Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1181960 | A0A072TYR1 | 62.617 | 321 | 49 | 7 | 1 | 308 | 1 | 263 | 3.78e-115 | 359 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1181960 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1181960 | MtrunA17_Chr2g0287651 | 58.152 | 184 | 63 | 3 | 160 | 331 | 58 | 239 | 5.57e-66 | 230 |
| Msa1181960 | MtrunA17_Chr2g0287651 | 58.462 | 65 | 27 | 0 | 315 | 379 | 494 | 558 | 6.89e-17 | 84.3 |
| Msa1181960 | MtrunA17_Chr1g0203051 | 32.701 | 211 | 125 | 5 | 121 | 315 | 20 | 229 | 2.33e-23 | 104 |
| Msa1181960 | MtrunA17_Chr8g0389811 | 37.815 | 119 | 67 | 3 | 145 | 256 | 48 | 166 | 6.87e-15 | 73.9 |
| Msa1181960 | MtrunA17_Chr6g0473421 | 40.000 | 85 | 48 | 1 | 168 | 249 | 46 | 130 | 2.91e-11 | 62.0 |
| Msa1181960 | MtrunA17_Chr1g0171741 | 26.846 | 149 | 92 | 4 | 159 | 295 | 119 | 262 | 8.56e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1181960 | AT4G38180.1 | 33.333 | 147 | 85 | 3 | 181 | 314 | 77 | 223 | 8.96e-11 | 65.5 |
Find 119 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGTCTTTACTGATTT+TGG | 0.059598 | 8_1:-16739807 | Msa1181960:CDS |
| ATCCTTCTCCCACGTCTTTC+TGG | 0.095830 | 8_1:+16736985 | None:intergenic |
| ATCCTTCTCCCACGTCTTTC+TGG | 0.095830 | 8_1:+16737087 | None:intergenic |
| ATTCTTCTCCCACGTCTTTC+TGG | 0.115659 | 8_1:+16736883 | None:intergenic |
| AGATGTGGCAGGAGGATTAA+AGG | 0.239373 | 8_1:-16736694 | Msa1181960:CDS |
| AATAAGAACTTGTCATATAA+TGG | 0.247315 | 8_1:-16738842 | Msa1181960:CDS |
| CCCACGTCTTTCTGGCTATC+AGG | 0.264446 | 8_1:+16737095 | None:intergenic |
| TGTTCACTACAGACCCAAAA+AGG | 0.266221 | 8_1:-16739001 | Msa1181960:CDS |
| TGCATTTACACCCTGTTTAT+CGG | 0.290641 | 8_1:-16738915 | Msa1181960:CDS |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 8_1:-16739582 | Msa1181960:CDS |
| CATTAACTGCTGAAGGAATA+AGG | 0.318241 | 8_1:-16739257 | Msa1181960:CDS |
| TGCTGAAGGAATAAGGAAAA+TGG | 0.318497 | 8_1:-16739250 | Msa1181960:CDS |
| CTGTTAGGAAGAGTGATATT+AGG | 0.340554 | 8_1:-16739164 | Msa1181960:intron |
| CCTATATTTAAACACATTGT+TGG | 0.342545 | 8_1:+16736611 | None:intergenic |
| TGGCTAGCACTCTGAGACAT+AGG | 0.369422 | 8_1:+16736720 | None:intergenic |
| CATTGGTTGGAGTAGGTTCA+TGG | 0.373380 | 8_1:+16738941 | None:intergenic |
| CCAACAATGTGTTTAAATAT+AGG | 0.379749 | 8_1:-16736611 | Msa1181960:CDS |
| GATGTGGCAGGAGGATTAAA+GGG | 0.402204 | 8_1:-16736693 | Msa1181960:CDS |
| TGGCTAGCATGCTGAGACAT+TGG | 0.402894 | 8_1:+16736903 | None:intergenic |
| ATAAGAACTTGTCATATAAT+GGG | 0.403187 | 8_1:-16738841 | Msa1181960:CDS |
| GGTACACCGGAACATGATTA+CGG | 0.407134 | 8_1:-16739786 | Msa1181960:CDS |
| AGCATTTATCAATGTTAGAT+AGG | 0.409294 | 8_1:-16739074 | Msa1181960:CDS |
| GATTATAGTGCTGGTGATAA+AGG | 0.421954 | 8_1:-16739558 | Msa1181960:CDS |
| TATAAGTACGGTAAGTGTAA+TGG | 0.430620 | 8_1:-16739192 | Msa1181960:CDS |
| CGAGGCTGCTGAAATCTATA+CGG | 0.448201 | 8_1:-16737882 | Msa1181960:CDS |
| TGGCTAGCATGCTGAGACAT+GGG | 0.453679 | 8_1:+16736801 | None:intergenic |
| ATGTTGACTGCTTGCAGCAC+AGG | 0.458698 | 8_1:+16736833 | None:intergenic |
| GGGATACATGGTGGCTCAGA+AGG | 0.464555 | 8_1:-16738821 | Msa1181960:CDS |
| TAGTGAACACGGAGCCTAGC+TGG | 0.466097 | 8_1:+16739015 | None:intergenic |
| TGGCTAGCATGCTGAGACAT+GGG | 0.467113 | 8_1:+16737005 | None:intergenic |
| GATGAGCGATATGATGAAAC+TGG | 0.468588 | 8_1:-16739615 | Msa1181960:CDS |
| GAAACATATCCGATCATTGT+TGG | 0.469215 | 8_1:-16739738 | Msa1181960:CDS |
| GTAGATAAAGCACAGATTGA+TGG | 0.478198 | 8_1:-16738880 | Msa1181960:CDS |
| TGATTACGGTTCTACGGATG+TGG | 0.481654 | 8_1:-16739772 | Msa1181960:CDS |
| TTGGCTAGCATGCTGAGACA+TGG | 0.487183 | 8_1:+16736800 | None:intergenic |
| CAGCACAGGGGATGAAAACC+TGG | 0.488423 | 8_1:+16737931 | None:intergenic |
| TGTTCTGGTGATTATAGTGC+TGG | 0.489646 | 8_1:-16739567 | Msa1181960:CDS |
| CGCAGATGAGTTGTCAGCAC+AGG | 0.491267 | 8_1:+16737917 | None:intergenic |
| AAACATATCCGATCATTGTT+GGG | 0.491804 | 8_1:-16739737 | Msa1181960:CDS |
| GTAGAACCGTAATCATGTTC+CGG | 0.492886 | 8_1:+16739780 | None:intergenic |
| AGACGTGGGAGAAGAATCAA+AGG | 0.494945 | 8_1:-16736877 | Msa1181960:CDS |
| AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 8_1:-16736979 | Msa1181960:CDS |
| AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 8_1:-16737081 | Msa1181960:CDS |
| GCAGTATGTATGCAACAAGC+AGG | 0.502107 | 8_1:-16739112 | Msa1181960:CDS |
| GGTACTTACGTTCATATTCA+CGG | 0.502731 | 8_1:+16736632 | None:intergenic |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 8_1:-16739292 | Msa1181960:CDS |
| GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 8_1:-16739303 | Msa1181960:CDS |
| GTGAAAGAAGAGATTATGAA+AGG | 0.507624 | 8_1:-16737842 | Msa1181960:CDS |
