AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1184180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1184180 MtrunA17_Chr8g0334881 84.013 319 19 1 6 292 1 319 1.38e-175 487
Msa1184180 MtrunA17_Chr4g0013361 47.667 300 129 10 6 283 1 294 1.14e-73 228
Msa1184180 MtrunA17_Chr1g0154031 56.075 107 46 1 15 121 76 181 2.11e-38 139
Msa1184180 MtrunA17_Chr3g0099131 53.704 108 49 1 14 121 40 146 1.34e-37 139
Msa1184180 MtrunA17_Chr1g0180391 54.783 115 46 3 6 119 14 123 7.30e-37 131
Msa1184180 MtrunA17_Chr8g0354661 53.271 107 49 1 15 121 37 142 1.25e-36 137
Msa1184180 MtrunA17_Chr7g0217221 44.853 136 73 2 11 145 8 142 1.99e-36 131
Msa1184180 MtrunA17_Chr4g0058631 45.062 162 76 5 7 161 4 159 2.41e-36 133
Msa1184180 MtrunA17_Chr5g0410961 51.754 114 52 2 11 124 8 118 3.06e-36 132
Msa1184180 MtrunA17_Chr1g0209661 42.520 127 72 1 3 129 15 140 4.35e-36 131
Msa1184180 MtrunA17_Chr7g0270891 53.043 115 53 1 7 121 4 117 1.00e-35 131
Msa1184180 MtrunA17_Chr7g0274581 48.333 120 61 1 15 134 12 130 1.03e-35 127
Msa1184180 MtrunA17_Chr1g0193801 41.667 168 86 2 7 163 4 170 1.14e-35 132
Msa1184180 MtrunA17_Chr3g0080861 49.533 107 53 1 15 121 37 142 1.17e-35 134
Msa1184180 MtrunA17_Chr6g0453211 48.760 121 61 1 11 131 8 127 2.46e-35 129
Msa1184180 MtrunA17_Chr1g0194301 46.154 117 62 1 9 125 27 142 5.95e-35 127
Msa1184180 MtrunA17_Chr4g0039971 50.926 108 52 1 11 118 9 115 1.06e-34 128
Msa1184180 MtrunA17_Chr2g0281071 51.376 109 51 2 15 122 13 120 1.53e-34 128
Msa1184180 MtrunA17_Chr2g0327821 50.407 123 60 1 12 134 3 124 1.54e-34 125
Msa1184180 MtrunA17_Chr7g0228231 47.368 114 59 1 15 128 14 126 2.44e-34 124
Msa1184180 MtrunA17_Chr1g0194291 44.915 118 64 1 8 125 14 130 2.72e-34 125
Msa1184180 MtrunA17_Chr4g0060721 49.565 115 55 2 15 129 13 124 3.13e-34 127
Msa1184180 MtrunA17_Chr1g0211161 50.893 112 54 1 7 118 5 115 3.85e-34 124
Msa1184180 MtrunA17_Chr5g0395281 49.541 109 54 1 10 118 7 114 3.99e-34 126
Msa1184180 MtrunA17_Chr2g0323411 49.107 112 55 2 11 121 8 118 4.05e-34 126
Msa1184180 MtrunA17_Chr6g0450101 47.107 121 61 3 3 122 3 121 5.74e-34 123
Msa1184180 MtrunA17_Chr8g0342541 44.928 138 73 2 7 142 4 140 6.48e-34 126
Msa1184180 MtrunA17_Chr2g0330041 48.092 131 64 3 7 134 4 133 6.77e-34 127
Msa1184180 MtrunA17_Chr1g0167661 39.560 182 97 6 15 187 12 189 7.58e-34 124
Msa1184180 MtrunA17_Chr2g0311221 50.000 118 58 1 11 128 10 126 8.75e-34 125
Msa1184180 MtrunA17_Chr5g0397231 50.926 108 52 1 7 114 4 110 1.09e-33 125
Msa1184180 MtrunA17_Chr8g0387421 48.696 115 58 1 7 121 4 117 1.10e-33 125
Msa1184180 MtrunA17_Chr3g0117091 52.336 107 50 1 12 118 9 114 1.58e-33 125
Msa1184180 MtrunA17_Chr1g0168661 49.565 115 57 1 7 121 13 126 1.62e-33 123
Msa1184180 MtrunA17_Chr1g0193371 50.435 115 56 1 7 121 4 117 1.75e-33 125
Msa1184180 MtrunA17_Chr2g0323351 41.722 151 85 2 11 161 8 155 2.22e-33 122
Msa1184180 MtrunA17_Chr2g0309911 50.000 112 55 1 7 118 3 113 2.31e-33 124
Msa1184180 MtrunA17_Chr3g0092401 48.673 113 56 2 15 126 13 124 4.07e-33 123
Msa1184180 MtrunA17_Chr7g0254411 48.760 121 57 3 15 131 12 131 4.91e-33 124
Msa1184180 MtrunA17_Chr7g0261281 41.667 132 76 1 15 146 12 142 5.26e-33 122
Msa1184180 MtrunA17_Chr4g0048511 49.541 109 53 2 15 122 13 120 5.82e-33 124
Msa1184180 MtrunA17_Chr3g0115821 48.148 108 55 1 11 118 8 114 7.24e-33 123
Msa1184180 MtrunA17_Chr8g0342521 45.802 131 68 2 7 135 4 133 7.67e-33 123
Msa1184180 MtrunA17_Chr1g0203441 51.327 113 53 2 16 127 14 125 8.10e-33 121
Msa1184180 MtrunA17_Chr6g0453471 43.066 137 75 2 11 147 8 141 8.56e-33 123
Msa1184180 MtrunA17_Chr1g0186061 50.000 108 53 1 11 118 16 122 1.14e-32 120
Msa1184180 MtrunA17_Chr4g0042671 35.885 209 105 6 15 196 12 218 1.85e-32 123
Msa1184180 MtrunA17_Chr8g0385321 50.000 108 53 1 11 118 8 114 2.95e-32 121
Msa1184180 MtrunA17_Chr2g0328771 49.138 116 56 2 15 130 20 132 3.50e-32 121
Msa1184180 MtrunA17_Chr1g0167691 41.985 131 74 2 11 140 8 137 3.67e-32 119
Msa1184180 MtrunA17_Chr1g0187761 46.218 119 61 2 15 133 12 127 3.74e-32 119
Msa1184180 MtrunA17_Chr4g0022881 41.727 139 79 2 11 149 8 144 4.27e-32 119
Msa1184180 MtrunA17_Chr7g0217741 47.706 109 55 2 15 122 12 119 4.35e-32 120
Msa1184180 MtrunA17_Chr3g0131121 42.000 150 75 3 11 149 8 156 5.68e-32 120
Msa1184180 MtrunA17_Chr8g0342481 50.877 114 52 3 7 118 4 115 6.74e-32 122
Msa1184180 MtrunA17_Chr8g0349261 54.286 105 46 2 15 118 13 116 8.80e-32 119
Msa1184180 MtrunA17_Chr1g0152011 37.129 202 112 6 11 209 8 197 1.48e-31 120
Msa1184180 MtrunA17_Chr1g0203411 48.598 107 54 1 15 121 12 117 1.52e-31 119
Msa1184180 MtrunA17_Chr1g0151941 48.624 109 54 2 11 118 8 115 3.21e-31 117
Msa1184180 MtrunA17_Chr7g0271241 51.402 107 51 1 7 113 4 109 3.74e-31 119
Msa1184180 MtrunA17_Chr2g0327351 44.366 142 73 3 11 151 8 144 3.74e-31 118
Msa1184180 MtrunA17_Chr4g0032401 47.287 129 64 4 8 133 9 136 4.09e-31 118
Msa1184180 MtrunA17_Chr4g0022931 50.943 106 50 2 15 119 13 117 4.22e-31 117
Msa1184180 MtrunA17_Chr4g0022901 43.284 134 74 2 15 147 13 145 5.10e-31 117
Msa1184180 MtrunA17_Chr5g0435101 48.148 108 55 1 11 118 7 113 5.57e-31 115
Msa1184180 MtrunA17_Chr4g0068921 45.378 119 64 1 6 124 15 132 5.85e-31 114
Msa1184180 MtrunA17_Chr4g0053431 42.581 155 87 2 17 171 5 157 6.90e-31 116
Msa1184180 MtrunA17_Chr3g0103281 48.148 108 55 1 11 118 8 114 1.14e-30 117
Msa1184180 MtrunA17_Chr4g0022891 40.397 151 89 1 11 161 8 157 1.17e-30 115
Msa1184180 MtrunA17_Chr4g0037141 47.222 108 56 1 11 118 8 114 1.34e-30 116
Msa1184180 MtrunA17_Chr4g0028311 48.624 109 54 2 11 118 8 115 2.16e-30 116
Msa1184180 MtrunA17_Chr2g0322521 54.206 107 48 1 15 121 29 134 2.51e-30 117
Msa1184180 MtrunA17_Chr4g0022911 46.341 123 64 2 15 136 13 134 3.46e-30 115
Msa1184180 MtrunA17_Chr6g0470971 52.427 103 48 1 16 118 15 116 6.35e-30 114
Msa1184180 MtrunA17_Chr8g0346561 46.154 117 61 2 15 130 12 127 6.69e-30 114
Msa1184180 MtrunA17_Chr6g0487491 40.506 158 78 5 11 153 8 164 7.27e-30 113
Msa1184180 MtrunA17_Chr5g0440781 47.706 109 55 2 15 122 12 119 8.35e-30 111
Msa1184180 MtrunA17_Chr5g0441131 49.524 105 51 2 15 118 9 112 9.29e-30 111
Msa1184180 MtrunA17_Chr4g0030881 51.724 116 46 4 12 118 4 118 9.82e-30 113
Msa1184180 MtrunA17_Chr3g0088461 50.962 104 50 1 15 118 22 124 1.17e-29 115
Msa1184180 MtrunA17_Chr5g0401731 51.818 110 50 3 9 118 8 114 1.34e-29 114
