AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1185340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1185340 MtrunA17_Chr8g0351041 95.506 89 4 0 1 89 1 89 2.03e-58 176
Msa1185340 MtrunA17_Chr8g0351031 94.382 89 5 0 1 89 1 89 1.16e-56 174
Msa1185340 MtrunA17_Chr7g0246431 76.404 89 20 1 1 89 1 88 5.14e-44 141
Msa1185340 MtrunA17_Chr4g0057151 79.730 74 15 0 1 74 1 74 1.82e-38 127
Msa1185340 MtrunA17_Chr3g0097101 67.416 89 28 1 1 89 16 103 3.01e-34 117
Msa1185340 MtrunA17_Chr2g0284911 66.667 87 28 1 3 89 18 103 5.46e-34 117
Msa1185340 MtrunA17_Chr3g0077501 74.286 70 18 0 1 70 1 70 3.21e-33 114
Msa1185340 MtrunA17_Chr8g0380021 65.517 87 29 1 3 89 19 104 3.33e-33 114
Msa1185340 MtrunA17_Chr8g0351051 72.857 70 19 0 1 70 1 70 8.23e-32 111
Msa1185340 MtrunA17_Chr5g0420091 70.423 71 20 1 1 70 1 71 1.87e-31 109
Msa1185340 MtrunA17_Chr4g0061671 56.383 94 32 2 1 85 1 94 6.81e-31 107
Msa1185340 MtrunA17_Chr3g0122251 73.239 71 18 1 1 70 1 71 1.15e-30 108
Msa1185340 MtrunA17_Chr7g0220111 69.014 71 21 1 1 70 1 71 3.85e-30 107
Msa1185340 MtrunA17_Chr6g0455511 70.423 71 20 1 1 70 1 71 5.37e-30 106
Msa1185340 MtrunA17_Chr2g0279821 69.565 69 21 0 1 69 1 69 9.45e-30 105
Msa1185340 MtrunA17_Chr7g0246381 75.410 61 15 0 1 61 1 61 3.17e-29 99.4
Msa1185340 MtrunA17_Chr4g0020221 65.753 73 25 0 1 73 1 73 2.82e-28 102
Msa1185340 MtrunA17_Chr8g0377561 75.862 58 14 0 1 58 1 58 3.16e-28 97.8
Msa1185340 MtrunA17_Chr1g0204111 64.286 70 25 0 1 70 17 86 7.15e-28 101
Msa1185340 MtrunA17_Chr8g0366231 66.216 74 24 1 1 73 1 74 7.16e-28 100
Msa1185340 MtrunA17_Chr6g0474371 65.278 72 24 1 1 71 1 72 8.25e-28 99.4
Msa1185340 MtrunA17_Chr5g0412461 60.811 74 29 0 1 74 1 74 1.38e-27 99.8
Msa1185340 MtrunA17_Chr5g0412271 60.811 74 29 0 1 74 1 74 1.39e-27 99.8
Msa1185340 MtrunA17_Chr4g0049541 66.667 69 23 0 1 69 1 69 2.68e-27 99.0
Msa1185340 MtrunA17_Chr7g0220121 61.538 78 27 2 1 75 1 78 7.09e-27 98.6
Msa1185340 MtrunA17_Chr5g0411691 62.319 69 26 0 1 69 1 69 7.99e-27 98.2
Msa1185340 MtrunA17_Chr2g0308251 72.881 59 16 0 1 59 1 59 9.08e-27 93.6
Msa1185340 MtrunA17_Chr5g0427401 62.319 69 26 0 1 69 1 69 9.13e-27 97.8
Msa1185340 MtrunA17_Chr5g0427921 68.333 60 19 0 1 60 1 60 1.16e-26 92.8
Msa1185340 MtrunA17_Chr4g0061691 67.143 70 22 1 1 69 1 70 1.21e-26 97.4
Msa1185340 MtrunA17_Chr1g0173161 69.355 62 19 0 1 62 1 62 1.99e-26 92.8
Msa1185340 MtrunA17_Chr4g0018421 54.118 85 38 1 1 84 1 85 3.16e-26 95.5
Msa1185340 MtrunA17_Chr4g0049901 51.685 89 40 1 1 86 27 115 8.42e-26 95.5
Msa1185340 MtrunA17_Chr3g0134451 65.278 72 24 1 1 71 1 72 5.91e-25 94.7
Msa1185340 MtrunA17_Chr5g0420081 56.322 87 31 2 1 80 1 87 6.96e-25 92.8
Msa1185340 MtrunA17_Chr3g0125241 52.778 72 32 1 1 70 26 97 1.12e-23 89.4
Msa1185340 MtrunA17_Chr3g0142191 67.213 61 20 0 1 61 1 61 1.42e-23 89.4
Msa1185340 MtrunA17_Chr5g0425191 66.102 59 20 0 1 59 1 59 7.56e-23 84.3
Msa1185340 MtrunA17_Chr1g0164791 56.000 75 31 1 1 73 1 75 8.63e-23 87.4
Msa1185340 MtrunA17_Chr1g0159661 50.704 71 33 1 1 69 1 71 1.90e-22 85.5
Msa1185340 MtrunA17_Chr4g0044071 62.712 59 22 0 1 59 1 59 2.58e-22 83.2
Msa1185340 MtrunA17_Chr5g0404951 52.778 72 32 1 1 70 1 72 9.14e-21 82.0
Msa1185340 MtrunA17_Chr2g0292791 53.731 67 31 0 3 69 10 76 1.12e-19 79.3
Msa1185340 MtrunA17_Chr1g0208581 50.746 67 33 0 3 69 10 76 2.14e-19 78.6
Msa1185340 MtrunA17_Chr3g0089141 50.746 67 33 0 3 69 10 76 2.90e-19 78.2
Msa1185340 MtrunA17_Chr1g0208561 50.746 67 33 0 3 69 10 76 3.30e-19 78.2
Msa1185340 MtrunA17_Chr1g0166611 72.917 48 13 0 13 60 17 64 5.07e-19 75.5
Msa1185340 MtrunA17_Chr1g0180591 43.678 87 44 1 1 87 1 82 9.33e-19 75.9
Msa1185340 MtrunA17_Chr8g0376821 44.828 87 43 1 1 87 1 82 1.57e-18 75.5
Msa1185340 MtrunA17_Chr8g0355091 52.239 67 32 0 3 69 10 76 1.72e-18 76.3
Msa1185340 MtrunA17_Chr3g0099411 50.746 67 33 0 3 69 10 76 1.80e-18 75.9
Msa1185340 MtrunA17_Chr1g0206721 50.746 67 33 0 3 69 10 76 3.18e-18 75.5
Msa1185340 MtrunA17_Chr1g0206701 50.746 67 33 0 3 69 10 76 3.28e-18 75.5
Msa1185340 MtrunA17_Chr8g0379021 47.887 71 37 0 3 73 13 83 4.20e-18 74.3
Msa1185340 MtrunA17_Chr3g0099421 52.239 67 32 0 3 69 35 101 4.56e-18 75.5
Msa1185340 MtrunA17_Chr4g0018951 56.667 60 26 0 14 73 24 83 5.35e-18 73.6
Msa1185340 MtrunA17_Chr5g0419601 43.373 83 42 1 3 85 10 87 8.63e-18 74.3
Msa1185340 MtrunA17_Chr1g0187361 50.746 67 33 0 3 69 10 76 1.00e-17 74.3
Msa1185340 MtrunA17_Chr1g0149391 49.254 67 34 0 3 69 10 76 1.31e-17 73.9
Msa1185340 MtrunA17_Chr2g0325971 49.254 67 34 0 3 69 10 76 1.32e-17 73.9
Msa1185340 MtrunA17_Chr1g0206991 47.761 67 35 0 3 69 10 76 2.38e-17 72.4