| GCTCAGAAGGGTGGATATCC+CGG | 0.515458 | 8_1:-16738808 | Msa1181960:CDS |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 8_1:-16739264 | Msa1181960:CDS |
| CTGGCTAGCATGCTGAGACA+TGG | 0.519805 | 8_1:+16737004 | None:intergenic |
| GACGTGGGAGGAGGATCAAA+GGG | 0.523575 | 8_1:-16736774 | Msa1181960:CDS |
| CCGATCATTGTTGGGAGTGG+TGG | 0.525336 | 8_1:-16739729 | Msa1181960:CDS |
| CCACCACTCCCAACAATGAT+CGG | 0.545431 | 8_1:+16739729 | None:intergenic |
| AAATTGAGAAGTTAATCAAA+AGG | 0.545658 | 8_1:+16736551 | None:intergenic |
| AGATTACTTGTGCAGTAAGT+AGG | 0.547137 | 8_1:+16736577 | None:intergenic |
| AGACGTGGGAGGAGGATCAA+AGG | 0.549459 | 8_1:-16736775 | Msa1181960:CDS |
| GGAACATGATTACGGTTCTA+CGG | 0.552732 | 8_1:-16739778 | Msa1181960:CDS |
| TTGTCATATAATGGGATACA+TGG | 0.555297 | 8_1:-16738833 | Msa1181960:CDS |
| AGCCAGAAAGACGTGGGAGA+AGG | 0.560631 | 8_1:-16737089 | Msa1181960:CDS |
| TGTAAATGCACAACATTGGT+TGG | 0.560698 | 8_1:+16738928 | None:intergenic |
| GACGTGGGAGAAGGATCAAA+GGG | 0.564696 | 8_1:-16736978 | Msa1181960:CDS |
| GACGTGGGAGAAGGATCAAA+GGG | 0.564696 | 8_1:-16737080 | Msa1181960:CDS |
| AGCCAGAAAGACGTGGGAGA+AGG | 0.570261 | 8_1:-16736987 | Msa1181960:CDS |
| TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 8_1:-16739287 | Msa1181960:CDS |
| TACATGGTGGCTCAGAAGGG+TGG | 0.573659 | 8_1:-16738817 | Msa1181960:CDS |
| TATCCGATCATTGTTGGGAG+TGG | 0.573961 | 8_1:-16739732 | Msa1181960:CDS |
| AGAAAGATGCTCAGTGCTTG+CGG | 0.575791 | 8_1:+16736929 | None:intergenic |
| GCAGATGAGTTGTCAGCACA+GGG | 0.575960 | 8_1:+16737918 | None:intergenic |
| TAGTCAAAGCGAGGTTGTCA+AGG | 0.577221 | 8_1:-16736667 | Msa1181960:CDS |
| GCCTGATAGCCAGAAAGACG+TGG | 0.578633 | 8_1:-16737096 | Msa1181960:CDS |
| CAGTATGTATGCAACAAGCA+GGG | 0.584535 | 8_1:-16739111 | Msa1181960:CDS |
| GATATTAGGCGCAATGCTAA+CGG | 0.587833 | 8_1:-16739150 | Msa1181960:CDS |
| GGTGAAAGTGAACGTGATGA+AGG | 0.589312 | 8_1:-16739468 | Msa1181960:CDS |
| GGTGATAAAGGTGAAGATGA+TGG | 0.589452 | 8_1:-16739546 | Msa1181960:CDS |
| GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 8_1:-16736892 | Msa1181960:CDS |
| GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 8_1:-16736994 | Msa1181960:CDS |
| GTGGCAGGAGGATTAAAGGG+AGG | 0.599925 | 8_1:-16736690 | Msa1181960:CDS |
| GGAGACAATGAAAGTGATGA+TGG | 0.609236 | 8_1:-16739594 | Msa1181960:CDS |
| GGATACATGGTGGCTCAGAA+GGG | 0.612576 | 8_1:-16738820 | Msa1181960:CDS |
| AATCTGTGCTTTATCTACCT+CGG | 0.613894 | 8_1:+16738885 | None:intergenic |
| AGTGAAGGTCATGGTAGTGA+AGG | 0.614950 | 8_1:-16739342 | Msa1181960:CDS |
| TCTGCGTTGTCGTGAACGCG+AGG | 0.617399 | 8_1:-16737900 | Msa1181960:CDS |
| GATGAAAGTCAAGGTGATGA+AGG | 0.618015 | 8_1:-16739513 | Msa1181960:CDS |
| AGGGTGTAAATGCACAACAT+TGG | 0.627835 | 8_1:+16738924 | None:intergenic |
| AGTATGTATGCAACAAGCAG+GGG | 0.634341 | 8_1:-16739110 | Msa1181960:CDS |
| TGCACAACATTGGTTGGAGT+AGG | 0.634569 | 8_1:+16738934 | None:intergenic |
| GAACGTGGTGAAAGTGAAGG+TGG | 0.640542 | 8_1:-16739489 | Msa1181960:CDS |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 8_1:-16739029 | Msa1181960:CDS |
| TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 8_1:-16739298 | Msa1181960:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 8_1:-16739351 | Msa1181960:CDS |
| TCATATAATGGGATACATGG+TGG | 0.669224 | 8_1:-16738830 | Msa1181960:CDS |
| CTAACGGTGAGATTGTAATG+AGG | 0.669370 | 8_1:-16739134 | Msa1181960:CDS |
| GAAAGTGAACGTGATGAAGG+TGG | 0.670783 | 8_1:-16739465 | Msa1181960:CDS |
| CAAAGGGAGGCAAATCAAAG+AGG | 0.670795 | 8_1:-16736962 | Msa1181960:CDS |
| GACGTGGGAGAAGAATCAAA+GGG | 0.681843 | 8_1:-16736876 | Msa1181960:CDS |
| GATGATGATGATGTGAGTCA+TGG | 0.683220 | 8_1:-16739672 | Msa1181960:intron |
| GGTGAACGTGGTGAAAGTGA+AGG | 0.685960 | 8_1:-16739492 | Msa1181960:CDS |
| AGGTGTTGCACTGAGTGTGA+AGG | 0.686205 | 8_1:-16737822 | Msa1181960:CDS |
| AAAGGGAGGTAGTCAAAGCG+AGG | 0.690394 | 8_1:-16736676 | Msa1181960:CDS |
| CCTGATAGCCAGAAAGACGT+GGG | 0.690821 | 8_1:-16737095 | Msa1181960:CDS |
| CAAGGTGATGAAGGTGAACG+TGG | 0.696606 | 8_1:-16739504 | Msa1181960:CDS |
| CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 8_1:-16736891 | Msa1181960:CDS |
| CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 8_1:-16736993 | Msa1181960:CDS |
| AGTGAAGGTCATGCTAGTGA+AGG | 0.698593 | 8_1:-16739372 | Msa1181960:CDS |
| GGTGGACGTGATGAAAGTGA+AGG | 0.700815 | 8_1:-16739447 | Msa1181960:CDS |
| TGTTTATCGGAAAATATCCG+AGG | 0.704996 | 8_1:-16738902 | Msa1181960:CDS |
| GTGGGAGAAGGATCAAAGGG+AGG | 0.706029 | 8_1:-16736975 | Msa1181960:CDS |
| GACAATGAAAGTGATGATGG+TGG | 0.706532 | 8_1:-16739591 | Msa1181960:CDS |