Msa1184180 MtrunA17_Chr5g0417821 46.789 109 56 2 15 122 7 114 1.40e-29 113
Msa1184180 MtrunA17_Chr5g0440761 47.706 109 55 2 15 122 12 119 2.12e-29 112
Msa1184180 MtrunA17_Chr3g0135311 39.506 162 94 3 11 171 8 166 2.27e-29 114
Msa1184180 MtrunA17_Chr5g0441141 47.706 109 55 2 15 122 12 119 2.43e-29 112
Msa1184180 MtrunA17_Chr2g0293911 44.538 119 65 1 6 124 15 132 4.73e-29 113
Msa1184180 MtrunA17_Chr4g0008551 51.961 102 47 2 17 118 38 137 5.09e-29 113
Msa1184180 MtrunA17_Chr3g0110351 48.148 108 55 1 11 118 8 114 5.61e-29 112
Msa1184180 MtrunA17_Chr4g0057031 49.074 108 54 1 11 118 8 114 7.11e-29 111
Msa1184180 MtrunA17_Chr5g0400821 47.706 109 55 2 11 118 8 115 8.52e-29 112
Msa1184180 MtrunA17_Chr4g0055981 45.631 103 55 1 12 114 52 153 9.34e-29 110
Msa1184180 MtrunA17_Chr3g0099141 51.111 90 43 1 11 100 36 124 9.64e-29 107
Msa1184180 MtrunA17_Chr5g0434571 48.148 108 55 1 11 118 44 150 9.73e-29 112
Msa1184180 MtrunA17_Chr6g0452271 46.018 113 59 2 11 122 8 119 1.19e-28 112
Msa1184180 MtrunA17_Chr7g0264641 47.706 109 55 2 11 118 8 115 1.43e-28 110
Msa1184180 MtrunA17_Chr4g0044421 49.020 102 51 1 17 118 14 114 1.70e-28 108
Msa1184180 MtrunA17_Chr1g0192411 46.296 108 57 1 15 122 12 118 1.95e-28 112
Msa1184180 MtrunA17_Chr4g0068061 31.466 232 122 7 15 240 12 212 4.79e-28 110
Msa1184180 MtrunA17_Chr4g0054391 48.077 104 52 2 11 113 8 110 6.19e-28 109
Msa1184180 MtrunA17_Chr7g0228891 45.133 113 61 1 11 123 8 119 7.15e-28 108
Msa1184180 MtrunA17_Chr3g0121241 46.000 100 53 1 15 114 42 140 8.88e-28 108
Msa1184180 MtrunA17_Chr4g0070641 35.583 163 94 4 12 166 9 168 9.29e-28 105
Msa1184180 MtrunA17_Chr4g0072751 48.571 105 52 2 11 114 8 111 1.10e-27 109
Msa1184180 MtrunA17_Chr3g0133601 50.000 104 50 2 17 120 37 138 1.37e-27 106
Msa1184180 MtrunA17_Chr4g0070611 29.412 221 150 4 12 230 9 225 2.12e-27 108
Msa1184180 MtrunA17_Chr6g0454921 50.000 108 51 3 6 113 5 109 2.65e-27 105
Msa1184180 MtrunA17_Chr7g0275911 44.000 100 55 1 15 114 12 110 4.22e-27 106
Msa1184180 MtrunA17_Chr1g0194951 45.192 104 56 1 15 118 12 114 1.14e-26 107
Msa1184180 MtrunA17_Chr7g0269831 44.030 134 69 3 15 148 12 139 5.97e-26 105
Msa1184180 MtrunA17_Chr8g0343831 44.000 100 55 1 15 114 8 106 2.29e-25 101
Msa1184180 MtrunA17_Chr7g0247131 51.429 105 41 3 47 143 11 113 2.56e-25 101
Msa1184180 MtrunA17_Chr7g0238631 35.780 218 120 5 17 219 113 325 3.45e-25 105
Msa1184180 MtrunA17_Chr1g0157731 49.020 102 50 2 17 118 91 190 4.81e-25 105
Msa1184180 MtrunA17_Chr1g0157731 33.628 113 70 4 3 112 23 133 2.85e-11 63.9
Msa1184180 MtrunA17_Chr8g0360111 46.939 98 51 1 15 112 25 121 5.76e-25 100
Msa1184180 MtrunA17_Chr5g0434931 45.045 111 58 2 15 123 35 144 7.66e-25 100
Msa1184180 MtrunA17_Chr4g0058991 45.217 115 61 2 4 118 196 308 8.18e-25 103
Msa1184180 MtrunA17_Chr7g0228531 42.623 122 63 3 1 118 200 318 8.84e-25 102
Msa1184180 MtrunA17_Chr3g0139671 48.039 102 51 2 17 118 85 184 1.23e-24 103
Msa1184180 MtrunA17_Chr3g0139671 31.304 115 74 4 1 112 15 127 7.46e-11 62.8
Msa1184180 MtrunA17_Chr5g0437321 51.020 98 46 2 17 114 19 114 2.66e-24 99.4
Msa1184180 MtrunA17_Chr6g0480581 47.619 105 53 2 17 121 4 106 3.85e-24 97.8
Msa1184180 MtrunA17_Chr7g0220341 39.597 149 74 5 15 157 25 163 7.13e-24 98.2
Msa1184180 MtrunA17_Chr5g0429661 44.545 110 59 2 9 118 114 221 7.54e-24 99.4
Msa1184180 MtrunA17_Chr7g0240821 45.833 96 51 1 19 114 5 99 2.09e-23 95.9
Msa1184180 MtrunA17_Chr7g0228991 46.000 100 53 1 15 114 29 127 2.31e-23 96.7
Msa1184180 MtrunA17_Chr5g0434911 44.037 109 58 2 15 121 21 128 2.98e-23 96.3
Msa1184180 MtrunA17_Chr3g0117511 46.078 102 53 2 17 118 183 282 5.05e-23 98.2
Msa1184180 MtrunA17_Chr5g0434831 43.269 104 58 1 15 118 7 109 7.25e-23 93.2
Msa1184180 MtrunA17_Chr5g0434841 42.609 115 64 2 4 118 10 122 1.09e-22 95.5
Msa1184180 MtrunA17_Chr5g0417621 47.619 105 53 2 17 121 134 236 1.20e-21 94.4
Msa1184180 MtrunA17_Chr7g0238651 43.363 113 61 2 20 130 10 121 1.94e-21 92.8
Msa1184180 MtrunA17_Chr4g0042501 48.958 96 47 2 17 112 105 198 2.66e-21 93.2
Msa1184180 MtrunA17_Chr7g0228481 40.833 120 67 3 14 133 217 332 5.29e-21 92.4
Msa1184180 MtrunA17_Chr3g0125801 47.619 105 53 2 8 112 7 109 2.35e-20 88.6
Msa1184180 MtrunA17_Chr5g0395221 48.718 78 39 1 15 92 12 88 3.40e-20 83.2
Msa1184180 MtrunA17_Chr5g0397841 47.423 97 49 2 17 113 110 204 3.72e-20 90.1
Msa1184180 MtrunA17_Chr8g0342461 47.727 88 44 2 7 93 4 90 3.97e-20 84.7
Msa1184180 MtrunA17_Chr4g0042611 43.902 82 45 1 11 92 8 88 4.10e-20 82.8
Msa1184180 MtrunA17_Chr6g0460661 35.461 141 77 3 17 157 16 142 1.00e-19 84.0
Msa1184180 MtrunA17_Chr8g0342471 46.591 88 45 2 7 93 4 90 1.67e-19 82.8
Msa1184180 MtrunA17_Chr2g0323321 40.404 99 58 1 11 109 7 104 3.55e-19 81.3
Msa1184180 MtrunA17_Chr8g0342511 44.706 85 46 1 7 91 4 87 3.67e-19 80.5
Msa1184180 MtrunA17_Chr8g0342531 40.426 94 55 1 5 98 2 94 7.52e-19 81.6
Msa1184180 MtrunA17_Chr7g0254261 45.714 105 55 2 17 121 89 191 9.30e-19 85.1
Msa1184180 MtrunA17_Chr6g0460671 40.179 112 65 2 17 128 99 208 1.76e-18 84.3
Msa1184180 MtrunA17_Chr7g0228401 44.565 92 49 2 28 119 290 379 8.28e-18 83.2
Msa1184180 MtrunA17_Chr7g0233061 39.286 112 64 3 17 128 180 287 9.73e-18 82.4
Msa1184180 MtrunA17_Chr5g0425591 44.048 84 45 2 15 97 9 91 6.06e-17 74.7
Msa1184180 MtrunA17_Chr8g0362231 38.235 102 61 2 20 121 25 124 1.69e-16 79.3
Msa1184180 MtrunA17_Chr5g0416341 32.653 147 92 4 9 152 20 162 5.29e-16 77.8
Msa1184180 MtrunA17_Chr6g0453751 40.000 100 50 3 7 97 12 110 5.70e-16 73.2
Msa1184180 MtrunA17_Chr5g0434901 48.000 75 34 2 40 114 2 71 8.94e-16 72.0
Msa1184180 MtrunA17_Chr3g0093811 48.571 70 35 1 49 118 16 84 2.31e-15 74.3
Msa1184180 MtrunA17_Chr7g0229101 47.826 69 35 1 49 117 6 73 7.81e-15 72.0
Msa1184180 MtrunA17_Chr1g0177901 41.935 93 52 2 27 119 4 94 1.02e-14 71.6
Msa1184180 MtrunA17_Chr2g0294811 36.364 99 60 2 15 111 12 109 2.64e-14 68.2
Msa1184180 MtrunA17_Chr7g0229131 32.800 125 70 3 49 173 6 116 3.90e-14 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1184180 AT3G60460.1 50.323 310 119 11 4 289 2 300 6.33e-84 254
Msa1184180 AT4G26930.1 56.075 107 46 1 15 121 19 124 2.90e-39 142
Msa1184180 AT5G55020.1 54.206 107 48 1 15 121 26 131 3.58e-37 138
Msa1184180 AT2G32460.1 54.206 107 48 1 15 121 18 123 1.03e-36 137
Msa1184180 AT2G32460.2 54.206 107 48 1 15 121 6 111 1.06e-36 136