Msa1185340 MtrunA17_Chr5g0422421 50.746 67 33 0 3 69 10 76 2.47e-17 73.2
Msa1185340 MtrunA17_Chr2g0317451 49.254 67 34 0 3 69 10 76 2.74e-17 73.2
Msa1185340 MtrunA17_Chr2g0317481 49.254 67 34 0 3 69 10 76 2.83e-17 73.2
Msa1185340 MtrunA17_Chr1g0169761 49.275 69 35 0 1 69 1 69 3.76e-17 71.6
Msa1185340 MtrunA17_Chr1g0175611 47.826 69 36 0 1 69 1 69 4.78e-17 71.2
Msa1185340 MtrunA17_Chr1g0175601 42.857 91 50 1 1 89 1 91 5.40e-17 71.2
Msa1185340 MtrunA17_Chr1g0188671 50.746 67 33 0 3 69 48 114 7.77e-17 72.4
Msa1185340 MtrunA17_Chr8g0357771 46.377 69 37 0 1 69 1 69 1.15e-16 70.5
Msa1185340 MtrunA17_Chr4g0074101 42.529 87 45 1 1 87 1 82 1.26e-16 70.9
Msa1185340 MtrunA17_Chr2g0333981 42.045 88 48 1 1 88 11 95 2.09e-16 69.7
Msa1185340 MtrunA17_Chr5g0417661 52.830 53 25 0 1 53 56 108 2.93e-16 68.2
Msa1185340 MtrunA17_Chr5g0422941 47.761 67 35 0 3 69 10 76 3.72e-16 70.1
Msa1185340 MtrunA17_Chr4g0052081 44.928 69 38 0 1 69 1 69 5.34e-16 68.6
Msa1185340 MtrunA17_Chr2g0300421 46.269 67 36 0 3 69 10 76 7.73e-16 68.2
Msa1185340 MtrunA17_Chr3g0089151 45.714 70 36 1 2 69 7 76 1.31e-15 66.6
Msa1185340 MtrunA17_Chr1g0187351 44.928 69 38 0 11 79 1 69 1.61e-15 64.7
Msa1185340 MtrunA17_Chr2g0300441 46.154 65 35 0 5 69 12 76 2.97e-15 67.8
Msa1185340 MtrunA17_Chr4g0052061 47.458 59 31 0 1 59 1 59 6.18e-15 65.5
Msa1185340 MtrunA17_Chr3g0111841 48.333 60 31 0 7 66 1 60 7.83e-15 63.2
Msa1185340 MtrunA17_Chr3g0119901 44.776 67 37 0 3 69 10 76 8.76e-15 66.2
Msa1185340 MtrunA17_Chr8g0356071 37.079 89 54 2 1 87 1 89 9.29e-15 65.1
Msa1185340 MtrunA17_Chr1g0206691 49.153 59 30 0 11 69 1 59 1.33e-14 65.9
Msa1185340 MtrunA17_Chr3g0085241 43.284 67 38 0 3 69 42 108 3.30e-14 65.1
Msa1185340 MtrunA17_Chr4g0060841 38.636 88 52 1 1 86 1 88 2.90e-13 63.2
Msa1185340 MtrunA17_Chr4g0071601 42.466 73 39 1 15 87 25 94 6.89e-13 60.8
Msa1185340 MtrunA17_Chr7g0238991 43.478 69 38 1 2 69 20 88 2.58e-12 60.1
Msa1185340 MtrunA17_Chr6g0457851 43.077 65 34 1 1 65 11 72 6.75e-11 56.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1185340 AT2G45660.2 73.034 89 22 1 1 87 1 89 1.28e-44 141
Msa1185340 AT2G45660.1 73.034 89 22 1 1 87 1 89 9.85e-44 140
Msa1185340 AT4G11880.2 74.444 90 20 2 1 89 1 88 1.14e-41 134
Msa1185340 AT4G11880.3 74.444 90 20 2 1 89 1 88 1.14e-41 134
Msa1185340 AT4G22950.2 73.034 89 22 1 1 89 1 87 6.56e-41 132
Msa1185340 AT4G11880.4 74.444 90 20 2 1 89 1 88 1.17e-40 133
Msa1185340 AT4G11880.1 74.444 90 20 2 1 89 1 88 1.17e-40 133
Msa1185340 AT5G62165.17 66.292 89 30 0 1 89 1 89 1.85e-40 130
Msa1185340 AT5G62165.12 66.292 89 30 0 1 89 1 89 1.85e-40 130
Msa1185340 AT5G62165.11 66.292 89 30 0 1 89 1 89 1.85e-40 130
Msa1185340 AT5G62165.6 66.292 89 30 0 1 89 1 89 2.09e-40 130
Msa1185340 AT5G62165.9 66.292 89 30 0 1 89 1 89 2.09e-40 130
Msa1185340 AT5G62165.7 66.292 89 30 0 1 89 1 89 2.09e-40 130
Msa1185340 AT5G62165.8 66.292 89 30 0 1 89 1 89 2.09e-40 130
Msa1185340 AT5G62165.13 66.292 89 30 0 1 89 1 89 2.09e-40 130
Msa1185340 AT5G62165.14 67.442 86 28 0 1 86 1 86 4.68e-40 128
Msa1185340 AT4G22950.3 78.049 82 10 1 1 74 1 82 1.12e-39 130
Msa1185340 AT4G22950.1 78.049 82 10 1 1 74 1 82 1.12e-39 130
Msa1185340 AT5G62165.3 66.292 89 30 0 1 89 1 89 2.52e-39 129
Msa1185340 AT5G62165.1 66.292 89 30 0 1 89 1 89 2.52e-39 129
Msa1185340 AT5G62165.2 66.292 89 30 0 1 89 1 89 2.52e-39 129
Msa1185340 AT5G62165.10 66.292 89 30 0 1 89 1 89 2.90e-39 129
Msa1185340 AT5G62165.4 66.292 89 30 0 1 89 1 89 2.90e-39 129
Msa1185340 AT4G09960.2 77.143 70 16 0 1 70 1 70 9.91e-35 118
Msa1185340 AT4G09960.1 77.143 70 16 0 1 70 1 70 1.29e-34 118
Msa1185340 AT4G09960.6 77.143 70 16 0 1 70 2 71 1.32e-34 118
Msa1185340 AT4G09960.5 77.143 70 16 0 1 70 11 80 2.18e-34 117
Msa1185340 AT4G09960.3 77.143 70 16 0 1 70 27 96 5.15e-34 117
Msa1185340 AT4G09960.4 77.143 70 16 0 1 70 96 165 1.73e-33 117
Msa1185340 AT2G03710.3 58.242 91 34 2 1 89 1 89 1.87e-33 114
Msa1185340 AT3G58780.1 64.045 89 31 1 1 89 16 103 3.42e-33 115
Msa1185340 AT3G58780.5 64.045 89 31 1 1 89 22 109 3.72e-33 115
Msa1185340 AT4G18960.1 71.053 76 22 0 3 78 19 94 7.47e-33 114
Msa1185340 AT2G42830.1 64.368 87 30 1 3 89 18 103 7.58e-33 114
Msa1185340 AT2G42830.2 64.368 87 30 1 3 89 18 103 7.85e-33 114
Msa1185340 AT3G58780.4 65.517 87 29 1 3 89 18 103 8.21e-33 114
Msa1185340 AT2G45650.1 76.812 69 16 0 1 69 1 69 1.04e-32 114
Msa1185340 AT2G03710.2 58.242 91 34 2 1 89 1 89 2.22e-32 113
Msa1185340 AT2G03710.1 58.242 91 34 2 1 89 1 89 2.30e-32 113
Msa1185340 AT5G51860.2 70.270 74 22 0 1 74 1 74 3.86e-32 111
