AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1179350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179350 MtrunA17_Chr8g0342481 83.863 409 51 3 19 420 1 401 0.0 687
Msa1179350 MtrunA17_Chr8g0342481 50.667 150 61 7 315 456 153 297 7.72e-23 100
Msa1179350 MtrunA17_Chr8g0342541 68.317 303 76 10 19 314 1 290 1.02e-126 373
Msa1179350 MtrunA17_Chr8g0342541 53.883 206 67 10 315 503 153 347 1.51e-40 149
Msa1179350 MtrunA17_Chr8g0342521 67.219 302 80 9 19 314 1 289 1.08e-123 365
Msa1179350 MtrunA17_Chr8g0342521 46.639 238 97 10 286 503 120 347 6.66e-39 144
Msa1179350 MtrunA17_Chr2g0330041 56.550 313 103 16 19 304 1 307 1.53e-88 277
Msa1179350 MtrunA17_Chr2g0309911 76.613 124 27 2 19 142 1 122 1.26e-62 207
Msa1179350 MtrunA17_Chr1g0193371 71.774 124 34 1 19 142 1 123 1.69e-59 200
Msa1179350 MtrunA17_Chr1g0193801 70.968 124 35 1 19 142 1 123 2.52e-59 200
Msa1179350 MtrunA17_Chr7g0270891 72.581 124 33 1 19 142 1 123 2.83e-59 199
Msa1179350 MtrunA17_Chr8g0342461 95.556 90 4 0 19 108 1 90 4.53e-59 191
Msa1179350 MtrunA17_Chr8g0342471 94.444 90 5 0 19 108 1 90 1.88e-58 190
Msa1179350 MtrunA17_Chr4g0058631 70.400 125 36 1 19 143 1 124 1.38e-57 195
Msa1179350 MtrunA17_Chr1g0211161 70.732 123 35 1 21 143 4 125 1.56e-57 191
Msa1179350 MtrunA17_Chr3g0117091 70.400 125 36 1 19 143 1 124 3.26e-57 194
Msa1179350 MtrunA17_Chr5g0397231 72.973 111 29 1 19 129 1 110 2.36e-55 188
Msa1179350 MtrunA17_Chr7g0271241 72.581 124 33 1 19 142 1 123 4.13e-55 189
Msa1179350 MtrunA17_Chr8g0387421 70.085 117 34 1 19 135 1 116 7.03e-55 186
Msa1179350 MtrunA17_Chr8g0342531 86.667 90 11 1 19 108 1 89 1.66e-52 175
Msa1179350 MtrunA17_Chr8g0342511 87.500 88 10 1 19 106 1 87 6.49e-51 168
Msa1179350 MtrunA17_Chr8g0385321 61.600 125 47 1 19 143 1 124 3.29e-49 171
Msa1179350 MtrunA17_Chr5g0435101 63.025 119 43 1 24 142 5 122 1.08e-48 167
Msa1179350 MtrunA17_Chr3g0088461 68.182 110 34 1 26 135 18 126 1.61e-48 170
Msa1179350 MtrunA17_Chr4g0037141 60.000 125 49 1 19 143 1 124 1.71e-48 169
Msa1179350 MtrunA17_Chr3g0131121 60.484 124 48 1 19 142 1 123 7.12e-48 167
Msa1179350 MtrunA17_Chr4g0032401 69.159 107 32 1 29 135 16 121 7.07e-47 166
Msa1179350 MtrunA17_Chr3g0115821 53.957 139 60 3 19 154 1 138 8.64e-47 166
Msa1179350 MtrunA17_Chr4g0057031 60.484 124 48 1 19 142 1 123 9.82e-47 163
Msa1179350 MtrunA17_Chr2g0328771 67.925 106 33 1 30 135 20 124 1.68e-46 164
Msa1179350 MtrunA17_Chr5g0434571 60.800 125 48 1 18 142 36 159 2.11e-46 165
Msa1179350 MtrunA17_Chr3g0110351 60.484 124 48 1 19 142 1 123 3.23e-46 163
Msa1179350 MtrunA17_Chr1g0203411 60.684 117 45 1 19 135 1 116 3.98e-46 162
Msa1179350 MtrunA17_Chr5g0410961 58.871 124 50 1 19 142 1 123 7.31e-46 163
Msa1179350 MtrunA17_Chr4g0039971 56.000 125 54 1 18 142 1 124 8.32e-46 163
Msa1179350 MtrunA17_Chr4g0044421 60.484 124 48 1 19 142 1 123 2.59e-45 157
Msa1179350 MtrunA17_Chr2g0323351 58.678 121 47 2 19 138 1 119 2.75e-45 159
Msa1179350 MtrunA17_Chr1g0151941 46.875 160 85 0 19 178 1 160 4.15e-45 159
Msa1179350 MtrunA17_Chr4g0048511 56.716 134 55 3 19 150 1 133 5.80e-45 161
Msa1179350 MtrunA17_Chr2g0323411 44.560 193 99 4 19 209 1 187 6.88e-45 160
Msa1179350 MtrunA17_Chr2g0281071 58.400 125 50 2 19 142 1 124 8.51e-45 160
Msa1179350 MtrunA17_Chr7g0274581 51.049 143 62 2 19 161 1 135 1.02e-44 156
Msa1179350 MtrunA17_Chr6g0453471 55.645 124 54 1 19 142 1 123 4.66e-44 159
Msa1179350 MtrunA17_Chr2g0311221 63.208 106 38 1 24 129 8 112 4.84e-44 158
Msa1179350 MtrunA17_Chr1g0203441 64.545 110 38 1 26 135 9 117 6.88e-44 156
Msa1179350 MtrunA17_Chr4g0042671 55.200 125 55 1 19 143 1 124 1.15e-43 159
Msa1179350 MtrunA17_Chr7g0228891 61.538 117 44 1 19 135 1 116 1.25e-43 155
Msa1179350 MtrunA17_Chr4g0070611 57.265 117 49 1 19 135 1 116 1.52e-43 156
Msa1179350 MtrunA17_Chr1g0187761 60.684 117 45 1 19 135 1 116 1.77e-43 154
Msa1179350 MtrunA17_Chr4g0070641 57.265 117 49 1 19 135 1 116 2.49e-43 151
Msa1179350 MtrunA17_Chr7g0217741 52.174 138 64 2 19 155 1 137 2.79e-43 155
Msa1179350 MtrunA17_Chr6g0470971 60.504 119 46 1 27 145 11 128 3.68e-43 154
Msa1179350 MtrunA17_Chr6g0452271 57.258 124 52 1 19 142 1 123 6.42e-43 155
Msa1179350 MtrunA17_Chr4g0022901 49.342 152 66 3 23 165 6 155 7.82e-43 153
Msa1179350 MtrunA17_Chr8g0349261 56.000 125 54 1 19 142 1 125 8.83e-43 154
Msa1179350 MtrunA17_Chr5g0395281 60.177 113 44 1 30 142 12 123 1.09e-42 154
Msa1179350 MtrunA17_Chr4g0022931 58.772 114 44 2 23 135 6 117 1.15e-42 152
Msa1179350 MtrunA17_Chr1g0167661 56.780 118 50 1 19 136 1 117 2.71e-42 151
Msa1179350 MtrunA17_Chr3g0121241 56.303 119 51 1 24 142 36 153 9.05e-42 151
Msa1179350 MtrunA17_Chr7g0275911 57.265 117 49 1 19 135 1 116 1.85e-41 149
Msa1179350 MtrunA17_Chr7g0261281 56.410 117 50 1 19 135 1 116 2.40e-41 149
Msa1179350 MtrunA17_Chr1g0167691 55.932 118 51 1 19 136 1 117 2.81e-41 148
Msa1179350 MtrunA17_Chr3g0103281 56.154 130 55 2 19 147 1 129 2.90e-41 150
Msa1179350 MtrunA17_Chr1g0194951 39.091 220 96 5 19 235 1 185 5.59e-41 151
Msa1179350 MtrunA17_Chr8g0346561 55.556 117 51 1 19 135 1 116 1.51e-40 148
Msa1179350 MtrunA17_Chr4g0022911 54.032 124 54 3 19 141 1 122 2.80e-40 147
Msa1179350 MtrunA17_Chr4g0028311 54.622 119 54 0 19 137 1 119 5.55e-40 147
Msa1179350 MtrunA17_Chr1g0152011 53.782 119 55 0 19 137 1 119 7.94e-40 147
Msa1179350 MtrunA17_Chr4g0068061 51.145 131 61 2 19 147 1 130 8.85e-40 147
Msa1179350 MtrunA17_Chr5g0400821 52.941 119 56 0 19 137 1 119 6.80e-39 144
Msa1179350 MtrunA17_Chr8g0343831 57.273 110 46 1 26 135 4 112 1.11e-38 141
Msa1179350 MtrunA17_Chr3g0135311 51.261 119 58 0 19 137 1 119 1.69e-38 143
Msa1179350 MtrunA17_Chr4g0055981 58.716 109 44 1 26 134 51 158 3.12e-38 139
Msa1179350 MtrunA17_Chr4g0054391 57.273 110 47 0 19 128 1 110 4.79e-38 140
Msa1179350 MtrunA17_Chr7g0264641 52.101 119 57 0 19 137 1 119 4.90e-38 140
Msa1179350 MtrunA17_Chr2g0327351 54.955 111 50 0 19 129 1 111 1.19e-37 140
Msa1179350 MtrunA17_Chr6g0450101 56.757 111 47 1 29 139 13 122 3.86e-37 135
Msa1179350 MtrunA17_Chr7g0228231 54.622 119 51 2 19 135 1 118 4.46e-37 135
Msa1179350 MtrunA17_Chr7g0217221 52.991 117 54 1 19 135 1 116 5.47e-37 137
Msa1179350 MtrunA17_Chr7g0240821 60.396 101 39 1 35 135 6 105 7.31e-37 135
Msa1179350 MtrunA17_Chr5g0417821 56.140 114 49 1 30 143 7 119 8.41e-37 137
Msa1179350 MtrunA17_Chr7g0269831 56.303 119 51 1 19 137 1 118 2.45e-36 138
Msa1179350 MtrunA17_Chr4g0022881 54.206 107 48 1 27 133 9 114 2.76e-36 134
Msa1179350 MtrunA17_Chr3g0092401 52.542 118 55 1 18 135 1 117 5.62e-36 135
Msa1179350 MtrunA17_Chr1g0209661 45.139 144 70 2 14 149 3 145 1.38e-35 134
Msa1179350 MtrunA17_Chr4g0072751 52.252 111 53 0 19 129 1 111 1.52e-35 135
Msa1179350 MtrunA17_Chr4g0060721 48.760 121 61 1 18 138 1 120 4.16e-35 134
Msa1179350 MtrunA17_Chr1g0186061 51.786 112 53 1 23 134 13 123 5.18e-35 131
Msa1179350 MtrunA17_Chr1g0168661 50.413 121 56 2 17 134 5 124 6.77e-35 131
Msa1179350 MtrunA17_Chr6g0453211 53.153 111 51 1 19 129 1 110 1.63e-34 132
Msa1179350 MtrunA17_Chr4g0022891 55.238 105 46 1 27 131 9 112 2.13e-34 129
Msa1179350 MtrunA17_Chr7g0254411 50.427 117 57 1 19 135 1 116 2.37e-34 132
Msa1179350 MtrunA17_Chr1g0180391 47.107 121 63 1 15 135 4 123 2.41e-34 129
Msa1179350 MtrunA17_Chr6g0487491 48.148 135 62 1 19 145 1 135 2.51e-34 130
Msa1179350 MtrunA17_Chr1g0194291 49.167 120 57 2 18 134 6 124 3.03e-34 129
Msa1179350 MtrunA17_Chr7g0220341 54.545 110 47 2 30 137 25 133 4.00e-33 127
Msa1179350 MtrunA17_Chr5g0434931 51.351 111 53 1 30 140 35 144 4.04e-33 127
Msa1179350 MtrunA17_Chr3g0099131 53.333 105 48 1 30 134 41 144 4.62e-33 132