Msa1184180 AT3G27810.1 38.710 155 93 2 15 169 20 172 1.35e-36 130
Msa1184180 AT5G06100.1 49.550 111 55 1 11 121 28 137 5.84e-36 134
Msa1184180 AT3G11440.2 51.402 107 51 1 15 121 41 146 6.13e-36 134
Msa1184180 AT2G26960.1 50.400 125 57 2 2 122 3 126 1.03e-35 133
Msa1184180 AT5G06100.5 49.550 111 55 1 11 121 28 137 1.70e-35 134
Msa1184180 AT5G06100.2 49.550 111 55 1 11 121 28 137 1.70e-35 134
Msa1184180 AT5G06100.3 49.550 111 55 1 11 121 28 137 1.70e-35 134
Msa1184180 AT5G06100.4 49.550 111 55 1 11 121 28 137 1.70e-35 134
Msa1184180 AT3G01140.2 46.212 132 68 2 11 142 8 136 2.25e-35 130
Msa1184180 AT3G11440.3 51.402 107 51 1 15 121 41 146 2.72e-35 134
Msa1184180 AT3G11440.4 51.402 107 51 1 15 121 41 146 2.72e-35 134
Msa1184180 AT3G11440.1 51.402 107 51 1 15 121 41 146 2.72e-35 134
Msa1184180 AT3G01140.1 46.212 132 68 2 11 142 51 179 3.59e-35 130
Msa1184180 AT3G47600.1 42.105 152 82 4 11 160 8 155 7.81e-35 129
Msa1184180 AT3G12720.1 47.445 137 69 2 1 135 8 143 8.44e-35 128
Msa1184180 AT4G01680.3 53.153 111 51 1 12 122 9 118 9.89e-35 126
Msa1184180 AT5G40350.1 47.899 119 59 2 15 133 17 132 2.30e-34 124
Msa1184180 AT1G08810.1 43.919 148 80 2 11 158 8 152 2.65e-34 126
Msa1184180 AT3G13890.2 50.893 112 54 1 7 118 4 114 2.91e-34 128
Msa1184180 AT4G01680.1 53.153 111 51 1 12 122 9 118 3.36e-34 127
Msa1184180 AT1G74650.1 45.968 124 66 1 15 138 12 134 4.16e-34 127
Msa1184180 AT1G25340.1 43.307 127 71 1 3 129 6 131 4.24e-34 125
Msa1184180 AT3G61250.1 52.212 113 51 2 11 123 8 117 5.26e-34 125
Msa1184180 AT4G28110.1 49.107 112 55 2 11 121 8 118 5.28e-34 125
Msa1184180 AT3G02940.2 47.788 113 57 2 11 122 8 119 9.40e-34 125
Msa1184180 AT3G01530.1 47.059 119 59 2 9 127 19 133 9.64e-34 122
Msa1184180 AT2G47190.1 48.649 111 56 1 15 125 20 129 1.14e-33 124
Msa1184180 AT3G02940.1 47.788 113 57 2 11 122 8 119 1.53e-33 125
Msa1184180 AT3G02940.3 47.788 113 57 2 11 122 8 119 1.53e-33 125
Msa1184180 AT1G79180.1 50.000 122 59 2 11 131 10 130 1.58e-33 124
Msa1184180 AT1G48000.1 46.847 111 58 1 15 125 32 141 1.64e-33 123
Msa1184180 AT5G65230.1 50.000 108 53 1 11 118 8 114 1.82e-33 124
Msa1184180 AT3G48920.1 53.982 113 51 1 10 122 13 124 1.95e-33 123
Msa1184180 AT2G16720.1 47.727 132 64 4 11 141 8 135 2.30e-33 123
Msa1184180 AT4G21440.1 49.541 109 53 2 15 122 12 119 3.07e-33 125
Msa1184180 AT5G26660.1 51.818 110 52 1 12 121 9 117 3.21e-33 125
Msa1184180 AT5G59780.3 50.420 119 58 1 12 130 5 122 3.56e-33 122
Msa1184180 AT5G62470.2 45.385 130 62 2 15 136 12 140 4.16e-33 124
Msa1184180 AT3G30210.1 52.885 104 48 1 15 118 27 129 4.19e-33 123
Msa1184180 AT1G09540.1 53.271 107 49 1 12 118 9 114 5.92e-33 124
Msa1184180 AT4G34990.1 45.038 131 69 2 11 141 8 135 6.10e-33 122
Msa1184180 AT5G15310.4 43.939 132 71 2 11 142 8 136 6.55e-33 121
Msa1184180 AT1G68320.1 44.444 117 64 1 13 129 17 132 6.95e-33 122
Msa1184180 AT5G15310.2 43.939 132 71 2 11 142 8 136 7.59e-33 123
Msa1184180 AT1G63910.1 48.696 115 58 1 7 121 4 117 8.83e-33 124
Msa1184180 AT5G15310.1 43.939 132 71 2 11 142 8 136 8.87e-33 123
Msa1184180 AT1G57560.2 48.333 120 59 2 5 124 2 118 9.80e-33 122
Msa1184180 AT3G28910.1 49.074 108 54 1 11 118 8 114 1.05e-32 123
Msa1184180 AT2G31180.1 46.552 116 60 2 15 129 12 126 1.14e-32 121
Msa1184180 AT1G57560.1 48.333 120 59 2 5 124 2 118 1.21e-32 122
Msa1184180 AT1G35515.1 43.827 162 79 7 11 163 8 166 1.23e-32 120
Msa1184180 AT5G54230.1 48.624 109 54 2 15 122 12 119 1.39e-32 122
Msa1184180 AT1G22640.1 50.000 108 53 1 11 118 8 114 1.46e-32 121
Msa1184180 AT5G16770.4 48.148 108 55 1 11 118 8 114 1.51e-32 122
Msa1184180 AT5G16770.3 48.148 108 55 1 11 118 8 114 1.51e-32 122
Msa1184180 AT5G16770.1 48.148 108 55 1 11 118 8 114 2.11e-32 122
Msa1184180 AT5G16770.2 48.148 108 55 1 11 118 8 114 2.11e-32 122
Msa1184180 AT4G37780.1 52.294 109 50 2 11 118 8 115 3.25e-32 121
Msa1184180 AT3G46130.1 51.818 110 52 1 12 121 6 114 3.61e-32 120
Msa1184180 AT4G13480.1 45.455 132 65 2 12 143 3 127 3.83e-32 120
Msa1184180 AT3G13890.1 47.107 121 54 2 7 118 4 123 8.73e-32 121
Msa1184180 AT3G24310.1 45.736 129 63 2 12 140 15 136 8.90e-32 119
Msa1184180 AT4G09460.1 44.371 151 74 6 11 155 8 154 9.84e-32 118
Msa1184180 AT4G05100.1 48.182 110 54 2 15 124 13 119 1.45e-31 120
Msa1184180 AT1G16490.1 50.450 111 53 2 11 120 10 119 1.45e-31 119
Msa1184180 AT1G25340.2 42.520 127 67 2 3 129 6 126 1.95e-31 118
Msa1184180 AT4G38620.1 41.447 152 82 3 11 156 8 158 2.22e-31 118
Msa1184180 AT5G62470.1 45.385 130 61 3 15 136 12 139 2.22e-31 120
Msa1184180 AT5G10280.1 47.222 108 56 1 11 118 8 114 3.79e-31 119
Msa1184180 AT3G12820.1 50.877 114 53 2 11 124 10 120 4.57e-31 116
Msa1184180 AT1G25340.3 42.520 127 67 2 3 129 6 126 5.19e-31 118
Msa1184180 AT4G01680.2 48.780 123 50 3 12 122 9 130 5.45e-31 119
Msa1184180 AT1G34670.1 47.222 108 56 1 11 118 8 114 6.97e-31 119
Msa1184180 AT1G56160.1 47.222 108 56 1 11 118 10 116 1.52e-30 116
Msa1184180 AT5G23000.1 48.624 109 54 2 11 118 8 115 2.07e-30 117
Msa1184180 AT5G56110.1 48.148 108 55 1 11 118 8 114 2.14e-30 117
Msa1184180 AT5G14750.1 46.491 114 60 1 1 114 2 114 2.43e-30 113
Msa1184180 AT3G50060.1 55.882 102 43 2 17 118 6 105 3.89e-30 115
Msa1184180 AT5G57620.1 49.541 109 53 2 11 118 8 115 4.28e-30 116
Msa1184180 AT5G07700.1 41.040 173 88 6 13 179 10 174 4.35e-30 116
Msa1184180 AT5G07700.2 41.040 173 88 6 13 179 10 174 4.35e-30 116
Msa1184180 AT1G74430.1 49.107 112 55 2 11 121 8 118 5.29e-30 114
Msa1184180 AT5G07690.1 47.664 107 55 1 13 119 10 115 7.56e-30 115
Msa1184180 AT3G53200.1 49.541 109 54 1 10 118 4 111 1.08e-29 113
Msa1184180 AT3G23250.1 40.127 157 89 3 15 170 12 164 1.20e-29 114
Msa1184180 AT1G18570.1 47.826 115 57 2 10 124 8 119 1.43e-29 115
Msa1184180 AT3G27920.1 43.182 132 72 3 2 132 2 131 1.83e-29 112
Msa1184180 AT3G06490.1 45.161 124 67 1 2 125 6 128 2.42e-29 114
Msa1184180 AT4G22680.1 49.123 114 55 2 11 124 8 118 2.50e-29 112
Msa1184180 AT5G61420.2 47.321 112 56 2 13 124 10 118 4.46e-29 114
Msa1184180 AT5G12870.1 47.321 112 57 2 15 125 18 128 4.59e-29 112
Msa1184180 AT1G06180.1 46.154 104 55 1 15 118 12 114 4.66e-29 111
Msa1184180 AT4G25560.1 46.721 122 62 2 6 127 1 119 4.78e-29 112
Msa1184180 AT3G55730.1 50.000 126 56 4 17 137 56 179 4.99e-29 114
Msa1184180 AT4G17785.2 47.115 104 54 1 15 118 13 115 5.46e-29 113
Msa1184180 AT1G66230.1 47.748 111 57 1 11 121 8 117 5.82e-29 112