Msa1185340 AT5G51860.1 70.270 74 22 0 1 74 1 74 5.50e-32 110
Msa1185340 AT3G02310.2 59.341 91 34 2 1 88 1 91 1.42e-31 109
Msa1185340 AT5G15800.1 59.341 91 34 2 1 88 1 91 1.86e-31 110
Msa1185340 AT5G15800.2 59.341 91 34 2 1 88 1 91 2.42e-31 110
Msa1185340 AT3G02310.1 59.341 91 34 2 1 88 1 91 3.02e-31 110
Msa1185340 AT3G57230.2 69.014 71 22 0 1 71 1 71 5.88e-31 106
Msa1185340 AT3G57230.1 71.014 69 20 0 1 69 1 69 2.21e-30 107
Msa1185340 AT3G57230.4 71.014 69 20 0 1 69 1 69 2.21e-30 107
Msa1185340 AT3G61120.1 57.303 89 35 1 1 89 1 86 2.24e-30 107
Msa1185340 AT5G13790.1 59.302 86 35 0 1 86 1 86 2.26e-30 108
Msa1185340 AT5G13790.2 69.444 72 22 0 1 72 1 72 2.30e-30 108
Msa1185340 AT1G24260.3 71.831 71 19 1 1 70 1 71 5.06e-30 106
Msa1185340 AT1G24260.1 71.831 71 19 1 1 70 1 71 6.80e-30 106
Msa1185340 AT1G24260.2 71.831 71 19 1 1 70 1 71 6.87e-30 106
Msa1185340 AT5G51870.2 69.565 69 21 0 1 69 1 69 6.90e-30 104
Msa1185340 AT5G51870.5 69.565 69 21 0 1 69 24 92 2.13e-29 103
Msa1185340 AT5G51870.1 69.565 69 21 0 1 69 1 69 2.16e-29 104
Msa1185340 AT5G51870.4 69.565 69 21 0 1 69 1 69 6.22e-29 103
Msa1185340 AT5G51870.3 69.565 69 21 0 1 69 11 79 7.81e-29 103
Msa1185340 AT2G22540.3 54.348 92 38 1 1 88 1 92 2.64e-28 102
Msa1185340 AT2G22540.1 54.348 92 38 1 1 88 1 92 2.64e-28 102
Msa1185340 AT3G58780.3 75.410 61 15 0 1 61 16 76 2.92e-28 102
Msa1185340 AT3G58780.2 59.551 89 28 2 1 89 16 96 4.61e-28 101
Msa1185340 AT4G37940.3 62.667 75 27 1 1 75 1 74 4.99e-28 99.8
Msa1185340 AT4G37940.4 65.217 69 24 0 1 69 1 69 7.46e-28 100
Msa1185340 AT4G37940.1 62.667 75 27 1 1 75 1 74 8.41e-28 100
Msa1185340 AT5G60910.1 68.571 70 21 1 1 69 1 70 2.11e-27 100
Msa1185340 AT1G69120.2 57.303 89 37 1 1 88 1 89 2.89e-27 99.4
Msa1185340 AT3G30260.1 59.524 84 32 2 1 82 1 84 3.55e-27 99.8
Msa1185340 AT1G69120.1 57.303 89 37 1 1 88 1 89 5.56e-27 99.4
Msa1185340 AT3G57390.3 62.319 69 26 0 1 69 1 69 1.16e-26 97.8
Msa1185340 AT2G22630.1 63.768 69 25 0 1 69 1 69 1.18e-26 97.8
Msa1185340 AT2G22630.2 63.768 69 25 0 1 69 1 69 1.18e-26 97.8
Msa1185340 AT2G14210.1 67.143 70 22 1 1 69 1 70 1.36e-26 97.8
Msa1185340 AT2G14210.2 67.143 70 22 1 1 69 1 70 1.75e-26 97.4
Msa1185340 AT3G57390.1 62.319 69 26 0 1 69 1 69 2.25e-26 97.8
Msa1185340 AT1G26310.1 62.162 74 27 1 1 73 1 74 1.24e-25 95.9
Msa1185340 AT4G24540.1 56.098 82 35 1 1 81 1 82 1.32e-25 94.7
Msa1185340 AT1G71692.1 59.459 74 29 1 1 73 1 74 1.91e-25 94.4
Msa1185340 AT3G54340.1 48.352 91 45 1 1 89 1 91 3.96e-24 91.3
Msa1185340 AT5G23260.3 60.563 71 26 1 1 69 1 71 9.48e-24 90.5
Msa1185340 AT5G23260.2 60.563 71 26 1 1 69 1 71 1.08e-23 90.5
Msa1185340 AT5G23260.1 60.563 71 26 1 1 69 17 87 1.32e-23 90.5
Msa1185340 AT5G10140.2 60.000 70 27 1 1 69 1 70 1.76e-23 88.2
Msa1185340 AT5G10140.3 60.000 70 27 1 1 69 1 70 3.40e-23 87.8
Msa1185340 AT5G10140.4 60.000 70 27 1 1 69 1 70 3.53e-23 87.8
Msa1185340 AT5G10140.1 60.000 70 27 1 1 69 1 70 4.11e-23 87.8
Msa1185340 AT2G22540.2 48.913 92 38 2 1 88 1 87 8.49e-23 87.8
Msa1185340 AT1G77980.1 52.273 88 38 2 1 84 1 88 2.95e-22 88.2
Msa1185340 AT5G20240.2 52.778 72 32 1 1 70 1 72 3.64e-22 84.3
Msa1185340 AT5G65070.4 57.143 70 29 1 1 69 1 70 4.93e-22 84.0
Msa1185340 AT1G22130.1 58.333 72 29 1 1 71 1 72 8.91e-22 87.0
Msa1185340 AT5G65050.2 53.425 73 33 1 1 72 1 73 1.33e-21 83.6
Msa1185340 AT5G65070.1 57.143 70 29 1 1 69 1 70 1.52e-21 84.0
Msa1185340 AT5G20240.1 52.778 72 32 1 1 70 1 72 1.96e-21 84.0
Msa1185340 AT5G65050.1 53.425 73 33 1 1 72 1 73 3.68e-21 82.4
Msa1185340 AT5G65050.5 53.425 73 33 1 1 72 1 73 4.01e-21 82.4
Msa1185340 AT5G65070.2 57.143 70 29 1 1 69 1 70 4.18e-21 83.6
Msa1185340 AT5G65050.3 53.425 73 33 1 1 72 1 73 4.21e-21 82.8
Msa1185340 AT5G65070.5 57.143 70 29 1 1 69 1 70 4.23e-21 83.2
Msa1185340 AT5G23260.4 60.563 71 26 1 1 69 17 87 2.50e-20 82.0
Msa1185340 AT5G65070.3 62.712 59 22 0 1 59 1 59 5.79e-20 80.5
Msa1185340 AT1G77950.3 47.727 88 42 2 1 84 1 88 5.88e-20 80.9
Msa1185340 AT1G77950.2 47.727 88 42 2 1 84 1 88 5.88e-20 80.9
Msa1185340 AT1G77950.1 47.727 88 42 2 1 84 1 88 5.88e-20 80.9
Msa1185340 AT1G77950.4 47.727 88 42 2 1 84 1 88 5.88e-20 80.9
Msa1185340 AT5G65060.3 50.685 73 35 1 1 72 1 73 1.10e-19 79.0
Msa1185340 AT5G65060.2 50.685 73 35 1 1 72 1 73 1.30e-19 78.6
Msa1185340 AT5G65060.1 50.685 73 35 1 1 72 1 73 1.43e-19 78.6
Msa1185340 AT4G37435.1 54.545 66 30 0 1 66 1 66 6.86e-19 76.6
Msa1185340 AT4G36590.1 53.623 69 32 0 3 71 8 76 7.45e-19 77.8
Msa1185340 AT1G31140.2 46.429 84 43 1 1 82 1 84 1.17e-18 76.6
Msa1185340 AT1G31140.1 46.429 84 43 1 1 82 1 84 1.31e-18 76.6
