1176030 | AT4G00480.1 | 23.037 | 382 | 210 | 12 | 28 | 342 | 26 | 390 | 4.48e-18 | 86.3 |
| Msa1176030 | AT3G26744.6 | 60.000 | 55 | 22 | 0 | 287 | 341 | 305 | 359 | 1.24e-14 | 75.5 |
| Msa1176030 | AT3G26744.1 | 60.000 | 55 | 22 | 0 | 287 | 341 | 305 | 359 | 1.27e-14 | 75.5 |
| Msa1176030 | AT3G26744.4 | 60.000 | 55 | 22 | 0 | 287 | 341 | 305 | 359 | 1.27e-14 | 75.5 |
| Msa1176030 | AT3G26744.2 | 60.000 | 55 | 22 | 0 | 287 | 341 | 305 | 359 | 1.27e-14 | 75.5 |
| Msa1176030 | AT1G12860.2 | 60.000 | 55 | 22 | 0 | 287 | 341 | 265 | 319 | 2.14e-14 | 74.7 |
| Msa1176030 | AT1G12860.1 | 60.000 | 55 | 22 | 0 | 287 | 341 | 265 | 319 | 2.24e-14 | 74.7 |
| Msa1176030 | AT4G37850.2 | 34.532 | 139 | 75 | 4 | 245 | 369 | 99 | 235 | 1.61e-13 | 71.2 |
| Msa1176030 | AT4G37850.1 | 34.532 | 139 | 75 | 4 | 245 | 369 | 99 | 235 | 1.61e-13 | 71.2 |
| Msa1176030 | AT4G29930.5 | 62.222 | 45 | 17 | 0 | 290 | 334 | 55 | 99 | 1.33e-12 | 67.4 |
| Msa1176030 | AT4G29930.2 | 62.222 | 45 | 17 | 0 | 290 | 334 | 55 | 99 | 1.36e-12 | 67.0 |
| Msa1176030 | AT4G29930.6 | 62.222 | 45 | 17 | 0 | 290 | 334 | 55 | 99 | 1.39e-12 | 67.0 |
| Msa1176030 | AT4G09820.1 | 50.909 | 55 | 27 | 0 | 288 | 342 | 362 | 416 | 1.77e-12 | 68.9 |
| Msa1176030 | AT4G29930.4 | 63.636 | 44 | 16 | 0 | 291 | 334 | 56 | 99 | 2.22e-12 | 65.9 |
| Msa1176030 | AT4G29930.3 | 62.222 | 45 | 17 | 0 | 290 | 334 | 55 | 99 | 2.55e-12 | 67.0 |
| Msa1176030 | AT4G29930.7 | 62.222 | 45 | 17 | 0 | 290 | 334 | 55 | 99 | 2.55e-12 | 67.0 |
| Msa1176030 | AT4G29930.1 | 62.222 | 45 | 17 | 0 | 290 | 334 | 55 | 99 | 2.69e-12 | 66.6 |
| Msa1176030 | AT1G63650.3 | 39.726 | 73 | 41 | 1 | 289 | 358 | 405 | 477 | 3.50e-12 | 68.2 |
| Msa1176030 | AT1G63650.1 | 39.726 | 73 | 41 | 1 | 289 | 358 | 405 | 477 | 3.50e-12 | 68.2 |
| Msa1176030 | AT1G63650.2 | 39.726 | 73 | 41 | 1 | 289 | 358 | 405 | 477 | 3.50e-12 | 68.2 |
| Msa1176030 | AT5G57150.5 | 39.583 | 96 | 40 | 3 | 290 | 367 | 55 | 150 | 5.94e-12 | 65.1 |
| Msa1176030 | AT5G57150.3 | 39.583 | 96 | 40 | 3 | 290 | 367 | 56 | 151 | 6.37e-12 | 65.1 |
| Msa1176030 | AT5G57150.2 | 39.583 | 96 | 40 | 3 | 290 | 367 | 56 | 151 | 6.85e-12 | 65.1 |
| Msa1176030 | AT5G57150.1 | 39.583 | 96 | 40 | 3 | 290 | 367 | 55 | 150 | 7.78e-12 | 65.5 |
| Msa1176030 | AT5G57150.4 | 39.583 | 96 | 40 | 3 | 290 | 367 | 56 | 151 | 1.39e-11 | 64.7 |
| Msa1176030 | AT2G16910.1 | 54.000 | 50 | 23 | 0 | 293 | 342 | 318 | 367 | 1.45e-11 | 66.2 |
Find 59 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATTGAAGATTTAAAATT+AGG | 0.097958 | 8_1:+7709927 | Msa1176030:CDS |
| CTTCTCATGGGTGGCTTCTT+TGG | 0.173047 | 8_1:-7709577 | None:intergenic |
| TCCAAACCCAATCCGAAAAT+TGG | 0.228757 | 8_1:+7709010 | Msa1176030:CDS |
| TTGCTTTAGATTCTGTTCTT+TGG | 0.229970 | 8_1:+7709256 | Msa1176030:CDS |
| AAGGTAAACCTTTCTTATCT+TGG | 0.238310 | 8_1:+7709070 | Msa1176030:CDS |
| ATGACAACATACAACAAAAT+TGG | 0.240197 | 8_1:+7709400 | Msa1176030:CDS |
| GTTTGAAGTTGTTGTTTCTT+TGG | 0.252021 | 8_1:-7709115 | None:intergenic |
| GCCAACATGGGTGCCGTCTC+TGG | 0.291810 | 8_1:+7709546 | Msa1176030:CDS |
| AGGTAAACCTTTCTTATCTT+GGG | 0.292720 | 8_1:+7709071 | Msa1176030:CDS |
| AACTAACGGTGTAATTGAAA+TGG | 0.297656 | 8_1:+7709371 | Msa1176030:CDS |
| ATCTTAAAGCATAGAATCTA+TGG | 0.304209 | 8_1:-7709824 | None:intergenic |
| AGATTGAAGATTTAAAATTA+GGG | 0.310294 | 8_1:+7709928 | Msa1176030:CDS |
| ATCTAAAGCAAAAGCTTTAC+CGG | 0.323817 | 8_1:-7709244 | None:intergenic |
| TTATCCATCTTTGAAACGTT+TGG | 0.324231 | 8_1:-7709855 | None:intergenic |
| TTGATTCTGAGGAGGATGTT+TGG | 0.339396 | 8_1:-7709452 | None:intergenic |
| GGATGTTTGGAACATAGATT+TGG | 0.360854 | 8_1:-7709439 | None:intergenic |
| CCTAAGTAGGGACGTTAAAA+AGG | 0.362669 | 8_1:-7711255 | None:intergenic |
| TTGTTGTTTCTTTGGTTCCT+TGG | 0.363175 | 8_1:-7709107 | None:intergenic |
| TCCATGCATGTGTGCTTCAT+TGG | 0.364769 | 8_1:-7709322 | None:intergenic |
| TGTTGAAGGGTTGGTGTTTG+TGG | 0.365685 | 8_1:-7708970 | None:intergenic |