Msa1184180 AT3G13540.1 46.296 108 56 2 15 121 23 129 6.02e-29 111
Msa1184180 AT4G17785.1 47.115 104 54 1 15 118 13 115 6.50e-29 113
Msa1184180 AT3G49690.1 48.624 109 54 2 11 118 8 115 7.45e-29 112
Msa1184180 AT3G28470.1 50.000 104 51 1 11 114 8 110 7.56e-29 112
Msa1184180 AT5G49620.1 48.649 111 56 1 15 125 26 135 8.22e-29 112
Msa1184180 AT5G40330.1 48.077 104 52 2 12 114 8 110 1.08e-28 109
Msa1184180 AT3G08500.1 46.847 111 58 1 8 118 23 132 1.80e-28 112
Msa1184180 AT5G67300.1 54.902 102 44 2 17 118 6 105 1.87e-28 111
Msa1184180 AT1G79180.2 41.781 146 48 4 11 121 10 153 2.12e-28 111
Msa1184180 AT2G23290.1 51.754 114 52 3 6 118 1 112 2.21e-28 111
Msa1184180 AT5G65790.1 47.706 109 55 2 11 118 8 115 2.34e-28 112
Msa1184180 AT5G14340.1 37.736 159 92 3 11 167 20 173 2.89e-28 110
Msa1184180 AT5G62320.1 47.154 123 54 3 6 118 1 122 3.09e-28 109
Msa1184180 AT5G49330.1 47.115 104 54 1 15 118 12 114 3.12e-28 111
Msa1184180 AT4G12350.1 47.368 114 57 2 11 124 8 118 3.39e-28 110
Msa1184180 AT5G60890.1 45.794 107 57 1 12 118 9 114 3.50e-28 110
Msa1184180 AT2G47460.1 46.154 104 55 1 15 118 12 114 4.39e-28 111
Msa1184180 AT2G36890.1 44.068 118 62 3 11 127 8 122 5.96e-28 109
Msa1184180 AT5G52600.1 44.340 106 58 1 9 114 6 110 6.74e-28 107
Msa1184180 AT1G18710.1 46.429 112 58 2 11 121 8 118 7.38e-28 108
Msa1184180 AT5G16600.1 47.748 111 57 1 11 121 8 117 7.83e-28 110
Msa1184180 AT5G52260.1 47.458 118 59 2 8 125 5 119 1.05e-27 108
Msa1184180 AT2G39880.1 52.941 102 46 2 17 118 50 149 1.18e-27 110
Msa1184180 AT2G36890.2 45.872 109 57 2 11 118 49 156 1.20e-27 109
Msa1184180 AT4G37260.1 50.000 110 52 3 9 118 6 112 1.66e-27 108
Msa1184180 AT2G26950.1 47.573 103 53 1 17 119 18 119 1.76e-26 107
Msa1184180 AT3G09230.1 49.550 111 51 3 8 118 49 154 1.79e-26 107
Msa1184180 AT3G62610.1 45.192 104 56 1 15 118 12 114 2.11e-26 106
Msa1184180 AT1G74080.1 44.860 107 58 1 13 119 10 115 2.53e-26 106
Msa1184180 AT5G35550.1 42.241 116 64 2 12 127 11 123 2.71e-26 104
Msa1184180 AT4G18770.1 50.000 102 49 2 17 118 217 316 7.43e-26 106
Msa1184180 AT3G27810.2 38.843 121 72 2 49 169 5 123 1.00e-25 100
Msa1184180 AT5G02320.1 49.107 112 54 3 17 127 127 236 1.21e-25 106
Msa1184180 AT5G02320.2 49.107 112 54 3 17 127 127 236 1.21e-25 106
Msa1184180 AT5G02320.3 49.107 112 54 3 17 127 67 176 1.38e-25 106
Msa1184180 AT1G69560.2 33.184 223 139 4 8 225 114 331 1.58e-25 104
Msa1184180 AT1G69560.1 33.184 223 139 4 8 225 98 315 1.76e-25 103
Msa1184180 AT5G49620.2 43.200 125 56 2 15 125 26 149 2.85e-25 103
Msa1184180 AT1G66370.1 34.483 174 97 4 15 188 8 164 3.69e-25 101
Msa1184180 AT5G40360.1 46.903 113 56 3 7 119 150 258 1.66e-24 101
Msa1184180 AT4G32730.1 40.000 155 77 4 17 165 87 231 1.80e-24 103
Msa1184180 AT4G32730.1 36.082 97 59 3 17 112 35 129 2.82e-11 64.3
Msa1184180 AT4G32730.5 40.000 155 77 4 17 165 87 231 1.81e-24 103
Msa1184180 AT4G32730.5 36.082 97 59 3 17 112 35 129 2.66e-11 64.7
Msa1184180 AT4G32730.4 40.000 155 77 4 17 165 87 231 1.81e-24 103
Msa1184180 AT4G32730.4 36.082 97 59 3 17 112 35 129 2.66e-11 64.7
Msa1184180 AT4G32730.3 40.000 155 77 4 17 165 87 231 1.81e-24 103
Msa1184180 AT4G32730.3 36.082 97 59 3 17 112 35 129 2.66e-11 64.7
Msa1184180 AT4G32730.2 40.000 155 77 4 17 165 87 231 1.81e-24 103
Msa1184180 AT4G32730.2 36.082 97 59 3 17 112 35 129 2.66e-11 64.7
Msa1184180 AT5G11510.3 46.078 102 53 2 17 118 81 180 3.54e-24 102
Msa1184180 AT5G11510.3 35.052 97 60 3 17 112 29 123 3.40e-11 64.3
Msa1184180 AT5G11510.1 46.078 102 53 2 17 118 81 180 3.54e-24 102
Msa1184180 AT5G11510.1 35.052 97 60 3 17 112 29 123 3.40e-11 64.3
Msa1184180 AT5G11510.4 46.078 102 53 2 17 118 81 180 3.54e-24 102
Msa1184180 AT5G11510.4 35.052 97 60 3 17 112 29 123 3.40e-11 64.3
Msa1184180 AT5G11510.2 46.078 102 53 2 17 118 81 180 4.34e-24 102
Msa1184180 AT5G11510.2 35.052 97 60 3 17 112 29 123 3.21e-11 64.3
Msa1184180 AT5G58850.1 43.636 110 60 2 9 118 97 204 4.50e-24 101
Msa1184180 AT5G11510.5 46.078 102 53 2 17 118 81 180 4.63e-24 102
Msa1184180 AT5G11510.5 35.052 97 60 3 17 112 29 123 3.51e-11 64.3
Msa1184180 AT3G09370.2 50.000 102 49 2 17 118 135 234 5.35e-24 101
Msa1184180 AT3G09370.1 50.000 102 49 2 17 118 130 229 6.05e-24 101
Msa1184180 AT3G09370.3 50.000 102 49 2 17 118 143 242 8.13e-24 101
Msa1184180 AT3G46130.3 58.904 73 29 1 49 121 11 82 1.27e-23 96.7
Msa1184180 AT5G26660.2 58.904 73 29 1 49 121 15 86 1.69e-23 98.2
Msa1184180 AT5G59780.2 56.098 82 35 1 49 130 21 101 2.06e-23 95.9
Msa1184180 AT3G46130.4 58.904 73 29 1 49 121 21 92 2.32e-23 96.3
Msa1184180 AT5G40350.2 51.765 85 38 2 49 133 6 87 2.45e-23 94.4
Msa1184180 AT1G66380.1 46.000 100 53 1 15 114 8 106 4.06e-23 92.8
Msa1184180 AT3G47600.2 43.860 114 58 4 49 160 40 149 8.03e-23 96.7
Msa1184180 AT1G56650.1 46.000 100 53 1 15 114 8 106 1.22e-22 94.4
Msa1184180 AT3G12820.2 59.459 74 27 2 51 124 2 72 2.13e-22 92.4
Msa1184180 AT3G29020.1 43.363 113 59 3 17 129 65 172 2.22e-22 93.6
Msa1184180 AT3G29020.2 43.363 113 59 3 17 129 67 174 2.31e-22 94.7
Msa1184180 AT3G27785.1 45.192 104 55 2 15 118 187 288 2.57e-22 96.3
Msa1184180 AT5G11050.1 42.857 105 58 2 14 118 102 204 5.51e-22 95.5
Msa1184180 AT5G17800.1 43.697 119 63 3 5 121 79 195 7.30e-22 94.0
Msa1184180 AT1G26780.1 47.619 105 53 2 17 121 98 200 8.43e-22 92.8
Msa1184180 AT1G17950.1 45.714 105 55 2 17 121 5 107 9.18e-22 92.0
Msa1184180 AT1G26780.2 47.619 105 53 2 17 121 98 200 1.14e-21 94.0
Msa1184180 AT4G33450.1 41.880 117 66 2 15 131 17 131 4.46e-21 90.1
Msa1184180 AT1G66390.1 44.000 100 55 1 15 114 8 106 5.20e-21 90.1
Msa1184180 AT4G00540.2 50.459 109 48 4 15 119 101 207 6.99e-21 92.0
Msa1184180 AT4G00540.1 50.459 109 48 4 15 119 99 205 1.51e-20 91.3
Msa1184180 AT3G53200.2 55.714 70 30 1 49 118 10 78 2.09e-20 87.4
Msa1184180 AT1G73410.1 46.667 105 54 2 17 121 6 108 5.53e-20 87.0
Msa1184180 AT1G73410.2 46.667 105 54 2 17 121 6 108 7.83e-20 85.9
Msa1184180 AT2G37630.1 46.316 95 48 2 20 112 7 100 9.63e-20 88.6
Msa1184180 AT5G14750.3 56.250 64 27 1 51 114 18 80 4.99e-19 82.8
Msa1184180 AT2G25230.1 40.404 99 56 3 22 119 30 126 7.41e-19 84.0
Msa1184180 AT5G39700.1 41.525 118 67 2 4 121 43 158 9.22e-19 82.4
Msa1184180 AT5G35550.2 50.633 79 36 2 49 127 51 126 1.73e-18 83.6
Msa1184180 AT5G40430.1 37.143 105 63 3 15 119 52 153 3.68e-15 73.9