Msa1179350 MtrunA17_Chr1g0154031 53.333 105 48 1 30 134 76 179 4.72e-33 130
Msa1179350 MtrunA17_Chr5g0434911 51.327 113 54 1 25 137 16 127 4.76e-33 127
Msa1179350 MtrunA17_Chr1g0194301 49.524 105 52 1 30 134 33 136 6.03e-33 126
Msa1179350 MtrunA17_Chr4g0042611 57.303 89 37 1 19 107 1 88 6.14e-33 120
Msa1179350 MtrunA17_Chr5g0434831 52.336 107 50 1 30 136 7 112 2.46e-32 122
Msa1179350 MtrunA17_Chr3g0080861 42.336 137 76 2 30 166 37 170 3.67e-32 129
Msa1179350 MtrunA17_Chr8g0354661 52.381 105 49 1 30 134 37 140 4.18e-32 129
Msa1179350 MtrunA17_Chr7g0247131 66.667 81 27 0 62 142 9 89 5.90e-32 123
Msa1179350 MtrunA17_Chr2g0327821 49.074 108 54 1 27 134 3 109 8.36e-32 122
Msa1179350 MtrunA17_Chr7g0228991 52.778 108 50 1 30 137 29 135 1.53e-31 122
Msa1179350 MtrunA17_Chr8g0360111 53.398 103 47 1 30 132 25 126 6.71e-31 120
Msa1179350 MtrunA17_Chr4g0030881 46.610 118 55 2 24 134 1 117 1.23e-30 119
Msa1179350 MtrunA17_Chr2g0322521 52.294 109 51 1 26 134 25 132 5.46e-30 121
Msa1179350 MtrunA17_Chr5g0434841 49.533 107 53 1 30 136 20 125 6.85e-30 119
Msa1179350 MtrunA17_Chr2g0323321 56.180 89 34 2 25 111 6 91 5.19e-29 110
Msa1179350 MtrunA17_Chr4g0068921 52.885 104 48 1 30 133 24 126 7.27e-29 112
Msa1179350 MtrunA17_Chr8g0334881 51.376 109 51 2 22 129 2 109 1.12e-28 115
Msa1179350 MtrunA17_Chr1g0192411 50.000 106 52 1 29 134 11 115 1.59e-28 117
Msa1179350 MtrunA17_Chr2g0293911 52.885 104 48 1 30 133 24 126 2.77e-28 115
Msa1179350 MtrunA17_Chr5g0440781 48.571 105 52 2 30 133 12 115 2.10e-27 108
Msa1179350 MtrunA17_Chr4g0013361 53.922 102 43 3 30 129 10 109 2.88e-27 111
Msa1179350 MtrunA17_Chr5g0441141 48.571 105 52 2 30 133 12 115 5.77e-27 110
Msa1179350 MtrunA17_Chr5g0440761 48.571 105 52 2 30 133 12 115 5.87e-27 109
Msa1179350 MtrunA17_Chr2g0294811 52.809 89 41 1 19 107 1 88 2.14e-26 103
Msa1179350 MtrunA17_Chr5g0429661 48.485 99 49 1 32 130 122 218 2.48e-25 107
Msa1179350 MtrunA17_Chr5g0441131 44.643 112 60 2 23 133 2 112 3.73e-25 102
Msa1179350 MtrunA17_Chr5g0395221 56.790 81 34 1 27 107 9 88 6.47e-25 98.6
Msa1179350 MtrunA17_Chr7g0229101 61.429 70 27 0 62 131 3 72 3.63e-24 100
Msa1179350 MtrunA17_Chr6g0480581 49.038 104 47 4 32 133 4 103 6.93e-24 100
Msa1179350 MtrunA17_Chr7g0238631 48.571 105 50 3 32 135 113 214 9.34e-24 104
Msa1179350 MtrunA17_Chr5g0434901 61.194 67 26 0 65 131 7 73 1.16e-23 95.9
Msa1179350 MtrunA17_Chr7g0229131 56.000 75 33 0 62 136 3 77 2.00e-23 97.1
Msa1179350 MtrunA17_Chr3g0099141 51.807 83 39 1 30 112 40 121 2.89e-23 95.5
Msa1179350 MtrunA17_Chr4g0008551 45.794 107 54 3 32 137 38 141 4.78e-23 100
Msa1179350 MtrunA17_Chr4g0053431 48.544 103 51 2 32 134 5 105 2.32e-22 96.7
Msa1179350 MtrunA17_Chr3g0139671 45.714 105 53 3 32 135 85 186 5.75e-22 100
Msa1179350 MtrunA17_Chr4g0042501 43.478 115 58 2 20 134 98 205 7.05e-22 97.8
Msa1179350 MtrunA17_Chr5g0417621 45.283 106 56 1 29 134 131 234 7.53e-22 98.2
Msa1179350 MtrunA17_Chr6g0454921 45.299 117 57 4 32 144 15 128 8.81e-22 93.6
Msa1179350 MtrunA17_Chr1g0157731 44.762 105 54 3 32 135 91 192 3.44e-21 97.4
Msa1179350 MtrunA17_Chr5g0401731 45.536 112 54 4 32 139 15 123 3.51e-21 94.4
Msa1179350 MtrunA17_Chr4g0058991 43.119 109 58 3 27 134 204 309 4.55e-21 95.9
Msa1179350 MtrunA17_Chr3g0125801 47.573 103 52 1 32 134 16 116 1.00e-20 92.4
Msa1179350 MtrunA17_Chr3g0117511 42.342 111 58 4 27 134 176 283 1.41e-20 94.4
Msa1179350 MtrunA17_Chr1g0177901 50.000 88 42 2 43 130 5 90 2.17e-20 89.7
Msa1179350 MtrunA17_Chr7g0228531 38.462 130 74 4 5 134 196 319 3.10e-20 93.2
Msa1179350 MtrunA17_Chr6g0453751 48.936 94 36 3 31 112 17 110 9.65e-20 85.5
Msa1179350 MtrunA17_Chr6g0460661 42.268 97 54 1 29 125 13 107 4.00e-19 84.7
Msa1179350 MtrunA17_Chr3g0133601 44.660 103 55 2 32 134 37 137 4.28e-19 86.3
Msa1179350 MtrunA17_Chr5g0425591 44.565 92 49 2 23 113 2 92 9.12e-19 81.3
Msa1179350 MtrunA17_Chr5g0437321 44.554 101 52 3 32 131 19 116 1.05e-18 86.7
Msa1179350 MtrunA17_Chr3g0093811 43.299 97 54 1 62 157 13 109 1.15e-18 85.9
Msa1179350 MtrunA17_Chr7g0228401 44.000 100 52 3 43 142 290 385 2.58e-18 87.8
Msa1179350 MtrunA17_Chr7g0254261 36.364 132 75 4 4 134 66 189 5.49e-18 85.5
Msa1179350 MtrunA17_Chr5g0397841 43.750 96 50 3 35 129 113 205 1.36e-17 85.5
Msa1179350 MtrunA17_Chr6g0460671 41.905 105 55 4 32 134 99 199 1.94e-17 84.0
Msa1179350 MtrunA17_Chr7g0228481 37.121 132 75 5 5 136 196 319 5.13e-17 83.2
Msa1179350 MtrunA17_Chr7g0238651 40.404 99 56 2 31 127 6 103 2.23e-15 77.8
Msa1179350 MtrunA17_Chr7g0233061 35.354 99 60 3 32 130 180 274 3.45e-15 77.0
Msa1179350 MtrunA17_Chr5g0416341 39.000 100 59 2 35 134 29 126 1.54e-14 75.9
Msa1179350 MtrunA17_Chr8g0362231 37.736 106 63 3 35 140 25 127 8.17e-14 73.6
Msa1179350 MtrunA17_Chr5g0434871 57.778 45 19 0 93 137 2 46 6.93e-13 63.9
Msa1179350 MtrunA17_Chr1g0193901 47.619 63 31 2 26 87 7 68 3.50e-12 63.2
Msa1179350 MtrunA17_Chr1g0193891 47.619 63 31 2 26 87 7 68 3.50e-12 63.2
Msa1179350 MtrunA17_Chr1g0193871 47.619 63 31 2 26 87 7 68 3.50e-12 63.2
Msa1179350 MtrunA17_Chr1g0193881 47.619 63 31 2 26 87 7 68 3.50e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179350 AT3G13890.2 84.874 119 17 1 19 137 1 118 9.17e-67 219
Msa1179350 AT3G13890.1 78.906 128 17 2 19 137 1 127 1.19e-63 211
Msa1179350 AT3G12720.1 77.869 122 26 1 22 143 14 134 3.75e-63 208
Msa1179350 AT1G57560.1 72.581 124 33 1 19 142 1 123 7.50e-61 202
Msa1179350 AT1G57560.2 72.581 124 33 1 19 142 1 123 1.03e-60 201
Msa1179350 AT5G26660.1 72.800 125 33 1 19 143 1 124 1.81e-60 202
Msa1179350 AT4G01680.3 72.581 124 33 1 19 142 1 123 4.85e-60 198
Msa1179350 AT1G09540.1 73.387 124 32 1 19 142 1 123 1.82e-59 200
Msa1179350 AT4G01680.1 72.581 124 33 1 19 142 1 123 2.13e-59 199
Msa1179350 AT1G63910.1 72.650 117 31 1 19 135 1 116 4.17e-57 194
Msa1179350 AT4G01680.2 66.176 136 33 2 19 142 1 135 6.18e-56 191
Msa1179350 AT4G12350.1 57.343 143 54 2 19 161 1 136 3.49e-50 173
Msa1179350 AT2G16720.1 60.000 125 49 1 19 143 1 124 5.01e-50 172
Msa1179350 AT4G34990.1 60.000 125 49 1 19 143 1 124 8.56e-49 169
Msa1179350 AT4G22680.1 61.290 124 47 1 19 142 1 123 3.92e-48 167
Msa1179350 AT4G21440.1 49.412 170 78 4 19 182 1 168 4.36e-48 170
Msa1179350 AT4G38620.1 59.200 125 50 1 19 143 1 124 4.55e-48 167
Msa1179350 AT1G22640.1 59.677 124 49 1 19 142 1 123 1.37e-47 166
Msa1179350 AT5G12870.1 69.444 108 32 1 28 135 16 122 3.26e-47 165
Msa1179350 AT4G09460.1 58.871 124 50 1 19 142 1 123 3.99e-47 164
Msa1179350 AT3G08500.1 65.254 118 37 2 21 135 18 134 5.60e-47 167
Msa1179350 AT4G05100.1 58.400 125 50 2 19 142 1 124 4.41e-46 164
Msa1179350 AT3G02940.2 57.258 124 52 1 19 142 1 123 4.73e-46 163
Msa1179350 AT3G02940.1 57.258 124 52 1 19 142 1 123 9.18e-46 163
Msa1179350 AT3G02940.3 57.258 124 52 1 19 142 1 123 9.18e-46 163
Msa1179350 AT5G16600.1 60.484 124 48 1 19 142 1 123 1.35e-45 162
Msa1179350 AT3G01140.2 56.452 124 53 1 19 142 1 123 1.59e-45 163
Msa1179350 AT1G34670.1 58.065 124 51 1 19 142 1 123 1.87e-45 163
Msa1179350 AT1G66230.1 59.677 124 49 1 19 142 1 123 2.00e-45 160
Msa1179350 AT5G15310.4 50.685 146 65 2 19 158 1 145 2.59e-45 159
Msa1179350 AT5G65230.1 59.322 118 47 1 19 136 1 117 3.60e-45 161
Msa1179350 AT3G61250.1 57.258 124 52 1 19 142 1 123 3.63e-45 160
Msa1179350 AT5G54230.1 59.677 124 49 1 19 142 1 123 5.44e-45 160
Msa1179350 AT3G01140.1 53.571 140 61 2 6 142 28 166 5.76e-45 162
Msa1179350 AT5G15310.1 50.685 146 65 2 19 158 1 145 6.15e-45 160
Msa1179350 AT4G28110.1 56.452 124 53 1 19 142 1 123 9.01e-45 159
Msa1179350 AT5G15310.2 50.685 146 65 2 19 158 1 145 9.06e-45 160
Msa1179350 AT4G17785.2 57.600 125 51 2 19 142 1 124 5.29e-44 159
