AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1184070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1184070 MtrunA17_Chr8g0335131 98.366 306 4 1 1 306 1 305 0.0 620
Msa1184070 MtrunA17_Chr5g0399491 58.387 310 96 11 3 304 4 288 1.91e-98 291
Msa1184070 MtrunA17_Chr4g0055851 58.249 297 90 11 1 297 3 265 4.26e-95 282
Msa1184070 MtrunA17_Chr7g0258831 64.706 187 51 4 78 260 98 273 2.54e-70 219
Msa1184070 MtrunA17_Chr1g0175651 70.625 160 28 4 103 262 129 269 1.28e-67 213
Msa1184070 MtrunA17_Chr2g0308611 74.648 142 31 2 129 270 187 323 6.19e-66 210
Msa1184070 MtrunA17_Chr4g0054421 74.809 131 27 2 129 259 115 239 5.13e-64 202
Msa1184070 MtrunA17_Chr5g0400781 76.667 120 27 1 140 259 117 235 3.52e-62 198
Msa1184070 MtrunA17_Chr1g0151971 54.913 173 64 6 91 260 84 245 4.04e-53 175
Msa1184070 MtrunA17_Chr4g0044091 63.710 124 40 1 140 258 59 182 6.92e-50 164
Msa1184070 MtrunA17_Chr2g0299031 57.031 128 48 1 132 259 75 195 5.18e-43 147
Msa1184070 MtrunA17_Chr3g0135331 64.516 124 42 2 145 268 144 265 6.30e-43 149
Msa1184070 MtrunA17_Chr4g0071411 62.281 114 40 1 148 258 90 203 9.43e-38 133
Msa1184070 MtrunA17_Chr6g0450991 43.519 108 61 0 143 250 64 171 2.37e-19 86.3
Msa1184070 MtrunA17_Chr7g0217111 47.222 108 48 2 132 235 71 173 2.80e-19 85.9
Msa1184070 MtrunA17_Chr5g0416391 47.059 102 48 1 132 233 69 164 5.07e-19 85.1
Msa1184070 MtrunA17_Chr6g0453021 40.164 122 73 0 112 233 62 183 1.55e-18 83.6
Msa1184070 MtrunA17_Chr4g0060031 45.690 116 61 1 120 233 67 182 2.40e-18 84.0
Msa1184070 MtrunA17_Chr8g0362151 45.545 101 49 1 132 232 69 163 3.30e-18 82.8
Msa1184070 MtrunA17_Chr5g0415941 48.515 101 44 2 146 239 87 186 8.26e-18 82.4
Msa1184070 MtrunA17_Chr3g0123691 40.152 132 68 4 136 257 49 179 6.91e-17 79.3
Msa1184070 MtrunA17_Chr7g0265521 36.806 144 87 3 140 280 56 198 8.43e-17 78.2
Msa1184070 MtrunA17_Chr3g0119291 38.519 135 78 2 146 276 59 192 2.83e-16 77.0
Msa1184070 MtrunA17_Chr8g0381741 37.838 148 79 4 133 273 43 184 2.85e-16 77.8
Msa1184070 MtrunA17_Chr1g0179581 46.988 83 44 0 146 228 28 110 7.11e-16 72.4
Msa1184070 MtrunA17_Chr8g0362751 46.809 94 43 1 146 232 89 182 7.12e-16 76.3
Msa1184070 MtrunA17_Chr5g0403691 42.593 108 59 2 135 240 43 149 1.26e-12 66.2
Msa1184070 MtrunA17_Chr5g0403701 41.667 108 57 2 133 240 41 142 1.47e-12 65.5
Msa1184070 MtrunA17_Chr3g0127511 41.667 96 43 2 149 234 41 133 1.82e-11 63.2
Msa1184070 MtrunA17_Chr8g0346251 33.588 131 74 2 150 280 45 162 5.11e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1184070 AT3G60390.1 59.396 298 93 9 16 303 30 309 6.84e-102 301
Msa1184070 AT5G47370.1 53.674 313 87 14 1 301 3 269 5.44e-90 270
Msa1184070 AT2G44910.1 55.183 328 111 12 1 304 1 316 5.87e-88 266
Msa1184070 AT4G17460.1 52.769 307 98 11 1 299 3 270 4.42e-85 257
Msa1184070 AT4G16780.1 55.738 305 86 10 1 296 2 266 1.86e-83 253
Msa1184070 AT5G06710.1 66.138 189 49 5 90 271 134 314 6.76e-73 228
Msa1184070 AT4G37790.1 60.795 176 59 3 120 295 106 271 1.55e-65 207
Msa1184070 AT2G22800.1 75.833 120 28 1 140 259 107 225 3.82e-61 196
Msa1184070 AT2G01430.1 50.538 186 80 5 91 274 88 263 1.10e-49 166
Msa1184070 AT1G70920.1 56.028 141 48 2 130 270 59 185 4.04e-41 142
Msa1184070 AT1G70920.2 56.028 141 48 2 130 270 29 155 4.29e-41 141
Msa1184070 AT5G06710.4 59.649 114 32 4 91 197 135 241 6.25e-30 114
Msa1184070 AT2G01430.2 53.846 91 39 2 109 197 101 190 7.76e-22 91.7
Msa1184070 AT1G69780.1 37.079 178 88 3 70 233 5 172 7.83e-22 93.6
Msa1184070 AT1G26960.1 44.444 117 56 2 120 233 48 158 5.43e-19 85.1
Msa1184070 AT3G01470.1 48.387 93 41 1 146 231 68 160 1.51e-17 81.3
Msa1184070 AT5G65310.1 42.478 113 58 1 128 233 54 166 5.17e-17 80.5
Msa1184070 AT5G65310.2 42.478 113 58 1 128 233 36 148 5.76e-17 80.1
Msa1184070 AT5G15150.1 47.872 94 45 1 146 235 115 208 5.02e-16 77.4
Msa1184070 AT3G01220.1 45.745 94 47 1 146 235 87 180 2.23e-15 75.5
Msa1184070 AT5G03790.1 43.820 89 50 0 146 234 77 165 3.00e-15 74.3
Msa1184070 AT2G18550.1 43.137 102 53 1 140 241 55 151 8.71e-15 72.4
Msa1184070 AT4G40060.1 43.299 97 48 1 144 233 57 153 1.40e-14 73.2
Msa1184070 AT1G27045.4 45.833 96 45 1 146 234 68 163 2.75e-14 71.6
Msa1184070 AT1G27045.1 56.061 66 29 0 146 211 68 133 3.68e-14 70.9