Msa1184180 AT1G14350.2 34.646 127 76 4 9 132 19 141 4.25e-15 75.5
Msa1184180 AT1G14350.1 34.646 127 76 4 9 132 19 141 4.25e-15 75.5
Msa1184180 AT1G66380.3 51.515 66 31 1 49 114 9 73 1.13e-14 69.3
Msa1184180 AT2G02820.2 35.398 113 69 3 9 121 24 132 1.99e-14 73.6
Msa1184180 AT2G02820.1 35.398 113 69 3 9 121 24 132 2.81e-14 73.2
Msa1184180 AT2G02820.3 35.088 114 70 3 8 121 23 132 3.58e-14 72.0
Msa1184180 AT1G22640.3 45.679 81 41 2 61 141 1 78 7.82e-14 69.3
Msa1184180 AT3G23250.2 39.640 111 62 3 61 170 1 107 1.09e-12 66.6
Msa1184180 AT1G66380.2 35.714 98 61 2 15 111 8 104 4.24e-12 62.4
Msa1184180 AT5G59780.1 47.368 57 30 0 74 130 1 57 2.45e-11 61.6
Msa1184180 AT1G18960.1 34.286 105 59 3 17 118 10 107 2.60e-11 63.5
Msa1184180 AT3G18100.1 37.500 104 63 2 9 112 538 639 2.72e-11 64.7
Msa1184180 AT5G14750.4 50.000 54 26 1 61 114 1 53 3.04e-11 60.8
Msa1184180 AT5G14750.2 50.000 54 26 1 61 114 1 53 3.04e-11 60.8
Msa1184180 AT3G46130.2 50.000 48 24 0 74 121 1 48 3.17e-11 61.6
Msa1184180 AT3G18100.3 37.500 104 63 2 9 112 490 591 3.85e-11 63.9
Msa1184180 AT3G18100.4 37.500 104 63 2 9 112 377 478 4.20e-11 63.9
Msa1184180 AT3G18100.2 37.500 104 63 2 9 112 325 426 4.67e-11 63.5
Msa1184180 AT1G71030.2 43.077 65 36 1 54 118 5 68 5.96e-11 60.8
Msa1184180 AT1G71030.1 43.077 65 36 1 54 118 19 82 7.18e-11 60.8

Find 58 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTGTTCTTCCTGGTAAAT+AGG 0.261776 8_1:-19777110 None:intergenic
GTAAAATCAGTTTCGAGTTC+TGG 0.265895 8_1:-19777723 None:intergenic
ACAATGATGTCAAGAATTTC+TGG 0.266147 8_1:+19777131 Msa1184180:CDS
ATAGAATTGCAGGAACAATT+TGG 0.279339 8_1:+19777064 Msa1184180:CDS
GATGAGGAACTGAACTTATA+AGG 0.293723 8_1:-19777501 None:intergenic
ACATCATTGTCTGTTCTTCC+TGG 0.301376 8_1:-19777118 None:intergenic
TTCCGATCAAGTTATCAAAA+TGG 0.309350 8_1:+19777578 Msa1184180:CDS
GAGGATTGTGATAGAATTGC+AGG 0.342837 8_1:+19777054 Msa1184180:CDS
GCAAGTCTTGTCGTCTTCGT+TGG 0.346401 8_1:+19776254 Msa1184180:CDS
TCAATGCATGGTAATGAATA+TGG 0.359559 8_1:-19777552 None:intergenic
CCCTTGGAAACATCTGAGTT+TGG 0.377212 8_1:+19777795 Msa1184180:CDS
CAAAATTTATTTGATGTGTT+TGG 0.378842 8_1:+19777771 Msa1184180:CDS
CTTCATAATTCAGAGCTTAG+AGG 0.387043 8_1:-19777919 None:intergenic
AGGAACAATTTGGAAACAAA+TGG 0.388989 8_1:+19777074 Msa1184180:CDS
AGTTCTTTGAAGAAGACCTT+TGG 0.401175 8_1:-19776230 None:intergenic
ATTTGATGTGTTTGGTCCCT+TGG 0.403712 8_1:+19777779 Msa1184180:CDS
CAAGTCTTGTCGTCTTCGTT+GGG 0.415472 8_1:+19776255 Msa1184180:CDS
CGAATGGAGCTCCAATCTCT+TGG 0.416244 8_1:-19776205 None:intergenic
CTTTGATAGCTCTGATCAAA+AGG 0.418845 8_1:-19777672 None:intergenic
AAAGGTCTTCTTCAAAGAAC+TGG 0.425042 8_1:+19776232 Msa1184180:CDS
CTTCATCATGTGAAGAAGTA+TGG 0.445060 8_1:+19776181 Msa1184180:CDS
ACGTAAATCGCATCGAAACT+AGG 0.450444 8_1:-19777633 None:intergenic
AGAAGTATGGTCCAAGAGAT+TGG 0.451426 8_1:+19776194 Msa1184180:CDS
TATCAAAATGGTTCCACTGT+TGG 0.461276 8_1:+19777590 Msa1184180:CDS
ATGTGATCAAACATGTCCTC+TGG 0.462287 8_1:-19777879 None:intergenic
TGTTCATCAACTCTTTCCAT+TGG 0.465631 8_1:-19777750 None:intergenic
AAGAAGACCTTTGGATCGAA+TGG 0.469841 8_1:-19776221 None:intergenic
GTAGACAAAAGAGGCTGGCT+AGG 0.474004 8_1:+19777158 Msa1184180:CDS
TGGTAAATAGGATGCAATCT+TGG 0.487125 8_1:-19777098 None:intergenic
TGGAACACGGGAAGAAACTT+TGG 0.494230 8_1:-19777230 None:intergenic
CGCATCGAAACTAGGTTGCT+CGG 0.505191 8_1:-19777625 None:intergenic
GGAACAATTTGGAAACAAAT+GGG 0.516278 8_1:+19777075 Msa1184180:CDS
AGAAAGATCAAGAGCACGTA+AGG 0.526200 8_1:+19776122 Msa1184180:CDS
CATGGTAATGAATATGGTTG+AGG 0.536436 8_1:-19777546 None:intergenic
GGAAACATCTGAGTTTGGAA+TGG 0.540896 8_1:+19777800 Msa1184180:CDS
TTTGATAGCTCTGATCAAAA+GGG 0.542008 8_1:-19777671 None:intergenic
CTGAGGAAATGCAATGTGTT+CGG 0.543961 8_1:-19777697 None:intergenic
AAGATTGCATCCTATTTACC+AGG 0.556707 8_1:+19777100 Msa1184180:CDS
TTCATAATTCAGAGCTTAGA+GGG 0.556748 8_1:-19777918 None:intergenic
TCCAAACTCAGATGTTTCCA+AGG 0.561882 8_1:-19777796 None:intergenic
TAAGTTCAGTTCCTCATCAG+AGG 0.567214 8_1:+19777506 Msa1184180:CDS
AGCACGTAAGGAAAGGTCCA+TGG 0.568999 8_1:+19776134 Msa1184180:CDS
TGGAGCTCCATTCGATCCAA+AGG 0.580870 8_1:+19776214 Msa1184180:CDS
GAGCAGTAGACAAAAGAGGC+TGG 0.580963 8_1:+19777153 Msa1184180:CDS
AAGTTCAGTTCCTCATCAGA+GGG 0.590582 8_1:+19777507 Msa1184180:CDS
TGATCGGAATTCTCAATGCA+TGG 0.593071 8_1:-19777564 None:intergenic
GTTTCGAGTTCTGGAATCTG+AGG 0.593864 8_1:-19777714 None:intergenic
AGTTTACAATCGAGGAAGAG+AGG 0.597675 8_1:+19777035 Msa1184180:CDS
GATCAAGAGCACGTAAGGAA+AGG 0.598487 8_1:+19776127 Msa1184180:CDS
TGATGCTTCTCCCTCTGATG+AGG 0.607465 8_1:-19777517 None:intergenic
AGCTTAGAGGGATTTGAATG+TGG 0.609877 8_1:-19777906 None:intergenic
TTCCCGTGTTCCATCTCACG+AGG 0.618226 8_1:+19777240 Msa1184180:CDS
TCTGGAGCAGTAGACAAAAG+AGG 0.622092 8_1:+19777149 Msa1184180:CDS
CCAAACTCAGATGTTTCCAA+GGG 0.635161 8_1:-19777795 None:intergenic
TTACCTCGTGAGATGGAACA+CGG 0.643501 8_1:-19777243 None:intergenic
TTGATAGCTCTGATCAAAAG+GGG 0.650518 8_1:-19777670 None:intergenic
TGGGTGCAAGTTTACAATCG+AGG 0.667952 8_1:+19777027 Msa1184180:CDS
TACCTCGTGAGATGGAACAC+GGG 0.696461 8_1:-19777242 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAAATTAATTATTTGAT+GGG + chr8_1:19776948-19776967 Msa1184180:intron 10.0%
!!! AATTCTTATATTTTTATTGA+AGG + chr8_1:19777476-19777495 Msa1184180:intron 10.0%
!! ATTCAAATTAATTATTTGAT+GGG + chr8_1:19776948-19776967 Msa1184180:intron 10.0%
!!! AATTCTTATATTTTTATTGA+AGG + chr8_1:19777476-19777495 Msa1184180:intron 10.0%
!! TTAAAATTATAAACAATCGA+TGG - chr8_1:19776706-19776725 None:intergenic 15.0%
!!! CATCAAATAATTAATTTGAA+TGG - chr8_1:19776949-19776968 None:intergenic 15.0%
!! CATTCAAATTAATTATTTGA+TGG + chr8_1:19776947-19776966 Msa1184180:intron 15.0%
!!! TTAAATATTGAGTTTGAAAT+CGG - chr8_1:19777362-19777381 None:intergenic 15.0%
!!! TATAAGAATTTTAGAGAAAA+CGG - chr8_1:19777466-19777485 None:intergenic 15.0%
!! TTAAAATTATAAACAATCGA+TGG - chr8_1:19776706-19776725 None:intergenic 15.0%
!!! CATCAAATAATTAATTTGAA+TGG - chr8_1:19776949-19776968 None:intergenic 15.0%
!! CATTCAAATTAATTATTTGA+TGG + chr8_1:19776947-19776966 Msa1184180:intron 15.0%
!!! TTAAATATTGAGTTTGAAAT+CGG - chr8_1:19777362-19777381 None:intergenic 15.0%
!!! TATAAGAATTTTAGAGAAAA+CGG - chr8_1:19777466-19777485 None:intergenic 15.0%