| TGTTGGCAAAAGATGTGTTT+TGG | 0.367022 | 8_1:-7709530 | None:intergenic |
| AGGGTTGGTGTTTGTGGTGA+AGG | 0.385693 | 8_1:-7708964 | None:intergenic |
| TTTATCTCTCCTTTGTCTCT+CGG | 0.386285 | 8_1:-7709796 | None:intergenic |
| TCAATTACACCGTTAGTTGT+AGG | 0.388592 | 8_1:-7709366 | None:intergenic |
| ATGGGTGGCTTCTTTGGCGC+TGG | 0.396457 | 8_1:-7709571 | None:intergenic |
| CAAACAACAAAAGATGAAAA+AGG | 0.404302 | 8_1:+7709051 | Msa1176030:CDS |
| GGTTCCAAACGTTTCAAAGA+TGG | 0.424360 | 8_1:+7709851 | Msa1176030:CDS |
| ACATTTGTCAAGTGGGGTGG+TGG | 0.427015 | 8_1:-7709496 | None:intergenic |
| GGGTTGGTGTTTGTGGTGAA+GGG | 0.433509 | 8_1:-7708963 | None:intergenic |
| CCTTTCTTATCTTGGGGTGA+AGG | 0.446476 | 8_1:+7709078 | Msa1176030:CDS |
| GAGATAATGAAATCTTTCAT+AGG | 0.448427 | 8_1:-7708916 | None:intergenic |
| TTTAAAATTAGGGCAACAAA+AGG | 0.456499 | 8_1:+7709938 | Msa1176030:CDS |
| ACTAACGGTGTAATTGAAAT+GGG | 0.469843 | 8_1:+7709372 | Msa1176030:CDS |
| AAAAGAGAACCGAAGAAAAG+AGG | 0.478932 | 8_1:+7709726 | Msa1176030:CDS |
| TCGGCTTCCACATGGTTCAT+CGG | 0.486588 | 8_1:-7709777 | None:intergenic |
| TTTGGAACATAGATTTGGCT+TGG | 0.488416 | 8_1:-7709434 | None:intergenic |
| CCTTCACCCCAAGATAAGAA+AGG | 0.497048 | 8_1:-7709078 | None:intergenic |
| TAAATTTGAGTTTGATTCTG+AGG | 0.509911 | 8_1:-7709463 | None:intergenic |
| GTACAAACGGCGATGCTGAA+TGG | 0.521203 | 8_1:+7709160 | Msa1176030:CDS |
| ATTCTATGCTTTAAGATCTG+TGG | 0.527981 | 8_1:+7709830 | Msa1176030:CDS |
| TTTGGCGCTGGCGCCAGAGA+CGG | 0.531935 | 8_1:-7709559 | None:intergenic |
| AATTGAAGAAGCATTACCTA+TGG | 0.532558 | 8_1:-7709214 | None:intergenic |
| GGTAAACCTTTCTTATCTTG+GGG | 0.537701 | 8_1:+7709072 | Msa1176030:CDS |
| GCCAGAGACGGCACCCATGT+TGG | 0.539783 | 8_1:-7709547 | None:intergenic |
| TTCTTTGTTATCAGATGCAG+TGG | 0.539939 | 8_1:+7709881 | Msa1176030:CDS |
| GATAGTAACACATGTACAAA+CGG | 0.547982 | 8_1:+7709147 | Msa1176030:CDS |
| TTTGTCTCTCGGCTTCCACA+TGG | 0.548386 | 8_1:-7709785 | None:intergenic |
| TCCAATGAAGCACACATGCA+TGG | 0.551566 | 8_1:+7709321 | Msa1176030:CDS |
| GCTTCTTCAATTTCATTACC+CGG | 0.556623 | 8_1:+7709225 | Msa1176030:CDS |
| ATGTGGAAGCCGAGAGACAA+AGG | 0.579932 | 8_1:+7709787 | Msa1176030:CDS |
| TGGGGTGAAGGCTATTTCCA+AGG | 0.580662 | 8_1:+7709090 | Msa1176030:CDS |
| GGTGTTTGAATTCGTGTCAA+CGG | 0.584364 | 8_1:-7709756 | None:intergenic |
| ATTTGAGTTTGATTCTGAGG+AGG | 0.594452 | 8_1:-7709460 | None:intergenic |
| ATTTGTATACCTACAACTAA+CGG | 0.599891 | 8_1:+7709357 | Msa1176030:CDS |
| TTTACATTTGTCAAGTGGGG+TGG | 0.601476 | 8_1:-7709499 | None:intergenic |
| TAGATTTGGCTTGGTATACG+AGG | 0.640872 | 8_1:-7709425 | None:intergenic |
| TCTAAAGCAAAAGCTTTACC+GGG | 0.640910 | 8_1:-7709243 | None:intergenic |
| TGCAACGACAACTTCAATCG+TGG | 0.678130 | 8_1:+7710010 | Msa1176030:CDS |
| TCAAACACCGATGAACCATG+TGG | 0.723026 | 8_1:+7709770 | Msa1176030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGATTGAAGATTTAAAATT+AGG | + | chr8_1:7709927-7709946 | Msa1176030:CDS | 15.0% |
| !!! | AGATTGAAGATTTAAAATTA+GGG | + | chr8_1:7709928-7709947 | Msa1176030:CDS | 15.0% |
| !! | NNNNNNNNNTTACTACAACT+AGG | - | chr8_1:7710050-7710069 | None:intergenic | 15.0% |
| !!! | ATTTTGTCATATATTTTTGT+AGG | - | chr8_1:7710301-7710320 | None:intergenic | 15.0% |
| !! | GTGTTGAAATAATTATTATT+GGG | - | chr8_1:7710662-7710681 | None:intergenic | 15.0% |
| !!! | TTTGATAATTTTTGGAATTT+TGG | - | chr8_1:7710715-7710734 | None:intergenic | 15.0% |
| !!! | ATTTGGATTTTGATAATTTT+TGG | - | chr8_1:7710723-7710742 | None:intergenic | 15.0% |
| !!! | AAGATTGAAGATTTAAAATT+AGG | + | chr8_1:7709927-7709946 | Msa1176030:CDS | 15.0% |
| !!! | AGATTGAAGATTTAAAATTA+GGG | + | chr8_1:7709928-7709947 | Msa1176030:CDS | 15.0% |
| !! | NNNNNNNNNTTACTACAACT+AGG | - | chr8_1:7710050-7710069 | None:intergenic | 15.0% |
| !!! | ATTTTGTCATATATTTTTGT+AGG | - | chr8_1:7710301-7710320 | None:intergenic | 15.0% |
| !! | GTGTTGAAATAATTATTATT+GGG | - | chr8_1:7710662-7710681 | None:intergenic | 15.0% |