Msa1184070 AT1G27045.5 56.061 66 29 0 146 211 25 90 5.17e-14 69.7
Msa1184070 AT1G27045.3 56.061 66 29 0 146 211 25 90 5.17e-14 69.7
Msa1184070 AT2G22430.1 45.833 96 48 1 144 235 60 155 5.41e-14 71.6
Msa1184070 AT1G27045.2 56.061 66 29 0 146 211 17 82 5.67e-14 69.3
Msa1184070 AT2G36610.1 36.937 111 58 2 136 234 57 167 2.19e-13 67.8
Msa1184070 AT2G46680.1 42.105 95 51 1 149 239 35 129 5.22e-13 68.2
Msa1184070 AT2G46680.2 42.045 88 51 0 149 236 35 122 6.81e-13 67.8
Msa1184070 AT4G36740.2 40.385 104 55 2 138 241 50 146 6.84e-13 67.0
Msa1184070 AT4G36740.1 40.385 104 55 2 138 241 49 145 7.07e-13 67.0
Msa1184070 AT5G03790.2 41.758 91 53 0 146 236 77 167 2.51e-12 65.1
Msa1184070 AT3G61890.1 33.333 126 84 0 149 274 33 158 1.71e-11 63.5
Msa1184070 AT5G06710.2 45.000 100 41 4 91 183 135 227 2.47e-11 63.2
Msa1184070 AT5G06710.3 45.000 100 41 4 91 183 135 227 2.47e-11 63.2

Find 129 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATGGTCGGGAACGATTT+TGG 0.169525 8_1:+19601782 None:intergenic
CAGAACATTAGGTTGGTTTA+TGG 0.183351 8_1:+19604252 None:intergenic
TTATAGTATAAATATGATTT+TGG 0.193608 8_1:-19604409 Msa1184070:five_prime_UTR
AAGAAGGGAAGGACAGAAAA+TGG 0.263745 8_1:+19604187 None:intergenic
TAACCTTGAAAGGATGAAAA+AGG 0.268132 8_1:-19601426 Msa1184070:three_prime_UTR
GAAAGATGATGAATTTAGTT+TGG 0.275241 8_1:-19604084 Msa1184070:CDS
ACTTTAGAGTGTGTAAAGTT+TGG 0.319254 8_1:-19601502 Msa1184070:three_prime_UTR
ATTCAAACAAGAGAACAAAA+TGG 0.338276 8_1:-19604111 Msa1184070:exon
CACTTCAGTTTGCTTCAACT+TGG 0.366945 8_1:+19602089 None:intergenic
TTAAGCTTGAGTTTAGGATT+TGG 0.367633 8_1:-19604059 Msa1184070:CDS
AAAGATGATGAATTTAGTTT+GGG 0.373079 8_1:-19604083 Msa1184070:CDS
CTTTGGTTTGTAACCGTTTG+AGG 0.393528 8_1:+19603978 None:intergenic
TGCGGCGGCCGTCGCCGCCA+TGG 0.395192 8_1:+19603395 None:intergenic
GCTAGACAAATGTGTATGTT+TGG 0.400019 8_1:-19601708 Msa1184070:three_prime_UTR
AAAAGGAAGTGCAAGAGCTT+AGG 0.411234 8_1:-19602008 Msa1184070:CDS
TTGGGTTTAAGCTTGAGTTT+AGG 0.412484 8_1:-19604065 Msa1184070:CDS
TCTGCTTCAGCCAACCAGTC+AGG 0.412655 8_1:-19601856 Msa1184070:CDS
GGCCAACACCTGTCAACCCT+TGG 0.414534 8_1:-19601819 Msa1184070:CDS
TTTGTGCATGTTTGGTATCA+AGG 0.418072 8_1:+19601620 None:intergenic
TATAAGAAATGGAGGAAAGA+TGG 0.424033 8_1:+19604282 None:intergenic
CTATATATAGATACATACTA+TGG 0.429771 8_1:+19604307 None:intergenic
GAGTCACCTTCAAAGGAGTT+TGG 0.430355 8_1:+19604015 None:intergenic
AGTGTATGTCACAGAACATT+AGG 0.432226 8_1:+19604241 None:intergenic
AACCACACCTCCACTTGTCT+TGG 0.434860 8_1:+19602793 None:intergenic
TGGATGGGGTTGGGCAGCTA+TGG 0.436143 8_1:+19604207 None:intergenic
GACAGAAAATGGATGGGGTT+GGG 0.438980 8_1:+19604198 None:intergenic
AAAGGAAGTGCAAGAGCTTA+GGG 0.439484 8_1:-19602007 Msa1184070:CDS
AGTTATTGAAGGAAACCCTT+TGG 0.441554 8_1:+19603961 None:intergenic
AACACTTGGGCCTGACTGGT+TGG 0.442499 8_1:+19601846 None:intergenic
GGTGTTGGCCGTTGAACACT+TGG 0.442745 8_1:+19601832 None:intergenic
CAACAACCAAACTCCTTTGA+AGG 0.444372 8_1:-19604021 Msa1184070:CDS
GTTGTTGGAAGAAACTTTCA+AGG 0.454317 8_1:-19603157 Msa1184070:CDS
ATGGAGAACAGTATAAGAAA+TGG 0.455065 8_1:+19604271 None:intergenic
ATGCTTGACACGGTGCTGTT+CGG 0.456039 8_1:+19603345 None:intergenic
AGCAGCAGCAGCTGCTGATG+AGG 0.465286 8_1:+19601885 None:intergenic
TTTAATTTATTAACCTTGAA+AGG 0.467349 8_1:-19601436 Msa1184070:three_prime_UTR
AAGTTTGGAAATGTTAAAGT+AGG 0.470317 8_1:-19601487 Msa1184070:three_prime_UTR
GCGGCCGTCGCCGCCATGGA+TGG 0.472789 8_1:+19603399 None:intergenic
TTCAAACAAGAGAACAAAAT+GGG 0.475273 8_1:-19604110 Msa1184070:exon
GCCCAAGGGTTGACAGGTGT+TGG 0.475640 8_1:+19601817 None:intergenic
GCCAACACCTGTCAACCCTT+GGG 0.479663 8_1:-19601818 Msa1184070:CDS
GATGATGACGGCGGAGGTTG+CGG 0.480696 8_1:-19603234 Msa1184070:CDS
AGACTCTAACTGATGAGAAT+AGG 0.482124 8_1:-19602038 Msa1184070:CDS
TCGCTCTAGATCCTAGTAGC+AGG 0.490208 8_1:-19601756 Msa1184070:three_prime_UTR
TTTGCACTTTACTTTAGTGT+TGG 0.490927 8_1:-19601581 Msa1184070:three_prime_UTR
TTGAGTAAAACATGTTCTCT+AGG 0.495487 8_1:+19601524 None:intergenic
GGTTCATGTTCTCGCGGCGG+CGG 0.496150 8_1:-19603264 Msa1184070:CDS
GAAGGAACAGTCAATGTTGT+TGG 0.498061 8_1:-19603172 Msa1184070:CDS
TCTAGGCCCAAAATAAGAAA+AGG 0.498219 8_1:+19601541 None:intergenic