!!! TAAGAATAACATACTTTTTG+AGG - chr8_1:19776300-19776319 None:intergenic 20.0%
!! TTGGAAAATATAATTCGTTT+CGG + chr8_1:19776498-19776517 Msa1184180:intron 20.0%
!! TTTATGAAAATTTACAACCA+TGG + chr8_1:19776527-19776546 Msa1184180:intron 20.0%
!! TTATGAAAATTTACAACCAT+GGG + chr8_1:19776528-19776547 Msa1184180:intron 20.0%
!! TAAATATGAAATTTCCTTCA+TGG + chr8_1:19776591-19776610 Msa1184180:intron 20.0%
!! AAATATGAAATTTCCTTCAT+GGG + chr8_1:19776592-19776611 Msa1184180:intron 20.0%
!!! TTATTTGATTTTTGTGTTTC+TGG + chr8_1:19776990-19777009 Msa1184180:intron 20.0%
!! CAAAATTTATTTGATGTGTT+TGG + chr8_1:19777771-19777790 Msa1184180:CDS 20.0%
!!! TAAGAATAACATACTTTTTG+AGG - chr8_1:19776300-19776319 None:intergenic 20.0%
!! TTGGAAAATATAATTCGTTT+CGG + chr8_1:19776498-19776517 Msa1184180:intron 20.0%
!! TTTATGAAAATTTACAACCA+TGG + chr8_1:19776527-19776546 Msa1184180:intron 20.0%
!! TTATGAAAATTTACAACCAT+GGG + chr8_1:19776528-19776547 Msa1184180:intron 20.0%
!! TAAATATGAAATTTCCTTCA+TGG + chr8_1:19776591-19776610 Msa1184180:intron 20.0%
!! AAATATGAAATTTCCTTCAT+GGG + chr8_1:19776592-19776611 Msa1184180:intron 20.0%
!!! TTATTTGATTTTTGTGTTTC+TGG + chr8_1:19776990-19777009 Msa1184180:intron 20.0%
!! CAAAATTTATTTGATGTGTT+TGG + chr8_1:19777771-19777790 Msa1184180:CDS 20.0%
! AGAAGAAAAAGAAAAATGCA+TGG + chr8_1:19776097-19776116 Msa1184180:CDS 25.0%
! GAAGAAAAAGAAAAATGCAT+GGG + chr8_1:19776098-19776117 Msa1184180:CDS 25.0%
!!! ATAACATACTTTTTGAGGTT+TGG - chr8_1:19776295-19776314 None:intergenic 25.0%
! TATGAAAATTTACAACCATG+GGG + chr8_1:19776529-19776548 Msa1184180:intron 25.0%
! TAACACACTTACATAATACA+CGG + chr8_1:19776723-19776742 Msa1184180:intron 25.0%
! ACTGATAATAACATGAGAAA+CGG - chr8_1:19776791-19776810 None:intergenic 25.0%
!!! AGTTGTTTTAAGTGTATGTT+TGG + chr8_1:19776908-19776927 Msa1184180:intron 25.0%
! GAGGTAATTAAAAAACACAA+AGG + chr8_1:19777259-19777278 Msa1184180:intron 25.0%
!!! TCTTGTCCTTTCTTTTAATT+CGG + chr8_1:19777292-19777311 Msa1184180:intron 25.0%
! AATATATGATCCTGATCTAA+TGG + chr8_1:19777395-19777414 Msa1184180:intron 25.0%
!!! AACCATTTTGATAACTTGAT+CGG - chr8_1:19777583-19777602 None:intergenic 25.0%
! AGAAGAAAAAGAAAAATGCA+TGG + chr8_1:19776097-19776116 Msa1184180:CDS 25.0%
! GAAGAAAAAGAAAAATGCAT+GGG + chr8_1:19776098-19776117 Msa1184180:CDS 25.0%
!!! ATAACATACTTTTTGAGGTT+TGG - chr8_1:19776295-19776314 None:intergenic 25.0%
! TATGAAAATTTACAACCATG+GGG + chr8_1:19776529-19776548 Msa1184180:intron 25.0%
! TAACACACTTACATAATACA+CGG + chr8_1:19776723-19776742 Msa1184180:intron 25.0%
! ACTGATAATAACATGAGAAA+CGG - chr8_1:19776791-19776810 None:intergenic 25.0%
!!! AGTTGTTTTAAGTGTATGTT+TGG + chr8_1:19776908-19776927 Msa1184180:intron 25.0%
! GAGGTAATTAAAAAACACAA+AGG + chr8_1:19777259-19777278 Msa1184180:intron 25.0%
!!! TCTTGTCCTTTCTTTTAATT+CGG + chr8_1:19777292-19777311 Msa1184180:intron 25.0%
! AATATATGATCCTGATCTAA+TGG + chr8_1:19777395-19777414 Msa1184180:intron 25.0%
!!! AACCATTTTGATAACTTGAT+CGG - chr8_1:19777583-19777602 None:intergenic 25.0%
TGTCAGACATATCAATGTTT+CGG - chr8_1:19776403-19776422 None:intergenic 30.0%
!! AATGTTTTTGCTTCATTGCT+TGG + chr8_1:19776479-19776498 Msa1184180:intron 30.0%
TCACTAATCACTTGTAGTAA+AGG - chr8_1:19776637-19776656 None:intergenic 30.0%
ATAAACAATCGATGGAGAAT+AGG - chr8_1:19776698-19776717 None:intergenic 30.0%
! TTTTCGTGATGATACAAAGA+TGG + chr8_1:19776871-19776890 Msa1184180:intron 30.0%
GATACAAAGATGGAGTAAAT+TGG + chr8_1:19776881-19776900 Msa1184180:intron 30.0%
!!! TTTGATGGGTTTTCATTGAT+TGG + chr8_1:19776962-19776981 Msa1184180:intron 30.0%
ATAGAATTGCAGGAACAATT+TGG + chr8_1:19777064-19777083 Msa1184180:CDS 30.0%
AGGAACAATTTGGAAACAAA+TGG + chr8_1:19777074-19777093 Msa1184180:CDS 30.0%
GGAACAATTTGGAAACAAAT+GGG + chr8_1:19777075-19777094 Msa1184180:CDS 30.0%
ACAATGATGTCAAGAATTTC+TGG + chr8_1:19777131-19777150 Msa1184180:CDS 30.0%
!!! TTTGTTTTTGTGTGACTTTG+AGG - chr8_1:19777209-19777228 None:intergenic 30.0%
!! TTTTTAATTACCTCGTGAGA+TGG - chr8_1:19777253-19777272 None:intergenic 30.0%
!! CTTGTCCTTTCTTTTAATTC+GGG + chr8_1:19777293-19777312 Msa1184180:intron 30.0%
AGTAGTCATTGGATCAAAAT+TGG + chr8_1:19777330-19777349 Msa1184180:intron 30.0%
! TCAATGCATGGTAATGAATA+TGG - chr8_1:19777555-19777574 None:intergenic 30.0%
TTCCGATCAAGTTATCAAAA+TGG + chr8_1:19777578-19777597 Msa1184180:CDS 30.0%
!!! GATTTTTTAAGATCCAACAG+TGG - chr8_1:19777606-19777625 None:intergenic 30.0%
!! TTTGATAGCTCTGATCAAAA+GGG - chr8_1:19777674-19777693 None:intergenic 30.0%
!! AACTGATTTTACGTTTCCAA+TGG + chr8_1:19777734-19777753 Msa1184180:CDS 30.0%
!! TTTCTTTGATGATTTTCCAG+AGG + chr8_1:19777863-19777882 Msa1184180:CDS 30.0%
TGTCAGACATATCAATGTTT+CGG - chr8_1:19776403-19776422 None:intergenic 30.0%
!! AATGTTTTTGCTTCATTGCT+TGG + chr8_1:19776479-19776498 Msa1184180:intron 30.0%
TCACTAATCACTTGTAGTAA+AGG - chr8_1:19776637-19776656 None:intergenic 30.0%
ATAAACAATCGATGGAGAAT+AGG - chr8_1:19776698-19776717 None:intergenic 30.0%
! TTTTCGTGATGATACAAAGA+TGG + chr8_1:19776871-19776890 Msa1184180:intron 30.0%
GATACAAAGATGGAGTAAAT+TGG + chr8_1:19776881-19776900 Msa1184180:intron 30.0%
!!! TTTGATGGGTTTTCATTGAT+TGG + chr8_1:19776962-19776981 Msa1184180:intron 30.0%
ATAGAATTGCAGGAACAATT+TGG + chr8_1:19777064-19777083 Msa1184180:CDS 30.0%
AGGAACAATTTGGAAACAAA+TGG + chr8_1:19777074-19777093 Msa1184180:CDS 30.0%
GGAACAATTTGGAAACAAAT+GGG + chr8_1:19777075-19777094 Msa1184180:CDS 30.0%
ACAATGATGTCAAGAATTTC+TGG + chr8_1:19777131-19777150 Msa1184180:CDS 30.0%
!!! TTTGTTTTTGTGTGACTTTG+AGG - chr8_1:19777209-19777228 None:intergenic 30.0%
!! TTTTTAATTACCTCGTGAGA+TGG - chr8_1:19777253-19777272 None:intergenic 30.0%
!! CTTGTCCTTTCTTTTAATTC+GGG + chr8_1:19777293-19777312 Msa1184180:intron 30.0%
AGTAGTCATTGGATCAAAAT+TGG + chr8_1:19777330-19777349 Msa1184180:intron 30.0%
! TCAATGCATGGTAATGAATA+TGG - chr8_1:19777555-19777574 None:intergenic 30.0%
TTCCGATCAAGTTATCAAAA+TGG + chr8_1:19777578-19777597 Msa1184180:CDS 30.0%
!!! GATTTTTTAAGATCCAACAG+TGG - chr8_1:19777606-19777625 None:intergenic 30.0%
!! TTTGATAGCTCTGATCAAAA+GGG - chr8_1:19777674-19777693 None:intergenic 30.0%
!! AACTGATTTTACGTTTCCAA+TGG + chr8_1:19777734-19777753 Msa1184180:CDS 30.0%
!! TTTCTTTGATGATTTTCCAG+AGG + chr8_1:19777863-19777882 Msa1184180:CDS 30.0%
! TCATCTTCTTCTGTTTTCCA+TGG - chr8_1:19776154-19776173 None:intergenic 35.0%