| !!! | TTTGATAATTTTTGGAATTT+TGG | - | chr8_1:7710715-7710734 | None:intergenic | 15.0% |
| !!! | ATTTGGATTTTGATAATTTT+TGG | - | chr8_1:7710723-7710742 | None:intergenic | 15.0% |
| !! | GATTATTCAATCAAAGATTT+GGG | - | chr8_1:7710370-7710389 | None:intergenic | 20.0% |
| !! | TTTCACTAAAAAGAAGATTT+GGG | - | chr8_1:7710634-7710653 | None:intergenic | 20.0% |
| !! | ATTTCACTAAAAAGAAGATT+TGG | - | chr8_1:7710635-7710654 | None:intergenic | 20.0% |
| !!! | GGTGTTGAAATAATTATTAT+TGG | - | chr8_1:7710663-7710682 | None:intergenic | 20.0% |
| !! | TGGGTAATTAGAAAAATTAT+GGG | - | chr8_1:7710684-7710703 | None:intergenic | 20.0% |
| !! | ATGGGTAATTAGAAAAATTA+TGG | - | chr8_1:7710685-7710704 | None:intergenic | 20.0% |
| !! | TAAGAATACGAAATAAAAAG+TGG | + | chr8_1:7711001-7711020 | Msa1176030:intron | 20.0% |
| !! | TGAATGAGTATTCAATTATT+AGG | + | chr8_1:7711068-7711087 | Msa1176030:intron | 20.0% |
| !!! | AGTTTTTTAACCATTGTAAA+TGG | + | chr8_1:7711142-7711161 | Msa1176030:intron | 20.0% |
| !! | ATTTATAAGACCATTTACAA+TGG | - | chr8_1:7711155-7711174 | None:intergenic | 20.0% |
| !! | GATTATTCAATCAAAGATTT+GGG | - | chr8_1:7710370-7710389 | None:intergenic | 20.0% |
| !! | TTTCACTAAAAAGAAGATTT+GGG | - | chr8_1:7710634-7710653 | None:intergenic | 20.0% |
| !! | ATTTCACTAAAAAGAAGATT+TGG | - | chr8_1:7710635-7710654 | None:intergenic | 20.0% |
| !!! | GGTGTTGAAATAATTATTAT+TGG | - | chr8_1:7710663-7710682 | None:intergenic | 20.0% |
| !! | TGGGTAATTAGAAAAATTAT+GGG | - | chr8_1:7710684-7710703 | None:intergenic | 20.0% |
| !! | ATGGGTAATTAGAAAAATTA+TGG | - | chr8_1:7710685-7710704 | None:intergenic | 20.0% |
| !! | TAAGAATACGAAATAAAAAG+TGG | + | chr8_1:7711001-7711020 | Msa1176030:intron | 20.0% |
| !! | TGAATGAGTATTCAATTATT+AGG | + | chr8_1:7711068-7711087 | Msa1176030:intron | 20.0% |
| !!! | AGTTTTTTAACCATTGTAAA+TGG | + | chr8_1:7711142-7711161 | Msa1176030:intron | 20.0% |
| !! | ATTTATAAGACCATTTACAA+TGG | - | chr8_1:7711155-7711174 | None:intergenic | 20.0% |
| !!! | AATTTGAAGCTTTTGTTGAA+GGG | - | chr8_1:7708986-7709005 | None:intergenic | 25.0% |
| !!! | AAATTTGAAGCTTTTGTTGA+AGG | - | chr8_1:7708987-7709006 | None:intergenic | 25.0% |
| ! | CAAACAACAAAAGATGAAAA+AGG | + | chr8_1:7709051-7709070 | Msa1176030:CDS | 25.0% |
| ! | ATTTGTATACCTACAACTAA+CGG | + | chr8_1:7709357-7709376 | Msa1176030:CDS | 25.0% |
| ! | ATGACAACATACAACAAAAT+TGG | + | chr8_1:7709400-7709419 | Msa1176030:CDS | 25.0% |
| !! | TAAATTTGAGTTTGATTCTG+AGG | - | chr8_1:7709466-7709485 | None:intergenic | 25.0% |
| !! | ATGTTTTACATTTGTCAAGT+GGG | - | chr8_1:7709506-7709525 | None:intergenic | 25.0% |
| !! | AATGTTTTACATTTGTCAAG+TGG | - | chr8_1:7709507-7709526 | None:intergenic | 25.0% |
| !!! | CAATTTTTTTTGCTTCTCAT+GGG | - | chr8_1:7709592-7709611 | None:intergenic | 25.0% |
| ! | ATCTTAAAGCATAGAATCTA+TGG | - | chr8_1:7709827-7709846 | None:intergenic | 25.0% |
| !! | TTTAAAATTAGGGCAACAAA+AGG | + | chr8_1:7709938-7709957 | Msa1176030:CDS | 25.0% |
| ! | TCCAAGTTAATAGCATATAA+CGG | + | chr8_1:7710268-7710287 | Msa1176030:intron | 25.0% |
| ! | TATGACAAAATTAAAGTGAC+CGG | + | chr8_1:7710310-7710329 | Msa1176030:intron | 25.0% |
| ! | CGATTATTCAATCAAAGATT+TGG | - | chr8_1:7710371-7710390 | None:intergenic | 25.0% |
| ! | AATACGAAATAAAAAGTGGT+GGG | + | chr8_1:7711005-7711024 | Msa1176030:intron | 25.0% |
| ! | ATGAGTATTCAATTATTAGG+TGG | + | chr8_1:7711071-7711090 | Msa1176030:intron | 25.0% |
| !!! | AATTTGAAGCTTTTGTTGAA+GGG | - | chr8_1:7708986-7709005 | None:intergenic | 25.0% |
| !!! | AAATTTGAAGCTTTTGTTGA+AGG | - | chr8_1:7708987-7709006 | None:intergenic | 25.0% |
| ! | CAAACAACAAAAGATGAAAA+AGG | + | chr8_1:7709051-7709070 | Msa1176030:CDS | 25.0% |
| ! | ATTTGTATACCTACAACTAA+CGG | + | chr8_1:7709357-7709376 | Msa1176030:CDS | 25.0% |
| ! | ATGACAACATACAACAAAAT+TGG | + | chr8_1:7709400-7709419 | Msa1176030:CDS | 25.0% |
| !! | TAAATTTGAGTTTGATTCTG+AGG | - | chr8_1:7709466-7709485 | None:intergenic | 25.0% |