ATTGCCGCCCAAGGGTTGAC+AGG 0.503094 8_1:+19601811 None:intergenic
AATGTGTATGTTTGGATTCG+CGG 0.503128 8_1:-19601700 Msa1184070:three_prime_UTR
TTCATTTGCATGTAGAGTTG+TGG 0.503551 8_1:+19601970 None:intergenic
TCATTTCTCCGCGGAATAGA+CGG 0.512734 8_1:-19603435 Msa1184070:CDS
GGCGGAGGTTGCGGTGGTGA+CGG 0.513641 8_1:-19603225 Msa1184070:CDS
GCCTACATTACCCTGCTACT+AGG 0.514296 8_1:+19601745 None:intergenic
TGAAAACGACGCCGTCGAAA+GGG 0.514530 8_1:-19603286 Msa1184070:CDS
TGGATAGACATTGCCGCCCA+AGG 0.515878 8_1:+19601802 None:intergenic
CTTTCCACTGATGCTTGACA+CGG 0.517994 8_1:+19603335 None:intergenic
AGTAGCAGGGTAATGTAGGC+AGG 0.518984 8_1:-19601742 Msa1184070:three_prime_UTR
GGACAGAAAATGGATGGGGT+TGG 0.520522 8_1:+19604197 None:intergenic
AAAATGGAACAAGTTATTGA+AGG 0.520682 8_1:+19603950 None:intergenic
AGGGAAGGACAGAAAATGGA+TGG 0.521815 8_1:+19604191 None:intergenic
AGAAGCGAAAGAGAAGGAAA+CGG 0.525139 8_1:-19603312 Msa1184070:CDS
TATGGAGAAGAGAAATGAAA+GGG 0.529781 8_1:+19604325 None:intergenic
CATGCACAAGCCTCCTCAAA+CGG 0.530251 8_1:-19603991 Msa1184070:CDS
GGAGCATAATACTCTGAATC+CGG 0.531921 8_1:-19603136 Msa1184070:intron
TCCTAGTAGCAGGGTAATGT+AGG 0.538525 8_1:-19601746 Msa1184070:three_prime_UTR
GCCGCATTCGACGATGAAAA+CGG 0.539309 8_1:-19603378 Msa1184070:CDS
CGCTCTAGATCCTAGTAGCA+GGG 0.540099 8_1:-19601755 Msa1184070:three_prime_UTR
TGCATGTGAGTCACCTTCAA+AGG 0.543980 8_1:+19604008 None:intergenic
ATAAGAAATGGAGGAAAGAT+GGG 0.544830 8_1:+19604283 None:intergenic
ACTACCATCCATGGCGGCGA+CGG 0.547385 8_1:-19603403 Msa1184070:CDS
TGACTGGTTGGCTGAAGCAG+AGG 0.549119 8_1:+19601858 None:intergenic
CAACACTCCACTACCATCCA+TGG 0.551656 8_1:-19603412 Msa1184070:CDS
TAGAGCGAATACTCATGGTC+GGG 0.553208 8_1:+19601771 None:intergenic
CTCTAACTGATGAGAATAGG+AGG 0.555223 8_1:-19602035 Msa1184070:CDS
TATGTCACAGAACATTAGGT+TGG 0.557002 8_1:+19604245 None:intergenic
GACTGGTTGGCTGAAGCAGA+GGG 0.557071 8_1:+19601859 None:intergenic
TCAGAAACAAAAGCAAGCAT+TGG 0.557840 8_1:-19602836 Msa1184070:intron
GTCGCCGCCATGGATGGTAG+TGG 0.558543 8_1:+19603405 None:intergenic
GAGAACAGTATAAGAAATGG+AGG 0.560086 8_1:+19604274 None:intergenic
GGAAAGAGAAGCGAAAGAGA+AGG 0.564040 8_1:-19603318 Msa1184070:CDS
TGAGAATAGGAGGTTGCAAA+AGG 0.565911 8_1:-19602025 Msa1184070:CDS
CTCAAACGGTTACAAACCAA+AGG 0.569424 8_1:-19603977 Msa1184070:CDS
GGATCTAGAGCGAATACTCA+TGG 0.570023 8_1:+19601766 None:intergenic
ATGAAAACGACGCCGTCGAA+AGG 0.571630 8_1:-19603287 Msa1184070:CDS
GGATAGACATTGCCGCCCAA+GGG 0.571951 8_1:+19601803 None:intergenic
GAGAAGAGAAATGAAAGGGA+TGG 0.572591 8_1:+19604329 None:intergenic
GGGCACATTGTAAGAGTGGT+GGG 0.573198 8_1:+19601943 None:intergenic
CAAGTTGAAGCAAACTGAAG+TGG 0.573772 8_1:-19602088 Msa1184070:CDS
CTAGAGCGAATACTCATGGT+CGG 0.575049 8_1:+19601770 None:intergenic
CTATGGAGAAGAGAAATGAA+AGG 0.581254 8_1:+19604324 None:intergenic
GGGAAGGACAGAAAATGGAT+GGG 0.582014 8_1:+19604192 None:intergenic
TGGGCAGCTATGGACTATGA+TGG 0.585257 8_1:+19604217 None:intergenic
CGAAGGGCACATTGTAAGAG+TGG 0.588926 8_1:+19601939 None:intergenic
AACACCTGTCAACCCTTGGG+CGG 0.591322 8_1:-19601815 Msa1184070:CDS
TCAAACGGTTACAAACCAAA+GGG 0.592760 8_1:-19603976 Msa1184070:CDS
ACATTGTAAGAGTGGTGGGA+GGG 0.595529 8_1:+19601947 None:intergenic
GGAAGGACAGAAAATGGATG+GGG 0.596500 8_1:+19604193 None:intergenic
GTGTTGGCCGTTGAACACTT+GGG 0.596735 8_1:+19601833 None:intergenic
ACGGCGACACGCTCGCACGA+AGG 0.599222 8_1:+19601922 None:intergenic
AGCCAAGACAAGTGGAGGTG+TGG 0.599876 8_1:-19602795 Msa1184070:CDS
TGGTTTGTAACCGTTTGAGG+AGG 0.599884 8_1:+19603981 None:intergenic
AGCACCGTGTCAAGCATCAG+TGG 0.602338 8_1:-19603339 Msa1184070:CDS
AGGGCACATTGTAAGAGTGG+TGG 0.603305 8_1:+19601942 None:intergenic
AGTCAGGCCCAAGTGTTCAA+CGG 0.603538 8_1:-19601840 Msa1184070:CDS
TAGCAGGGTAATGTAGGCAG+GGG 0.609592 8_1:-19601740 Msa1184070:three_prime_UTR
AGAACATGAACCCCTTTCGA+CGG 0.611067 8_1:+19603275 None:intergenic
CACATTGTAAGAGTGGTGGG+AGG 0.613092 8_1:+19601946 None:intergenic
GAAAACGACGCCGTCGAAAG+GGG 0.619048 8_1:-19603285 Msa1184070:CDS
GTAGCAGGGTAATGTAGGCA+GGG 0.622800 8_1:-19601741 Msa1184070:three_prime_UTR
AAGGTATTAAGAAGAAGGGA+AGG 0.624463 8_1:+19604176 None:intergenic
GAATCTGAAGCCAAGACAAG+TGG 0.625066 8_1:-19602803 Msa1184070:CDS