CTTCATCATGTGAAGAAGTA+TGG + chr8_1:19776181-19776200 Msa1184180:CDS 35.0%
! AGTTCTTTGAAGAAGACCTT+TGG - chr8_1:19776233-19776252 None:intergenic 35.0%
AAAGGTCTTCTTCAAAGAAC+TGG + chr8_1:19776232-19776251 Msa1184180:CDS 35.0%
AAAAATGAGACAACCCATGA+AGG - chr8_1:19776608-19776627 None:intergenic 35.0%
!! CATGGGTTGTCTCATTTTTA+TGG + chr8_1:19776609-19776628 Msa1184180:intron 35.0%
AACGGAATAAATGAATGCGT+TGG - chr8_1:19776773-19776792 None:intergenic 35.0%
TGGTAAATAGGATGCAATCT+TGG - chr8_1:19777101-19777120 None:intergenic 35.0%
AAGATTGCATCCTATTTACC+AGG + chr8_1:19777100-19777119 Msa1184180:CDS 35.0%
GATGAGGAACTGAACTTATA+AGG - chr8_1:19777504-19777523 None:intergenic 35.0%
! CATGGTAATGAATATGGTTG+AGG - chr8_1:19777549-19777568 None:intergenic 35.0%
TATCAAAATGGTTCCACTGT+TGG + chr8_1:19777590-19777609 Msa1184180:CDS 35.0%
!! TTGATAGCTCTGATCAAAAG+GGG - chr8_1:19777673-19777692 None:intergenic 35.0%
!! CTTTGATAGCTCTGATCAAA+AGG - chr8_1:19777675-19777694 None:intergenic 35.0%
!! GTAAAATCAGTTTCGAGTTC+TGG - chr8_1:19777726-19777745 None:intergenic 35.0%
TGTTCATCAACTCTTTCCAT+TGG - chr8_1:19777753-19777772 None:intergenic 35.0%
!!! TTCCTTTTTTTGAGCCATCA+GGG + chr8_1:19777823-19777842 Msa1184180:CDS 35.0%
!!! TCAATTTTGAAACTCCCTGA+TGG - chr8_1:19777840-19777859 None:intergenic 35.0%
! TCATCTTCTTCTGTTTTCCA+TGG - chr8_1:19776154-19776173 None:intergenic 35.0%
CTTCATCATGTGAAGAAGTA+TGG + chr8_1:19776181-19776200 Msa1184180:CDS 35.0%
! AGTTCTTTGAAGAAGACCTT+TGG - chr8_1:19776233-19776252 None:intergenic 35.0%
AAAGGTCTTCTTCAAAGAAC+TGG + chr8_1:19776232-19776251 Msa1184180:CDS 35.0%
AAAAATGAGACAACCCATGA+AGG - chr8_1:19776608-19776627 None:intergenic 35.0%
!! CATGGGTTGTCTCATTTTTA+TGG + chr8_1:19776609-19776628 Msa1184180:intron 35.0%
AACGGAATAAATGAATGCGT+TGG - chr8_1:19776773-19776792 None:intergenic 35.0%
TGGTAAATAGGATGCAATCT+TGG - chr8_1:19777101-19777120 None:intergenic 35.0%
AAGATTGCATCCTATTTACC+AGG + chr8_1:19777100-19777119 Msa1184180:CDS 35.0%
GATGAGGAACTGAACTTATA+AGG - chr8_1:19777504-19777523 None:intergenic 35.0%
! CATGGTAATGAATATGGTTG+AGG - chr8_1:19777549-19777568 None:intergenic 35.0%
TATCAAAATGGTTCCACTGT+TGG + chr8_1:19777590-19777609 Msa1184180:CDS 35.0%
!! TTGATAGCTCTGATCAAAAG+GGG - chr8_1:19777673-19777692 None:intergenic 35.0%
!! CTTTGATAGCTCTGATCAAA+AGG - chr8_1:19777675-19777694 None:intergenic 35.0%
!! GTAAAATCAGTTTCGAGTTC+TGG - chr8_1:19777726-19777745 None:intergenic 35.0%
TGTTCATCAACTCTTTCCAT+TGG - chr8_1:19777753-19777772 None:intergenic 35.0%
!!! TTCCTTTTTTTGAGCCATCA+GGG + chr8_1:19777823-19777842 Msa1184180:CDS 35.0%
!!! TCAATTTTGAAACTCCCTGA+TGG - chr8_1:19777840-19777859 None:intergenic 35.0%
! AGAAAGATCAAGAGCACGTA+AGG + chr8_1:19776122-19776141 Msa1184180:CDS 40.0%
! AGAAGTATGGTCCAAGAGAT+TGG + chr8_1:19776194-19776213 Msa1184180:CDS 40.0%
AAGAAGACCTTTGGATCGAA+TGG - chr8_1:19776224-19776243 None:intergenic 40.0%
AACATTAAGAAGCAACCCCA+TGG - chr8_1:19776547-19776566 None:intergenic 40.0%
GTAGCACACAACACAAACAT+TGG - chr8_1:19776841-19776860 None:intergenic 40.0%
AGTTTACAATCGAGGAAGAG+AGG + chr8_1:19777035-19777054 Msa1184180:CDS 40.0%
GAGGATTGTGATAGAATTGC+AGG + chr8_1:19777054-19777073 Msa1184180:CDS 40.0%
GTCTGTTCTTCCTGGTAAAT+AGG - chr8_1:19777113-19777132 None:intergenic 40.0%
ACATCATTGTCTGTTCTTCC+TGG - chr8_1:19777121-19777140 None:intergenic 40.0%
TGATCCAATGACTACTGATG+TGG - chr8_1:19777326-19777345 None:intergenic 40.0%
ACATATGCAGCCATTAGATC+AGG - chr8_1:19777408-19777427 None:intergenic 40.0%
TAAGTTCAGTTCCTCATCAG+AGG + chr8_1:19777506-19777525 Msa1184180:CDS 40.0%
AAGTTCAGTTCCTCATCAGA+GGG + chr8_1:19777507-19777526 Msa1184180:CDS 40.0%
TGATCGGAATTCTCAATGCA+TGG - chr8_1:19777567-19777586 None:intergenic 40.0%
ACGTAAATCGCATCGAAACT+AGG - chr8_1:19777636-19777655 None:intergenic 40.0%
CTGAGGAAATGCAATGTGTT+CGG - chr8_1:19777700-19777719 None:intergenic 40.0%
ATTTGATGTGTTTGGTCCCT+TGG + chr8_1:19777779-19777798 Msa1184180:CDS 40.0%
CCAAACTCAGATGTTTCCAA+GGG - chr8_1:19777798-19777817 None:intergenic 40.0%
TCCAAACTCAGATGTTTCCA+AGG - chr8_1:19777799-19777818 None:intergenic 40.0%
GGAAACATCTGAGTTTGGAA+TGG + chr8_1:19777800-19777819 Msa1184180:CDS 40.0%
!!! GTTCCTTTTTTTGAGCCATC+AGG + chr8_1:19777822-19777841 Msa1184180:CDS 40.0%
ATGTGATCAAACATGTCCTC+TGG - chr8_1:19777882-19777901 None:intergenic 40.0%
AGCTTAGAGGGATTTGAATG+TGG - chr8_1:19777909-19777928 None:intergenic 40.0%
! AGAAAGATCAAGAGCACGTA+AGG + chr8_1:19776122-19776141 Msa1184180:CDS 40.0%
! AGAAGTATGGTCCAAGAGAT+TGG + chr8_1:19776194-19776213 Msa1184180:CDS 40.0%
AAGAAGACCTTTGGATCGAA+TGG - chr8_1:19776224-19776243 None:intergenic 40.0%
AACATTAAGAAGCAACCCCA+TGG - chr8_1:19776547-19776566 None:intergenic 40.0%
GTAGCACACAACACAAACAT+TGG - chr8_1:19776841-19776860 None:intergenic 40.0%
AGTTTACAATCGAGGAAGAG+AGG + chr8_1:19777035-19777054 Msa1184180:CDS 40.0%
GAGGATTGTGATAGAATTGC+AGG + chr8_1:19777054-19777073 Msa1184180:CDS 40.0%
GTCTGTTCTTCCTGGTAAAT+AGG - chr8_1:19777113-19777132 None:intergenic 40.0%
ACATCATTGTCTGTTCTTCC+TGG - chr8_1:19777121-19777140 None:intergenic 40.0%
TGATCCAATGACTACTGATG+TGG - chr8_1:19777326-19777345 None:intergenic 40.0%
ACATATGCAGCCATTAGATC+AGG - chr8_1:19777408-19777427 None:intergenic 40.0%
TAAGTTCAGTTCCTCATCAG+AGG + chr8_1:19777506-19777525 Msa1184180:CDS 40.0%
AAGTTCAGTTCCTCATCAGA+GGG + chr8_1:19777507-19777526 Msa1184180:CDS 40.0%
TGATCGGAATTCTCAATGCA+TGG - chr8_1:19777567-19777586 None:intergenic 40.0%
ACGTAAATCGCATCGAAACT+AGG - chr8_1:19777636-19777655 None:intergenic 40.0%
CTGAGGAAATGCAATGTGTT+CGG - chr8_1:19777700-19777719 None:intergenic 40.0%
ATTTGATGTGTTTGGTCCCT+TGG + chr8_1:19777779-19777798 Msa1184180:CDS 40.0%
CCAAACTCAGATGTTTCCAA+GGG - chr8_1:19777798-19777817 None:intergenic 40.0%
TCCAAACTCAGATGTTTCCA+AGG - chr8_1:19777799-19777818 None:intergenic 40.0%
GGAAACATCTGAGTTTGGAA+TGG + chr8_1:19777800-19777819 Msa1184180:CDS 40.0%
!!! GTTCCTTTTTTTGAGCCATC+AGG + chr8_1:19777822-19777841 Msa1184180:CDS 40.0%
ATGTGATCAAACATGTCCTC+TGG - chr8_1:19777882-19777901 None:intergenic 40.0%
AGCTTAGAGGGATTTGAATG+TGG - chr8_1:19777909-19777928 None:intergenic 40.0%
! GATCAAGAGCACGTAAGGAA+AGG + chr8_1:19776127-19776146 Msa1184180:CDS 45.0%
! CAAGTCTTGTCGTCTTCGTT+GGG + chr8_1:19776255-19776274 Msa1184180:CDS 45.0%