| !! | ATGTTTTACATTTGTCAAGT+GGG | - | chr8_1:7709506-7709525 | None:intergenic | 25.0% |
| !! | AATGTTTTACATTTGTCAAG+TGG | - | chr8_1:7709507-7709526 | None:intergenic | 25.0% |
| !!! | CAATTTTTTTTGCTTCTCAT+GGG | - | chr8_1:7709592-7709611 | None:intergenic | 25.0% |
| ! | ATCTTAAAGCATAGAATCTA+TGG | - | chr8_1:7709827-7709846 | None:intergenic | 25.0% |
| !! | TTTAAAATTAGGGCAACAAA+AGG | + | chr8_1:7709938-7709957 | Msa1176030:CDS | 25.0% |
| ! | TCCAAGTTAATAGCATATAA+CGG | + | chr8_1:7710268-7710287 | Msa1176030:intron | 25.0% |
| ! | TATGACAAAATTAAAGTGAC+CGG | + | chr8_1:7710310-7710329 | Msa1176030:intron | 25.0% |
| ! | CGATTATTCAATCAAAGATT+TGG | - | chr8_1:7710371-7710390 | None:intergenic | 25.0% |
| ! | AATACGAAATAAAAAGTGGT+GGG | + | chr8_1:7711005-7711024 | Msa1176030:intron | 25.0% |
| ! | ATGAGTATTCAATTATTAGG+TGG | + | chr8_1:7711071-7711090 | Msa1176030:intron | 25.0% |
| ! | TTTTCATGAGAAGATGAAGA+TGG | - | chr8_1:7708943-7708962 | None:intergenic | 30.0% |
| ! | ATAGATCCAATTTTCGGATT+GGG | - | chr8_1:7709019-7709038 | None:intergenic | 30.0% |
| ! | AATGGCATAGATCCAATTTT+CGG | - | chr8_1:7709025-7709044 | None:intergenic | 30.0% |
| !!! | TTTTGTTGTTTGCCACAAAA+TGG | - | chr8_1:7709043-7709062 | None:intergenic | 30.0% |
| AAGGTAAACCTTTCTTATCT+TGG | + | chr8_1:7709070-7709089 | Msa1176030:CDS | 30.0% | |
| AGGTAAACCTTTCTTATCTT+GGG | + | chr8_1:7709071-7709090 | Msa1176030:CDS | 30.0% | |
| !! | GTTTGAAGTTGTTGTTTCTT+TGG | - | chr8_1:7709118-7709137 | None:intergenic | 30.0% |
| GATAGTAACACATGTACAAA+CGG | + | chr8_1:7709147-7709166 | Msa1176030:CDS | 30.0% | |
| ! | ATGACTCGAAATTTTTCCAT+AGG | + | chr8_1:7709198-7709217 | Msa1176030:CDS | 30.0% |
| !! | AATTGAAGAAGCATTACCTA+TGG | - | chr8_1:7709217-7709236 | None:intergenic | 30.0% |
| ! | ATCTAAAGCAAAAGCTTTAC+CGG | - | chr8_1:7709247-7709266 | None:intergenic | 30.0% |
| ! | TTGCTTTAGATTCTGTTCTT+TGG | + | chr8_1:7709256-7709275 | Msa1176030:CDS | 30.0% |
| AACTAACGGTGTAATTGAAA+TGG | + | chr8_1:7709371-7709390 | Msa1176030:CDS | 30.0% | |
| ACTAACGGTGTAATTGAAAT+GGG | + | chr8_1:7709372-7709391 | Msa1176030:CDS | 30.0% | |
| ! | TGTTTTACATTTGTCAAGTG+GGG | - | chr8_1:7709505-7709524 | None:intergenic | 30.0% |
| !!! | GCAATTTTTTTTGCTTCTCA+TGG | - | chr8_1:7709593-7709612 | None:intergenic | 30.0% |
| !!! | GTTGTTTTTGTTGCTAATAG+TGG | - | chr8_1:7709681-7709700 | None:intergenic | 30.0% |
| !! | ATTCTATGCTTTAAGATCTG+TGG | + | chr8_1:7709830-7709849 | Msa1176030:CDS | 30.0% |
| !! | TTATCCATCTTTGAAACGTT+TGG | - | chr8_1:7709858-7709877 | None:intergenic | 30.0% |
| !! | TACTACAACTAGGTTTGTTT+TGG | - | chr8_1:7710040-7710059 | None:intergenic | 30.0% |
| !! | TTCATCCTTTACGTTTTTAG+CGG | - | chr8_1:7710227-7710246 | None:intergenic | 30.0% |
| ATAGAGATAAAAAGATGACG+AGG | + | chr8_1:7710541-7710560 | Msa1176030:intron | 30.0% | |
| TAGAGATAAAAAGATGACGA+GGG | + | chr8_1:7710542-7710561 | Msa1176030:intron | 30.0% | |
| !! | TGGAATTTTGGTAGCTAAAT+GGG | - | chr8_1:7710703-7710722 | None:intergenic | 30.0% |
| !! | TTGGAATTTTGGTAGCTAAA+TGG | - | chr8_1:7710704-7710723 | None:intergenic | 30.0% |
| GCAACACAACAAAATTGATT+TGG | - | chr8_1:7710740-7710759 | None:intergenic | 30.0% | |
| GAATACGAAATAAAAAGTGG+TGG | + | chr8_1:7711004-7711023 | Msa1176030:intron | 30.0% | |
| ATACGAAATAAAAAGTGGTG+GGG | + | chr8_1:7711006-7711025 | Msa1176030:intron | 30.0% | |
| ! | TCAACTTTTACACTCTCAAA+TGG | - | chr8_1:7711051-7711070 | None:intergenic | 30.0% |
| GTGTTGAGAATTGAAAAAGT+AGG | + | chr8_1:7711114-7711133 | Msa1176030:intron | 30.0% | |
| ! | TTTTCATGAGAAGATGAAGA+TGG | - | chr8_1:7708943-7708962 | None:intergenic | 30.0% |
| ! | ATAGATCCAATTTTCGGATT+GGG | - | chr8_1:7709019-7709038 | None:intergenic | 30.0% |
| ! | AATGGCATAGATCCAATTTT+CGG | - | chr8_1:7709025-7709044 | None:intergenic | 30.0% |
| !!! | TTTTGTTGTTTGCCACAAAA+TGG | - | chr8_1:7709043-7709062 | None:intergenic | 30.0% |