| ATTGATGGTCTTCAGTCACA+CGG | 0.708259 | 8_1:-16738865 | Msa1181960:CDS |
| GTGGGAGGAGGATCAAAGGG+AGG | 0.710691 | 8_1:-16736771 | Msa1181960:CDS |
| GTGGGAGAAGAATCAAAGGG+AGG | 0.711605 | 8_1:-16736873 | Msa1181960:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 8_1:-16739417 | Msa1181960:intron |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 8_1:-16739432 | Msa1181960:CDS |
| AGTGAATGCGATGAAAGTCA+AGG | 0.740679 | 8_1:-16739522 | Msa1181960:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.741774 | 8_1:-16739357 | Msa1181960:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.741774 | 8_1:-16739387 | Msa1181960:intron |
| ACTTTGTACGAGTGATACGT+CGG | 0.754568 | 8_1:+16739040 | None:intergenic |
| CAGATGAGTTGTCAGCACAG+GGG | 0.773409 | 8_1:+16737919 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACGATTTTTATTATAAGTA+CGG | - | chr8_1:16737181-16737200 | Msa1181960:intron | 15.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr8_1:16737543-16737562 | Msa1181960:intron | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr8_1:16737544-16737563 | Msa1181960:intron | 20.0% |
| !!! | AAAAATGTGTGTTGTTATTA+AGG | - | chr8_1:16737642-16737661 | Msa1181960:intron | 20.0% |
| !! | AAACAATAGAAACTTATATG+TGG | - | chr8_1:16737938-16737957 | Msa1181960:CDS | 20.0% |
| !! | AACAATAGAAACTTATATGT+GGG | - | chr8_1:16737939-16737958 | Msa1181960:CDS | 20.0% |
| !! | AAATCATAAAGAGTTATGTT+AGG | - | chr8_1:16738343-16738362 | Msa1181960:intron | 20.0% |
| !! | CTTCAACACAAAAAAAATAT+GGG | + | chr8_1:16738730-16738749 | None:intergenic | 20.0% |
| !!! | AACAATGTCTTTACTGATTT+TGG | - | chr8_1:16736578-16736597 | Msa1181960:CDS | 25.0% |
| ! | AATTATACGAAGAATACTCA+AGG | - | chr8_1:16736737-16736756 | Msa1181960:CDS | 25.0% |
| ! | ATTATACGAAGAATACTCAA+GGG | - | chr8_1:16736738-16736757 | Msa1181960:CDS | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr8_1:16737121-16737140 | Msa1181960:intron | 25.0% |
| ! | AGCATTTATCAATGTTAGAT+AGG | - | chr8_1:16737311-16737330 | Msa1181960:intron | 25.0% |
| ! | CTTAACATTCAGATAGTTTA+GGG | + | chr8_1:16737686-16737705 | None:intergenic | 25.0% |
| ! | ACTTAACATTCAGATAGTTT+AGG | + | chr8_1:16737687-16737706 | None:intergenic | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+TGG | - | chr8_1:16737756-16737775 | Msa1181960:intron | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | - | chr8_1:16738152-16738171 | Msa1181960:intron | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | + | chr8_1:16738247-16738266 | None:intergenic | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | - | chr8_1:16738251-16738270 | Msa1181960:intron | 25.0% |
| !! | TTGTAGCTAATTTTAAATCC+AGG | - | chr8_1:16738436-16738455 | Msa1181960:intron | 25.0% |
| !!! | GAAGTTGATAAAATATCTTG+AGG | - | chr8_1:16738617-16738636 | Msa1181960:intron | 25.0% |
| ! | TTGATAAAATATCTTGAGGA+GGG | - | chr8_1:16738621-16738640 | Msa1181960:intron | 25.0% |
| ! | CCTTCAACACAAAAAAAATA+TGG | + | chr8_1:16738731-16738750 | None:intergenic | 25.0% |
| !!! | CCATATTTTTTTTGTGTTGA+AGG | - | chr8_1:16738728-16738747 | Msa1181960:intron | 25.0% |
| !! | GAACATTTTCTTACAAACTT+TGG | + | chr8_1:16739092-16739111 | None:intergenic | 25.0% |
| ! | CCTATATTTAAACACATTGT+TGG | + | chr8_1:16739777-16739796 | None:intergenic | 25.0% |
| ! | CCAACAATGTGTTTAAATAT+AGG | - | chr8_1:16739774-16739793 | Msa1181960:CDS | 25.0% |
| AAACATATCCGATCATTGTT+GGG | - | chr8_1:16736648-16736667 | Msa1181960:CDS | 30.0% | |
| TATAAGTACGGTAAGTGTAA+TGG | - | chr8_1:16737193-16737212 | Msa1181960:intron | 30.0% | |
| ! | ACAACATATCTACCCTTTTT+GGG | + | chr8_1:16737400-16737419 | None:intergenic | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr8_1:16737414-16737433 | Msa1181960:intron | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr8_1:16737415-16737434 | Msa1181960:intron | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | - | chr8_1:16737552-16737571 | Msa1181960:intron | 30.0% |
| ! | ATGTGTGTTGTTATTAAGGA+TGG | - | chr8_1:16737646-16737665 | Msa1181960:intron | 30.0% |
| GAATATTCACAAAAGGAATG+TGG | + | chr8_1:16737721-16737740 | None:intergenic | 30.0% | |
| !!! | AAATGTCTATTTTTGGCAGA+TGG | - | chr8_1:16737763-16737782 | Msa1181960:intron | 30.0% |
| !! | AGATCAGATTATTTCTGCTT+TGG | - | chr8_1:16737793-16737812 | Msa1181960:intron | 30.0% |