Msa1179350 AT5G16770.4 45.263 190 94 5 19 206 1 182 5.30e-44 158
Msa1179350 AT5G16770.3 45.263 190 94 5 19 206 1 182 5.30e-44 158
Msa1179350 AT4G17785.1 57.600 125 51 2 19 142 1 124 6.69e-44 159
Msa1179350 AT5G16770.1 45.263 190 94 5 19 206 1 182 1.07e-43 157
Msa1179350 AT5G16770.2 45.263 190 94 5 19 206 1 182 1.07e-43 157
Msa1179350 AT1G35515.1 55.645 124 54 1 19 142 1 123 1.33e-43 154
Msa1179350 AT1G79180.1 62.500 112 41 1 24 135 8 118 1.51e-43 156
Msa1179350 AT1G56160.1 62.500 112 41 1 24 135 8 118 2.56e-43 155
Msa1179350 AT5G23000.1 58.475 118 49 0 19 136 1 118 4.82e-43 155
Msa1179350 AT5G10280.1 55.085 118 52 1 19 136 1 117 6.60e-43 155
Msa1179350 AT2G31180.1 59.829 117 46 1 19 135 1 116 6.70e-43 153
Msa1179350 AT5G07690.1 54.032 124 56 1 19 142 1 123 7.21e-43 155
Msa1179350 AT5G07700.1 54.839 124 55 1 19 142 1 123 7.56e-43 155
Msa1179350 AT5G07700.2 54.839 124 55 1 19 142 1 123 7.56e-43 155
Msa1179350 AT5G56110.1 56.923 130 54 2 19 147 1 129 8.21e-43 155
Msa1179350 AT5G52260.1 63.636 110 39 1 27 136 9 117 9.21e-43 153
Msa1179350 AT3G23250.1 56.410 117 50 1 19 135 1 116 1.55e-42 153
Msa1179350 AT5G62320.1 50.735 136 61 1 20 149 3 138 1.67e-42 152
Msa1179350 AT1G16490.1 60.870 115 44 1 24 138 8 121 2.27e-42 152
Msa1179350 AT5G49330.1 58.974 117 47 1 19 135 1 116 7.30e-42 153
Msa1179350 AT5G61420.2 52.419 124 58 1 19 142 1 123 1.04e-41 153
Msa1179350 AT1G06180.1 58.120 117 48 1 19 135 1 116 1.24e-41 149
Msa1179350 AT3G48920.1 59.091 110 44 1 26 135 14 122 1.31e-41 150
Msa1179350 AT5G60890.1 53.279 122 56 1 19 140 1 121 1.33e-41 151
Msa1179350 AT3G13540.1 56.303 119 51 1 24 142 17 134 2.23e-41 149
Msa1179350 AT4G25560.1 63.303 109 39 1 28 136 8 115 2.89e-41 149
Msa1179350 AT5G14340.1 58.974 117 47 1 19 135 13 128 4.98e-41 149
Msa1179350 AT2G47460.1 58.120 117 48 1 19 135 1 116 6.50e-41 151
Msa1179350 AT1G18570.1 52.000 125 58 2 19 142 1 124 1.88e-40 149
Msa1179350 AT3G12820.1 59.292 113 45 1 24 136 8 119 1.92e-40 146
Msa1179350 AT5G57620.1 53.782 119 55 0 19 137 1 119 2.26e-40 149
Msa1179350 AT3G28470.1 51.007 149 64 2 19 159 1 148 6.12e-40 147
Msa1179350 AT3G49690.1 52.542 118 56 0 19 136 1 118 7.84e-39 144
Msa1179350 AT1G74080.1 52.419 124 58 1 19 142 1 123 8.17e-39 144
Msa1179350 AT3G27810.1 53.390 118 54 1 26 143 16 132 9.81e-39 141
Msa1179350 AT3G62610.1 54.701 117 52 1 19 135 1 116 1.10e-38 144
Msa1179350 AT5G65790.1 53.390 118 55 0 19 136 1 118 1.41e-38 145
Msa1179350 AT5G35550.1 55.645 124 47 2 12 135 3 118 2.46e-38 141
Msa1179350 AT2G36890.1 52.101 119 57 0 19 137 1 119 2.95e-38 142
Msa1179350 AT2G36890.2 49.231 130 66 0 8 137 31 160 3.53e-38 143
Msa1179350 AT4G37780.1 52.101 119 57 0 19 137 1 119 7.18e-38 141
Msa1179350 AT3G01530.1 51.587 126 58 2 10 135 7 129 1.96e-37 137
Msa1179350 AT5G14750.1 55.769 104 45 1 32 135 18 120 2.89e-37 136
Msa1179350 AT5G40350.1 56.481 108 46 1 29 136 16 122 4.68e-37 136
Msa1179350 AT1G79180.2 48.276 145 41 2 24 135 8 151 6.53e-37 139
Msa1179350 AT5G52600.1 51.938 129 56 2 26 149 8 135 9.36e-37 135
Msa1179350 AT1G74430.1 50.806 124 60 1 19 142 1 123 1.60e-36 136
Msa1179350 AT5G40330.1 55.769 104 45 1 32 135 14 116 2.32e-36 134
Msa1179350 AT1G74650.1 52.542 118 55 1 19 136 1 117 9.44e-36 136
Msa1179350 AT3G27920.1 50.450 111 54 1 28 138 12 121 1.07e-35 133
Msa1179350 AT1G48000.1 53.509 114 50 2 29 140 31 143 1.18e-35 133
Msa1179350 AT1G18710.1 53.097 113 52 1 30 142 12 123 1.43e-35 134
Msa1179350 AT3G47600.1 52.137 117 55 1 19 135 1 116 1.43e-35 135
Msa1179350 AT5G26660.2 73.750 80 21 0 64 143 14 93 4.86e-35 134
Msa1179350 AT1G08810.1 50.413 121 59 1 19 139 1 120 6.89e-35 132
Msa1179350 AT5G62470.2 52.137 117 55 1 19 135 1 116 7.44e-35 134
Msa1179350 AT3G11440.2 40.805 174 89 5 23 192 31 194 3.72e-34 134
Msa1179350 AT3G28910.1 51.282 117 56 1 19 135 1 116 4.15e-34 131
Msa1179350 AT4G13480.1 55.556 108 47 1 27 134 3 109 4.69e-34 129
Msa1179350 AT3G11440.3 40.805 174 89 5 23 192 31 194 1.22e-33 134
Msa1179350 AT3G11440.4 40.805 174 89 5 23 192 31 194 1.22e-33 134
Msa1179350 AT3G11440.1 40.805 174 89 5 23 192 31 194 1.22e-33 134
Msa1179350 AT3G24310.1 54.054 111 50 1 27 137 15 124 2.41e-33 127
Msa1179350 AT3G30210.1 53.922 102 46 1 32 133 29 129 2.91e-33 127
Msa1179350 AT2G47190.1 48.571 105 53 1 30 134 20 123 3.77e-33 127
Msa1179350 AT5G06100.1 54.286 105 47 1 30 134 32 135 4.17e-33 131
Msa1179350 AT5G62470.1 52.137 117 54 2 19 135 1 115 4.29e-33 129
Msa1179350 AT1G68320.1 48.361 122 62 1 28 149 17 137 4.95e-33 127
Msa1179350 AT2G26960.1 51.402 107 51 1 27 133 17 122 5.64e-33 130
Msa1179350 AT5G06100.5 54.286 105 47 1 30 134 32 135 1.25e-32 130
Msa1179350 AT5G06100.2 54.286 105 47 1 30 134 32 135 1.25e-32 130
Msa1179350 AT5G06100.3 54.286 105 47 1 30 134 32 135 1.25e-32 130
Msa1179350 AT5G06100.4 54.286 105 47 1 30 134 32 135 1.25e-32 130
Msa1179350 AT4G26930.1 49.580 119 57 2 30 148 19 134 3.14e-32 127
Msa1179350 AT1G66370.1 51.376 109 52 1 26 134 4 111 7.09e-32 123
Msa1179350 AT3G53200.1 51.852 108 51 1 27 134 6 112 1.21e-31 122
Msa1179350 AT5G55020.1 50.000 120 51 3 30 142 26 143 1.44e-31 128
Msa1179350 AT1G66380.1 54.128 109 49 1 26 134 4 111 1.03e-30 116
Msa1179350 AT2G32460.2 50.459 109 49 2 30 134 2 109 1.12e-30 124
Msa1179350 AT5G59780.3 49.074 108 54 1 27 134 5 111 1.17e-30 119
Msa1179350 AT2G32460.1 46.429 112 59 1 23 134 11 121 1.23e-30 125
Msa1179350 AT3G06490.1 56.731 104 44 1 30 133 19 121 1.67e-30 121
Msa1179350 AT1G25340.1 50.485 103 50 1 32 134 20 121 7.24e-30 118
Msa1179350 AT3G46130.1 49.541 109 53 2 27 134 5 112 9.83e-30 117
Msa1179350 AT2G26950.1 46.364 110 58 1 20 129 6 114 1.53e-29 120
Msa1179350 AT3G27810.2 58.750 80 33 0 64 143 4 83 3.00e-29 114
Msa1179350 AT3G60460.1 52.830 106 48 2 25 129 6 110 7.07e-29 116
Msa1179350 AT5G49620.1 54.808 104 46 1 30 133 26 128 8.79e-29 116
Msa1179350 AT1G56650.1 54.128 109 49 1 26 134 4 111 1.98e-28 113
Msa1179350 AT5G40350.2 63.014 73 27 0 64 136 5 77 4.32e-28 110
Msa1179350 AT1G66390.1 53.211 109 50 1 26 134 4 111 9.05e-28 112
Msa1179350 AT5G14750.3 65.217 69 24 0 67 135 18 86 1.06e-27 109
Msa1179350 AT5G35550.2 64.865 74 26 0 62 135 48 121 4.86e-27 110
Msa1179350 AT5G40360.1 32.394 213 131 7 5 216 132 332 1.84e-26 110
Msa1179350 AT3G12820.2 61.972 71 27 0 67 137 2 72 1.52e-25 103
Msa1179350 AT5G49620.2 48.305 118 46 2 30 133 26 142 2.29e-25 107
Msa1179350 AT1G25340.2 47.573 103 48 2 32 134 20 116 3.20e-25 105
Msa1179350 AT1G25340.3 47.573 103 48 2 32 134 20 116 5.90e-25 105
Msa1179350 AT1G69560.1 42.742 124 67 2 14 135 87 208 1.48e-24 104
Msa1179350 AT1G69560.2 42.742 124 67 2 14 135 103 224 1.99e-24 104
Msa1179350 AT3G47600.2 50.000 94 42 1 42 135 22 110 2.26e-24 104
Msa1179350 AT3G46130.3 58.333 72 30 0 63 134 9 80 4.51e-24 100
Msa1179350 AT5G59780.2 59.155 71 29 0 64 134 20 90 1.11e-23 99.4
Msa1179350 AT3G46130.4 59.155 71 29 0 64 134 20 90 1.50e-23 99.8
Msa1179350 AT3G27785.1 40.323 124 70 3 8 130 165 285 1.55e-23 103
Msa1179350 AT3G53200.2 59.155 71 29 0 64 134 9 79 1.68e-23 98.6
Msa1179350 AT1G66380.3 59.740 77 31 0 58 134 2 78 2.34e-23 95.1
Msa1179350 AT4G18770.1 44.144 111 58 3 26 135 211 318 2.74e-23 102
Msa1179350 AT3G09370.1 32.407 216 128 6 32 238 130 336 6.19e-23 102
Msa1179350 AT3G09370.2 32.407 216 128 6 32 238 135 341 6.31e-23 102
Msa1179350 AT5G58850.1 44.231 104 54 3 32 134 105 205 7.21e-23 101
Msa1179350 AT5G11050.1 47.000 100 49 3 32 130 105 201 7.56e-23 101
Msa1179350 AT3G09370.3 32.407 216 128 6 32 238 143 349 1.17e-22 101
Msa1179350 AT5G02320.3 45.714 105 53 3 32 135 67 168 1.67e-22 100
Msa1179350 AT5G02320.1 45.714 105 53 3 32 135 127 228 1.67e-22 101