GAAGAAGCTGAGGTTGTCGA+AGG 0.629748 8_1:-19603190 Msa1184070:CDS
GATGACGGCGGAGGTTGCGG+TGG 0.634690 8_1:-19603231 Msa1184070:CDS
AGTGATGATGATGACGGCGG+AGG 0.634764 8_1:-19603240 Msa1184070:CDS
TCTGAAGCCAAGACAAGTGG+AGG 0.635230 8_1:-19602800 Msa1184070:CDS
GTGGTGACGGTGATTCGTCA+AGG 0.643931 8_1:-19603212 Msa1184070:CDS
ATTCGTCAAGGAAGAAGCTG+AGG 0.662832 8_1:-19603200 Msa1184070:CDS
GAAAGGGGTTCATGTTCTCG+CGG 0.668678 8_1:-19603270 Msa1184070:CDS
GGCGGAAGTGATGATGATGA+CGG 0.668902 8_1:-19603246 Msa1184070:CDS
GGTTTCAAAACAGAAGAGCA+AGG 0.676969 8_1:-19602774 Msa1184070:intron
CAGATCTAAGCACAGAAACG+AGG 0.678976 8_1:-19603458 Msa1184070:CDS
TGGTTGGCTGAAGCAGAGGG+AGG 0.685549 8_1:+19601862 None:intergenic
TGAGGACGATGCAGATGACA+CGG 0.688825 8_1:+19601903 None:intergenic
AGGGGTTCATGTTCTCGCGG+CGG 0.699189 8_1:-19603267 Msa1184070:CDS
CACTCCACTACCATCCATGG+CGG 0.704044 8_1:-19603409 Msa1184070:CDS
GGAAGTGATGATGATGACGG+CGG 0.716365 8_1:-19603243 Msa1184070:CDS
GAAACGAGGTCATTTCTCCG+CGG 0.771153 8_1:-19603444 Msa1184070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAAAATAAAAAAAAAA+TGG + chr8_1:19602121-19602140 None:intergenic 0.0%
!! AAAAGAAAAAAGAAACAAAA+AGG + chr8_1:19601672-19601691 None:intergenic 15.0%
!! AAAAAAAAAATTAAGGAGAA+AGG + chr8_1:19601940-19601959 None:intergenic 15.0%
!! TCAGAACAAAAAAAAAATTA+AGG + chr8_1:19601947-19601966 None:intergenic 15.0%
!!! ATTTCTCTTCATATTTTTTA+GGG - chr8_1:19601982-19602001 Msa1184070:CDS 15.0%
!!! TCATTTTTGGTTTTTTTTTT+TGG - chr8_1:19602026-19602045 Msa1184070:CDS 15.0%
!!! CATTTTTGGTTTTTTTTTTT+GGG - chr8_1:19602027-19602046 Msa1184070:CDS 15.0%
!!! TTTTTCATTATATGATTCAA+GGG + chr8_1:19602094-19602113 None:intergenic 15.0%
!! GTAATTATCAACTAAATTTA+AGG + chr8_1:19602310-19602329 None:intergenic 15.0%
!!! TTGTTTTTATTATTGTTTTG+AGG - chr8_1:19602835-19602854 Msa1184070:CDS 15.0%
!!! GTCATTTTTGAATATTAATT+TGG - chr8_1:19603104-19603123 Msa1184070:intron 15.0%
!!! TTATTATAATCTTTTGATGA+TGG - chr8_1:19603479-19603498 Msa1184070:intron 15.0%
!!! TTTAATTTATTAACCTTGAA+AGG - chr8_1:19604390-19604409 Msa1184070:five_prime_UTR 15.0%
!! CTATATATAGATACATACTA+TGG + chr8_1:19601522-19601541 None:intergenic 20.0%
!!! AAAGATGATGAATTTAGTTT+GGG - chr8_1:19601743-19601762 Msa1184070:three_prime_UTR 20.0%
!!! GATTTCTCTTCATATTTTTT+AGG - chr8_1:19601981-19602000 Msa1184070:CDS 20.0%
!! AAAAACCAAAAATGAGAAAT+GGG + chr8_1:19602021-19602040 None:intergenic 20.0%
!! AAAAAACCAAAAATGAGAAA+TGG + chr8_1:19602022-19602041 None:intergenic 20.0%
!!! GTTTTTCATTATATGATTCA+AGG + chr8_1:19602095-19602114 None:intergenic 20.0%
!!! TGTAATTCAGTTTTATGTTA+AGG - chr8_1:19602736-19602755 Msa1184070:intron 20.0%
!!! GTAATTCAGTTTTATGTTAA+GGG - chr8_1:19602737-19602756 Msa1184070:intron 20.0%
!!! TATATTTGGAAGTGTAAATT+TGG - chr8_1:19602792-19602811 Msa1184070:CDS 20.0%
!!! TTTTTTGGTTGAGTAATTTA+AGG - chr8_1:19602878-19602897 Msa1184070:intron 20.0%
!! TTTATGAGGAGTAAAAAATT+AGG - chr8_1:19603354-19603373 Msa1184070:CDS 20.0%
!! TGTAAACTCTTAAAATTGAA+AGG + chr8_1:19603527-19603546 None:intergenic 20.0%
!!! CAAAAAGGTATTAAGAAGAA+GGG + chr8_1:19601657-19601676 None:intergenic 25.0%
!!! ACAAAAAGGTATTAAGAAGA+AGG + chr8_1:19601658-19601677 None:intergenic 25.0%
!!! TTGTTTGAATTTTGAAGAAG+GGG + chr8_1:19601705-19601724 None:intergenic 25.0%
!!! CTTGTTTGAATTTTGAAGAA+GGG + chr8_1:19601706-19601725 None:intergenic 25.0%
!!! TCTTGTTTGAATTTTGAAGA+AGG + chr8_1:19601707-19601726 None:intergenic 25.0%
! ATTCAAACAAGAGAACAAAA+TGG - chr8_1:19601715-19601734 Msa1184070:three_prime_UTR 25.0%
! TTCAAACAAGAGAACAAAAT+GGG - chr8_1:19601716-19601735 Msa1184070:three_prime_UTR 25.0%
! GAAAGATGATGAATTTAGTT+TGG - chr8_1:19601742-19601761 Msa1184070:three_prime_UTR 25.0%
! AAAATGGAACAAGTTATTGA+AGG + chr8_1:19601879-19601898 None:intergenic 25.0%
!!! AATAACTTGTTCCATTTTCA+TGG - chr8_1:19601881-19601900 Msa1184070:CDS 25.0%
! GAAAAAACATACCATGAAAA+TGG + chr8_1:19601895-19601914 None:intergenic 25.0%
! GAAAGGAAACATAGAAATTT+AGG + chr8_1:19601923-19601942 None:intergenic 25.0%
! TATGAAGAGAAATCAAGAAT+GGG + chr8_1:19601975-19601994 None:intergenic 25.0%
! ATATGAAGAGAAATCAAGAA+TGG + chr8_1:19601976-19601995 None:intergenic 25.0%