| AAGGTAAACCTTTCTTATCT+TGG | + | chr8_1:7709070-7709089 | Msa1176030:CDS | 30.0% | |
| AGGTAAACCTTTCTTATCTT+GGG | + | chr8_1:7709071-7709090 | Msa1176030:CDS | 30.0% | |
| !! | GTTTGAAGTTGTTGTTTCTT+TGG | - | chr8_1:7709118-7709137 | None:intergenic | 30.0% |
| GATAGTAACACATGTACAAA+CGG | + | chr8_1:7709147-7709166 | Msa1176030:CDS | 30.0% | |
| ! | ATGACTCGAAATTTTTCCAT+AGG | + | chr8_1:7709198-7709217 | Msa1176030:CDS | 30.0% |
| !! | AATTGAAGAAGCATTACCTA+TGG | - | chr8_1:7709217-7709236 | None:intergenic | 30.0% |
| ! | ATCTAAAGCAAAAGCTTTAC+CGG | - | chr8_1:7709247-7709266 | None:intergenic | 30.0% |
| ! | TTGCTTTAGATTCTGTTCTT+TGG | + | chr8_1:7709256-7709275 | Msa1176030:CDS | 30.0% |
| AACTAACGGTGTAATTGAAA+TGG | + | chr8_1:7709371-7709390 | Msa1176030:CDS | 30.0% | |
| ACTAACGGTGTAATTGAAAT+GGG | + | chr8_1:7709372-7709391 | Msa1176030:CDS | 30.0% | |
| ! | TGTTTTACATTTGTCAAGTG+GGG | - | chr8_1:7709505-7709524 | None:intergenic | 30.0% |
| !!! | GCAATTTTTTTTGCTTCTCA+TGG | - | chr8_1:7709593-7709612 | None:intergenic | 30.0% |
| !!! | GTTGTTTTTGTTGCTAATAG+TGG | - | chr8_1:7709681-7709700 | None:intergenic | 30.0% |
| !! | ATTCTATGCTTTAAGATCTG+TGG | + | chr8_1:7709830-7709849 | Msa1176030:CDS | 30.0% |
| !! | TTATCCATCTTTGAAACGTT+TGG | - | chr8_1:7709858-7709877 | None:intergenic | 30.0% |
| !! | TACTACAACTAGGTTTGTTT+TGG | - | chr8_1:7710040-7710059 | None:intergenic | 30.0% |
| !! | TTCATCCTTTACGTTTTTAG+CGG | - | chr8_1:7710227-7710246 | None:intergenic | 30.0% |
| ATAGAGATAAAAAGATGACG+AGG | + | chr8_1:7710541-7710560 | Msa1176030:intron | 30.0% | |
| TAGAGATAAAAAGATGACGA+GGG | + | chr8_1:7710542-7710561 | Msa1176030:intron | 30.0% | |
| !! | TGGAATTTTGGTAGCTAAAT+GGG | - | chr8_1:7710703-7710722 | None:intergenic | 30.0% |
| !! | TTGGAATTTTGGTAGCTAAA+TGG | - | chr8_1:7710704-7710723 | None:intergenic | 30.0% |
| GCAACACAACAAAATTGATT+TGG | - | chr8_1:7710740-7710759 | None:intergenic | 30.0% | |
| GAATACGAAATAAAAAGTGG+TGG | + | chr8_1:7711004-7711023 | Msa1176030:intron | 30.0% | |
| ATACGAAATAAAAAGTGGTG+GGG | + | chr8_1:7711006-7711025 | Msa1176030:intron | 30.0% | |
| ! | TCAACTTTTACACTCTCAAA+TGG | - | chr8_1:7711051-7711070 | None:intergenic | 30.0% |
| GTGTTGAGAATTGAAAAAGT+AGG | + | chr8_1:7711114-7711133 | Msa1176030:intron | 30.0% | |
| ! | CATAGATCCAATTTTCGGAT+TGG | - | chr8_1:7709020-7709039 | None:intergenic | 35.0% |
| !!! | ATTGGATCTATGCCATTTTG+TGG | + | chr8_1:7709028-7709047 | Msa1176030:CDS | 35.0% |
| GGTAAACCTTTCTTATCTTG+GGG | + | chr8_1:7709072-7709091 | Msa1176030:CDS | 35.0% | |
| !! | TTGTTGTTTCTTTGGTTCCT+TGG | - | chr8_1:7709110-7709129 | None:intergenic | 35.0% |
| GCTTCTTCAATTTCATTACC+CGG | + | chr8_1:7709225-7709244 | Msa1176030:CDS | 35.0% | |
| ! | TCTAAAGCAAAAGCTTTACC+GGG | - | chr8_1:7709246-7709265 | None:intergenic | 35.0% |
| TCAATTACACCGTTAGTTGT+AGG | - | chr8_1:7709369-7709388 | None:intergenic | 35.0% | |
| ! | TTTGGAACATAGATTTGGCT+TGG | - | chr8_1:7709437-7709456 | None:intergenic | 35.0% |
| ! | GGATGTTTGGAACATAGATT+TGG | - | chr8_1:7709442-7709461 | None:intergenic | 35.0% |
| ! | ATTTGAGTTTGATTCTGAGG+AGG | - | chr8_1:7709463-7709482 | None:intergenic | 35.0% |
| ! | TGTTGGCAAAAGATGTGTTT+TGG | - | chr8_1:7709533-7709552 | None:intergenic | 35.0% |
| ! | AAACACATCTTTTGCCAACA+TGG | + | chr8_1:7709533-7709552 | Msa1176030:CDS | 35.0% |
| ! | AACACATCTTTTGCCAACAT+GGG | + | chr8_1:7709534-7709553 | Msa1176030:CDS | 35.0% |
| !!! | TTTTTTTTGCTTCTCATGGG+TGG | - | chr8_1:7709589-7709608 | None:intergenic | 35.0% |
| AAAAGAGAACCGAAGAAAAG+AGG | + | chr8_1:7709726-7709745 | Msa1176030:CDS | 35.0% | |
| ! | GGTTTTCTTCCTCTTTTCTT+CGG | - | chr8_1:7709738-7709757 | None:intergenic | 35.0% |
| TTTATCTCTCCTTTGTCTCT+CGG | - | chr8_1:7709799-7709818 | None:intergenic | 35.0% | |
| ! | TTCTTTGTTATCAGATGCAG+TGG | + | chr8_1:7709881-7709900 | Msa1176030:CDS | 35.0% |
| GCCGTTATATGCTATTAACT+TGG | - | chr8_1:7710272-7710291 | None:intergenic | 35.0% | |