Msa1179350 AT5G02320.2 45.714 105 53 3 32 135 127 228 1.67e-22 101
Msa1179350 AT1G17950.1 46.667 105 50 4 32 134 5 105 8.16e-22 95.1
Msa1179350 AT5G11510.2 36.054 147 87 4 32 174 81 224 9.86e-22 99.8
Msa1179350 AT5G11510.5 36.054 147 87 4 32 174 81 224 1.06e-21 99.4
Msa1179350 AT5G11510.3 36.054 147 87 4 32 174 81 224 1.08e-21 99.8
Msa1179350 AT5G11510.1 36.054 147 87 4 32 174 81 224 1.08e-21 99.8
Msa1179350 AT5G11510.4 36.054 147 87 4 32 174 81 224 1.08e-21 99.8
Msa1179350 AT1G22640.3 63.636 66 24 0 77 142 1 66 1.19e-21 93.2
Msa1179350 AT1G26780.1 43.810 105 57 1 30 134 96 198 1.34e-21 95.1
Msa1179350 AT1G26780.2 43.810 105 57 1 30 134 96 198 1.44e-21 96.7
Msa1179350 AT1G73410.1 47.170 106 50 4 31 134 5 106 6.22e-21 92.4
Msa1179350 AT2G39880.1 42.308 130 70 4 6 134 25 150 6.36e-21 94.7
Msa1179350 AT1G18960.1 43.363 113 57 3 23 135 4 109 1.11e-20 93.2
Msa1179350 AT1G73410.2 47.170 106 50 4 31 134 5 106 1.63e-20 90.1
Msa1179350 AT5G67300.1 47.115 104 51 3 32 134 6 106 1.70e-20 92.4
Msa1179350 AT3G55730.1 49.038 104 49 3 32 134 56 156 1.91e-20 94.0
Msa1179350 AT2G25230.1 38.596 114 66 3 18 130 12 122 3.36e-20 90.1
Msa1179350 AT4G32730.5 43.810 105 55 3 32 135 87 188 4.06e-20 94.7
Msa1179350 AT4G32730.4 43.810 105 55 3 32 135 87 188 4.06e-20 94.7
Msa1179350 AT4G32730.3 43.810 105 55 3 32 135 87 188 4.06e-20 94.7
Msa1179350 AT4G32730.2 43.810 105 55 3 32 135 87 188 4.06e-20 94.7
Msa1179350 AT4G32730.1 43.925 107 56 3 32 137 87 190 4.21e-20 94.4
Msa1179350 AT3G09230.1 46.226 106 53 3 32 136 55 157 1.36e-19 91.3
Msa1179350 AT3G50060.1 35.758 165 84 5 32 191 6 153 1.46e-19 89.7
Msa1179350 AT5G14750.4 59.322 59 24 0 77 135 1 59 3.50e-19 84.3
Msa1179350 AT5G14750.2 59.322 59 24 0 77 135 1 59 3.50e-19 84.3
Msa1179350 AT4G37260.1 45.192 104 53 3 32 134 13 113 8.30e-19 87.8
Msa1179350 AT3G23250.2 59.322 59 24 0 77 135 1 59 2.99e-18 84.3
Msa1179350 AT2G23290.1 45.192 104 53 3 32 134 13 113 6.80e-18 85.1
Msa1179350 AT3G29020.2 39.623 106 60 3 31 135 66 168 7.14e-18 84.7
Msa1179350 AT3G29020.1 39.623 106 60 3 31 135 64 166 7.93e-18 83.2
Msa1179350 AT4G33450.1 45.000 100 51 3 27 125 14 110 8.36e-18 83.6
Msa1179350 AT1G66380.2 51.807 83 39 1 26 108 4 85 8.45e-18 79.7
Msa1179350 AT5G17800.1 35.659 129 80 3 7 134 67 193 1.03e-17 84.7
Msa1179350 AT2G02820.3 39.316 117 69 2 18 134 16 130 1.42e-17 84.3
Msa1179350 AT2G02820.1 39.316 117 69 2 18 134 16 130 1.44e-17 85.5
Msa1179350 AT2G02820.2 39.316 117 69 2 18 134 16 130 1.65e-17 85.5
Msa1179350 AT1G71030.2 50.000 74 37 0 70 143 5 78 1.73e-17 80.9
Msa1179350 AT4G00540.2 41.284 109 59 3 30 135 101 207 1.80e-17 84.7
Msa1179350 AT1G71030.1 50.000 74 37 0 70 143 19 92 2.48e-17 80.9
Msa1179350 AT4G00540.1 41.284 109 59 3 30 135 99 205 3.00e-17 84.3
Msa1179350 AT5G40430.1 37.383 107 62 3 25 130 47 149 9.45e-17 80.5
Msa1179350 AT1G14350.2 42.000 100 56 2 35 134 28 125 1.66e-15 79.0
Msa1179350 AT1G14350.1 42.000 100 56 2 35 134 28 125 1.66e-15 79.0
Msa1179350 AT2G37630.1 40.816 98 55 2 32 127 4 100 2.90e-14 74.7
Msa1179350 AT1G14350.3 50.000 60 30 0 75 134 23 82 1.84e-11 66.2
Msa1179350 AT1G14350.4 50.000 60 30 0 75 134 23 82 1.84e-11 66.2
Msa1179350 AT5G39700.1 32.308 130 83 3 14 140 38 165 2.25e-11 63.5
Msa1179350 AT4G25560.2 57.447 47 20 0 90 136 3 49 9.34e-11 62.0

Find 98 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCAATGTCAAGGAAAT+TGG 0.105747 8_1:-12730975 None:intergenic
AGTACTATTTCAGGTATAAT+TGG 0.212756 8_1:-12730560 None:intergenic
ACATTAGGGTTTGCATTTAA+AGG 0.217309 8_1:-12730398 None:intergenic
TGTCTACGTTTGTATCAATT+TGG 0.229657 8_1:-12730931 None:intergenic
TGGTGAAAACATTGCATATT+TGG 0.239301 8_1:-12730476 None:intergenic
CTTTGATAATTGACTAATTT+AGG 0.240485 8_1:-12730773 None:intergenic
ATCAAATACATCACAACTTA+TGG 0.251425 8_1:+12729223 Msa1179350:CDS
TTAGATGGTAGTACTATTTC+AGG 0.269039 8_1:-12730569 None:intergenic
GACTAATTGAGGCACAATAT+TGG 0.273377 8_1:-12731182 None:intergenic
ATAGAACTCCACCGCATTCT+AGG 0.277206 8_1:+12729537 Msa1179350:CDS
GATGATGATGATTGGAGTTT+AGG 0.296975 8_1:-12730856 None:intergenic
TTGAAGTTTAGCATCACATT+AGG 0.305458 8_1:-12730413 None:intergenic
TTATCCACAAGATCAAAATA+TGG 0.309059 8_1:+12731285 Msa1179350:CDS
ACTAATTGAGGCACAATATT+GGG 0.311757 8_1:-12731181 None:intergenic
ACCTCATTACCCGTTCTTCC+TGG 0.330087 8_1:-12730254 None:intergenic
AAACTTCCACGTTTCAAATC+AGG 0.335974 8_1:-12729489 None:intergenic
GGCACCACTCCATTTAATAT+TGG 0.337426 8_1:+12730680 Msa1179350:CDS
GGGAGGCGAATATCATAAAA+TGG 0.346205 8_1:-12730344 None:intergenic
CAAGGAAATTGGGATTATAA+TGG 0.353329 8_1:-12730964 None:intergenic
GATGTGTCACCAATATTAAA+TGG 0.364065 8_1:-12730689 None:intergenic
AGTTTGATGAATAAGTCTTT+TGG 0.370637 8_1:-12729098 None:intergenic
ACAAACCCTAGTATTCCTTT+AGG 0.376576 8_1:+12731388 Msa1179350:CDS
TTCTCAATGTCAAGGAAATT+GGG 0.377090 8_1:-12730974 None:intergenic
TGATCACAATCCAAATCAAT+TGG 0.394468 8_1:+12730637 Msa1179350:CDS
TTGTATTGTAATTAACTGTT+TGG 0.397259 8_1:-12731369 None:intergenic
TGTTGTGCCATTGATGCAAT+TGG 0.397345 8_1:-12731118 None:intergenic
AATGACCATGTATCTTCATC+AGG 0.398481 8_1:-12731019 None:intergenic
CCTTGGAATCAAATGAATCT+AGG 0.399640 8_1:-12731240 None:intergenic
TCACAAGAGGAAGGATTAGA+TGG 0.401191 8_1:-12730584 None:intergenic
CATCAATGTAATTATCCAAT+TGG 0.405881 8_1:-12731315 None:intergenic
GAGACGAGTTTGAAAGGTAT+AGG 0.406775 8_1:-12730454 None:intergenic
TTGTGAAAATACATGGTCAT+TGG 0.411595 8_1:+12730601 Msa1179350:CDS
TGAAGTTTAGCATCACATTA+GGG 0.421919 8_1:-12730412 None:intergenic
CTTTGATCATTGACTAATTG+AGG 0.425630 8_1:-12731193 None:intergenic
AAATATGGAAACTAACCAAT+TGG 0.425983 8_1:+12731300 Msa1179350:CDS
AGTCAACCCAATTGCATCAA+TGG 0.426518 8_1:+12731111 Msa1179350:CDS
ACTAAGAGCTTCATGTTCCT+TGG 0.426868 8_1:-12731257 None:intergenic
GTTTAGGATCACATGTTCCT+TGG 0.427075 8_1:-12730840 None:intergenic
TCCCATCCTAAAGGAATACT+AGG 0.429991 8_1:-12731394 None:intergenic
CCTAGATTCATTTGATTCCA+AGG 0.455369 8_1:+12731240 Msa1179350:CDS
TCATCAGGGAAAGGATTAGA+TGG 0.457767 8_1:-12731004 None:intergenic
AGTTCTGTTCCAAAACTTGC+TGG 0.464625 8_1:+12729262 Msa1179350:CDS
CTGATCTTGATGATGATGAT+TGG 0.467876 8_1:-12730864 None:intergenic
CGTTCTTCCTGGCAAGTGCT+TGG 0.469448 8_1:-12730243 None:intergenic
ACTGCTGCATTAATGAACTT+TGG 0.470384 8_1:-12730718 None:intergenic
ACCCTAGTATTCCTTTAGGA+TGG 0.470539 8_1:+12731392 Msa1179350:CDS
AAGCACTTGCCAGGAAGAAC+GGG 0.472251 8_1:+12730245 Msa1179350:CDS
GGAGGCGAATATCATAAAAT+GGG 0.472835 8_1:-12730343 None:intergenic
CAAATTGCCAAGCACTTGCC+AGG 0.478813 8_1:+12730236 Msa1179350:CDS
TCAATAATCATTTCAATGCC+AGG 0.480419 8_1:+12730519 Msa1179350:CDS
GTTGTGCCATTGATGCAATT+GGG 0.484555 8_1:-12731117 None:intergenic
ATAATTACATTGATGCCCTC+AGG 0.490476 8_1:+12731323 Msa1179350:CDS
CCCTAGTATTCCTTTAGGAT+GGG 0.495653 8_1:+12731393 Msa1179350:CDS
AACTATGGCTCCCATCCTAA+AGG 0.501906 8_1:-12731403 None:intergenic
CTTCCTCTTGTGAAAATACA+TGG 0.503376 8_1:+12730594 Msa1179350:CDS
GAAAGAGTTGCAGATTAAGA+TGG 0.506273 8_1:+12729451 Msa1179350:CDS
ACTGTTTGGCTGCTTGATGA+TGG 0.506778 8_1:-12731355 None:intergenic
AAGACTTATTCATCAAACTA+AGG 0.507972 8_1:+12729102 Msa1179350:CDS
TTTGAGATGAGGTTGGAAGG+TGG 0.509462 8_1:-12730889 None:intergenic
AATCTAGGATGCAACAATCA+TGG 0.523526 8_1:-12731225 None:intergenic
CTTATGGACATGATTGCTGC+TGG 0.523991 8_1:+12729239 Msa1179350:CDS
AGAAGGTCAACAGAGGACTA+TGG 0.528903 8_1:+12729176 Msa1179350:CDS
CGATTATTCATCTGATTCCA+AGG 0.530355 8_1:+12730823 Msa1179350:CDS
AAGAAACAAGACATCAATCA+TGG 0.532746 8_1:+12729129 Msa1179350:CDS
TGTCTACCACTGTACCAGTT+TGG 0.535360 8_1:-12730496 None:intergenic
AAAGGTATAGGTGATCTTGA+TGG 0.536116 8_1:-12730442 None:intergenic