Msa1185340 AT5G60440.1 43.678 87 44 1 3 89 8 89 1.59e-18 77.8
Msa1185340 AT3G66656.1 46.479 71 38 0 1 71 1 71 7.48e-18 73.9
Msa1185340 AT5G65080.3 50.704 71 34 1 1 70 8 78 1.51e-17 73.6
Msa1185340 AT1G18750.3 45.455 88 46 1 1 86 1 88 4.55e-17 74.3
Msa1185340 AT2G34440.1 44.928 69 38 0 1 69 1 69 5.14e-17 71.6
Msa1185340 AT1G18750.4 45.455 88 46 1 1 86 1 88 6.43e-17 73.9
Msa1185340 AT1G18750.1 45.455 88 46 1 1 86 1 88 6.49e-17 73.9
Msa1185340 AT1G01530.1 45.588 68 37 0 1 68 6 73 1.80e-16 71.6
Msa1185340 AT5G65080.2 55.932 59 26 0 1 59 8 66 2.29e-16 70.5
Msa1185340 AT2G03060.2 43.820 89 48 1 1 87 1 89 2.88e-16 72.0
Msa1185340 AT2G03060.3 43.820 89 48 1 1 87 1 89 2.89e-16 72.0
Msa1185340 AT2G03060.7 43.820 89 48 1 1 87 1 89 2.89e-16 72.0
Msa1185340 AT2G03060.1 43.820 89 48 1 1 87 1 89 2.89e-16 72.0
Msa1185340 AT1G77080.5 55.714 70 30 1 1 69 1 70 3.45e-16 69.3
Msa1185340 AT1G77080.11 55.714 70 30 1 1 69 1 70 3.47e-16 69.7
Msa1185340 AT2G24840.1 49.254 67 34 0 3 69 64 130 4.79e-16 70.5
Msa1185340 AT1G77080.4 55.714 70 30 1 1 69 1 70 8.93e-16 68.9
Msa1185340 AT1G77080.8 55.714 70 30 1 1 69 1 70 2.25e-15 68.2
Msa1185340 AT1G65360.1 41.176 68 40 0 3 70 8 75 5.03e-15 67.4
Msa1185340 AT3G04100.1 42.857 70 40 0 5 74 17 86 5.91e-15 67.0
Msa1185340 AT1G72350.1 42.529 87 48 1 3 89 44 128 2.07e-14 65.9
Msa1185340 AT1G77080.12 54.545 66 30 0 1 66 1 66 2.76e-14 63.9
Msa1185340 AT1G77080.2 54.545 66 30 0 1 66 1 66 5.42e-14 63.9
Msa1185340 AT1G47760.1 42.254 71 41 0 1 71 1 71 1.03e-13 63.2
Msa1185340 AT1G28460.1 47.761 67 35 0 5 71 11 77 2.26e-13 62.4
Msa1185340 AT1G69540.2 50.943 53 26 0 1 53 1 53 3.04e-13 63.5
Msa1185340 AT1G29962.1 48.438 64 33 0 8 71 14 77 4.57e-13 61.6
Msa1185340 AT1G69540.1 50.943 53 26 0 1 53 1 53 8.11e-13 62.4
Msa1185340 AT2G26320.1 42.254 71 39 1 1 69 17 87 9.16e-12 56.6
Msa1185340 AT1G28450.1 42.029 69 40 0 3 71 9 77 2.20e-11 57.0
Msa1185340 AT1G17310.1 52.727 55 24 1 15 69 61 113 5.87e-11 56.6
Msa1185340 AT1G17310.2 52.727 55 24 1 15 69 72 124 7.51e-11 56.2

Find 32 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGTATCGTTCAATCGTTTC+TGG 0.172599 8_1:+22410008 None:intergenic
CCTTGAACTTACCTCAATTA+TGG 0.183089 8_1:-22416289 Msa1185340:five_prime_UTR
CAATTATGGATCACTACTTT+TGG 0.236017 8_1:-22416275 Msa1185340:five_prime_UTR
CAAAGAAAATATATGTATAA+AGG 0.264770 8_1:+22416164 None:intergenic
GGAACAGATTTGCACCAAAT+TGG 0.294529 8_1:+22416135 None:intergenic
TCAAGGAAAAGGATTGGATT+TGG 0.305240 8_1:+22416306 None:intergenic
GTGCCTAGAATAGGAAAATA+AGG 0.334290 8_1:+22416190 None:intergenic
GCAAGAAAAGCAATTTCAAA+AGG 0.395701 8_1:+22416113 None:intergenic
AAAGAAAATATATGTATAAA+GGG 0.409393 8_1:+22416165 None:intergenic
ACATTCTCAAAGAGGAGAAA+TGG 0.421788 8_1:-22415561 Msa1185340:CDS
TTGAGGTAAGTTCAAGGAAA+AGG 0.435373 8_1:+22416295 None:intergenic
TAAAGGGTTGTGCCTAGAAT+AGG 0.448557 8_1:+22416181 None:intergenic
GTAAGTTCAAGGAAAAGGAT+TGG 0.474181 8_1:+22416300 None:intergenic
GAGAAATGGTTTGTTGAAGA+AGG 0.485283 8_1:-22415547 Msa1185340:CDS
TCAACTGATTCAGATGGTGT+TGG 0.512523 8_1:+22409960 None:intergenic
TTTATGAATTTGCTAGCTCT+AGG 0.521973 8_1:-22415458 Msa1185340:intron
ATAGGAAAATAAGGAAGGGA+AGG 0.533757 8_1:+22416199 None:intergenic
CAAGAAAAGCAATTTCAAAA+GGG 0.537225 8_1:+22416114 None:intergenic
CCATAATTGAGGTAAGTTCA+AGG 0.537835 8_1:+22416289 None:intergenic
AATTCATAAAGCCTCCCTCT+TGG 0.547865 8_1:+22415471 None:intergenic
TGAATCAGTTGAAAATACTC+AGG 0.553467 8_1:-22409949 None:intergenic
CTAGAATAGGAAAATAAGGA+AGG 0.556487 8_1:+22416194 None:intergenic
TGTTGGAGTGCTATTAATCC+TGG 0.562354 8_1:+22409977 None:intergenic
AACGATACCGCAATCATACC+AGG 0.576369 8_1:-22409995 Msa1185340:CDS
TAGGAAAATAAGGAAGGGAA+GGG 0.592720 8_1:+22416200 None:intergenic
GGCAAGTAACATTCTCAAAG+AGG 0.594159 8_1:-22415569 Msa1185340:CDS
TAGAATAGGAAAATAAGGAA+GGG 0.610409 8_1:+22416195 None:intergenic
AAAGTAGTGATCCATAATTG+AGG 0.623208 8_1:+22416278 None:intergenic
ATCAGTGTTGTGTGACGCTG+AGG 0.633915 8_1:-22415514 Msa1185340:CDS
ACACAACACTGATAACTCAA+AGG 0.638701 8_1:+22415524 None:intergenic
GTATAGAGAACGCAACAAGT+AGG 0.642404 8_1:-22415590 Msa1185340:CDS
TATTAATCCTGGTATGATTG+CGG 0.644304 8_1:+22409988 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATAAA+AGG + chr8_1:22412204-22412223 None:intergenic 0.0%
!! AAAGAAAATATATGTATAAA+GGG + chr8_1:22410109-22410128 None:intergenic 10.0%
!! AATAATAATTTATTCATCAA+GGG - chr8_1:22410904-22410923 Msa1185340:intron 10.0%
!! TTAAAATTATCTCTATTTAA+TGG + chr8_1:22411999-22412018 None:intergenic 10.0%
!!! TAAGGATATTTTTATATTTT+GGG - chr8_1:22412369-22412388 Msa1185340:intron 10.0%