| TAAAGTGACCGGAATATTCA+TGG | + | chr8_1:7710321-7710340 | Msa1176030:intron | 35.0% | |
| AGAGATAAAAAGATGACGAG+GGG | + | chr8_1:7710543-7710562 | Msa1176030:intron | 35.0% | |
| ACATCTTAATGCCCCTATTT+AGG | + | chr8_1:7711206-7711225 | Msa1176030:intron | 35.0% | |
| CAAGTTTGTGACCTAAATAG+GGG | - | chr8_1:7711220-7711239 | None:intergenic | 35.0% | |
| GCAAGTTTGTGACCTAAATA+GGG | - | chr8_1:7711221-7711240 | None:intergenic | 35.0% | |
| ! | CATAGATCCAATTTTCGGAT+TGG | - | chr8_1:7709020-7709039 | None:intergenic | 35.0% |
| !!! | ATTGGATCTATGCCATTTTG+TGG | + | chr8_1:7709028-7709047 | Msa1176030:CDS | 35.0% |
| GGTAAACCTTTCTTATCTTG+GGG | + | chr8_1:7709072-7709091 | Msa1176030:CDS | 35.0% | |
| !! | TTGTTGTTTCTTTGGTTCCT+TGG | - | chr8_1:7709110-7709129 | None:intergenic | 35.0% |
| GCTTCTTCAATTTCATTACC+CGG | + | chr8_1:7709225-7709244 | Msa1176030:CDS | 35.0% | |
| ! | TCTAAAGCAAAAGCTTTACC+GGG | - | chr8_1:7709246-7709265 | None:intergenic | 35.0% |
| TCAATTACACCGTTAGTTGT+AGG | - | chr8_1:7709369-7709388 | None:intergenic | 35.0% | |
| ! | TTTGGAACATAGATTTGGCT+TGG | - | chr8_1:7709437-7709456 | None:intergenic | 35.0% |
| ! | GGATGTTTGGAACATAGATT+TGG | - | chr8_1:7709442-7709461 | None:intergenic | 35.0% |
| ! | ATTTGAGTTTGATTCTGAGG+AGG | - | chr8_1:7709463-7709482 | None:intergenic | 35.0% |
| ! | TGTTGGCAAAAGATGTGTTT+TGG | - | chr8_1:7709533-7709552 | None:intergenic | 35.0% |
| ! | AAACACATCTTTTGCCAACA+TGG | + | chr8_1:7709533-7709552 | Msa1176030:CDS | 35.0% |
| ! | AACACATCTTTTGCCAACAT+GGG | + | chr8_1:7709534-7709553 | Msa1176030:CDS | 35.0% |
| !!! | TTTTTTTTGCTTCTCATGGG+TGG | - | chr8_1:7709589-7709608 | None:intergenic | 35.0% |
| AAAAGAGAACCGAAGAAAAG+AGG | + | chr8_1:7709726-7709745 | Msa1176030:CDS | 35.0% | |
| ! | GGTTTTCTTCCTCTTTTCTT+CGG | - | chr8_1:7709738-7709757 | None:intergenic | 35.0% |
| TTTATCTCTCCTTTGTCTCT+CGG | - | chr8_1:7709799-7709818 | None:intergenic | 35.0% | |
| ! | TTCTTTGTTATCAGATGCAG+TGG | + | chr8_1:7709881-7709900 | Msa1176030:CDS | 35.0% |
| GCCGTTATATGCTATTAACT+TGG | - | chr8_1:7710272-7710291 | None:intergenic | 35.0% | |
| TAAAGTGACCGGAATATTCA+TGG | + | chr8_1:7710321-7710340 | Msa1176030:intron | 35.0% | |
| AGAGATAAAAAGATGACGAG+GGG | + | chr8_1:7710543-7710562 | Msa1176030:intron | 35.0% | |
| ACATCTTAATGCCCCTATTT+AGG | + | chr8_1:7711206-7711225 | Msa1176030:intron | 35.0% | |
| CAAGTTTGTGACCTAAATAG+GGG | - | chr8_1:7711220-7711239 | None:intergenic | 35.0% | |
| GCAAGTTTGTGACCTAAATA+GGG | - | chr8_1:7711221-7711240 | None:intergenic | 35.0% | |
| ! | TGAAGCTTTTGTTGAAGGGT+TGG | - | chr8_1:7708982-7709001 | None:intergenic | 40.0% |
| TCCAAACCCAATCCGAAAAT+TGG | + | chr8_1:7709010-7709029 | Msa1176030:CDS | 40.0% | |
| !! | TCCAATTTTCGGATTGGGTT+TGG | - | chr8_1:7709014-7709033 | None:intergenic | 40.0% |
| !! | TAGATTTGGCTTGGTATACG+AGG | - | chr8_1:7709428-7709447 | None:intergenic | 40.0% |
| ! | TTGATTCTGAGGAGGATGTT+TGG | - | chr8_1:7709455-7709474 | None:intergenic | 40.0% |
| TTTACATTTGTCAAGTGGGG+TGG | - | chr8_1:7709502-7709521 | None:intergenic | 40.0% | |
| GGTGTTTGAATTCGTGTCAA+CGG | - | chr8_1:7709759-7709778 | None:intergenic | 40.0% | |
| GGTTCCAAACGTTTCAAAGA+TGG | + | chr8_1:7709851-7709870 | Msa1176030:CDS | 40.0% | |
| CAACACCGCTAAAAACGTAA+AGG | + | chr8_1:7710219-7710238 | Msa1176030:intron | 40.0% | |
| AAATGAACACCGCAAGAAGA+CGG | + | chr8_1:7710408-7710427 | Msa1176030:intron | 40.0% | |
| ! | TTTGATTTCCCGTCTTCTTG+CGG | - | chr8_1:7710420-7710439 | None:intergenic | 40.0% |
| AACAAACCACCACACTTAGA+TGG | + | chr8_1:7710463-7710482 | Msa1176030:intron | 40.0% | |
| ATTTCACCATCTAAGTGTGG+TGG | - | chr8_1:7710472-7710491 | None:intergenic | 40.0% | |
| GTGATTTCACCATCTAAGTG+TGG | - | chr8_1:7710475-7710494 | None:intergenic | 40.0% | |
| GAGATAAAAAGATGACGAGG+GGG | + | chr8_1:7710544-7710563 | Msa1176030:intron | 40.0% | |
| ! | CTTCATTGTGTGGTGGTTTT+GGG | - | chr8_1:7710591-7710610 | None:intergenic | 40.0% |