CAAGCACTTGCCAGGAAGAA+CGG 0.539089 8_1:+12730244 Msa1179350:CDS
TCATAAAATGGGGTGAAGGA+TGG 0.540027 8_1:-12730332 None:intergenic
CTTTCCCTGATGAAGATACA+TGG 0.545218 8_1:+12731014 Msa1179350:CDS
CTAAGACCTGATTTGAAACG+TGG 0.553388 8_1:+12729483 Msa1179350:CDS
TATTTGGAGACGAGTTTGAA+AGG 0.553706 8_1:-12730460 None:intergenic
TGCAACAATCATGGTCCTCA+AGG 0.560058 8_1:-12731216 None:intergenic
ATGGAACAATATCATCAGAA+AGG 0.564185 8_1:-12730313 None:intergenic
TCCACCGCATTCTAGGCAAT+AGG 0.565568 8_1:+12729544 Msa1179350:CDS
GCCAGGAAGAACGGGTAATG+AGG 0.568173 8_1:+12730253 Msa1179350:CDS
ACCTCATCTCAAAATCTACA+AGG 0.569833 8_1:+12730899 Msa1179350:CDS
GTATTTGATTCTCAATGTCA+AGG 0.576272 8_1:-12730982 None:intergenic
TACATGGTCATTAGATTGTG+TGG 0.578377 8_1:+12731030 Msa1179350:CDS
CATGTATCTTCATCAGGGAA+AGG 0.587035 8_1:-12731013 None:intergenic
TGTGTAGGTTTGCAGAGATG+TGG 0.588209 8_1:+12729429 Msa1179350:intron
ATTGACTAATTTAGGCACAA+TGG 0.588637 8_1:-12730765 None:intergenic
AATATCATAAAATGGGGTGA+AGG 0.593772 8_1:-12730336 None:intergenic
TATAGGTGATCTTGATGGTG+AGG 0.593802 8_1:-12730437 None:intergenic
TGCTACATGCATAATCCTCA+AGG 0.602722 8_1:-12730796 None:intergenic
CTCTTGCTGTAGCAAAGAGA+AGG 0.605264 8_1:+12729159 Msa1179350:CDS
ATGACCATGTATCTTCATCA+GGG 0.622631 8_1:-12731018 None:intergenic
AGTCAATTATCAAAGCCTTG+AGG 0.626698 8_1:+12730781 Msa1179350:CDS
ACCTATTGCCTAGAATGCGG+TGG 0.629249 8_1:-12729545 None:intergenic
CCCATCCTAAAGGAATACTA+GGG 0.646201 8_1:-12731393 None:intergenic
GTCACCAATATTAAATGGAG+TGG 0.646540 8_1:-12730684 None:intergenic
AGTCAATGATCAAAGCCTTG+AGG 0.663412 8_1:+12731201 Msa1179350:CDS
TCAATGTCATGATCATCACT+TGG 0.687505 8_1:+12731147 Msa1179350:CDS
TGGAATCAGATGAATAATCG+AGG 0.688424 8_1:-12730820 None:intergenic
AGCAAAGAGAAGGTCAACAG+AGG 0.693727 8_1:+12729169 Msa1179350:CDS
TATACCTATTGCCTAGAATG+CGG 0.693771 8_1:-12729548 None:intergenic
ATGATGGCAATGAAAACCTG+AGG 0.700721 8_1:-12731339 None:intergenic
GAGGCGAATATCATAAAATG+GGG 0.714105 8_1:-12730342 None:intergenic
TGATGGCAATGAAAACCTGA+GGG 0.740418 8_1:-12731338 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATTAGTATATATAG+TGG - chr8_1:12729307-12729326 None:intergenic 10.0%
!!! AAAAAAGAAAGTATTTATTT+AGG - chr8_1:12730095-12730114 None:intergenic 10.0%
!!! ATAAATACTTTCTTTTTTTT+TGG + chr8_1:12730097-12730116 Msa1179350:intron 10.0%
!! AAAAAAATTAGTATATATAG+TGG - chr8_1:12729307-12729326 None:intergenic 10.0%
!!! AAAAAAGAAAGTATTTATTT+AGG - chr8_1:12730095-12730114 None:intergenic 10.0%
!!! ATAAATACTTTCTTTTTTTT+TGG + chr8_1:12730097-12730116 Msa1179350:intron 10.0%
!! TAAGGAAAAAAAAAAAAGTA+TGG - chr8_1:12729379-12729398 None:intergenic 15.0%
!! TAAGGAAAAAAAAAAAAGTA+TGG - chr8_1:12729379-12729398 None:intergenic 15.0%
!!! GAAAAAAAAAAAAGTATGGA+CGG - chr8_1:12729375-12729394 None:intergenic 20.0%
!! AACAGATGAACAATATAATA+AGG - chr8_1:12729397-12729416 None:intergenic 20.0%
!! ATTGACATGAAAATAAACAT+TGG - chr8_1:12729608-12729627 None:intergenic 20.0%
!!! TGAACTTTGAGAATAATAAA+TGG - chr8_1:12729636-12729655 None:intergenic 20.0%
!! TATTATTCTCAAAGTTCAAA+AGG + chr8_1:12729638-12729657 Msa1179350:intron 20.0%
!! CAAAATATACAAAGAAGTTT+AGG - chr8_1:12729869-12729888 None:intergenic 20.0%
!!! CTAAACTTCTTTGTATATTT+TGG + chr8_1:12729867-12729886 Msa1179350:intron 20.0%
!! TTACACATATTAAAGATTAG+AGG - chr8_1:12729938-12729957 None:intergenic 20.0%
!!! TTAGAATGACACTTATTTTA+AGG + chr8_1:12729964-12729983 Msa1179350:intron 20.0%
!!! TAGAATGACACTTATTTTAA+GGG + chr8_1:12729965-12729984 Msa1179350:intron 20.0%
!!! CAATCTTTTGAGAAATAAAT+TGG - chr8_1:12730060-12730079 None:intergenic 20.0%
!!! ATTTGATTTTCCAATTGATT+TGG - chr8_1:12730650-12730669 None:intergenic 20.0%
!! GAAAATCAAATTTCAAAAAG+TGG + chr8_1:12730659-12730678 Msa1179350:CDS 20.0%
!!! CTTTGATAATTGACTAATTT+AGG - chr8_1:12730776-12730795 None:intergenic 20.0%
!! TTGTATTGTAATTAACTGTT+TGG - chr8_1:12731372-12731391 None:intergenic 20.0%
!!! GAAAAAAAAAAAAGTATGGA+CGG - chr8_1:12729375-12729394 None:intergenic 20.0%
!! AACAGATGAACAATATAATA+AGG - chr8_1:12729397-12729416 None:intergenic 20.0%
!! ATTGACATGAAAATAAACAT+TGG - chr8_1:12729608-12729627 None:intergenic 20.0%
!!! TGAACTTTGAGAATAATAAA+TGG - chr8_1:12729636-12729655 None:intergenic 20.0%
!! TATTATTCTCAAAGTTCAAA+AGG + chr8_1:12729638-12729657 Msa1179350:intron 20.0%
!! CAAAATATACAAAGAAGTTT+AGG - chr8_1:12729869-12729888 None:intergenic 20.0%
!!! CTAAACTTCTTTGTATATTT+TGG + chr8_1:12729867-12729886 Msa1179350:intron 20.0%
!! TTACACATATTAAAGATTAG+AGG - chr8_1:12729938-12729957 None:intergenic 20.0%
!!! TTAGAATGACACTTATTTTA+AGG + chr8_1:12729964-12729983 Msa1179350:intron 20.0%
!!! TAGAATGACACTTATTTTAA+GGG + chr8_1:12729965-12729984 Msa1179350:intron 20.0%
!!! CAATCTTTTGAGAAATAAAT+TGG - chr8_1:12730060-12730079 None:intergenic 20.0%
!!! ATTTGATTTTCCAATTGATT+TGG - chr8_1:12730650-12730669 None:intergenic 20.0%
!! GAAAATCAAATTTCAAAAAG+TGG + chr8_1:12730659-12730678 Msa1179350:CDS 20.0%
!!! CTTTGATAATTGACTAATTT+AGG - chr8_1:12730776-12730795 None:intergenic 20.0%
!! TTGTATTGTAATTAACTGTT+TGG - chr8_1:12731372-12731391 None:intergenic 20.0%
!! AGTTTGATGAATAAGTCTTT+TGG - chr8_1:12729101-12729120 None:intergenic 25.0%
! AAGACTTATTCATCAAACTA+AGG + chr8_1:12729102-12729121 Msa1179350:CDS 25.0%
! ATCAAATACATCACAACTTA+TGG + chr8_1:12729223-12729242 Msa1179350:CDS 25.0%
! AAAGAGCTATATTGTAGTAA+TGG - chr8_1:12729575-12729594 None:intergenic 25.0%
! TCACAAAAGTTGTCAAAAAA+TGG - chr8_1:12729774-12729793 None:intergenic 25.0%
!! ATTTGAACAATCCTTTTGTT+TGG - chr8_1:12729909-12729928 None:intergenic 25.0%
!!! AAATGTTAATTTGTGCCTTA+GGG + chr8_1:12729988-12730007 Msa1179350:intron 25.0%
! CAATGCAAAAATTCTATCTT+GGG - chr8_1:12730028-12730047 None:intergenic 25.0%
!!! CACTTTCCGTTTTAAAATAA+GGG - chr8_1:12730162-12730181 None:intergenic 25.0%
!!! ACACTTTCCGTTTTAAAATA+AGG - chr8_1:12730163-12730182 None:intergenic 25.0%
!!! GGTATAATTGGATTTTGATT+GGG - chr8_1:12730551-12730570 None:intergenic 25.0%
!!! AGGTATAATTGGATTTTGAT+TGG - chr8_1:12730552-12730571 None:intergenic 25.0%
!! AGTACTATTTCAGGTATAAT+TGG - chr8_1:12730563-12730582 None:intergenic 25.0%
! TTATCCACAAGATCAAAATA+TGG + chr8_1:12731285-12731304 Msa1179350:CDS 25.0%
! AAATATGGAAACTAACCAAT+TGG + chr8_1:12731300-12731319 Msa1179350:CDS 25.0%
! CATCAATGTAATTATCCAAT+TGG - chr8_1:12731318-12731337 None:intergenic 25.0%
!! AGTTTGATGAATAAGTCTTT+TGG - chr8_1:12729101-12729120 None:intergenic 25.0%
! AAGACTTATTCATCAAACTA+AGG + chr8_1:12729102-12729121 Msa1179350:CDS 25.0%
! ATCAAATACATCACAACTTA+TGG + chr8_1:12729223-12729242 Msa1179350:CDS 25.0%
! AAAGAGCTATATTGTAGTAA+TGG - chr8_1:12729575-12729594 None:intergenic 25.0%
! TCACAAAAGTTGTCAAAAAA+TGG - chr8_1:12729774-12729793 None:intergenic 25.0%
!! ATTTGAACAATCCTTTTGTT+TGG - chr8_1:12729909-12729928 None:intergenic 25.0%
!!! AAATGTTAATTTGTGCCTTA+GGG + chr8_1:12729988-12730007 Msa1179350:intron 25.0%
! CAATGCAAAAATTCTATCTT+GGG - chr8_1:12730028-12730047 None:intergenic 25.0%
!!! CACTTTCCGTTTTAAAATAA+GGG - chr8_1:12730162-12730181 None:intergenic 25.0%
!!! ACACTTTCCGTTTTAAAATA+AGG - chr8_1:12730163-12730182 None:intergenic 25.0%
!!! GGTATAATTGGATTTTGATT+GGG - chr8_1:12730551-12730570 None:intergenic 25.0%
!!! AGGTATAATTGGATTTTGAT+TGG - chr8_1:12730552-12730571 None:intergenic 25.0%
!! AGTACTATTTCAGGTATAAT+TGG - chr8_1:12730563-12730582 None:intergenic 25.0%
! TTATCCACAAGATCAAAATA+TGG + chr8_1:12731285-12731304 Msa1179350:CDS 25.0%
! AAATATGGAAACTAACCAAT+TGG + chr8_1:12731300-12731319 Msa1179350:CDS 25.0%
! CATCAATGTAATTATCCAAT+TGG - chr8_1:12731318-12731337 None:intergenic 25.0%