! AAAACCAAAAATGAGAAATG+GGG + chr8_1:19602020-19602039 None:intergenic 25.0%
! TTCATCTCATCAAAGAAAAT+GGG + chr8_1:19602196-19602215 None:intergenic 25.0%
! ATTCATCTCATCAAAGAAAA+TGG + chr8_1:19602197-19602216 None:intergenic 25.0%
!! TTTTATGTTAAGGGCTTATT+TGG - chr8_1:19602746-19602765 Msa1184070:intron 25.0%
!! CTTATTTGGAATTTCATTAC+AGG - chr8_1:19602760-19602779 Msa1184070:intron 25.0%
! GAATTTCATTACAGGATAAA+AGG - chr8_1:19602768-19602787 Msa1184070:intron 25.0%
! ACTGTTTGGATCATATTAAT+TGG - chr8_1:19603225-19603244 Msa1184070:CDS 25.0%
!! AACACAACTTAACTTTTATG+AGG - chr8_1:19603340-19603359 Msa1184070:CDS 25.0%
!!! ATAATCTTTTGATGATGGAT+TGG - chr8_1:19603484-19603503 Msa1184070:intron 25.0%
!!! TAATCTTTTGATGATGGATT+GGG - chr8_1:19603485-19603504 Msa1184070:intron 25.0%
! AAGTTTGGAAATGTTAAAGT+AGG - chr8_1:19604339-19604358 Msa1184070:five_prime_UTR 25.0%
TATGGAGAAGAGAAATGAAA+GGG + chr8_1:19601504-19601523 None:intergenic 30.0%
ATAAGAAATGGAGGAAAGAT+GGG + chr8_1:19601546-19601565 None:intergenic 30.0%
TATAAGAAATGGAGGAAAGA+TGG + chr8_1:19601547-19601566 None:intergenic 30.0%
ATGGAGAACAGTATAAGAAA+TGG + chr8_1:19601558-19601577 None:intergenic 30.0%
!! TGTTTGAATTTTGAAGAAGG+GGG + chr8_1:19601704-19601723 None:intergenic 30.0%
! TTAAGCTTGAGTTTAGGATT+TGG - chr8_1:19601767-19601786 Msa1184070:exon 30.0%
!!! GGTTTTTTTTTTTGGGTGAA+TGG - chr8_1:19602034-19602053 Msa1184070:CDS 30.0%
!!! TTTTTTTTGGGTGAATGGTA+AGG - chr8_1:19602039-19602058 Msa1184070:CDS 30.0%
!!! TTTTTTTGGGTGAATGGTAA+GGG - chr8_1:19602040-19602059 Msa1184070:CDS 30.0%
GTTATACCAAAAATGAGAAG+GGG + chr8_1:19602072-19602091 None:intergenic 30.0%
GGTTATACCAAAAATGAGAA+GGG + chr8_1:19602073-19602092 None:intergenic 30.0%
ACAGGATAAAAGGCTATATT+TGG - chr8_1:19602778-19602797 Msa1184070:CDS 30.0%
!!! ATTGTTTTGAGGTTATTCTG+AGG - chr8_1:19602846-19602865 Msa1184070:intron 30.0%
!!! CTGAGGTTGTCTTTTTTTTT+TGG - chr8_1:19602863-19602882 Msa1184070:intron 30.0%
TAAACATTGTTGTGATGTTG+TGG - chr8_1:19603138-19603157 Msa1184070:CDS 30.0%
TAATATGATCCAAACAGTGT+GGG + chr8_1:19603223-19603242 None:intergenic 30.0%
TTAATATGATCCAAACAGTG+TGG + chr8_1:19603224-19603243 None:intergenic 30.0%
GTTGTATTGTAACAAGTATG+TGG - chr8_1:19603394-19603413 Msa1184070:CDS 30.0%
! TACATTTTTGTGCATGTAGT+AGG + chr8_1:19603450-19603469 None:intergenic 30.0%
! TTGTAGCTTTTGTAGAATCA+TGG - chr8_1:19604154-19604173 Msa1184070:five_prime_UTR 30.0%
!! GATTCATTTTTGTGCATGTT+TGG + chr8_1:19604217-19604236 None:intergenic 30.0%
TTTGCACTTTACTTTAGTGT+TGG - chr8_1:19604245-19604264 Msa1184070:five_prime_UTR 30.0%
!! AGTCTAGCCTTTTCTTATTT+TGG - chr8_1:19604278-19604297 Msa1184070:five_prime_UTR 30.0%
!!! GTCTAGCCTTTTCTTATTTT+GGG - chr8_1:19604279-19604298 Msa1184070:five_prime_UTR 30.0%
TTGAGTAAAACATGTTCTCT+AGG + chr8_1:19604305-19604324 None:intergenic 30.0%
!! ACTTTAGAGTGTGTAAAGTT+TGG - chr8_1:19604324-19604343 Msa1184070:five_prime_UTR 30.0%
TAACCTTGAAAGGATGAAAA+AGG - chr8_1:19604400-19604419 Msa1184070:five_prime_UTR 30.0%
CTATGGAGAAGAGAAATGAA+AGG + chr8_1:19601505-19601524 None:intergenic 35.0%
GAGAACAGTATAAGAAATGG+AGG + chr8_1:19601555-19601574 None:intergenic 35.0%
!! CAGAACATTAGGTTGGTTTA+TGG + chr8_1:19601577-19601596 None:intergenic 35.0%
TATGTCACAGAACATTAGGT+TGG + chr8_1:19601584-19601603 None:intergenic 35.0%
AGTGTATGTCACAGAACATT+AGG + chr8_1:19601588-19601607 None:intergenic 35.0%
! AAGGTATTAAGAAGAAGGGA+AGG + chr8_1:19601653-19601672 None:intergenic 35.0%
!! TTTGAATTTTGAAGAAGGGG+GGG + chr8_1:19601702-19601721 None:intergenic 35.0%
!! GTTTGAATTTTGAAGAAGGG+GGG + chr8_1:19601703-19601722 None:intergenic 35.0%
TTGGGTTTAAGCTTGAGTTT+AGG - chr8_1:19601761-19601780 Msa1184070:three_prime_UTR 35.0%
TCAAACGGTTACAAACCAAA+GGG - chr8_1:19601850-19601869 Msa1184070:CDS 35.0%
AGTTATTGAAGGAAACCCTT+TGG + chr8_1:19601868-19601887 None:intergenic 35.0%
! AGAACCCCATTTCTCATTTT+TGG - chr8_1:19602013-19602032 Msa1184070:CDS 35.0%
!!! TTTTTTGGGTGAATGGTAAG+GGG - chr8_1:19602041-19602060 Msa1184070:CDS 35.0%
GGGTTATACCAAAAATGAGA+AGG + chr8_1:19602074-19602093 None:intergenic 35.0%
!! TTTGCATGTGAGTGTTTTAG+TGG + chr8_1:19602340-19602359 None:intergenic 35.0%
GTTGTTGGAAGAAACTTTCA+AGG - chr8_1:19602669-19602688 Msa1184070:intron 35.0%