!!! GTTTAGTTTTTATTTTTTTA+AGG - chr8_1:22412391-22412410 Msa1185340:intron 10.0%
!! ATTTCTAAATTAAAAAAATC+TGG - chr8_1:22415708-22415727 Msa1185340:intron 10.0%
!!! CCTAATTTTATTTTATTTTT+CGG + chr8_1:22415995-22416014 None:intergenic 10.0%
!! CGAAAAATAAAATAAAATTA+GGG - chr8_1:22415993-22416012 Msa1185340:intron 10.0%
!! CAAAGAAAATATATGTATAA+AGG + chr8_1:22410110-22410129 None:intergenic 15.0%
!!! TATTTGATGACTAAATTAAA+TGG + chr8_1:22410272-22410291 None:intergenic 15.0%
!! AGAAAAGAAAAGAAAAAAAA+TGG - chr8_1:22410634-22410653 Msa1185340:intron 15.0%
!! GAATAATAATTTATTCATCA+AGG - chr8_1:22410903-22410922 Msa1185340:intron 15.0%
!! ATTAGATCAATTAAAAATCA+AGG + chr8_1:22411232-22411251 None:intergenic 15.0%
!! AAAATAAATCTCACATAAAA+TGG + chr8_1:22411449-22411468 None:intergenic 15.0%
!! AAAATAAATCTCACATAAAA+TGG + chr8_1:22411449-22411468 None:intergenic 15.0%
!! TACTGTAAATATTTATACTT+TGG - chr8_1:22412329-22412348 Msa1185340:intron 15.0%
!! ACTGTAAATATTTATACTTT+GGG - chr8_1:22412330-22412349 Msa1185340:intron 15.0%
!!! GTAAGGATATTTTTATATTT+TGG - chr8_1:22412368-22412387 Msa1185340:intron 15.0%
!! ACACTATTAATTATTTAATG+TGG + chr8_1:22412522-22412541 None:intergenic 15.0%
!! CCTAACAAAATTAATAAATA+AGG + chr8_1:22413285-22413304 None:intergenic 15.0%
!!! CCTTATTTATTAATTTTGTT+AGG - chr8_1:22413282-22413301 Msa1185340:intron 15.0%
!! AAATAAGTGTACAAAAAAAA+AGG + chr8_1:22413427-22413446 None:intergenic 15.0%
!! AAATATCTAGTTATGATTAA+TGG - chr8_1:22413550-22413569 Msa1185340:intron 15.0%
!! TATAATATTGTCTATTATGT+GGG - chr8_1:22413627-22413646 Msa1185340:intron 15.0%
!!! ACAAAATATTAATTTGAGAT+GGG - chr8_1:22413751-22413770 Msa1185340:intron 15.0%
!!! TTTTTATTATTTTTGTTCTC+CGG + chr8_1:22414093-22414112 None:intergenic 15.0%
!!! TTTGTTTCAATAGTTTTATT+TGG - chr8_1:22414428-22414447 Msa1185340:intron 15.0%
!!! AAATAAAAGTATATACATAC+CGG + chr8_1:22414488-22414507 None:intergenic 15.0%
!!! ATTTTAAAACTAAATTTGGT+TGG + chr8_1:22414532-22414551 None:intergenic 15.0%
!!! AAAGCATATATATTTTGAAA+TGG + chr8_1:22414573-22414592 None:intergenic 15.0%
!!! TATATAGCTTTGTTTTAAAA+AGG + chr8_1:22415359-22415378 None:intergenic 15.0%
!! AAAGTTATTGTTAGAAAATT+AGG + chr8_1:22415788-22415807 None:intergenic 15.0%
!! CCGAAAAATAAAATAAAATT+AGG - chr8_1:22415992-22416011 Msa1185340:intron 15.0%
!! AGTAAAAATGAAATATCAAT+AGG + chr8_1:22416087-22416106 None:intergenic 15.0%
!! TAAAAAATGAGTAAGAGTTA+AGG + chr8_1:22410051-22410070 None:intergenic 20.0%
!!! CTTTTCTGATTAATTGATAT+AGG + chr8_1:22410196-22410215 None:intergenic 20.0%
!! AAAAGCTCTTAAATCTTTAT+AGG - chr8_1:22410211-22410230 Msa1185340:intron 20.0%
!!! TTTTGTTCCTTTGATTTTAT+TGG - chr8_1:22410370-22410389 Msa1185340:intron 20.0%
!!! TTTGTTCCTTTGATTTTATT+GGG - chr8_1:22410371-22410390 Msa1185340:intron 20.0%
!! TCTAGAAAATTATGGAAAAA+TGG + chr8_1:22410438-22410457 None:intergenic 20.0%
!!! CTTTAAGATCTAGAAAATTA+TGG + chr8_1:22410446-22410465 None:intergenic 20.0%
!!! CATAATTTTCTAGATCTTAA+AGG - chr8_1:22410444-22410463 Msa1185340:intron 20.0%
!!! TTTTTGTTACGAATTGAAAT+AGG - chr8_1:22410531-22410550 Msa1185340:intron 20.0%
!! AAATTTATGCTATAAGTACT+TGG - chr8_1:22410576-22410595 Msa1185340:intron 20.0%
!! TACGATTACAAAGATTATAA+CGG - chr8_1:22411346-22411365 Msa1185340:intron 20.0%
!!! ATAAAGTTTTGTTGAGTTTA+TGG + chr8_1:22411624-22411643 None:intergenic 20.0%
!!! TAATTGTTTTGTTGAGTTTA+TGG + chr8_1:22411886-22411905 None:intergenic 20.0%
!! CTTAATGTAACTTAATGTTA+TGG + chr8_1:22412056-22412075 None:intergenic 20.0%
!!! TCAATCATTAATTTCAGTTT+TGG - chr8_1:22412944-22412963 Msa1185340:intron 20.0%
!!! CAATCATTAATTTCAGTTTT+GGG - chr8_1:22412945-22412964 Msa1185340:intron 20.0%
!! TTTAATTGAATCATTAGGTT+AGG - chr8_1:22412979-22412998 Msa1185340:intron 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG + chr8_1:22413371-22413390 None:intergenic 20.0%
!! GTATAATATTGTCTATTATG+TGG - chr8_1:22413626-22413645 Msa1185340:intron 20.0%
!!! CACAAAATATTAATTTGAGA+TGG - chr8_1:22413750-22413769 Msa1185340:intron 20.0%
!!! CATTATACTTTTCTTTCAAA+GGG + chr8_1:22414036-22414055 None:intergenic 20.0%
!!! TTGTAGATATTGATTTTGTT+GGG + chr8_1:22414184-22414203 None:intergenic 20.0%
!!! TTTGTAGATATTGATTTTGT+TGG + chr8_1:22414185-22414204 None:intergenic 20.0%
!! TCAATATCTACAAAAACTAA+TGG - chr8_1:22414191-22414210 Msa1185340:intron 20.0%
!! TTATTTAAAAGTCATTATCC+CGG - chr8_1:22414466-22414485 Msa1185340:intron 20.0%
!!! AATAAAAGTATATACATACC+GGG + chr8_1:22414487-22414506 None:intergenic 20.0%
!! CAATTATAAATGTCATTGTT+TGG + chr8_1:22414626-22414645 None:intergenic 20.0%