AAGAAACAAGACATCAATCA+TGG + chr8_1:12729129-12729148 Msa1179350:CDS 30.0%
! ATGAGTTTTTCATCTTCTTC+AGG - chr8_1:12729205-12729224 None:intergenic 30.0%
GTTTATATCATGATGTGTGT+AGG + chr8_1:12729414-12729433 Msa1179350:intron 30.0%
! AAGGTTGATTATACTCTTTC+CGG + chr8_1:12729657-12729676 Msa1179350:intron 30.0%
!!! AAGTGTCTCTCTTTTTCAAT+TGG + chr8_1:12729688-12729707 Msa1179350:intron 30.0%
CAAAAAGTTGTCCAAACAAA+AGG + chr8_1:12729895-12729914 Msa1179350:intron 30.0%
!! GAAATGTTAATTTGTGCCTT+AGG + chr8_1:12729987-12730006 Msa1179350:intron 30.0%
GTATATTAATATGTGCCCTA+AGG - chr8_1:12730006-12730025 None:intergenic 30.0%
CCAATGCAAAAATTCTATCT+TGG - chr8_1:12730029-12730048 None:intergenic 30.0%
! CCAAGATAGAATTTTTGCAT+TGG + chr8_1:12730026-12730045 Msa1179350:intron 30.0%
!!! GCATGACCCTTATTTTAAAA+CGG + chr8_1:12730153-12730172 Msa1179350:intron 30.0%
ACAAGTTTAAACCTTGTCAA+GGG - chr8_1:12730201-12730220 None:intergenic 30.0%
AACAAGTTTAAACCTTGTCA+AGG - chr8_1:12730202-12730221 None:intergenic 30.0%
! TGACAAGGTTTAAACTTGTT+TGG + chr8_1:12730202-12730221 Msa1179350:intron 30.0%
! TTTAAACTTGTTTGGACAGA+TGG + chr8_1:12730210-12730229 Msa1179350:intron 30.0%
! GTAATGAGGTGAAAAACTTT+TGG + chr8_1:12730267-12730286 Msa1179350:CDS 30.0%
ATGGAACAATATCATCAGAA+AGG - chr8_1:12730316-12730335 None:intergenic 30.0%
AATATCATAAAATGGGGTGA+AGG - chr8_1:12730339-12730358 None:intergenic 30.0%
ACATTAGGGTTTGCATTTAA+AGG - chr8_1:12730401-12730420 None:intergenic 30.0%
TGAAGTTTAGCATCACATTA+GGG - chr8_1:12730415-12730434 None:intergenic 30.0%
TTGAAGTTTAGCATCACATT+AGG - chr8_1:12730416-12730435 None:intergenic 30.0%
TGGTGAAAACATTGCATATT+TGG - chr8_1:12730479-12730498 None:intergenic 30.0%
TCAATAATCATTTCAATGCC+AGG + chr8_1:12730519-12730538 Msa1179350:CDS 30.0%
!!! TAATTGGATTTTGATTGGGT+AGG - chr8_1:12730547-12730566 None:intergenic 30.0%
TTAGATGGTAGTACTATTTC+AGG - chr8_1:12730572-12730591 None:intergenic 30.0%
TTGTGAAAATACATGGTCAT+TGG + chr8_1:12730601-12730620 Msa1179350:CDS 30.0%
TGATCACAATCCAAATCAAT+TGG + chr8_1:12730637-12730656 Msa1179350:CDS 30.0%
GATGTGTCACCAATATTAAA+TGG - chr8_1:12730692-12730711 None:intergenic 30.0%
ATTGACTAATTTAGGCACAA+TGG - chr8_1:12730768-12730787 None:intergenic 30.0%
TGTCTACGTTTGTATCAATT+TGG - chr8_1:12730934-12730953 None:intergenic 30.0%
CAAGGAAATTGGGATTATAA+TGG - chr8_1:12730967-12730986 None:intergenic 30.0%
TTCTCAATGTCAAGGAAATT+GGG - chr8_1:12730977-12730996 None:intergenic 30.0%
ATTCTCAATGTCAAGGAAAT+TGG - chr8_1:12730978-12730997 None:intergenic 30.0%
GTATTTGATTCTCAATGTCA+AGG - chr8_1:12730985-12731004 None:intergenic 30.0%
!! GTTGACTAAATTGTTTTGCT+GGG - chr8_1:12731098-12731117 None:intergenic 30.0%
ACTAATTGAGGCACAATATT+GGG - chr8_1:12731184-12731203 None:intergenic 30.0%
! CTTTGATCATTGACTAATTG+AGG - chr8_1:12731196-12731215 None:intergenic 30.0%
!!! GTTTCCATATTTTGATCTTG+TGG - chr8_1:12731292-12731311 None:intergenic 30.0%
AAGAAACAAGACATCAATCA+TGG + chr8_1:12729129-12729148 Msa1179350:CDS 30.0%
! ATGAGTTTTTCATCTTCTTC+AGG - chr8_1:12729205-12729224 None:intergenic 30.0%
GTTTATATCATGATGTGTGT+AGG + chr8_1:12729414-12729433 Msa1179350:intron 30.0%
! AAGGTTGATTATACTCTTTC+CGG + chr8_1:12729657-12729676 Msa1179350:intron 30.0%
!!! AAGTGTCTCTCTTTTTCAAT+TGG + chr8_1:12729688-12729707 Msa1179350:intron 30.0%
CAAAAAGTTGTCCAAACAAA+AGG + chr8_1:12729895-12729914 Msa1179350:intron 30.0%
!! GAAATGTTAATTTGTGCCTT+AGG + chr8_1:12729987-12730006 Msa1179350:intron 30.0%
GTATATTAATATGTGCCCTA+AGG - chr8_1:12730006-12730025 None:intergenic 30.0%
CCAATGCAAAAATTCTATCT+TGG - chr8_1:12730029-12730048 None:intergenic 30.0%
! CCAAGATAGAATTTTTGCAT+TGG + chr8_1:12730026-12730045 Msa1179350:intron 30.0%
!!! GCATGACCCTTATTTTAAAA+CGG + chr8_1:12730153-12730172 Msa1179350:intron 30.0%
ACAAGTTTAAACCTTGTCAA+GGG - chr8_1:12730201-12730220 None:intergenic 30.0%
AACAAGTTTAAACCTTGTCA+AGG - chr8_1:12730202-12730221 None:intergenic 30.0%
! TGACAAGGTTTAAACTTGTT+TGG + chr8_1:12730202-12730221 Msa1179350:intron 30.0%
! TTTAAACTTGTTTGGACAGA+TGG + chr8_1:12730210-12730229 Msa1179350:intron 30.0%
! GTAATGAGGTGAAAAACTTT+TGG + chr8_1:12730267-12730286 Msa1179350:CDS 30.0%
ATGGAACAATATCATCAGAA+AGG - chr8_1:12730316-12730335 None:intergenic 30.0%
AATATCATAAAATGGGGTGA+AGG - chr8_1:12730339-12730358 None:intergenic 30.0%
ACATTAGGGTTTGCATTTAA+AGG - chr8_1:12730401-12730420 None:intergenic 30.0%
TGAAGTTTAGCATCACATTA+GGG - chr8_1:12730415-12730434 None:intergenic 30.0%
TTGAAGTTTAGCATCACATT+AGG - chr8_1:12730416-12730435 None:intergenic 30.0%
TGGTGAAAACATTGCATATT+TGG - chr8_1:12730479-12730498 None:intergenic 30.0%
TCAATAATCATTTCAATGCC+AGG + chr8_1:12730519-12730538 Msa1179350:CDS 30.0%
!!! TAATTGGATTTTGATTGGGT+AGG - chr8_1:12730547-12730566 None:intergenic 30.0%
TTAGATGGTAGTACTATTTC+AGG - chr8_1:12730572-12730591 None:intergenic 30.0%
TTGTGAAAATACATGGTCAT+TGG + chr8_1:12730601-12730620 Msa1179350:CDS 30.0%
TGATCACAATCCAAATCAAT+TGG + chr8_1:12730637-12730656 Msa1179350:CDS 30.0%
GATGTGTCACCAATATTAAA+TGG - chr8_1:12730692-12730711 None:intergenic 30.0%
ATTGACTAATTTAGGCACAA+TGG - chr8_1:12730768-12730787 None:intergenic 30.0%
TGTCTACGTTTGTATCAATT+TGG - chr8_1:12730934-12730953 None:intergenic 30.0%
CAAGGAAATTGGGATTATAA+TGG - chr8_1:12730967-12730986 None:intergenic 30.0%
TTCTCAATGTCAAGGAAATT+GGG - chr8_1:12730977-12730996 None:intergenic 30.0%
ATTCTCAATGTCAAGGAAAT+TGG - chr8_1:12730978-12730997 None:intergenic 30.0%
GTATTTGATTCTCAATGTCA+AGG - chr8_1:12730985-12731004 None:intergenic 30.0%
!! GTTGACTAAATTGTTTTGCT+GGG - chr8_1:12731098-12731117 None:intergenic 30.0%
ACTAATTGAGGCACAATATT+GGG - chr8_1:12731184-12731203 None:intergenic 30.0%
! CTTTGATCATTGACTAATTG+AGG - chr8_1:12731196-12731215 None:intergenic 30.0%
!!! GTTTCCATATTTTGATCTTG+TGG - chr8_1:12731292-12731311 None:intergenic 30.0%
! CTTTTAGTACCAGCAAGTTT+TGG - chr8_1:12729274-12729293 None:intergenic 35.0%
GAAAGAGTTGCAGATTAAGA+TGG + chr8_1:12729451-12729470 Msa1179350:CDS 35.0%
AAACTTCCACGTTTCAAATC+AGG - chr8_1:12729492-12729511 None:intergenic 35.0%
TATACCTATTGCCTAGAATG+CGG - chr8_1:12729551-12729570 None:intergenic 35.0%
! GAGAGACACTTATTTGAAAC+CGG - chr8_1:12729679-12729698 None:intergenic 35.0%
TTTCTCTCTCTCTATTGCTT+TGG + chr8_1:12729829-12729848 Msa1179350:intron 35.0%
AAACTTTAACATGTGCCCTT+AGG + chr8_1:12730120-12730139 Msa1179350:intron 35.0%
AACTTTAACATGTGCCCTTA+GGG + chr8_1:12730121-12730140 Msa1179350:intron 35.0%
!! TATCCATTTTTCCCTTGACA+AGG + chr8_1:12730187-12730206 Msa1179350:intron 35.0%
AAACCTTGTCAAGGGAAAAA+TGG - chr8_1:12730193-12730212 None:intergenic 35.0%
GAGGCGAATATCATAAAATG+GGG - chr8_1:12730345-12730364 None:intergenic 35.0%
GGAGGCGAATATCATAAAAT+GGG - chr8_1:12730346-12730365 None:intergenic 35.0%
TCCTTAAAAACAGCGTTGTA+GGG - chr8_1:12730368-12730387 None:intergenic 35.0%
TTCCTTAAAAACAGCGTTGT+AGG - chr8_1:12730369-12730388 None:intergenic 35.0%
! AAAGGTATAGGTGATCTTGA+TGG - chr8_1:12730445-12730464 None:intergenic 35.0%
TATTTGGAGACGAGTTTGAA+AGG - chr8_1:12730463-12730482 None:intergenic 35.0%
! ATGCAATGTTTTCACCAAAC+TGG + chr8_1:12730482-12730501 Msa1179350:CDS 35.0%
! CATGTATTTTCACAAGAGGA+AGG - chr8_1:12730596-12730615 None:intergenic 35.0%
CTTCCTCTTGTGAAAATACA+TGG + chr8_1:12730594-12730613 Msa1179350:CDS 35.0%
! TGACCATGTATTTTCACAAG+AGG - chr8_1:12730600-12730619 None:intergenic 35.0%
GTCACCAATATTAAATGGAG+TGG - chr8_1:12730687-12730706 None:intergenic 35.0%
ACTGCTGCATTAATGAACTT+TGG - chr8_1:12730721-12730740 None:intergenic 35.0%
AGTCAATTATCAAAGCCTTG+AGG + chr8_1:12730781-12730800 Msa1179350:CDS 35.0%
TGGAATCAGATGAATAATCG+AGG - chr8_1:12730823-12730842 None:intergenic 35.0%