| ! | TCTTCATTGTGTGGTGGTTT+TGG | - | chr8_1:7710592-7710611 | None:intergenic | 40.0% |
| CTTCCAGTTTCTTCATTGTG+TGG | - | chr8_1:7710601-7710620 | None:intergenic | 40.0% | |
| !! | AGGGGCATTAAGATGTTGAA+AGG | - | chr8_1:7711202-7711221 | None:intergenic | 40.0% |
| CGCAAGTTTGTGACCTAAAT+AGG | - | chr8_1:7711222-7711241 | None:intergenic | 40.0% | |
| ! | TGAAGCTTTTGTTGAAGGGT+TGG | - | chr8_1:7708982-7709001 | None:intergenic | 40.0% |
| TCCAAACCCAATCCGAAAAT+TGG | + | chr8_1:7709010-7709029 | Msa1176030:CDS | 40.0% | |
| !! | TCCAATTTTCGGATTGGGTT+TGG | - | chr8_1:7709014-7709033 | None:intergenic | 40.0% |
| !! | TAGATTTGGCTTGGTATACG+AGG | - | chr8_1:7709428-7709447 | None:intergenic | 40.0% |
| ! | TTGATTCTGAGGAGGATGTT+TGG | - | chr8_1:7709455-7709474 | None:intergenic | 40.0% |
| TTTACATTTGTCAAGTGGGG+TGG | - | chr8_1:7709502-7709521 | None:intergenic | 40.0% | |
| GGTGTTTGAATTCGTGTCAA+CGG | - | chr8_1:7709759-7709778 | None:intergenic | 40.0% | |
| GGTTCCAAACGTTTCAAAGA+TGG | + | chr8_1:7709851-7709870 | Msa1176030:CDS | 40.0% | |
| CAACACCGCTAAAAACGTAA+AGG | + | chr8_1:7710219-7710238 | Msa1176030:intron | 40.0% | |
| AAATGAACACCGCAAGAAGA+CGG | + | chr8_1:7710408-7710427 | Msa1176030:intron | 40.0% | |
| ! | TTTGATTTCCCGTCTTCTTG+CGG | - | chr8_1:7710420-7710439 | None:intergenic | 40.0% |
| AACAAACCACCACACTTAGA+TGG | + | chr8_1:7710463-7710482 | Msa1176030:intron | 40.0% | |
| ATTTCACCATCTAAGTGTGG+TGG | - | chr8_1:7710472-7710491 | None:intergenic | 40.0% | |
| GTGATTTCACCATCTAAGTG+TGG | - | chr8_1:7710475-7710494 | None:intergenic | 40.0% | |
| GAGATAAAAAGATGACGAGG+GGG | + | chr8_1:7710544-7710563 | Msa1176030:intron | 40.0% | |
| ! | CTTCATTGTGTGGTGGTTTT+GGG | - | chr8_1:7710591-7710610 | None:intergenic | 40.0% |
| ! | TCTTCATTGTGTGGTGGTTT+TGG | - | chr8_1:7710592-7710611 | None:intergenic | 40.0% |
| CTTCCAGTTTCTTCATTGTG+TGG | - | chr8_1:7710601-7710620 | None:intergenic | 40.0% | |
| !! | AGGGGCATTAAGATGTTGAA+AGG | - | chr8_1:7711202-7711221 | None:intergenic | 40.0% |
| CGCAAGTTTGTGACCTAAAT+AGG | - | chr8_1:7711222-7711241 | None:intergenic | 40.0% | |
| !! | TGTTGAAGGGTTGGTGTTTG+TGG | - | chr8_1:7708973-7708992 | None:intergenic | 45.0% |
| CCTTCACCCCAAGATAAGAA+AGG | - | chr8_1:7709081-7709100 | None:intergenic | 45.0% | |
| CCTTTCTTATCTTGGGGTGA+AGG | + | chr8_1:7709078-7709097 | Msa1176030:CDS | 45.0% | |
| TCCAATGAAGCACACATGCA+TGG | + | chr8_1:7709321-7709340 | Msa1176030:CDS | 45.0% | |
| TCCATGCATGTGTGCTTCAT+TGG | - | chr8_1:7709325-7709344 | None:intergenic | 45.0% | |
| TCAAACACCGATGAACCATG+TGG | + | chr8_1:7709770-7709789 | Msa1176030:CDS | 45.0% | |
| TGCAACGACAACTTCAATCG+TGG | + | chr8_1:7710010-7710029 | Msa1176030:CDS | 45.0% | |
| AATGAACACCGCAAGAAGAC+GGG | + | chr8_1:7710409-7710428 | Msa1176030:intron | 45.0% | |
| ! | TTGTTGTTCGTCGTCTTGTG+CGG | - | chr8_1:7710448-7710467 | None:intergenic | 45.0% |
| CCAGTTTCTTCATTGTGTGG+TGG | - | chr8_1:7710598-7710617 | None:intergenic | 45.0% | |
| CCACCACACAATGAAGAAAC+TGG | + | chr8_1:7710595-7710614 | Msa1176030:intron | 45.0% | |
| !! | TGTTGAAGGGTTGGTGTTTG+TGG | - | chr8_1:7708973-7708992 | None:intergenic | 45.0% |
| CCTTCACCCCAAGATAAGAA+AGG | - | chr8_1:7709081-7709100 | None:intergenic | 45.0% | |
| CCTTTCTTATCTTGGGGTGA+AGG | + | chr8_1:7709078-7709097 | Msa1176030:CDS | 45.0% | |
| TCCAATGAAGCACACATGCA+TGG | + | chr8_1:7709321-7709340 | Msa1176030:CDS | 45.0% | |
| TCCATGCATGTGTGCTTCAT+TGG | - | chr8_1:7709325-7709344 | None:intergenic | 45.0% | |
| TCAAACACCGATGAACCATG+TGG | + | chr8_1:7709770-7709789 | Msa1176030:CDS | 45.0% | |
| TGCAACGACAACTTCAATCG+TGG | + | chr8_1:7710010-7710029 | Msa1176030:CDS | 45.0% | |
| AATGAACACCGCAAGAAGAC+GGG | + | chr8_1:7710409-7710428 | Msa1176030:intron | 45.0% | |
| ! | TTGTTGTTCGTCGTCTTGTG+CGG | - | chr8_1:7710448-7710467 | None:intergenic | 45.0% |
| CCAGTTTCTTCATTGTGTGG+TGG | - | chr8_1:7710598-7710617 | None:intergenic | 45.0% | |