TCAGAAACAAAAGCAAGCAT+TGG - chr8_1:19602990-19603009 Msa1184070:intron 35.0%
AATATGATCCAAACAGTGTG+GGG + chr8_1:19603222-19603241 None:intergenic 35.0%
ACATGAGTATGTTAGGACTT+AGG - chr8_1:19603419-19603438 Msa1184070:CDS 35.0%
CATGAGTATGTTAGGACTTA+GGG - chr8_1:19603420-19603439 Msa1184070:CDS 35.0%
! TTTTTGTGCATGTAGTAGGT+GGG + chr8_1:19603446-19603465 None:intergenic 35.0%
! ATTTTTGTGCATGTAGTAGG+TGG + chr8_1:19603447-19603466 None:intergenic 35.0%
CATGTACAAACCAATGTATG+TGG - chr8_1:19603606-19603625 Msa1184070:intron 35.0%
CACAACAAATCCACATACAT+TGG + chr8_1:19603619-19603638 None:intergenic 35.0%
TATTGTGTTCCATGCTGTTA+TGG - chr8_1:19603666-19603685 Msa1184070:intron 35.0%
! TTTTTCCTTCCATAACAGCA+TGG + chr8_1:19603678-19603697 None:intergenic 35.0%
AAAATGTGACATGAGTGCTT+TGG - chr8_1:19603699-19603718 Msa1184070:intron 35.0%
AGACTCTAACTGATGAGAAT+AGG - chr8_1:19603788-19603807 Msa1184070:intron 35.0%
TTCATTTGCATGTAGAGTTG+TGG + chr8_1:19603859-19603878 None:intergenic 35.0%
GCTAGACAAATGTGTATGTT+TGG - chr8_1:19604118-19604137 Msa1184070:five_prime_UTR 35.0%
AATGTGTATGTTTGGATTCG+CGG - chr8_1:19604126-19604145 Msa1184070:five_prime_UTR 35.0%
TTTGTGCATGTTTGGTATCA+AGG + chr8_1:19604209-19604228 None:intergenic 35.0%
TCTAGGCCCAAAATAAGAAA+AGG + chr8_1:19604288-19604307 None:intergenic 35.0%
!! TCTCCTTTTTCATCCTTTCA+AGG + chr8_1:19604406-19604425 None:intergenic 35.0%
GAGAAGAGAAATGAAAGGGA+TGG + chr8_1:19601500-19601519 None:intergenic 40.0%
AAGAAGGGAAGGACAGAAAA+TGG + chr8_1:19601642-19601661 None:intergenic 40.0%
!! TTGAATTTTGAAGAAGGGGG+GGG + chr8_1:19601701-19601720 None:intergenic 40.0%
CAACAACCAAACTCCTTTGA+AGG - chr8_1:19601805-19601824 Msa1184070:CDS 40.0%
!! CTTTGGTTTGTAACCGTTTG+AGG + chr8_1:19601851-19601870 None:intergenic 40.0%
CTCAAACGGTTACAAACCAA+AGG - chr8_1:19601849-19601868 Msa1184070:CDS 40.0%
! GAAAAGCCCCTTCTCATTTT+TGG - chr8_1:19602063-19602082 Msa1184070:CDS 40.0%
AGAAGCGAAAGAGAAGGAAA+CGG - chr8_1:19602514-19602533 Msa1184070:intron 40.0%
GAAGGAACAGTCAATGTTGT+TGG - chr8_1:19602654-19602673 Msa1184070:intron 40.0%
GGAGCATAATACTCTGAATC+CGG - chr8_1:19602690-19602709 Msa1184070:intron 40.0%
TACCACTACAACAAACTCAC+CGG + chr8_1:19602712-19602731 None:intergenic 40.0%
GGTTTCAAAACAGAAGAGCA+AGG - chr8_1:19603052-19603071 Msa1184070:intron 40.0%
ACAGTGTGGGGTATATAGTA+TGG + chr8_1:19603210-19603229 None:intergenic 40.0%
ACTATATACCCCACACTGTT+TGG - chr8_1:19603211-19603230 Msa1184070:CDS 40.0%
TGTGGCAACATGAGTATGTT+AGG - chr8_1:19603412-19603431 Msa1184070:CDS 40.0%
!!! CTTTTGATGATGGATTGGGA+AGG - chr8_1:19603489-19603508 Msa1184070:intron 40.0%
! CACTTCAGTTTGCTTCAACT+TGG + chr8_1:19603740-19603759 None:intergenic 40.0%
! CAAGTTGAAGCAAACTGAAG+TGG - chr8_1:19603738-19603757 Msa1184070:intron 40.0%
CTCTAACTGATGAGAATAGG+AGG - chr8_1:19603791-19603810 Msa1184070:intron 40.0%
TGAGAATAGGAGGTTGCAAA+AGG - chr8_1:19603801-19603820 Msa1184070:intron 40.0%
! AAAAGGAAGTGCAAGAGCTT+AGG - chr8_1:19603818-19603837 Msa1184070:intron 40.0%
! AAAGGAAGTGCAAGAGCTTA+GGG - chr8_1:19603819-19603838 Msa1184070:intron 40.0%
GACAGAAAATGGATGGGGTT+GGG + chr8_1:19601631-19601650 None:intergenic 45.0%
GGAAGGACAGAAAATGGATG+GGG + chr8_1:19601636-19601655 None:intergenic 45.0%
GGGAAGGACAGAAAATGGAT+GGG + chr8_1:19601637-19601656 None:intergenic 45.0%
AGGGAAGGACAGAAAATGGA+TGG + chr8_1:19601638-19601657 None:intergenic 45.0%
GAGTCACCTTCAAAGGAGTT+TGG + chr8_1:19601814-19601833 None:intergenic 45.0%
TGCATGTGAGTCACCTTCAA+AGG + chr8_1:19601821-19601840 None:intergenic 45.0%
! TGGTTTGTAACCGTTTGAGG+AGG + chr8_1:19601848-19601867 None:intergenic 45.0%
CAGATCTAAGCACAGAAACG+AGG - chr8_1:19602368-19602387 Msa1184070:intron 45.0%
TCATTTCTCCGCGGAATAGA+CGG - chr8_1:19602391-19602410 Msa1184070:intron 45.0%
! TCCGTTTTCATCGTCGAATG+CGG + chr8_1:19602452-19602471 None:intergenic 45.0%
CTTTCCACTGATGCTTGACA+CGG + chr8_1:19602494-19602513 None:intergenic 45.0%
GGAAAGAGAAGCGAAAGAGA+AGG - chr8_1:19602508-19602527 Msa1184070:intron 45.0%
AGAACATGAACCCCTTTCGA+CGG + chr8_1:19602554-19602573 None:intergenic 45.0%
ATTCGTCAAGGAAGAAGCTG+AGG - chr8_1:19602626-19602645 Msa1184070:intron 45.0%