CGATTATTCATCTGATTCCA+AGG + chr8_1:12730823-12730842 Msa1179350:CDS 35.0%
! GATGATGATGATTGGAGTTT+AGG - chr8_1:12730859-12730878 None:intergenic 35.0%
!! CTGATCTTGATGATGATGAT+TGG - chr8_1:12730867-12730886 None:intergenic 35.0%
!!! TGTAGATTTTGAGATGAGGT+TGG - chr8_1:12730899-12730918 None:intergenic 35.0%
ACCTCATCTCAAAATCTACA+AGG + chr8_1:12730899-12730918 Msa1179350:CDS 35.0%
!!! TCCTTGTAGATTTTGAGATG+AGG - chr8_1:12730903-12730922 None:intergenic 35.0%
ATGACCATGTATCTTCATCA+GGG - chr8_1:12731021-12731040 None:intergenic 35.0%
AATGACCATGTATCTTCATC+AGG - chr8_1:12731022-12731041 None:intergenic 35.0%
TACATGGTCATTAGATTGTG+TGG + chr8_1:12731030-12731049 Msa1179350:CDS 35.0%
! TTTTGCTGGGTAGTATAACT+TGG - chr8_1:12731085-12731104 None:intergenic 35.0%
!! GGTTGACTAAATTGTTTTGC+TGG - chr8_1:12731099-12731118 None:intergenic 35.0%
TCAATGTCATGATCATCACT+TGG + chr8_1:12731147-12731166 Msa1179350:CDS 35.0%
GACTAATTGAGGCACAATAT+TGG - chr8_1:12731185-12731204 None:intergenic 35.0%
! AATCTAGGATGCAACAATCA+TGG - chr8_1:12731228-12731247 None:intergenic 35.0%
CCTTGGAATCAAATGAATCT+AGG - chr8_1:12731243-12731262 None:intergenic 35.0%
CCTAGATTCATTTGATTCCA+AGG + chr8_1:12731240-12731259 Msa1179350:CDS 35.0%
ATAATTACATTGATGCCCTC+AGG + chr8_1:12731323-12731342 Msa1179350:CDS 35.0%
ACAAACCCTAGTATTCCTTT+AGG + chr8_1:12731388-12731407 Msa1179350:CDS 35.0%
! CTTTTAGTACCAGCAAGTTT+TGG - chr8_1:12729274-12729293 None:intergenic 35.0%
GAAAGAGTTGCAGATTAAGA+TGG + chr8_1:12729451-12729470 Msa1179350:CDS 35.0%
AAACTTCCACGTTTCAAATC+AGG - chr8_1:12729492-12729511 None:intergenic 35.0%
TATACCTATTGCCTAGAATG+CGG - chr8_1:12729551-12729570 None:intergenic 35.0%
! GAGAGACACTTATTTGAAAC+CGG - chr8_1:12729679-12729698 None:intergenic 35.0%
TTTCTCTCTCTCTATTGCTT+TGG + chr8_1:12729829-12729848 Msa1179350:intron 35.0%
AAACTTTAACATGTGCCCTT+AGG + chr8_1:12730120-12730139 Msa1179350:intron 35.0%
AACTTTAACATGTGCCCTTA+GGG + chr8_1:12730121-12730140 Msa1179350:intron 35.0%
!! TATCCATTTTTCCCTTGACA+AGG + chr8_1:12730187-12730206 Msa1179350:intron 35.0%
AAACCTTGTCAAGGGAAAAA+TGG - chr8_1:12730193-12730212 None:intergenic 35.0%
GAGGCGAATATCATAAAATG+GGG - chr8_1:12730345-12730364 None:intergenic 35.0%
GGAGGCGAATATCATAAAAT+GGG - chr8_1:12730346-12730365 None:intergenic 35.0%
TCCTTAAAAACAGCGTTGTA+GGG - chr8_1:12730368-12730387 None:intergenic 35.0%
TTCCTTAAAAACAGCGTTGT+AGG - chr8_1:12730369-12730388 None:intergenic 35.0%
! AAAGGTATAGGTGATCTTGA+TGG - chr8_1:12730445-12730464 None:intergenic 35.0%
TATTTGGAGACGAGTTTGAA+AGG - chr8_1:12730463-12730482 None:intergenic 35.0%
! ATGCAATGTTTTCACCAAAC+TGG + chr8_1:12730482-12730501 Msa1179350:CDS 35.0%
! CATGTATTTTCACAAGAGGA+AGG - chr8_1:12730596-12730615 None:intergenic 35.0%
CTTCCTCTTGTGAAAATACA+TGG + chr8_1:12730594-12730613 Msa1179350:CDS 35.0%
! TGACCATGTATTTTCACAAG+AGG - chr8_1:12730600-12730619 None:intergenic 35.0%
GTCACCAATATTAAATGGAG+TGG - chr8_1:12730687-12730706 None:intergenic 35.0%
ACTGCTGCATTAATGAACTT+TGG - chr8_1:12730721-12730740 None:intergenic 35.0%
AGTCAATTATCAAAGCCTTG+AGG + chr8_1:12730781-12730800 Msa1179350:CDS 35.0%
TGGAATCAGATGAATAATCG+AGG - chr8_1:12730823-12730842 None:intergenic 35.0%
CGATTATTCATCTGATTCCA+AGG + chr8_1:12730823-12730842 Msa1179350:CDS 35.0%
! GATGATGATGATTGGAGTTT+AGG - chr8_1:12730859-12730878 None:intergenic 35.0%
!! CTGATCTTGATGATGATGAT+TGG - chr8_1:12730867-12730886 None:intergenic 35.0%
!!! TGTAGATTTTGAGATGAGGT+TGG - chr8_1:12730899-12730918 None:intergenic 35.0%
ACCTCATCTCAAAATCTACA+AGG + chr8_1:12730899-12730918 Msa1179350:CDS 35.0%
!!! TCCTTGTAGATTTTGAGATG+AGG - chr8_1:12730903-12730922 None:intergenic 35.0%
ATGACCATGTATCTTCATCA+GGG - chr8_1:12731021-12731040 None:intergenic 35.0%
AATGACCATGTATCTTCATC+AGG - chr8_1:12731022-12731041 None:intergenic 35.0%
TACATGGTCATTAGATTGTG+TGG + chr8_1:12731030-12731049 Msa1179350:CDS 35.0%
! TTTTGCTGGGTAGTATAACT+TGG - chr8_1:12731085-12731104 None:intergenic 35.0%
!! GGTTGACTAAATTGTTTTGC+TGG - chr8_1:12731099-12731118 None:intergenic 35.0%
TCAATGTCATGATCATCACT+TGG + chr8_1:12731147-12731166 Msa1179350:CDS 35.0%
GACTAATTGAGGCACAATAT+TGG - chr8_1:12731185-12731204 None:intergenic 35.0%
! AATCTAGGATGCAACAATCA+TGG - chr8_1:12731228-12731247 None:intergenic 35.0%
CCTTGGAATCAAATGAATCT+AGG - chr8_1:12731243-12731262 None:intergenic 35.0%
CCTAGATTCATTTGATTCCA+AGG + chr8_1:12731240-12731259 Msa1179350:CDS 35.0%
ATAATTACATTGATGCCCTC+AGG + chr8_1:12731323-12731342 Msa1179350:CDS 35.0%
ACAAACCCTAGTATTCCTTT+AGG + chr8_1:12731388-12731407 Msa1179350:CDS 35.0%
AGTTCTGTTCCAAAACTTGC+TGG + chr8_1:12729262-12729281 Msa1179350:CDS 40.0%
! CTAAGACCTGATTTGAAACG+TGG + chr8_1:12729483-12729502 Msa1179350:CDS 40.0%
TCATAAAATGGGGTGAAGGA+TGG - chr8_1:12730335-12730354 None:intergenic 40.0%
GGGAGGCGAATATCATAAAA+TGG - chr8_1:12730347-12730366 None:intergenic 40.0%
CCTTAAAAACAGCGTTGTAG+GGG - chr8_1:12730367-12730386 None:intergenic 40.0%
!! TATAGGTGATCTTGATGGTG+AGG - chr8_1:12730440-12730459 None:intergenic 40.0%
! GAGACGAGTTTGAAAGGTAT+AGG - chr8_1:12730457-12730476 None:intergenic 40.0%
! TTTTCACCAAACTGGTACAG+TGG + chr8_1:12730490-12730509 Msa1179350:CDS 40.0%
!!! ATTTTGATTGGGTAGGAACC+TGG - chr8_1:12730540-12730559 None:intergenic 40.0%
TCACAAGAGGAAGGATTAGA+TGG - chr8_1:12730587-12730606 None:intergenic 40.0%
GGCACCACTCCATTTAATAT+TGG + chr8_1:12730680-12730699 Msa1179350:CDS 40.0%
TGCTACATGCATAATCCTCA+AGG - chr8_1:12730799-12730818 None:intergenic 40.0%
! GTTTAGGATCACATGTTCCT+TGG - chr8_1:12730843-12730862 None:intergenic 40.0%
!!! GATTTTGAGATGAGGTTGGA+AGG - chr8_1:12730895-12730914 None:intergenic 40.0%
TCATCAGGGAAAGGATTAGA+TGG - chr8_1:12731007-12731026 None:intergenic 40.0%
CATGTATCTTCATCAGGGAA+AGG - chr8_1:12731016-12731035 None:intergenic 40.0%
CTTTCCCTGATGAAGATACA+TGG + chr8_1:12731014-12731033 Msa1179350:CDS 40.0%
AGTCAACCCAATTGCATCAA+TGG + chr8_1:12731111-12731130 Msa1179350:CDS 40.0%
! GTTGTGCCATTGATGCAATT+GGG - chr8_1:12731120-12731139 None:intergenic 40.0%
! TGTTGTGCCATTGATGCAAT+TGG - chr8_1:12731121-12731140 None:intergenic 40.0%
AGTCAATGATCAAAGCCTTG+AGG + chr8_1:12731201-12731220 Msa1179350:CDS 40.0%
ACTAAGAGCTTCATGTTCCT+TGG - chr8_1:12731260-12731279 None:intergenic 40.0%
TGATGGCAATGAAAACCTGA+GGG - chr8_1:12731341-12731360 None:intergenic 40.0%
ATGATGGCAATGAAAACCTG+AGG - chr8_1:12731342-12731361 None:intergenic 40.0%
! ACCCTAGTATTCCTTTAGGA+TGG + chr8_1:12731392-12731411 Msa1179350:CDS 40.0%
CCCATCCTAAAGGAATACTA+GGG - chr8_1:12731396-12731415 None:intergenic 40.0%
!! CCCTAGTATTCCTTTAGGAT+GGG + chr8_1:12731393-12731412 Msa1179350:CDS 40.0%
TCCCATCCTAAAGGAATACT+AGG - chr8_1:12731397-12731416 None:intergenic 40.0%
AGTTCTGTTCCAAAACTTGC+TGG + chr8_1:12729262-12729281 Msa1179350:CDS 40.0%
! CTAAGACCTGATTTGAAACG+TGG + chr8_1:12729483-12729502 Msa1179350:CDS 40.0%
TCATAAAATGGGGTGAAGGA+TGG - chr8_1:12730335-12730354 None:intergenic 40.0%
GGGAGGCGAATATCATAAAA+TGG - chr8_1:12730347-12730366 None:intergenic 40.0%
CCTTAAAAACAGCGTTGTAG+GGG - chr8_1:12730367-12730386 None:intergenic 40.0%
!! TATAGGTGATCTTGATGGTG+AGG - chr8_1:12730440-12730459 None:intergenic 40.0%
! GAGACGAGTTTGAAAGGTAT+AGG - chr8_1:12730457-12730476 None:intergenic 40.0%
! TTTTCACCAAACTGGTACAG+TGG + chr8_1:12730490-12730509 Msa1179350:CDS 40.0%
!!! ATTTTGATTGGGTAGGAACC+TGG - chr8_1:12730540-12730559 None:intergenic 40.0%
TCACAAGAGGAAGGATTAGA+TGG - chr8_1:12730587-12730606 None:intergenic 40.0%
GGCACCACTCCATTTAATAT+TGG + chr8_1:12730680-12730699 Msa1179350:CDS 40.0%
TGCTACATGCATAATCCTCA+AGG - chr8_1:12730799-12730818 None:intergenic 40.0%
! GTTTAGGATCACATGTTCCT+TGG - chr8_1:12730843-12730862 None:intergenic 40.0%