!!! TTTCAATGTCAAAAAGTTTT+AGG - chr8_1:22414761-22414780 Msa1185340:intron 20.0%
!!! TTCAATGTCAAAAAGTTTTA+GGG - chr8_1:22414762-22414781 Msa1185340:intron 20.0%
!!! AAAAAAGTTGGATAACTTTT+AGG + chr8_1:22415482-22415501 None:intergenic 20.0%
!! ACATGTGAAAAAATGAAAAT+GGG + chr8_1:22416134-22416153 None:intergenic 20.0%
!! TACATGTGAAAAAATGAAAA+TGG + chr8_1:22416135-22416154 None:intergenic 20.0%
!!! GTCTATATTTTCTTAATACT+TGG - chr8_1:22416198-22416217 Msa1185340:five_prime_UTR 20.0%
!!! AATTATGGATCACTACTTTT+GGG - chr8_1:22409997-22410016 Msa1185340:CDS 25.0%
! TAGAATAGGAAAATAAGGAA+GGG + chr8_1:22410079-22410098 None:intergenic 25.0%
!!! TTTCTTTGATTTTGCCAATT+TGG - chr8_1:22410122-22410141 Msa1185340:intron 25.0%
! CAAGAAAAGCAATTTCAAAA+GGG + chr8_1:22410160-22410179 None:intergenic 25.0%
! AAATTGCTTCCTAGAAAAAA+GGG + chr8_1:22410245-22410264 None:intergenic 25.0%
! AAAATTGCTTCCTAGAAAAA+AGG + chr8_1:22410246-22410265 None:intergenic 25.0%
! GATGAAAGAAACAAAGAAAT+GGG + chr8_1:22410321-22410340 None:intergenic 25.0%
! AGGAACAAAAATTCTTAGAA+GGG + chr8_1:22410360-22410379 None:intergenic 25.0%
! AAGGAACAAAAATTCTTAGA+AGG + chr8_1:22410361-22410380 None:intergenic 25.0%
! TTTAAACCTTGTAAGGAAAA+GGG + chr8_1:22410483-22410502 None:intergenic 25.0%
! ATTTAAACCTTGTAAGGAAA+AGG + chr8_1:22410484-22410503 None:intergenic 25.0%
! AACACAATTTAAACCTTGTA+AGG + chr8_1:22410490-22410509 None:intergenic 25.0%
!! TAAATTGTGTTTTTCCTTCT+TGG - chr8_1:22410499-22410518 Msa1185340:intron 25.0%
! TCACAACAACAACAAAAATT+AGG + chr8_1:22410605-22410624 None:intergenic 25.0%
! AAAAGAAAAAAAATGGTGAG+AGG - chr8_1:22410641-22410660 Msa1185340:intron 25.0%
!! TTTAGAGTTTGTTTACTCTA+TGG - chr8_1:22410931-22410950 Msa1185340:intron 25.0%
! GTGTAAAGATATGTTAGTTA+AGG + chr8_1:22411117-22411136 None:intergenic 25.0%
!!! ACGGTCTAATTTTTTATATG+AGG - chr8_1:22411365-22411384 Msa1185340:intron 25.0%
! AATTTCAGTCAATAAGAAAG+AGG - chr8_1:22411491-22411510 Msa1185340:intron 25.0%
! ATTTCAGTCAATAAGAAAGA+GGG - chr8_1:22411492-22411511 Msa1185340:intron 25.0%
! ACTCAACAAAACTTTATATG+AGG - chr8_1:22411627-22411646 Msa1185340:intron 25.0%
! AATTTCAGTCAATAAGAAAG+AGG - chr8_1:22411491-22411510 Msa1185340:intron 25.0%
! ATTTCAGTCAATAAGAAAGA+GGG - chr8_1:22411492-22411511 Msa1185340:intron 25.0%
!!! TTAACTTTTGATTTTGGTCT+TGG + chr8_1:22411944-22411963 None:intergenic 25.0%
!!! ATGCTGTTAACTTTTGATTT+TGG + chr8_1:22411950-22411969 None:intergenic 25.0%
! AAATATTCACAAGATATTGC+AGG + chr8_1:22412303-22412322 None:intergenic 25.0%
!!! GGTTTAGTTTTTCTTTAGTA+AGG - chr8_1:22412351-22412370 Msa1185340:intron 25.0%
!! AAAGATCTCTAATGATTTTG+TGG - chr8_1:22412492-22412511 Msa1185340:intron 25.0%
!!! TGATCACAATTTTTTTAGCA+TGG - chr8_1:22412541-22412560 Msa1185340:intron 25.0%
! TTTATGTAAAAGATAGCCTT+GGG + chr8_1:22412594-22412613 None:intergenic 25.0%
!! TTTTATGTAAAAGATAGCCT+TGG + chr8_1:22412595-22412614 None:intergenic 25.0%
! CTGAAATTAATGATTGAATC+TGG + chr8_1:22412941-22412960 None:intergenic 25.0%
! TGGTGTTTAATTGAATCATT+AGG - chr8_1:22412974-22412993 Msa1185340:intron 25.0%
! AATCATTAGGTTAGGAAATT+CGG - chr8_1:22412987-22413006 Msa1185340:intron 25.0%
! ATGAGATATGATATGAGAAA+CGG + chr8_1:22413076-22413095 None:intergenic 25.0%
!!! GACTGTTATTTCTTTCTTTT+TGG + chr8_1:22413116-22413135 None:intergenic 25.0%
! GAAAAAACATGAGAAATTGT+TGG + chr8_1:22413138-22413157 None:intergenic 25.0%
!! AAAGCATCATCTTAAAACAT+GGG + chr8_1:22413217-22413236 None:intergenic 25.0%
!! TAAAGCATCATCTTAAAACA+TGG + chr8_1:22413218-22413237 None:intergenic 25.0%
! CATCATGATAGAAATGAAAT+TGG + chr8_1:22413472-22413491 None:intergenic 25.0%
! CAATTTCATTTCTATCATGA+TGG - chr8_1:22413470-22413489 Msa1185340:intron 25.0%
!! GCATTATACTTTTCTTTCAA+AGG + chr8_1:22414037-22414056 None:intergenic 25.0%
! AAATCCAAAGATATATCTTC+CGG - chr8_1:22414071-22414090 Msa1185340:intron 25.0%
!!! TTTGAATTGTGTGTTTTGTT+CGG + chr8_1:22414236-22414255 None:intergenic 25.0%
! AAAAGGTCTAAATATTCTCT+TGG + chr8_1:22414329-22414348 None:intergenic 25.0%
!!! TTGACATTTTAAGAGGAATT+TGG + chr8_1:22414368-22414387 None:intergenic 25.0%
!! TTTTCTTTCAGGATTTGATT+TGG + chr8_1:22414740-22414759 None:intergenic 25.0%
!! GACATTGAAATTTTTCTTTC+AGG + chr8_1:22414751-22414770 None:intergenic 25.0%
! TTACTTTGATCCATTACATA+TGG - chr8_1:22414988-22415007 Msa1185340:intron 25.0%
! ATACTTCTTGTTGGAAAATA+CGG - chr8_1:22415050-22415069 Msa1185340:intron 25.0%
!! ATTCAATGTCCTAAGATTTT+GGG + chr8_1:22415140-22415159 None:intergenic 25.0%
!! AATTCAATGTCCTAAGATTT+TGG + chr8_1:22415141-22415160 None:intergenic 25.0%