!! ATCCGGTGAGTTTGTTGTAG+TGG - chr8_1:19602707-19602726 Msa1184070:intron 45.0%
! GAATCTGAAGCCAAGACAAG+TGG - chr8_1:19603023-19603042 Msa1184070:intron 45.0%
AGGTGAGCTTTCTTCTTCTC+AGG - chr8_1:19603072-19603091 Msa1184070:intron 45.0%
GGTGAGCTTTCTTCTTCTCA+GGG - chr8_1:19603073-19603092 Msa1184070:intron 45.0%
GTGAGCTTTCTTCTTCTCAG+GGG - chr8_1:19603074-19603093 Msa1184070:intron 45.0%
GTGTTCCATGCTGTTATGGA+AGG - chr8_1:19603670-19603689 Msa1184070:intron 45.0%
! GTGCTTTGGTTCAATGATGC+AGG - chr8_1:19603713-19603732 Msa1184070:intron 45.0%
! ACATTGTAAGAGTGGTGGGA+GGG + chr8_1:19603882-19603901 None:intergenic 45.0%
TAGAGCGAATACTCATGGTC+GGG + chr8_1:19604058-19604077 None:intergenic 45.0%
CTAGAGCGAATACTCATGGT+CGG + chr8_1:19604059-19604078 None:intergenic 45.0%
! GGATCTAGAGCGAATACTCA+TGG + chr8_1:19604063-19604082 None:intergenic 45.0%
TCCTAGTAGCAGGGTAATGT+AGG - chr8_1:19604080-19604099 Msa1184070:CDS 45.0%
!! TATTTATTTATGAATTAAAA+CGG - chr8_1:19602265-19602284 Msa1184070:intron 5.0%
! TGGGCAGCTATGGACTATGA+TGG + chr8_1:19601612-19601631 None:intergenic 50.0%
GGACAGAAAATGGATGGGGT+TGG + chr8_1:19601632-19601651 None:intergenic 50.0%
CATGCACAAGCCTCCTCAAA+CGG - chr8_1:19601835-19601854 Msa1184070:CDS 50.0%
GAAACGAGGTCATTTCTCCG+CGG - chr8_1:19602382-19602401 Msa1184070:intron 50.0%
CAACACTCCACTACCATCCA+TGG - chr8_1:19602414-19602433 Msa1184070:intron 50.0%
! GTTTTCATCGTCGAATGCGG+CGG + chr8_1:19602449-19602468 None:intergenic 50.0%
GCCGCATTCGACGATGAAAA+CGG - chr8_1:19602448-19602467 Msa1184070:intron 50.0%
!! ATGCTTGACACGGTGCTGTT+CGG + chr8_1:19602484-19602503 None:intergenic 50.0%
ATGAAAACGACGCCGTCGAA+AGG - chr8_1:19602539-19602558 Msa1184070:intron 50.0%
TGAAAACGACGCCGTCGAAA+GGG - chr8_1:19602540-19602559 Msa1184070:intron 50.0%
GAAAGGGGTTCATGTTCTCG+CGG - chr8_1:19602556-19602575 Msa1184070:intron 50.0%
! GGCGGAAGTGATGATGATGA+CGG - chr8_1:19602580-19602599 Msa1184070:intron 50.0%
!! GGAAGTGATGATGATGACGG+CGG - chr8_1:19602583-19602602 Msa1184070:intron 50.0%
GAAGAAGCTGAGGTTGTCGA+AGG - chr8_1:19602636-19602655 Msa1184070:intron 50.0%
! TCTGAAGCCAAGACAAGTGG+AGG - chr8_1:19603026-19603045 Msa1184070:intron 50.0%
AACCACACCTCCACTTGTCT+TGG + chr8_1:19603036-19603055 None:intergenic 50.0%
! CACATTGTAAGAGTGGTGGG+AGG + chr8_1:19603883-19603902 None:intergenic 50.0%
GGGCACATTGTAAGAGTGGT+GGG + chr8_1:19603886-19603905 None:intergenic 50.0%
AGGGCACATTGTAAGAGTGG+TGG + chr8_1:19603887-19603906 None:intergenic 50.0%
! CGAAGGGCACATTGTAAGAG+TGG + chr8_1:19603890-19603909 None:intergenic 50.0%
TGAGGACGATGCAGATGACA+CGG + chr8_1:19603926-19603945 None:intergenic 50.0%
AGTCAGGCCCAAGTGTTCAA+CGG - chr8_1:19603986-19604005 Msa1184070:CDS 50.0%
! GTGTTGGCCGTTGAACACTT+GGG + chr8_1:19603996-19604015 None:intergenic 50.0%
! CTCATGGTCGGGAACGATTT+TGG + chr8_1:19604047-19604066 None:intergenic 50.0%
! TCGCTCTAGATCCTAGTAGC+AGG - chr8_1:19604070-19604089 Msa1184070:CDS 50.0%
! CGCTCTAGATCCTAGTAGCA+GGG - chr8_1:19604071-19604090 Msa1184070:CDS 50.0%
GCCTACATTACCCTGCTACT+AGG + chr8_1:19604084-19604103 None:intergenic 50.0%
AGTAGCAGGGTAATGTAGGC+AGG - chr8_1:19604084-19604103 Msa1184070:CDS 50.0%
GTAGCAGGGTAATGTAGGCA+GGG - chr8_1:19604085-19604104 Msa1184070:CDS 50.0%
TAGCAGGGTAATGTAGGCAG+GGG - chr8_1:19604086-19604105 Msa1184070:CDS 50.0%
! GAGTGTTGCCGTCTATTCCG+CGG + chr8_1:19602402-19602421 None:intergenic 55.0%
CACTCCACTACCATCCATGG+CGG - chr8_1:19602417-19602436 Msa1184070:intron 55.0%
AGCACCGTGTCAAGCATCAG+TGG - chr8_1:19602487-19602506 Msa1184070:intron 55.0%
GAAAACGACGCCGTCGAAAG+GGG - chr8_1:19602541-19602560 Msa1184070:intron 55.0%
!! AGTGATGATGATGACGGCGG+AGG - chr8_1:19602586-19602605 Msa1184070:intron 55.0%
!! GTGGTGACGGTGATTCGTCA+AGG - chr8_1:19602614-19602633 Msa1184070:intron 55.0%
AGCCAAGACAAGTGGAGGTG+TGG - chr8_1:19603031-19603050 Msa1184070:intron 55.0%
! GACTGGTTGGCTGAAGCAGA+GGG + chr8_1:19603970-19603989 None:intergenic 55.0%
! TGACTGGTTGGCTGAAGCAG+AGG + chr8_1:19603971-19603990 None:intergenic 55.0%
TCTGCTTCAGCCAACCAGTC+AGG - chr8_1:19603970-19603989 Msa1184070:CDS 55.0%
AACACTTGGGCCTGACTGGT+TGG + chr8_1:19603983-19604002 None:intergenic 55.0%
GTTGAACACTTGGGCCTGAC+TGG + chr8_1:19603987-19604006 None:intergenic 55.0%