| CACTCACAAACAGTTATATT+TGG | - | chr8_1:16737895-16737914 | Msa1181960:CDS | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | - | chr8_1:16737967-16737986 | Msa1181960:CDS | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | - | chr8_1:16738115-16738134 | Msa1181960:intron | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | - | chr8_1:16738119-16738138 | Msa1181960:intron | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | - | chr8_1:16738155-16738174 | Msa1181960:intron | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | - | chr8_1:16738175-16738194 | Msa1181960:intron | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | - | chr8_1:16738176-16738195 | Msa1181960:intron | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | chr8_1:16738177-16738196 | Msa1181960:intron | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr8_1:16738178-16738197 | Msa1181960:intron | 30.0% |
| CATATGAGAACAAAGAATTG+TGG | - | chr8_1:16738250-16738269 | Msa1181960:intron | 30.0% | |
| AAGAGTTATGTTAGGAAGAA+AGG | - | chr8_1:16738351-16738370 | Msa1181960:intron | 30.0% | |
| GTGAAAGAAGAGATTATGAA+AGG | - | chr8_1:16738543-16738562 | Msa1181960:intron | 30.0% | |
| ! | GTTGATAAAATATCTTGAGG+AGG | - | chr8_1:16738620-16738639 | Msa1181960:intron | 30.0% |
| ACAAAAAAAATATGGGAGCA+TGG | + | chr8_1:16738723-16738742 | None:intergenic | 30.0% | |
| TTGAACACATTCCAAAATGT+TGG | - | chr8_1:16738760-16738779 | Msa1181960:intron | 30.0% | |
| ! | ATGTGTCTACAAATTTTTGC+AGG | - | chr8_1:16738892-16738911 | Msa1181960:CDS | 30.0% |
| ! | TGTGTCTACAAATTTTTGCA+GGG | - | chr8_1:16738893-16738912 | Msa1181960:CDS | 30.0% |
| TGCTCCAAAGAAGAATAAAA+TGG | - | chr8_1:16739064-16739083 | Msa1181960:CDS | 30.0% | |
| GTAAGAAAATGTTCAAACTG+TGG | - | chr8_1:16739098-16739117 | Msa1181960:CDS | 30.0% | |
| ! | CAGAACATGTCTTTTTCTTT+GGG | + | chr8_1:16739643-16739662 | None:intergenic | 30.0% |
| !!! | CTTTACTGATTTTGGTACAC+CGG | - | chr8_1:16736586-16736605 | Msa1181960:CDS | 35.0% |
| GAAACATATCCGATCATTGT+TGG | - | chr8_1:16736647-16736666 | Msa1181960:CDS | 35.0% | |
| AAGAATACTCAAGGGAATAC+AGG | - | chr8_1:16736746-16736765 | Msa1181960:CDS | 35.0% | |
| !! | GATTATAGTGCTGGTGATAA+AGG | - | chr8_1:16736827-16736846 | Msa1181960:CDS | 35.0% |
| ! | GAAGATGATGATGTAGTTGT+TGG | - | chr8_1:16737082-16737101 | Msa1181960:CDS | 35.0% |
| CATTAACTGCTGAAGGAATA+AGG | - | chr8_1:16737128-16737147 | Msa1181960:intron | 35.0% | |
| TGCTGAAGGAATAAGGAAAA+TGG | - | chr8_1:16737135-16737154 | Msa1181960:intron | 35.0% | |
| !!! | AGTGTAATGGTTTTGCTGTT+AGG | - | chr8_1:16737206-16737225 | Msa1181960:intron | 35.0% |
| CTGTTAGGAAGAGTGATATT+AGG | - | chr8_1:16737221-16737240 | Msa1181960:intron | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | + | chr8_1:16737401-16737420 | None:intergenic | 35.0% |
| TGTAAATGCACAACATTGGT+TGG | + | chr8_1:16737460-16737479 | None:intergenic | 35.0% | |
| TGCATTTACACCCTGTTTAT+CGG | - | chr8_1:16737470-16737489 | Msa1181960:intron | 35.0% | |
| ! | CGGATATTTTCCGATAAACA+GGG | + | chr8_1:16737483-16737502 | None:intergenic | 35.0% |
| ! | TCGGATATTTTCCGATAAAC+AGG | + | chr8_1:16737484-16737503 | None:intergenic | 35.0% |
| TGTTTATCGGAAAATATCCG+AGG | - | chr8_1:16737483-16737502 | Msa1181960:intron | 35.0% | |
| AATCTGTGCTTTATCTACCT+CGG | + | chr8_1:16737503-16737522 | None:intergenic | 35.0% | |
| GTAGATAAAGCACAGATTGA+TGG | - | chr8_1:16737505-16737524 | Msa1181960:intron | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | - | chr8_1:16737555-16737574 | Msa1181960:intron | 35.0% |
| !!! | TTTTTTAGTGAACCCAACAC+CGG | + | chr8_1:16737599-16737618 | None:intergenic | 35.0% |
| AGTGGCAGAATATTCACAAA+AGG | + | chr8_1:16737728-16737747 | None:intergenic | 35.0% | |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr8_1:16737906-16737925 | Msa1181960:CDS | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | - | chr8_1:16737966-16737985 | Msa1181960:CDS | 35.0% |
| TCCCATACAATCTAGAAAAC+TGG | + | chr8_1:16737971-16737990 | None:intergenic | 35.0% | |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | - | chr8_1:16738179-16738198 | Msa1181960:intron | 35.0% |
| !!! | TCATATGTTTTGGTAACCCA+TGG | + | chr8_1:16738237-16738256 | None:intergenic | 35.0% |
| !! | ATTTCTGCACAATTTTGACG+AGG | - | chr8_1:16738386-16738405 | Msa1181960:intron | 35.0% |
| GTGAAGGAAAAAGAAGTGAA+TGG | - | chr8_1:16738579-16738598 | Msa1181960:intron | 35.0% | |
| ! | CGCAACAAAATCCAACATTT+TGG | + | chr8_1:16738774-16738793 | None:intergenic | 35.0% |
| ! | AATGTTGGATTTTGTTGCGT+TGG | - | chr8_1:16738775-16738794 | Msa1181960:intron | 35.0% |
| !! | GAAGATTGGTTTCTTGAATG+TGG | - | chr8_1:16738809-16738828 | Msa1181960:CDS | 35.0% |
| ! | TTCTTGAATGTGGACTATTG+TGG | - | chr8_1:16738819-16738838 | Msa1181960:CDS | 35.0% |
| ! | TCTTGAATGTGGACTATTGT+GGG | - | chr8_1:16738820-16738839 | Msa1181960:CDS | 35.0% |
| ! | GGAAGTAGATTCTAAGTTGA+TGG | - | chr8_1:16738842-16738861 | Msa1181960:CDS | 35.0% |