! TTCTGGTCTCTCTCTGAAAG+TGG + chr8_1:19777007-19777026 Msa1184180:intron 45.0%
! TCTGGTCTCTCTCTGAAAGT+GGG + chr8_1:19777008-19777027 Msa1184180:intron 45.0%
TGGGTGCAAGTTTACAATCG+AGG + chr8_1:19777027-19777046 Msa1184180:CDS 45.0%
! TCTGGAGCAGTAGACAAAAG+AGG + chr8_1:19777149-19777168 Msa1184180:CDS 45.0%
TGGAACACGGGAAGAAACTT+TGG - chr8_1:19777233-19777252 None:intergenic 45.0%
TTACCTCGTGAGATGGAACA+CGG - chr8_1:19777246-19777265 None:intergenic 45.0%
GAGGGCCCGAATTAAAAGAA+AGG - chr8_1:19777301-19777320 None:intergenic 45.0%
ATGACTACTGATGTGGCTGA+GGG - chr8_1:19777319-19777338 None:intergenic 45.0%
AATGACTACTGATGTGGCTG+AGG - chr8_1:19777320-19777339 None:intergenic 45.0%
TCAGCCACATCAGTAGTCAT+TGG + chr8_1:19777319-19777338 Msa1184180:intron 45.0%
TGTAACTTCCCGCTTGAATG+CGG + chr8_1:19777425-19777444 Msa1184180:intron 45.0%
AATTCGTTCCCGCATTCAAG+CGG - chr8_1:19777437-19777456 None:intergenic 45.0%
!! GTTTCGAGTTCTGGAATCTG+AGG - chr8_1:19777717-19777736 None:intergenic 45.0%
CCCTTGGAAACATCTGAGTT+TGG + chr8_1:19777795-19777814 Msa1184180:CDS 45.0%
CTCCCTGATGGCTCAAAAAA+AGG - chr8_1:19777828-19777847 None:intergenic 45.0%
! GATCAAGAGCACGTAAGGAA+AGG + chr8_1:19776127-19776146 Msa1184180:CDS 45.0%
! CAAGTCTTGTCGTCTTCGTT+GGG + chr8_1:19776255-19776274 Msa1184180:CDS 45.0%
! TTCTGGTCTCTCTCTGAAAG+TGG + chr8_1:19777007-19777026 Msa1184180:intron 45.0%
! TCTGGTCTCTCTCTGAAAGT+GGG + chr8_1:19777008-19777027 Msa1184180:intron 45.0%
TGGGTGCAAGTTTACAATCG+AGG + chr8_1:19777027-19777046 Msa1184180:CDS 45.0%
! TCTGGAGCAGTAGACAAAAG+AGG + chr8_1:19777149-19777168 Msa1184180:CDS 45.0%
TGGAACACGGGAAGAAACTT+TGG - chr8_1:19777233-19777252 None:intergenic 45.0%
TTACCTCGTGAGATGGAACA+CGG - chr8_1:19777246-19777265 None:intergenic 45.0%
GAGGGCCCGAATTAAAAGAA+AGG - chr8_1:19777301-19777320 None:intergenic 45.0%
ATGACTACTGATGTGGCTGA+GGG - chr8_1:19777319-19777338 None:intergenic 45.0%
AATGACTACTGATGTGGCTG+AGG - chr8_1:19777320-19777339 None:intergenic 45.0%
TCAGCCACATCAGTAGTCAT+TGG + chr8_1:19777319-19777338 Msa1184180:intron 45.0%
TGTAACTTCCCGCTTGAATG+CGG + chr8_1:19777425-19777444 Msa1184180:intron 45.0%
AATTCGTTCCCGCATTCAAG+CGG - chr8_1:19777437-19777456 None:intergenic 45.0%
!! GTTTCGAGTTCTGGAATCTG+AGG - chr8_1:19777717-19777736 None:intergenic 45.0%
CCCTTGGAAACATCTGAGTT+TGG + chr8_1:19777795-19777814 Msa1184180:CDS 45.0%
CTCCCTGATGGCTCAAAAAA+AGG - chr8_1:19777828-19777847 None:intergenic 45.0%
AGCACGTAAGGAAAGGTCCA+TGG + chr8_1:19776134-19776153 Msa1184180:CDS 50.0%
CGAATGGAGCTCCAATCTCT+TGG - chr8_1:19776208-19776227 None:intergenic 50.0%
TGGAGCTCCATTCGATCCAA+AGG + chr8_1:19776214-19776233 Msa1184180:CDS 50.0%
! GCAAGTCTTGTCGTCTTCGT+TGG + chr8_1:19776254-19776273 Msa1184180:CDS 50.0%
GAGCAGTAGACAAAAGAGGC+TGG + chr8_1:19777153-19777172 Msa1184180:CDS 50.0%
! GTAGACAAAAGAGGCTGGCT+AGG + chr8_1:19777158-19777177 Msa1184180:CDS 50.0%
TACCTCGTGAGATGGAACAC+GGG - chr8_1:19777245-19777264 None:intergenic 50.0%
GTAACTTCCCGCTTGAATGC+GGG + chr8_1:19777426-19777445 Msa1184180:intron 50.0%
ATTCGTTCCCGCATTCAAGC+GGG - chr8_1:19777436-19777455 None:intergenic 50.0%
TGATGCTTCTCCCTCTGATG+AGG - chr8_1:19777520-19777539 None:intergenic 50.0%
CGCATCGAAACTAGGTTGCT+CGG - chr8_1:19777628-19777647 None:intergenic 50.0%
AGCACGTAAGGAAAGGTCCA+TGG + chr8_1:19776134-19776153 Msa1184180:CDS 50.0%
CGAATGGAGCTCCAATCTCT+TGG - chr8_1:19776208-19776227 None:intergenic 50.0%
TGGAGCTCCATTCGATCCAA+AGG + chr8_1:19776214-19776233 Msa1184180:CDS 50.0%
! GCAAGTCTTGTCGTCTTCGT+TGG + chr8_1:19776254-19776273 Msa1184180:CDS 50.0%
GAGCAGTAGACAAAAGAGGC+TGG + chr8_1:19777153-19777172 Msa1184180:CDS 50.0%
! GTAGACAAAAGAGGCTGGCT+AGG + chr8_1:19777158-19777177 Msa1184180:CDS 50.0%
TACCTCGTGAGATGGAACAC+GGG - chr8_1:19777245-19777264 None:intergenic 50.0%
GTAACTTCCCGCTTGAATGC+GGG + chr8_1:19777426-19777445 Msa1184180:intron 50.0%
ATTCGTTCCCGCATTCAAGC+GGG - chr8_1:19777436-19777455 None:intergenic 50.0%
TGATGCTTCTCCCTCTGATG+AGG - chr8_1:19777520-19777539 None:intergenic 50.0%
CGCATCGAAACTAGGTTGCT+CGG - chr8_1:19777628-19777647 None:intergenic 50.0%
TTCCCGTGTTCCATCTCACG+AGG + chr8_1:19777240-19777259 Msa1184180:CDS 55.0%
TTCCCGTGTTCCATCTCACG+AGG + chr8_1:19777240-19777259 Msa1184180:CDS 55.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 19776097 19777932 19776097 ID=Msa1184180;Name=Msa1184180
chr8_1 mRNA 19776097 19777932 19776097 ID=Msa1184180-mRNA-1;Parent=Msa1184180;Name=Msa1184180-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|3|0|292
chr8_1 exon 19776097 19776305 19776097 ID=Msa1184180-mRNA-1:exon:7622;Parent=Msa1184180-mRNA-1
chr8_1 exon 19777027 19777261 19777027 ID=Msa1184180-mRNA-1:exon:7623;Parent=Msa1184180-mRNA-1
chr8_1 exon 19777498 19777932 19777498 ID=Msa1184180-mRNA-1:exon:7624;Parent=Msa1184180-mRNA-1
chr8_1 CDS 19776097 19776305 19776097 ID=Msa1184180-mRNA-1:cds;Parent=Msa1184180-mRNA-1
chr8_1 CDS 19777027 19777261 19777027 ID=Msa1184180-mRNA-1:cds;Parent=Msa1184180-mRNA-1
chr8_1 CDS 19777498 19777932 19777498 ID=Msa1184180-mRNA-1:cds;Parent=Msa1184180-mRNA-1
Gene Sequence

>Msa1184180

AGAAGAAAAAGAAAAATGCATGGGAAGAAAGATCAAGAGCACGTAAGGAAAGGTCCATGGAAAACAGAAGAAGATGAAGTGTTACTTCATCATGTGAAGAAGTATGGTCCAAGAGATTGGAGCTCCATTCGATCCAAAGGTCTTCTTCAAAGAACTGGCAAGTCTTGTCGTCTTCGTTGGGTCAATAAACTTCGACCAAACCTCAAAAATGGGTGCAAGTTTACAATCGAGGAAGAGAGGATTGTGATAGAATTGCAGGAACAATTTGGAAACAAATGGGCCAAGATTGCATCCTATTTACCAGGAAGAACAGACAATGATGTCAAGAATTTCTGGAGCAGTAGACAAAAGAGGCTGGCTAGGCTTCTCAAAACATCATCGTCAACAACCTCAAAGTCACACAAAAACAAAGCCAAAGTTTCTTCCCGTGTTCCATCTCACGAGGTTCCTTATAAGTTCAGTTCCTCATCAGAGGGAGAAGCATCATCAAAACCTCAACCATATTCATTACCATGCATTGAGAATTCCGATCAAGTTATCAAAATGGTTCCACTGTTGGATCTTAAAAAATCCGAGCAACCTAGTTTCGATGCGATTTACGTTGAACAAGAGTTCACCCCTTTTGATCAGAGCTATCAAAGCACCGAACACATTGCATTTCCTCAGATTCCAGAACTCGAAACTGATTTTACGTTTCCAATGGAAAGAGTTGATGAACAAAATTTATTTGATGTGTTTGGTCCCTTGGAAACATCTGAGTTTGGAATGGTTCCTTTTTTTGAGCCATCAGGGAGTTTCAAAATTGATAATTTCTTTGATGATTTTCCAGAGGACATGTTTGATCACATTGAGCCACATTCAAATCCCTCTAAGCTCTGA
Protein sequence

>Msa1184180

RRKRKMHGKKDQEHVRKGPWKTEEDEVLLHHVKKYGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKNGCKFTIEEERIVIELQEQFGNKWAKIASYLPGRTDNDVKNFWSSRQKRLARLLKTSSSTTSKSHKNKAKVSSRVPSHEVPYKFSSSSEGEASSKPQPYSLPCIENSDQVIKMVPLLDLKKSEQPSFDAIYVEQEFTPFDQSYQSTEHIAFPQIPELETDFTFPMERVDEQNLFDVFGPLETSEFGMVPFFEPSGSFKIDNFFDDFPEDMFDHIEPHSNPSKL*