!! GGTGTTGGCCGTTGAACACT+TGG + chr8_1:19603997-19604016 None:intergenic 55.0%
GCCAACACCTGTCAACCCTT+GGG - chr8_1:19604008-19604027 Msa1184070:CDS 55.0%
AACACCTGTCAACCCTTGGG+CGG - chr8_1:19604011-19604030 Msa1184070:CDS 55.0%
GGATAGACATTGCCGCCCAA+GGG + chr8_1:19604026-19604045 None:intergenic 55.0%
TGGATAGACATTGCCGCCCA+AGG + chr8_1:19604027-19604046 None:intergenic 55.0%
TGGATGGGGTTGGGCAGCTA+TGG + chr8_1:19601622-19601641 None:intergenic 60.0%
ACTACCATCCATGGCGGCGA+CGG - chr8_1:19602423-19602442 Msa1184070:intron 60.0%
AGGGGTTCATGTTCTCGCGG+CGG - chr8_1:19602559-19602578 Msa1184070:intron 60.0%
!! GATGATGACGGCGGAGGTTG+CGG - chr8_1:19602592-19602611 Msa1184070:intron 60.0%
AGCAGCAGCAGCTGCTGATG+AGG + chr8_1:19603944-19603963 None:intergenic 60.0%
! TGGTTGGCTGAAGCAGAGGG+AGG + chr8_1:19603967-19603986 None:intergenic 60.0%
GGCCAACACCTGTCAACCCT+TGG - chr8_1:19604007-19604026 Msa1184070:CDS 60.0%
GCCCAAGGGTTGACAGGTGT+TGG + chr8_1:19604012-19604031 None:intergenic 60.0%
ATTGCCGCCCAAGGGTTGAC+AGG + chr8_1:19604018-19604037 None:intergenic 60.0%
GTCGCCGCCATGGATGGTAG+TGG + chr8_1:19602424-19602443 None:intergenic 65.0%
GGTTCATGTTCTCGCGGCGG+CGG - chr8_1:19602562-19602581 Msa1184070:intron 65.0%
! GATGACGGCGGAGGTTGCGG+TGG - chr8_1:19602595-19602614 Msa1184070:intron 70.0%
GGCGGAGGTTGCGGTGGTGA+CGG - chr8_1:19602601-19602620 Msa1184070:intron 70.0%
CGGCGACACGCTCGCACGAA+GGG + chr8_1:19603906-19603925 None:intergenic 70.0%
ACGGCGACACGCTCGCACGA+AGG + chr8_1:19603907-19603926 None:intergenic 70.0%
! GCGGCCGTCGCCGCCATGGA+TGG + chr8_1:19602430-19602449 None:intergenic 80.0%
! TGCGGCGGCCGTCGCCGCCA+TGG + chr8_1:19602434-19602453 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 19601420 19604428 19601420 ID=Msa1184070;Name=Msa1184070
chr8_1 mRNA 19601420 19604428 19601420 ID=Msa1184070-mRNA-1;Parent=Msa1184070;Name=Msa1184070-mRNA-1;_AED=0.05;_eAED=0.05;_QI=314|1|1|1|1|1|4|363|306
chr8_1 exon 19601420 19602113 19601420 ID=Msa1184070-mRNA-1:exon:7611;Parent=Msa1184070-mRNA-1
chr8_1 exon 19602775 19602854 19602775 ID=Msa1184070-mRNA-1:exon:7610;Parent=Msa1184070-mRNA-1
chr8_1 exon 19603137 19603477 19603137 ID=Msa1184070-mRNA-1:exon:7609;Parent=Msa1184070-mRNA-1
chr8_1 exon 19603946 19604428 19603946 ID=Msa1184070-mRNA-1:exon:7608;Parent=Msa1184070-mRNA-1
chr8_1 five_prime_UTR 19604115 19604428 19604115 ID=Msa1184070-mRNA-1:five_prime_utr;Parent=Msa1184070-mRNA-1
chr8_1 CDS 19603946 19604114 19603946 ID=Msa1184070-mRNA-1:cds;Parent=Msa1184070-mRNA-1
chr8_1 CDS 19603137 19603477 19603137 ID=Msa1184070-mRNA-1:cds;Parent=Msa1184070-mRNA-1
chr8_1 CDS 19602775 19602854 19602775 ID=Msa1184070-mRNA-1:cds;Parent=Msa1184070-mRNA-1
chr8_1 CDS 19601783 19602113 19601783 ID=Msa1184070-mRNA-1:cds;Parent=Msa1184070-mRNA-1
chr8_1 three_prime_UTR 19601420 19601782 19601420 ID=Msa1184070-mRNA-1:three_prime_utr;Parent=Msa1184070-mRNA-1
Gene Sequence

>Msa1184070

ATGGGTGAGAAAGATGATGAATTTAGTTTGGGTTTAAGCTTGAGTTTAGGATTTGGAGAATATGCAAATAACAACAACCAAACTCCTTTGAAGGTGACTCACATGCACAAGCCTCCTCAAACGGTTACAAACCAAAGGGTTTCCTTCAATAACTTGTTCCATTTTCATGATCTAAGCACAGAAACGAGGTCATTTCTCCGCGGAATAGACGGCAACACTCCACTACCATCCATGGCGGCGACGGCCGCCGCATTCGACGATGAAAACGGAGTTTCATCACCGAACAGCACCGTGTCAAGCATCAGTGGAAAGAGAAGCGAAAGAGAAGGAAACGGAGATGAAAACGACGCCGTCGAAAGGGGTTCATGTTCTCGCGGCGGCGGAAGTGATGATGATGACGGCGGAGGTTGCGGTGGTGACGGTGATTCGTCAAGGAAGAAGCTGAGGTTGTCGAAGGAACAGTCAATGTTGTTGGAAGAAACTTTCAAGGAGCATAATACTCTGAATCCGAAACAAAAGCAAGCATTGGCAAAGCAGTTGAATCTGAAGCCAAGACAAGTGGAGGTGTGGTTTCAAAACAGAAGAGCAAGGACCAAGTTGAAGCAAACTGAAGTGGATTGTGAGTACTTGAAGAGATGCTGTGAGACTCTAACTGATGAGAATAGGAGGTTGCAAAAGGAAGTGCAAGAGCTTAGGGCATTGAAGTTATCTCCACAACTCTACATGCAAATGAACCCTCCCACCACTCTTACAATGTGCCCTTCGTGCGAGCGTGTCGCCGTGTCATCTGCATCGTCCTCATCAGCAGCTGCTGCTGCTCCTCCCTCTGCTTCAGCCAACCAGTCAGGCCCAAGTGTTCAACGGCCAACACCTGTCAACCCTTGGGCGGCAATGTCTATCCAAAATCGTTCCCGACCATGA
Protein sequence

>Msa1184070

MGEKDDEFSLGLSLSLGFGEYANNNNQTPLKVTHMHKPPQTVTNQRVSFNNLFHFHDLSTETRSFLRGIDGNTPLPSMAATAAAFDDENGVSSPNSTVSSISGKRSEREGNGDENDAVERGSCSRGGGSDDDDGGGCGGDGDSSRKKLRLSKEQSMLLEETFKEHNTLNPKQKQALAKQLNLKPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKEVQELRALKLSPQLYMQMNPPTTLTMCPSCERVAVSSASSSSAAAAAPPSASANQSGPSVQRPTPVNPWAAMSIQNRSRP*