| ! | AGCATACAAGATACCCTTTT+TGG | + | chr8_1:16738925-16738944 | None:intergenic | 35.0% |
| TATCTTGTATGCTGATGTGT+TGG | - | chr8_1:16738932-16738951 | Msa1181960:CDS | 35.0% | |
| TGGATGACATACAAAAGCTT+CGG | - | chr8_1:16738952-16738971 | Msa1181960:CDS | 35.0% | |
| CAGTATCAATTGGAACTTCA+GGG | + | chr8_1:16738992-16739011 | None:intergenic | 35.0% | |
| GTTGAGTTTCCAGTATCAAT+TGG | + | chr8_1:16739002-16739021 | None:intergenic | 35.0% | |
| TGATACTGGAAACTCAACAA+TGG | - | chr8_1:16739004-16739023 | Msa1181960:CDS | 35.0% | |
| !!! | GGTGCCATTTTATTCTTCTT+TGG | + | chr8_1:16739071-16739090 | None:intergenic | 35.0% |
| ! | GCAGAACATGTCTTTTTCTT+TGG | + | chr8_1:16739644-16739663 | None:intergenic | 35.0% |
| GGTACTTACGTTCATATTCA+CGG | + | chr8_1:16739756-16739775 | None:intergenic | 35.0% | |
| AGATTACTTGTGCAGTAAGT+AGG | + | chr8_1:16739811-16739830 | None:intergenic | 35.0% | |
| GTAGAACCGTAATCATGTTC+CGG | + | chr8_1:16736608-16736627 | None:intergenic | 40.0% | |
| GGAACATGATTACGGTTCTA+CGG | - | chr8_1:16736607-16736626 | Msa1181960:CDS | 40.0% | |
| ! | GATGATGATGATGTGAGTCA+TGG | - | chr8_1:16736713-16736732 | Msa1181960:CDS | 40.0% |
| GATGAGCGATATGATGAAAC+TGG | - | chr8_1:16736770-16736789 | Msa1181960:CDS | 40.0% | |
| GGAGACAATGAAAGTGATGA+TGG | - | chr8_1:16736791-16736810 | Msa1181960:CDS | 40.0% | |
| !! | GACAATGAAAGTGATGATGG+TGG | - | chr8_1:16736794-16736813 | Msa1181960:CDS | 40.0% |
| TGTTCTGGTGATTATAGTGC+TGG | - | chr8_1:16736818-16736837 | Msa1181960:CDS | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | - | chr8_1:16736839-16736858 | Msa1181960:CDS | 40.0% | |
| AGTGAATGCGATGAAAGTCA+AGG | - | chr8_1:16736863-16736882 | Msa1181960:CDS | 40.0% | |
| GATGAAAGTCAAGGTGATGA+AGG | - | chr8_1:16736872-16736891 | Msa1181960:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr8_1:16736953-16736972 | Msa1181960:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr8_1:16736953-16736972 | Msa1181960:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr8_1:16736953-16736972 | Msa1181960:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr8_1:16736953-16736972 | Msa1181960:CDS | 40.0% | |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr8_1:16737087-16737106 | Msa1181960:CDS | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr8_1:16737093-16737112 | Msa1181960:CDS | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr8_1:16737098-16737117 | Msa1181960:CDS | 40.0% |
| GATATTAGGCGCAATGCTAA+CGG | - | chr8_1:16737235-16737254 | Msa1181960:intron | 40.0% | |
| CTAACGGTGAGATTGTAATG+AGG | - | chr8_1:16737251-16737270 | Msa1181960:intron | 40.0% | |
| CAGTATGTATGCAACAAGCA+GGG | - | chr8_1:16737274-16737293 | Msa1181960:intron | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | - | chr8_1:16737275-16737294 | Msa1181960:intron | 40.0% | |
| ACTTTGTACGAGTGATACGT+CGG | + | chr8_1:16737348-16737367 | None:intergenic | 40.0% | |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | + | chr8_1:16737384-16737403 | None:intergenic | 40.0% |
| TGTTCACTACAGACCCAAAA+AGG | - | chr8_1:16737384-16737403 | Msa1181960:intron | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | chr8_1:16737385-16737404 | Msa1181960:intron | 40.0% | |
| AGGGTGTAAATGCACAACAT+TGG | + | chr8_1:16737464-16737483 | None:intergenic | 40.0% | |
| ! | ATTGATGGTCTTCAGTCACA+CGG | - | chr8_1:16737520-16737539 | Msa1181960:intron | 40.0% |
| !! | TTTTTAGTGAACCCAACACC+GGG | + | chr8_1:16737598-16737617 | None:intergenic | 40.0% |
| AAAGGAATGTGGATCAGTTG+AGG | + | chr8_1:16737710-16737729 | None:intergenic | 40.0% | |
| GAATATTCTGCCACTGATGA+CGG | - | chr8_1:16737733-16737752 | Msa1181960:intron | 40.0% | |
| !! | TTATTTCTGCTTTGGCGATG+TGG | - | chr8_1:16737801-16737820 | Msa1181960:intron | 40.0% |
| GAACAAATACCACTATCCGT+TGG | - | chr8_1:16737849-16737868 | Msa1181960:CDS | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | chr8_1:16737861-16737880 | None:intergenic | 40.0% | |
| CAGCAAGACAAAATCACCAA+CGG | + | chr8_1:16737868-16737887 | None:intergenic | 40.0% | |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | chr8_1:16738002-16738021 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | - | chr8_1:16737999-16738018 | Msa1181960:intron | 40.0% | |
| !! | AGATGGTGATGGTTCTATGA+GGG | - | chr8_1:16738016-16738035 | Msa1181960:intron | 40.0% |
| GCATCTGAACAAGAATGCTA+TGG | - | chr8_1:16738088-16738107 | Msa1181960:intron | 40.0% | |
| ! | TAACCCATGGATTGTTCTCA+AGG | + | chr8_1:16738224-16738243 | None:intergenic | 40.0% |
| TACCTGCGTGACGATTTATT+TGG | - | chr8_1:16738282-16738301 | Msa1181960:intron | 40.0% | |
| !! | AATTTTGACGAGGCAATGAG+AGG | - | chr8_1:16738396-16738415 | Msa1181960:intron | 40.0% |