!! TTATTTAAAACTGCACTTGA+AGG + chr8_1:22415329-22415348 None:intergenic 25.0%
!!! TTTAGGTTTTCTTGTTTGTT+TGG + chr8_1:22415465-22415484 None:intergenic 25.0%
! TTCAAAAGCAAGAAAAAAGT+TGG + chr8_1:22415494-22415513 None:intergenic 25.0%
! AGAAATGTGCTTTATCTATT+GGG + chr8_1:22415663-22415682 None:intergenic 25.0%
! AAGAAATGTGCTTTATCTAT+TGG + chr8_1:22415664-22415683 None:intergenic 25.0%
!! AAATTTCTGGAGGAAAAATA+AGG + chr8_1:22415753-22415772 None:intergenic 25.0%
! GATACTATCTACTGTAATTA+GGG + chr8_1:22415894-22415913 None:intergenic 25.0%
! GGAGATTATATTATAGAGTA+AGG + chr8_1:22415974-22415993 None:intergenic 25.0%
! AAAAATGAGAAAACACACAA+GGG + chr8_1:22416158-22416177 None:intergenic 25.0%
! AAAAAATGAGAAAACACACA+AGG + chr8_1:22416159-22416178 None:intergenic 25.0%
AAAGTAGTGATCCATAATTG+AGG + chr8_1:22409996-22410015 None:intergenic 30.0%
! CAATTATGGATCACTACTTT+TGG - chr8_1:22409996-22410015 Msa1185340:CDS 30.0%
!! ATTATGGATCACTACTTTTG+GGG - chr8_1:22409998-22410017 Msa1185340:CDS 30.0%
CTAGAATAGGAAAATAAGGA+AGG + chr8_1:22410080-22410099 None:intergenic 30.0%
!!! CTTCCTTATTTTCCTATTCT+AGG - chr8_1:22410078-22410097 Msa1185340:intron 30.0%
GCAAGAAAAGCAATTTCAAA+AGG + chr8_1:22410161-22410180 None:intergenic 30.0%
!! TTTGAAATTGCTTTTCTTGC+TGG - chr8_1:22410161-22410180 Msa1185340:intron 30.0%
GGATGAAAGAAACAAAGAAA+TGG + chr8_1:22410322-22410341 None:intergenic 30.0%
AACAAAAATTCTTAGAAGGG+TGG + chr8_1:22410357-22410376 None:intergenic 30.0%
TTACCACCCAATAAAATCAA+AGG + chr8_1:22410380-22410399 None:intergenic 30.0%
AAAAAAAGTTCTCACCAAGA+AGG + chr8_1:22410516-22410535 None:intergenic 30.0%
! TTATTGTTTTCTCACCAAGA+GGG - chr8_1:22410786-22410805 Msa1185340:intron 30.0%
!! TTTATGAATTTGCTAGCTCT+AGG - chr8_1:22410813-22410832 Msa1185340:intron 30.0%
ATGTGTGATTATATTGCATC+TGG - chr8_1:22410881-22410900 Msa1185340:intron 30.0%
AGAAGTGAGAGAATGAAAAT+AGG - chr8_1:22411008-22411027 Msa1185340:intron 30.0%
TCCACATTAACTTTACTCAT+GGG + chr8_1:22411421-22411440 None:intergenic 30.0%
ATCCACATTAACTTTACTCA+TGG + chr8_1:22411422-22411441 None:intergenic 30.0%
TTTCAGTCAATAAGAAAGAG+GGG - chr8_1:22411493-22411512 Msa1185340:intron 30.0%
TCCACATTAACTTTACTCAT+GGG + chr8_1:22411421-22411440 None:intergenic 30.0%
ATCCACATTAACTTTACTCA+TGG + chr8_1:22411422-22411441 None:intergenic 30.0%
TTTCAGTCAATAAGAAAGAG+GGG - chr8_1:22411493-22411512 Msa1185340:intron 30.0%
GTAACTTAATGTTATGGTTG+AGG + chr8_1:22412050-22412069 None:intergenic 30.0%
GAGATCATACACAGTTAATT+TGG - chr8_1:22412167-22412186 Msa1185340:intron 30.0%
ATTATTACCTGCACTACATA+AGG - chr8_1:22412258-22412277 Msa1185340:intron 30.0%
TCCTATAACATATATGATGC+AGG - chr8_1:22412454-22412473 Msa1185340:intron 30.0%
CCTATAACATATATGATGCA+GGG - chr8_1:22412455-22412474 Msa1185340:intron 30.0%
!!! ATTTCAGTTTTGGGACTTAT+TGG - chr8_1:22412954-22412973 Msa1185340:intron 30.0%
TGAGATATGATATGAGAAAC+GGG + chr8_1:22413075-22413094 None:intergenic 30.0%
AAGCATCATCTTAAAACATG+GGG + chr8_1:22413216-22413235 None:intergenic 30.0%
CAAGAGGATATGAATGAAAT+TGG + chr8_1:22413404-22413423 None:intergenic 30.0%
TGTACAAAAAAAAAGGCAAG+AGG + chr8_1:22413420-22413439 None:intergenic 30.0%
AAGGGATAGACATACAAATA+AGG + chr8_1:22413502-22413521 None:intergenic 30.0%
TCTATCCCTTTACAATAAAC+CGG - chr8_1:22413512-22413531 Msa1185340:intron 30.0%
!! TCGATTTTGACAATTTCCTA+AGG - chr8_1:22413719-22413738 Msa1185340:intron 30.0%
! TATTAATTTGAGATGGGAGA+AGG - chr8_1:22413757-22413776 Msa1185340:intron 30.0%
AGTTAAATGTGAAAGCTTGT+AGG - chr8_1:22413797-22413816 Msa1185340:intron 30.0%
AAAAAGAGAGATCACATTTC+TGG - chr8_1:22414109-22414128 Msa1185340:intron 30.0%
!! TTTGGTATTCGATTTTCAAG+TGG + chr8_1:22414157-22414176 None:intergenic 30.0%
!!! AGATATTGATTTTGTTGGGA+GGG + chr8_1:22414180-22414199 None:intergenic 30.0%
!!! TAGATATTGATTTTGTTGGG+AGG + chr8_1:22414181-22414200 None:intergenic 30.0%
TTCTCAGAAACATAACTAGA+GGG + chr8_1:22414281-22414300 None:intergenic 30.0%
ATTCTCAGAAACATAACTAG+AGG + chr8_1:22414282-22414301 None:intergenic 30.0%
! GAGAATATTTAGACCTTTTG+CGG - chr8_1:22414330-22414349 Msa1185340:intron 30.0%
!! AGACTAGTTGACATTTTAAG+AGG + chr8_1:22414375-22414394 None:intergenic 30.0%
! CTTAAAATGTCAACTAGTCT+CGG - chr8_1:22414375-22414394 Msa1185340:intron 30.0%
TACTTAGACCTATAGACAAA+GGG - chr8_1:22414659-22414678 Msa1185340:intron 30.0%
!! GTTTTATTCCCTTTGTCTAT+AGG + chr8_1:22414670-22414689 None:intergenic 30.0%
! TATACTCAATGTCCTTTTAG+TGG + chr8_1:22414855-22414874 None:intergenic 30.0%
TAGACTCTAATACTTCTTGT+TGG - chr8_1:22415041-22415060 Msa1185340:intron 30.0%