| CCACCACACAATGAAGAAAC+TGG | + | chr8_1:7710595-7710614 | Msa1176030:intron | 45.0% | |
| !! | GGGTTGGTGTTTGTGGTGAA+GGG | - | chr8_1:7708966-7708985 | None:intergenic | 50.0% |
| !! | AGGGTTGGTGTTTGTGGTGA+AGG | - | chr8_1:7708967-7708986 | None:intergenic | 50.0% |
| ! | TGGGGTGAAGGCTATTTCCA+AGG | + | chr8_1:7709090-7709109 | Msa1176030:CDS | 50.0% |
| GTACAAACGGCGATGCTGAA+TGG | + | chr8_1:7709160-7709179 | Msa1176030:CDS | 50.0% | |
| ACATTTGTCAAGTGGGGTGG+TGG | - | chr8_1:7709499-7709518 | None:intergenic | 50.0% | |
| CTTCTCATGGGTGGCTTCTT+TGG | - | chr8_1:7709580-7709599 | None:intergenic | 50.0% | |
| TCGGCTTCCACATGGTTCAT+CGG | - | chr8_1:7709780-7709799 | None:intergenic | 50.0% | |
| TTTGTCTCTCGGCTTCCACA+TGG | - | chr8_1:7709788-7709807 | None:intergenic | 50.0% | |
| ATGTGGAAGCCGAGAGACAA+AGG | + | chr8_1:7709787-7709806 | Msa1176030:CDS | 50.0% | |
| ACCGGAATATTCATGGCCTC+CGG | + | chr8_1:7710328-7710347 | Msa1176030:intron | 50.0% | |
| TCCGGAGGCCATGAATATTC+CGG | - | chr8_1:7710332-7710351 | None:intergenic | 50.0% | |
| !! | GGGTTGGTGTTTGTGGTGAA+GGG | - | chr8_1:7708966-7708985 | None:intergenic | 50.0% |
| !! | AGGGTTGGTGTTTGTGGTGA+AGG | - | chr8_1:7708967-7708986 | None:intergenic | 50.0% |
| ! | TGGGGTGAAGGCTATTTCCA+AGG | + | chr8_1:7709090-7709109 | Msa1176030:CDS | 50.0% |
| GTACAAACGGCGATGCTGAA+TGG | + | chr8_1:7709160-7709179 | Msa1176030:CDS | 50.0% | |
| ACATTTGTCAAGTGGGGTGG+TGG | - | chr8_1:7709499-7709518 | None:intergenic | 50.0% | |
| CTTCTCATGGGTGGCTTCTT+TGG | - | chr8_1:7709580-7709599 | None:intergenic | 50.0% | |
| TCGGCTTCCACATGGTTCAT+CGG | - | chr8_1:7709780-7709799 | None:intergenic | 50.0% | |
| TTTGTCTCTCGGCTTCCACA+TGG | - | chr8_1:7709788-7709807 | None:intergenic | 50.0% | |
| ATGTGGAAGCCGAGAGACAA+AGG | + | chr8_1:7709787-7709806 | Msa1176030:CDS | 50.0% | |
| ACCGGAATATTCATGGCCTC+CGG | + | chr8_1:7710328-7710347 | Msa1176030:intron | 50.0% | |
| TCCGGAGGCCATGAATATTC+CGG | - | chr8_1:7710332-7710351 | None:intergenic | 50.0% | |
| GATGACGAGGGGGTGATTTC+AGG | + | chr8_1:7710554-7710573 | Msa1176030:intron | 55.0% | |
| GATGACGAGGGGGTGATTTC+AGG | + | chr8_1:7710554-7710573 | Msa1176030:intron | 55.0% | |
| ATGGGTGGCTTCTTTGGCGC+TGG | - | chr8_1:7709574-7709593 | None:intergenic | 60.0% | |
| CGTCAACGTTGCAGATCCGG+AGG | - | chr8_1:7710347-7710366 | None:intergenic | 60.0% | |
| GGGCGTCAACGTTGCAGATC+CGG | - | chr8_1:7710350-7710369 | None:intergenic | 60.0% | |
| ATGGGTGGCTTCTTTGGCGC+TGG | - | chr8_1:7709574-7709593 | None:intergenic | 60.0% | |
| CGTCAACGTTGCAGATCCGG+AGG | - | chr8_1:7710347-7710366 | None:intergenic | 60.0% | |
| GGGCGTCAACGTTGCAGATC+CGG | - | chr8_1:7710350-7710369 | None:intergenic | 60.0% | |
| ! | GCCAACATGGGTGCCGTCTC+TGG | + | chr8_1:7709546-7709565 | Msa1176030:CDS | 65.0% |
| GCCAGAGACGGCACCCATGT+TGG | - | chr8_1:7709550-7709569 | None:intergenic | 65.0% | |
| !! | TTTGGCGCTGGCGCCAGAGA+CGG | - | chr8_1:7709562-7709581 | None:intergenic | 65.0% |
| ! | GCCAACATGGGTGCCGTCTC+TGG | + | chr8_1:7709546-7709565 | Msa1176030:CDS | 65.0% |
| GCCAGAGACGGCACCCATGT+TGG | - | chr8_1:7709550-7709569 | None:intergenic | 65.0% | |
| !! | TTTGGCGCTGGCGCCAGAGA+CGG | - | chr8_1:7709562-7709581 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 7708919 | 7711263 | 7708919 | ID=Msa1176030;Name=Msa1176030 |
| chr8_1 | mRNA | 7708919 | 7711263 | 7708919 | ID=Msa1176030-mRNA-1;Parent=Msa1176030;Name=Msa1176030-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|0.5|1|1|2|0|382 |
| chr8_1 | exon | 7708919 | 7710031 | 7708919 | ID=Msa1176030-mRNA-1:exon:2774;Parent=Msa1176030-mRNA-1 |
| chr8_1 | exon | 7711228 | 7711263 | 7711228 | ID=Msa1176030-mRNA-1:exon:2775;Parent=Msa1176030-mRNA-1 |
| chr8_1 | CDS | 7708919 | 7710031 | 7708919 | ID=Msa1176030-mRNA-1:cds;Parent=Msa1176030-mRNA-1 |
| chr8_1 | CDS | 7711228 | 7711263 | 7711228 | ID=Msa1176030-mRNA-1:cds;Parent=Msa1176030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