| TGAGTCGATCTCAGCAATTA+AGG | - | chr8_1:16738665-16738684 | Msa1181960:intron | 40.0% | |
| GAGTCGATCTCAGCAATTAA+GGG | - | chr8_1:16738666-16738685 | Msa1181960:intron | 40.0% | |
| TGCAGGAAATTTGAATCTCG+AGG | - | chr8_1:16738693-16738712 | Msa1181960:intron | 40.0% | |
| GCAGGAAATTTGAATCTCGA+GGG | - | chr8_1:16738694-16738713 | Msa1181960:intron | 40.0% | |
| CAGGAAATTTGAATCTCGAG+GGG | - | chr8_1:16738695-16738714 | Msa1181960:intron | 40.0% | |
| ! | TTTTGTTGCGTTGGACGAAA+AGG | - | chr8_1:16738784-16738803 | Msa1181960:intron | 40.0% |
| TTTGTTGCGTTGGACGAAAA+GGG | - | chr8_1:16738785-16738804 | Msa1181960:intron | 40.0% | |
| ! | CTTGAATGTGGACTATTGTG+GGG | - | chr8_1:16738821-16738840 | Msa1181960:CDS | 40.0% |
| TTGATGGAGATTGCTCGATA+TGG | - | chr8_1:16738858-16738877 | Msa1181960:CDS | 40.0% | |
| GGATGACATACAAAAGCTTC+GGG | - | chr8_1:16738953-16738972 | Msa1181960:CDS | 40.0% | |
| CCAGTATCAATTGGAACTTC+AGG | + | chr8_1:16738993-16739012 | None:intergenic | 40.0% | |
| CCTGAAGTTCCAATTGATAC+TGG | - | chr8_1:16738990-16739009 | Msa1181960:intron | 40.0% | |
| ! | AGTGTCTGCAGAACATTTTC+TGG | + | chr8_1:16739141-16739160 | None:intergenic | 40.0% |
| CAAAGGGAGGAAAATCAAAG+AGG | - | chr8_1:16739219-16739238 | Msa1181960:CDS | 40.0% | |
| ! | CAGCACAGGTCTTTTTCTTT+GGG | + | chr8_1:16739541-16739560 | None:intergenic | 40.0% |
| GGTACACCGGAACATGATTA+CGG | - | chr8_1:16736599-16736618 | Msa1181960:CDS | 45.0% | |
| TGATTACGGTTCTACGGATG+TGG | - | chr8_1:16736613-16736632 | Msa1181960:CDS | 45.0% | |
| TATCCGATCATTGTTGGGAG+TGG | - | chr8_1:16736653-16736672 | Msa1181960:CDS | 45.0% | |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr8_1:16736803-16736822 | Msa1181960:CDS | 45.0% |
| GGTGAAAGTGAACGTGATGA+AGG | - | chr8_1:16736917-16736936 | Msa1181960:CDS | 45.0% | |
| GAAAGTGAACGTGATGAAGG+TGG | - | chr8_1:16736920-16736939 | Msa1181960:CDS | 45.0% | |
| AGTGAAGGTCATGCTAGTGA+AGG | - | chr8_1:16736983-16737002 | Msa1181960:CDS | 45.0% | |
| AGTGAAGGTCATGCTAGTGA+AGG | - | chr8_1:16736983-16737002 | Msa1181960:CDS | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr8_1:16736974-16736993 | Msa1181960:CDS | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | - | chr8_1:16737043-16737062 | Msa1181960:CDS | 45.0% |
| GCAGTATGTATGCAACAAGC+AGG | - | chr8_1:16737273-16737292 | Msa1181960:intron | 45.0% | |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | + | chr8_1:16737447-16737466 | None:intergenic | 45.0% |
| ! | TGCACAACATTGGTTGGAGT+AGG | + | chr8_1:16737454-16737473 | None:intergenic | 45.0% |
| TTTCAAACGTCCGTCATCAG+TGG | + | chr8_1:16737746-16737765 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr8_1:16737912-16737931 | Msa1181960:CDS | 45.0% |
| GCAGTTGTAACAGATGGTGA+TGG | - | chr8_1:16738005-16738024 | Msa1181960:intron | 45.0% | |
| !! | CAGATGGTGATGGTTCTATG+AGG | - | chr8_1:16738015-16738034 | Msa1181960:intron | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | - | chr8_1:16738028-16738047 | Msa1181960:intron | 45.0% | |
| ! | ATGGCCTTGAGAACAATCCA+TGG | - | chr8_1:16738217-16738236 | Msa1181960:intron | 45.0% |
| ! | TGGCCTTGAGAACAATCCAT+GGG | - | chr8_1:16738218-16738237 | Msa1181960:intron | 45.0% |
| CACCAAATAAATCGTCACGC+AGG | + | chr8_1:16738287-16738306 | None:intergenic | 45.0% | |
| CTGCGTGACGATTTATTTGG+TGG | - | chr8_1:16738285-16738304 | Msa1181960:intron | 45.0% | |
| CGAGGCTGCTGAAATCTATA+CGG | - | chr8_1:16738503-16738522 | Msa1181960:intron | 45.0% | |
| !! | TTGCAGGGAAGTGTCCAAAA+AGG | - | chr8_1:16738908-16738927 | Msa1181960:CDS | 45.0% |
| !! | TGCAGGGAAGTGTCCAAAAA+GGG | - | chr8_1:16738909-16738928 | Msa1181960:CDS | 45.0% |
| AGAAAGATGCTCAGTGCTTG+CGG | + | chr8_1:16739255-16739274 | None:intergenic | 45.0% | |
| CAAAGGGAGGCAAATCAAAG+AGG | - | chr8_1:16739423-16739442 | Msa1181960:CDS | 45.0% | |
| AGAAAGATGCTCAGTGCTTG+CGG | + | chr8_1:16739255-16739274 | None:intergenic | 45.0% | |
| ATTCTTCTCCCACGTCTTTC+TGG | + | chr8_1:16739505-16739524 | None:intergenic | 45.0% | |
| AGACGTGGGAGAAGAATCAA+AGG | - | chr8_1:16739508-16739527 | Msa1181960:CDS | 45.0% | |
| GACGTGGGAGAAGAATCAAA+GGG | - | chr8_1:16739509-16739528 | Msa1181960:CDS | 45.0% | |
| ! | GCAGCACAGGTCTTTTTCTT+TGG | + | chr8_1:16739542-16739561 | None:intergenic | 45.0% |
| CATGCTAGCCAAAAAGACGT+GGG | - | chr8_1:16739596-16739615 | Msa1181960:CDS | 45.0% | |
| GAGTGCTAGCCAAAAAGATG+TGG | - | chr8_1:16739676-16739695 | Msa1181960:CDS | 45.0% | |
| ! | ATCCTCCTGCCACATCTTTT+TGG | + | chr8_1:16739688-16739707 | None:intergenic | 45.0% |
| AGATGTGGCAGGAGGATTAA+AGG | - | chr8_1:16739691-16739710 | Msa1181960:CDS | 45.0% | |