!!! GATTTTGAGATGAGGTTGGA+AGG - chr8_1:12730895-12730914 None:intergenic 40.0%
TCATCAGGGAAAGGATTAGA+TGG - chr8_1:12731007-12731026 None:intergenic 40.0%
CATGTATCTTCATCAGGGAA+AGG - chr8_1:12731016-12731035 None:intergenic 40.0%
CTTTCCCTGATGAAGATACA+TGG + chr8_1:12731014-12731033 Msa1179350:CDS 40.0%
AGTCAACCCAATTGCATCAA+TGG + chr8_1:12731111-12731130 Msa1179350:CDS 40.0%
! GTTGTGCCATTGATGCAATT+GGG - chr8_1:12731120-12731139 None:intergenic 40.0%
! TGTTGTGCCATTGATGCAAT+TGG - chr8_1:12731121-12731140 None:intergenic 40.0%
AGTCAATGATCAAAGCCTTG+AGG + chr8_1:12731201-12731220 Msa1179350:CDS 40.0%
ACTAAGAGCTTCATGTTCCT+TGG - chr8_1:12731260-12731279 None:intergenic 40.0%
TGATGGCAATGAAAACCTGA+GGG - chr8_1:12731341-12731360 None:intergenic 40.0%
ATGATGGCAATGAAAACCTG+AGG - chr8_1:12731342-12731361 None:intergenic 40.0%
! ACCCTAGTATTCCTTTAGGA+TGG + chr8_1:12731392-12731411 Msa1179350:CDS 40.0%
CCCATCCTAAAGGAATACTA+GGG - chr8_1:12731396-12731415 None:intergenic 40.0%
!! CCCTAGTATTCCTTTAGGAT+GGG + chr8_1:12731393-12731412 Msa1179350:CDS 40.0%
TCCCATCCTAAAGGAATACT+AGG - chr8_1:12731397-12731416 None:intergenic 40.0%
! CTCTTGCTGTAGCAAAGAGA+AGG + chr8_1:12729159-12729178 Msa1179350:CDS 45.0%
AGCAAAGAGAAGGTCAACAG+AGG + chr8_1:12729169-12729188 Msa1179350:CDS 45.0%
AGAAGGTCAACAGAGGACTA+TGG + chr8_1:12729176-12729195 Msa1179350:CDS 45.0%
CTTATGGACATGATTGCTGC+TGG + chr8_1:12729239-12729258 Msa1179350:CDS 45.0%
TGTGTAGGTTTGCAGAGATG+TGG + chr8_1:12729429-12729448 Msa1179350:intron 45.0%
ATAGAACTCCACCGCATTCT+AGG + chr8_1:12729537-12729556 Msa1179350:CDS 45.0%
! CATGCTAACTTGTGCCCTAA+GGG - chr8_1:12730138-12730157 None:intergenic 45.0%
! TCATGCTAACTTGTGCCCTA+AGG - chr8_1:12730139-12730158 None:intergenic 45.0%
TAAAAACAGCGTTGTAGGGG+AGG - chr8_1:12730364-12730383 None:intergenic 45.0%
!!! CCCCTACAACGCTGTTTTTA+AGG + chr8_1:12730364-12730383 Msa1179350:CDS 45.0%
TGTCTACCACTGTACCAGTT+TGG - chr8_1:12730499-12730518 None:intergenic 45.0%
! TTTGAGATGAGGTTGGAAGG+TGG - chr8_1:12730892-12730911 None:intergenic 45.0%
TGCAACAATCATGGTCCTCA+AGG - chr8_1:12731219-12731238 None:intergenic 45.0%
ACTGTTTGGCTGCTTGATGA+TGG - chr8_1:12731358-12731377 None:intergenic 45.0%
! CTCTTGCTGTAGCAAAGAGA+AGG + chr8_1:12729159-12729178 Msa1179350:CDS 45.0%
AGCAAAGAGAAGGTCAACAG+AGG + chr8_1:12729169-12729188 Msa1179350:CDS 45.0%
AGAAGGTCAACAGAGGACTA+TGG + chr8_1:12729176-12729195 Msa1179350:CDS 45.0%
CTTATGGACATGATTGCTGC+TGG + chr8_1:12729239-12729258 Msa1179350:CDS 45.0%
TGTGTAGGTTTGCAGAGATG+TGG + chr8_1:12729429-12729448 Msa1179350:intron 45.0%
ATAGAACTCCACCGCATTCT+AGG + chr8_1:12729537-12729556 Msa1179350:CDS 45.0%
! CATGCTAACTTGTGCCCTAA+GGG - chr8_1:12730138-12730157 None:intergenic 45.0%
! TCATGCTAACTTGTGCCCTA+AGG - chr8_1:12730139-12730158 None:intergenic 45.0%
TAAAAACAGCGTTGTAGGGG+AGG - chr8_1:12730364-12730383 None:intergenic 45.0%
!!! CCCCTACAACGCTGTTTTTA+AGG + chr8_1:12730364-12730383 Msa1179350:CDS 45.0%
TGTCTACCACTGTACCAGTT+TGG - chr8_1:12730499-12730518 None:intergenic 45.0%
! TTTGAGATGAGGTTGGAAGG+TGG - chr8_1:12730892-12730911 None:intergenic 45.0%
TGCAACAATCATGGTCCTCA+AGG - chr8_1:12731219-12731238 None:intergenic 45.0%
ACTGTTTGGCTGCTTGATGA+TGG - chr8_1:12731358-12731377 None:intergenic 45.0%
!!! AATTTTTTTATATTTTTTTG+AGG + chr8_1:12729318-12729337 Msa1179350:intron 5.0%
!!! AATTTTTTTATATTTTTTTG+AGG + chr8_1:12729318-12729337 Msa1179350:intron 5.0%
TCCACCGCATTCTAGGCAAT+AGG + chr8_1:12729544-12729563 Msa1179350:CDS 50.0%
ACCTATTGCCTAGAATGCGG+TGG - chr8_1:12729548-12729567 None:intergenic 50.0%
CAAATTGCCAAGCACTTGCC+AGG + chr8_1:12730236-12730255 Msa1179350:CDS 50.0%
CAAGCACTTGCCAGGAAGAA+CGG + chr8_1:12730244-12730263 Msa1179350:CDS 50.0%
AAGCACTTGCCAGGAAGAAC+GGG + chr8_1:12730245-12730264 Msa1179350:CDS 50.0%
ACCTCATTACCCGTTCTTCC+TGG - chr8_1:12730257-12730276 None:intergenic 50.0%
TCCACCGCATTCTAGGCAAT+AGG + chr8_1:12729544-12729563 Msa1179350:CDS 50.0%
ACCTATTGCCTAGAATGCGG+TGG - chr8_1:12729548-12729567 None:intergenic 50.0%
CAAATTGCCAAGCACTTGCC+AGG + chr8_1:12730236-12730255 Msa1179350:CDS 50.0%
CAAGCACTTGCCAGGAAGAA+CGG + chr8_1:12730244-12730263 Msa1179350:CDS 50.0%
AAGCACTTGCCAGGAAGAAC+GGG + chr8_1:12730245-12730264 Msa1179350:CDS 50.0%
ACCTCATTACCCGTTCTTCC+TGG - chr8_1:12730257-12730276 None:intergenic 50.0%
CGTTCTTCCTGGCAAGTGCT+TGG - chr8_1:12730246-12730265 None:intergenic 55.0%
GCCAGGAAGAACGGGTAATG+AGG + chr8_1:12730253-12730272 Msa1179350:CDS 55.0%
CGTTCTTCCTGGCAAGTGCT+TGG - chr8_1:12730246-12730265 None:intergenic 55.0%
GCCAGGAAGAACGGGTAATG+AGG + chr8_1:12730253-12730272 Msa1179350:CDS 55.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 12729094 12731423 12729094 ID=Msa1179350;Name=Msa1179350
chr8_1 mRNA 12729094 12731423 12729094 ID=Msa1179350-mRNA-1;Parent=Msa1179350;Name=Msa1179350-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|3|0|504
chr8_1 exon 12729094 12729283 12729094 ID=Msa1179350-mRNA-1:exon:4581;Parent=Msa1179350-mRNA-1
chr8_1 exon 12729436 12729565 12729436 ID=Msa1179350-mRNA-1:exon:4582;Parent=Msa1179350-mRNA-1
chr8_1 exon 12730229 12731423 12730229 ID=Msa1179350-mRNA-1:exon:4583;Parent=Msa1179350-mRNA-1
chr8_1 CDS 12729094 12729283 12729094 ID=Msa1179350-mRNA-1:cds;Parent=Msa1179350-mRNA-1
chr8_1 CDS 12729436 12729565 12729436 ID=Msa1179350-mRNA-1:cds;Parent=Msa1179350-mRNA-1
chr8_1 CDS 12730229 12731423 12730229 ID=Msa1179350-mRNA-1:cds;Parent=Msa1179350-mRNA-1
Gene Sequence

>Msa1179350

AAAGCCAAAAGACTTATTCATCAAACTAAGGAGAAAAGAAACAAGACATCAATCATGGCACATCACTCTTGCTGTAGCAAAGAGAAGGTCAACAGAGGACTATGGTCACCTGAAGAAGATGAAAAACTCATCAAATACATCACAACTTATGGACATGATTGCTGCTGGAGTTCTGTTCCAAAACTTGCTGGTTTGCAGAGATGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATCTAAGACCTGATTTGAAACGTGGAAGTTTCTCTTATGAAGAAGTAGCACTCATCATAGAACTCCACCGCATTCTAGGCAATAGATGGACACAAATTGCCAAGCACTTGCCAGGAAGAACGGGTAATGAGGTGAAAAACTTTTGGAATTCAAGCATAACGAAAAAACTCCTTTCTGATGATATTGTTCCATCCTTCACCCCATTTTATGATATTCGCCTCCCCTACAACGCTGTTTTTAAGGAAAGTTTTTTTCCTTTAAATGCAAACCCTAATGTGATGCTAAACTTCAATCCTCACCATCAAGATCACCTATACCTTTCAAACTCGTCTCCAAATATGCAATGTTTTCACCAAACTGGTACAGTGGTAGACATCAATAATCATTTCAATGCCAGGTTCCTACCCAATCAAAATCCAATTATACCTGAAATAGTACTACCATCTAATCCTTCCTCTTGTGAAAATACATGGTCATTGGATTGTGTAGCTCTTGATCACAATCCAAATCAATTGGAAAATCAAATTTCAAAAAGTGGCACCACTCCATTTAATATTGGTGACACATCAATCAACCAAAGTTCATTAATGCAGCAGTATGATCAATATCATGATCATGAAGCCATTGTGCCTAAATTAGTCAATTATCAAAGCCTTGAGGATTATGCATGTAGCATCCTCGATTATTCATCTGATTCCAAGGAACATGTGATCCTAAACTCCAATCATCATCATCAAGATCAGTTCCACCTTCCAACCTCATCTCAAAATCTACAAGGAAATTTTTACCAAATTGATACAAACGTAGACATGATCAATAACCATTATAATCCCAATTTCCTTGACATTGAGAATCAAATACCATCTAATCCTTTCCCTGATGAAGATACATGGTCATTAGATTGTGTGGCTCTTCATATCAATAGAAATAAAGAAAATCCAAGTTATACTACCCAGCAAAACAATTTAGTCAACCCAATTGCATCAATGGCACAACAATATGATCAATGTCATGATCATCACTTGGTTGAAACTGAACCCAATATTGTGCCTCAATTAGTCAATGATCAAAGCCTTGAGGACCATGATTGTTGCATCCTAGATTCATTTGATTCCAAGGAACATGAAGCTCTTAGTATTATTTATCCACAAGATCAAAATATGGAAACTAACCAATTGGATAATTACATTGATGCCCTCAGGTTTTCATTGCCATCATCAAGCAGCCAAACAGTTAATTACAATACAAACCCTAGTATTCCTTTAGGATGGGAGCCATAG
Protein sequence

>Msa1179350

KAKRLIHQTKEKRNKTSIMAHHSCCSKEKVNRGLWSPEEDEKLIKYITTYGHDCCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSYEEVALIIELHRILGNRWTQIAKHLPGRTGNEVKNFWNSSITKKLLSDDIVPSFTPFYDIRLPYNAVFKESFFPLNANPNVMLNFNPHHQDHLYLSNSSPNMQCFHQTGTVVDINNHFNARFLPNQNPIIPEIVLPSNPSSCENTWSLDCVALDHNPNQLENQISKSGTTPFNIGDTSINQSSLMQQYDQYHDHEAIVPKLVNYQSLEDYACSILDYSSDSKEHVILNSNHHHQDQFHLPTSSQNLQGNFYQIDTNVDMINNHYNPNFLDIENQIPSNPFPDEDTWSLDCVALHINRNKENPSYTTQQNNLVNPIASMAQQYDQCHDHHLVETEPNIVPQLVNDQSLEDHDCCILDSFDSKEHEALSIIYPQDQNMETNQLDNYIDALRFSLPSSSSQTVNYNTNPSIPLGWEP*