| GATGTGGCAGGAGGATTAAA+GGG | - | chr8_1:16739692-16739711 | Msa1181960:CDS | 45.0% | |
| TAGTCAAAGCGAGGTTGTCA+AGG | - | chr8_1:16739718-16739737 | Msa1181960:CDS | 45.0% | |
| CCACCACTCCCAACAATGAT+CGG | + | chr8_1:16736659-16736678 | None:intergenic | 50.0% | |
| CAAGGTGATGAAGGTGAACG+TGG | - | chr8_1:16736881-16736900 | Msa1181960:CDS | 50.0% | |
| GGTGAACGTGGTGAAAGTGA+AGG | - | chr8_1:16736893-16736912 | Msa1181960:CDS | 50.0% | |
| GAACGTGGTGAAAGTGAAGG+TGG | - | chr8_1:16736896-16736915 | Msa1181960:CDS | 50.0% | |
| GGTGGACGTGATGAAAGTGA+AGG | - | chr8_1:16736938-16736957 | Msa1181960:CDS | 50.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr8_1:16737356-16737375 | Msa1181960:intron | 50.0% |
| GGATACATGGTGGCTCAGAA+GGG | - | chr8_1:16737565-16737584 | Msa1181960:intron | 50.0% | |
| !! | TGGTGATGGTTCTATGAGGG+AGG | - | chr8_1:16738019-16738038 | Msa1181960:intron | 50.0% |
| TATGAGGGAGGCGATAAAGG+TGG | - | chr8_1:16738031-16738050 | Msa1181960:intron | 50.0% | |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | - | chr8_1:16738185-16738204 | Msa1181960:intron | 50.0% |
| CAGATGAGTTGTCAGCACAG+GGG | + | chr8_1:16738469-16738488 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | + | chr8_1:16738470-16738489 | None:intergenic | 50.0% | |
| ! | AGGTGTTGCACTGAGTGTGA+AGG | - | chr8_1:16738563-16738582 | Msa1181960:intron | 50.0% |
| CAGCAATTAAGGGTTCGTGC+AGG | - | chr8_1:16738676-16738695 | Msa1181960:intron | 50.0% | |
| TGGACGAAAAGGGCGAAGAT+TGG | - | chr8_1:16738795-16738814 | Msa1181960:intron | 50.0% | |
| CTGGCAATGGATCACGTATG+TGG | + | chr8_1:16739031-16739050 | None:intergenic | 50.0% | |
| CCTTTGCACTTCACTGGCAA+TGG | + | chr8_1:16739044-16739063 | None:intergenic | 50.0% | |
| CCATTGCCAGTGAAGTGCAA+AGG | - | chr8_1:16739041-16739060 | Msa1181960:CDS | 50.0% | |
| TCCCACGTCTCTTTGGCTAT+CGG | + | chr8_1:16739192-16739211 | None:intergenic | 50.0% | |
| ATCCTTCTCCCACGTCTCTT+TGG | + | chr8_1:16739199-16739218 | None:intergenic | 50.0% | |
| AGACGTGGGAGAAGGATCAA+AGG | - | chr8_1:16739202-16739221 | Msa1181960:CDS | 50.0% | |
| GACGTGGGAGAAGGATCAAA+GGG | - | chr8_1:16739203-16739222 | Msa1181960:CDS | 50.0% | |
| TGGCTATCAGGCTGAGACAT+GGG | + | chr8_1:16739281-16739300 | None:intergenic | 50.0% | |
| CCTGATAGCCAGAAAGACGT+GGG | - | chr8_1:16739290-16739309 | Msa1181960:CDS | 50.0% | |
| ATCCTTCTCCCACGTCTTTC+TGG | + | chr8_1:16739301-16739320 | None:intergenic | 50.0% | |
| AGACGTGGGAGAAGGATCAA+AGG | - | chr8_1:16739202-16739221 | Msa1181960:CDS | 50.0% | |
| GACGTGGGAGAAGGATCAAA+GGG | - | chr8_1:16739203-16739222 | Msa1181960:CDS | 50.0% | |
| TGGCTAGCATGCTGAGACAT+GGG | + | chr8_1:16739383-16739402 | None:intergenic | 50.0% | |
| CATGCTAGCCAGAAAGACGT+GGG | - | chr8_1:16739392-16739411 | Msa1181960:intron | 50.0% | |
| ATCCTTCTCCCACGTCTTTC+TGG | + | chr8_1:16739301-16739320 | None:intergenic | 50.0% | |
| AGACGTGGGAGAAGGATCAA+AGG | - | chr8_1:16739202-16739221 | Msa1181960:CDS | 50.0% | |
| GACGTGGGAGAAGGATCAAA+GGG | - | chr8_1:16739203-16739222 | Msa1181960:CDS | 50.0% | |
| TGGCTAGCATGCTGAGACAT+TGG | + | chr8_1:16739383-16739402 | None:intergenic | 50.0% | |
| CATGCTAGCCAGAAAGACGT+GGG | - | chr8_1:16739392-16739411 | Msa1181960:intron | 50.0% | |
| GTGGGAGAAGAATCAAAGGG+AGG | - | chr8_1:16739512-16739531 | Msa1181960:CDS | 50.0% | |
| ! | ATGTTGACTGCTTGCAGCAC+AGG | + | chr8_1:16739555-16739574 | None:intergenic | 50.0% |
| TGGCTAGCATGCTGAGACAT+GGG | + | chr8_1:16739383-16739402 | None:intergenic | 50.0% | |
| TTGGCTAGCATGCTGAGACA+TGG | + | chr8_1:16739588-16739607 | None:intergenic | 50.0% | |
| GCATGCTAGCCAAAAAGACG+TGG | - | chr8_1:16739595-16739614 | Msa1181960:CDS | 50.0% | |
| ! | ATCCTCCTCCCACGTCTTTT+TGG | + | chr8_1:16739607-16739626 | None:intergenic | 50.0% |
| !! | TGGCTAGCACTCTGAGACAT+AGG | + | chr8_1:16739668-16739687 | None:intergenic | 50.0% |
| GCTAGCCAAAAAGATGTGGC+AGG | - | chr8_1:16739680-16739699 | Msa1181960:CDS | 50.0% | |
| AGCCAAAAAGATGTGGCAGG+AGG | - | chr8_1:16739683-16739702 | Msa1181960:CDS | 50.0% | |
| AAAGGGAGGTAGTCAAAGCG+AGG | - | chr8_1:16739709-16739728 | Msa1181960:CDS | 50.0% | |
| CCGATCATTGTTGGGAGTGG+TGG | - | chr8_1:16736656-16736675 | Msa1181960:CDS | 55.0% | |
| TAGTGAACACGGAGCCTAGC+TGG | + | chr8_1:16737373-16737392 | None:intergenic | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | - | chr8_1:16737564-16737583 | Msa1181960:intron | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | - | chr8_1:16737568-16737587 | Msa1181960:intron | 55.0% | |
| GCTCAGAAGGGTGGATATCC+CGG | - | chr8_1:16737577-16737596 | Msa1181960:intron | 55.0% | |
| AAGGGTGGATATCCCGGTGT+TGG | - | chr8_1:16737583-16737602 | Msa1181960:intron | 55.0% | |
| AGGGTGGATATCCCGGTGTT+GGG | - | chr8_1:16737584-16737603 | Msa1181960:intron | 55.0% | |
| CGCGTCATCGTCTATGTGCT+TGG | - | chr8_1:16738066-16738085 | Msa1181960:intron | 55.0% | |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | - | chr8_1:16738190-16738209 | Msa1181960:intron | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | - | chr8_1:16738191-16738210 | Msa1181960:intron | 55.0% |
| !! | GGGGACTTGGTGAGGGAAAA+TGG | - | chr8_1:16738198-16738217 | Msa1181960:intron | 55.0% |
| CAGCACAGGGGATGAAAACC+TGG | + | chr8_1:16738457-16738476 | None:intergenic | 55.0% | |
| CGCAGATGAGTTGTCAGCAC+AGG | + | chr8_1:16738471-16738490 | None:intergenic | 55.0% | |
| ! | GGAGCACCTTTGCACTTCAC+TGG | + | chr8_1:16739050-16739069 | None:intergenic | 55.0% |
| TGGCTATCGGGCTGAGACAT+GGG | + | chr8_1:16739179-16739198 | None:intergenic | 55.0% | |
| TTGGCTATCGGGCTGAGACA+TGG | + | chr8_1:16739180-16739199 | None:intergenic | 55.0% | |
| CCCACGTCTCTTTGGCTATC+GGG | + | chr8_1:16739191-16739210 | None:intergenic | 55.0% | |
| CCCGATAGCCAAAGAGACGT+GGG | - | chr8_1:16739188-16739207 | Msa1181960:CDS | 55.0% | |
| AGCCAAAGAGACGTGGGAGA+AGG | - | chr8_1:16739194-16739213 | Msa1181960:CDS | 55.0% | |
| GTGGGAGAAGGATCAAAGGG+AGG | - | chr8_1:16739206-16739225 | Msa1181960:CDS | 55.0% | |
| CTGGCTATCAGGCTGAGACA+TGG | + | chr8_1:16739282-16739301 | None:intergenic | 55.0% | |
| GCCTGATAGCCAGAAAGACG+TGG | - | chr8_1:16739289-16739308 | Msa1181960:CDS | 55.0% | |
| !! | CCCACGTCTTTCTGGCTATC+AGG | + | chr8_1:16739293-16739312 | None:intergenic | 55.0% |
| AGCCAGAAAGACGTGGGAGA+AGG | - | chr8_1:16739296-16739315 | Msa1181960:CDS | 55.0% | |
| CTGGCTAGCATGCTGAGACA+TGG | + | chr8_1:16739384-16739403 | None:intergenic | 55.0% | |
| GCATGCTAGCCAGAAAGACG+TGG | - | chr8_1:16739391-16739410 | Msa1181960:intron | 55.0% | |
| AGCCAGAAAGACGTGGGAGA+AGG | - | chr8_1:16739296-16739315 | Msa1181960:CDS | 55.0% | |
| GTGGGAGAAGGATCAAAGGG+AGG | - | chr8_1:16739206-16739225 | Msa1181960:CDS | 55.0% | |
| GCATGCTAGCCAGAAAGACG+TGG | - | chr8_1:16739391-16739410 | Msa1181960:intron | 55.0% | |
| GCTAGCCAAAAAGACGTGGG+AGG | - | chr8_1:16739599-16739618 | Msa1181960:CDS | 55.0% | |
| AGCCAAAAAGACGTGGGAGG+AGG | - | chr8_1:16739602-16739621 | Msa1181960:CDS | 55.0% | |
| AGACGTGGGAGGAGGATCAA+AGG | - | chr8_1:16739610-16739629 | Msa1181960:CDS | 55.0% | |
| GACGTGGGAGGAGGATCAAA+GGG | - | chr8_1:16739611-16739630 | Msa1181960:CDS | 55.0% | |
| GTGGCAGGAGGATTAAAGGG+AGG | - | chr8_1:16739695-16739714 | Msa1181960:CDS | 55.0% | |
| TCTGCGTTGTCGTGAACGCG+AGG | - | chr8_1:16738485-16738504 | Msa1181960:intron | 60.0% | |
| GCCCGATAGCCAAAGAGACG+TGG | - | chr8_1:16739187-16739206 | Msa1181960:CDS | 60.0% | |
| GTGGGAGGAGGATCAAAGGG+AGG | - | chr8_1:16739614-16739633 | Msa1181960:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 16736566 | 16739841 | 16736566 | ID=Msa1181960;Name=Msa1181960 |
| chr8_1 | mRNA | 16736566 | 16739841 | 16736566 | ID=Msa1181960-mRNA-1;Parent=Msa1181960;Name=Msa1181960-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0|0.85|0.33|0.42|7|0|562 |
| chr8_1 | exon | 16739673 | 16739841 | 16739673 | ID=Msa1181960-mRNA-1:exon:6277;Parent=Msa1181960-mRNA-1 |
| chr8_1 | exon | 16739418 | 16739639 | 16739418 | ID=Msa1181960-mRNA-1:exon:6276;Parent=Msa1181960-mRNA-1 |
| chr8_1 | exon | 16739185 | 16739402 | 16739185 | ID=Msa1181960-mRNA-1:exon:6275;Parent=Msa1181960-mRNA-1 |
| chr8_1 | exon | 16739001 | 16739175 | 16739001 | ID=Msa1181960-mRNA-1:exon:6274;Parent=Msa1181960-mRNA-1 |
| chr8_1 | exon | 16738807 | 16738973 | 16738807 | ID=Msa1181960-mRNA-1:exon:6273;Parent=Msa1181960-mRNA-1 |
| chr8_1 | exon | 16737814 | 16737999 | 16737814 | ID=Msa1181960-mRNA-1:exon:6272;Parent=Msa1181960-mRNA-1 |
| chr8_1 | exon | 16736566 | 16737117 | 16736566 | ID=Msa1181960-mRNA-1:exon:6271;Parent=Msa1181960-mRNA-1 |
| chr8_1 | CDS | 16739673 | 16739841 | 16739673 | ID=Msa1181960-mRNA-1:cds;Parent=Msa1181960-mRNA-1 |
| chr8_1 | CDS | 16739418 | 16739639 | 16739418 | ID=Msa1181960-mRNA-1:cds;Parent=Msa1181960-mRNA-1 |
| chr8_1 | CDS | 16739185 | 16739402 | 16739185 | ID=Msa1181960-mRNA-1:cds;Parent=Msa1181960-mRNA-1 |
| chr8_1 | CDS | 16739001 | 16739175 | 16739001 | ID=Msa1181960-mRNA-1:cds;Parent=Msa1181960-mRNA-1 |
| chr8_1 | CDS | 16738807 | 16738973 | 16738807 | ID=Msa1181960-mRNA-1:cds;Parent=Msa1181960-mRNA-1 |
| chr8_1 | CDS | 16737814 | 16737999 | 16737814 | ID=Msa1181960-mRNA-1:cds;Parent=Msa1181960-mRNA-1 |
| chr8_1 | CDS | 16736566 | 16737117 | 16736566 | ID=Msa1181960-mRNA-1:cds;Parent=Msa1181960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