!!! CACATTTTAACTCCAAAAAG+AGG - chr8_1:22415226-22415245 Msa1185340:intron 30.0%
TGTTTGTCTTAATCACTATG+AGG + chr8_1:22415383-22415402 None:intergenic 30.0%
GGTGTAGAAAGAAAATAGTT+TGG + chr8_1:22415428-22415447 None:intergenic 30.0%
CAAATATTCATATGCAGTTG+AGG - chr8_1:22415536-22415555 Msa1185340:CDS 30.0%
!!! TTTTGGAAGGGTGTTTAAAT+TGG + chr8_1:22415587-22415606 None:intergenic 30.0%
GTTAGAAAATTAGGAGTCTT+TGG + chr8_1:22415779-22415798 None:intergenic 30.0%
GGATACTATCTACTGTAATT+AGG + chr8_1:22415895-22415914 None:intergenic 30.0%
AGTATCCTTTAGATGCAAAT+TGG - chr8_1:22415908-22415927 Msa1185340:intron 30.0%
GTATCCTTTAGATGCAAATT+GGG - chr8_1:22415909-22415928 Msa1185340:intron 30.0%
CTCTGAATTAATAGTCACAT+TGG - chr8_1:22416222-22416241 Msa1185340:five_prime_UTR 30.0%
TATTAATCCTGGTATGATTG+CGG + chr8_1:22416286-22416305 None:intergenic 30.0%
!! GTATTTTCAACTGATTCAGA+TGG + chr8_1:22416320-22416339 None:intergenic 30.0%
TCAAGGAAAAGGATTGGATT+TGG + chr8_1:22409968-22409987 None:intergenic 35.0%
GTAAGTTCAAGGAAAAGGAT+TGG + chr8_1:22409974-22409993 None:intergenic 35.0%
TTGAGGTAAGTTCAAGGAAA+AGG + chr8_1:22409979-22409998 None:intergenic 35.0%
CCATAATTGAGGTAAGTTCA+AGG + chr8_1:22409985-22410004 None:intergenic 35.0%
CCTTGAACTTACCTCAATTA+TGG - chr8_1:22409982-22410001 Msa1185340:CDS 35.0%
!! TTATGGATCACTACTTTTGG+GGG - chr8_1:22409999-22410018 Msa1185340:CDS 35.0%
TAGGAAAATAAGGAAGGGAA+GGG + chr8_1:22410074-22410093 None:intergenic 35.0%
ATAGGAAAATAAGGAAGGGA+AGG + chr8_1:22410075-22410094 None:intergenic 35.0%
GTGCCTAGAATAGGAAAATA+AGG + chr8_1:22410084-22410103 None:intergenic 35.0%
!!! GTGTTTAGACCCTTTTTTCT+AGG - chr8_1:22410233-22410252 Msa1185340:intron 35.0%
!! GTTCCTTTGATTTTATTGGG+TGG - chr8_1:22410374-22410393 Msa1185340:intron 35.0%
! TTTCATCCCTTTTCCTTACA+AGG - chr8_1:22410474-22410493 Msa1185340:intron 35.0%
ACATTCTCAAAGAGGAGAAA+TGG - chr8_1:22410710-22410729 Msa1185340:intron 35.0%
!! GAGAAATGGTTTGTTGAAGA+AGG - chr8_1:22410724-22410743 Msa1185340:intron 35.0%
ACACAACACTGATAACTCAA+AGG + chr8_1:22410750-22410769 None:intergenic 35.0%
! CTTATTGTTTTCTCACCAAG+AGG - chr8_1:22410785-22410804 Msa1185340:intron 35.0%
ACCCATGAGTAAAGTTAATG+TGG - chr8_1:22411417-22411436 Msa1185340:intron 35.0%
TTCAGTCAATAAGAAAGAGG+GGG - chr8_1:22411494-22411513 Msa1185340:intron 35.0%
! TAGTGTTTATGTCGGTTATC+AGG - chr8_1:22411570-22411589 Msa1185340:intron 35.0%
! AGTGTTTATGTCGGTTATCA+GGG - chr8_1:22411571-22411590 Msa1185340:intron 35.0%
ACCCATGAGTAAAGTTAATG+TGG - chr8_1:22411417-22411436 Msa1185340:intron 35.0%
TTCAGTCAATAAGAAAGAGG+GGG - chr8_1:22411494-22411513 Msa1185340:intron 35.0%
! TAGTGTTTATGTCGGTTATC+AGG - chr8_1:22411570-22411589 Msa1185340:intron 35.0%
! AGTGTTTATGTCGGTTATCA+GGG - chr8_1:22411571-22411590 Msa1185340:intron 35.0%
! AATGTTATGGTTGAGGTACT+AGG + chr8_1:22412043-22412062 None:intergenic 35.0%
CATCACATCACATGTAGTTA+CGG - chr8_1:22412097-22412116 Msa1185340:intron 35.0%
! CATACACAGTTAATTTGGAC+AGG - chr8_1:22412172-22412191 Msa1185340:intron 35.0%
TTCACAAGATATTGCAGGAT+AGG + chr8_1:22412298-22412317 None:intergenic 35.0%
CCCTGCATCATATATGTTAT+AGG + chr8_1:22412458-22412477 None:intergenic 35.0%
!! TTTTTAGCATGGCATGATCA+AGG - chr8_1:22412552-22412571 Msa1185340:intron 35.0%
TCACAAACAATAATCTCCCA+AGG - chr8_1:22412575-22412594 Msa1185340:intron 35.0%
AGTATGAACTTGCATCAAAG+TGG - chr8_1:22412619-22412638 Msa1185340:intron 35.0%
CGATCTTGACAACAATGATT+GGG + chr8_1:22412655-22412674 None:intergenic 35.0%
ACGATCTTGACAACAATGAT+TGG + chr8_1:22412656-22412675 None:intergenic 35.0%
GAGATATGATATGAGAAACG+GGG + chr8_1:22413074-22413093 None:intergenic 35.0%
!!! GATGAAGACACATTTTGGTT+GGG + chr8_1:22413160-22413179 None:intergenic 35.0%
!! AGATGAAGACACATTTTGGT+TGG + chr8_1:22413161-22413180 None:intergenic 35.0%
! GGATAGATGAAGACACATTT+TGG + chr8_1:22413165-22413184 None:intergenic 35.0%
AGCATCATCTTAAAACATGG+GGG + chr8_1:22413215-22413234 None:intergenic 35.0%
CAAATGAGCGGGAAAATATT+AGG + chr8_1:22413323-22413342 None:intergenic 35.0%
AACCTAATACAGCAAATGAG+CGG + chr8_1:22413335-22413354 None:intergenic 35.0%
!!! GTGCGATGCATTTTTTTAGA+TGG + chr8_1:22413382-22413401 None:intergenic 35.0%
! ATAGAAAAAGCGTAGATCGT+AGG + chr8_1:22413675-22413694 None:intergenic 35.0%
TATACCCTAACGATCTTTAG+TGG - chr8_1:22413692-22413711 Msa1185340:intron 35.0%
ATACCCTAACGATCTTTAGT+GGG - chr8_1:22413693-22413712 Msa1185340:intron 35.0%
GACAATTTCCTAAGGTAGTT+AGG - chr8_1:22413727-22413746 Msa1185340:intron 35.0%
! ATTTTGTGCCTAACTACCTT+AGG + chr8_1:22413738-22413757 None:intergenic 35.0%
GTAGGACTACATAGTATAGT+TGG - chr8_1:22413815-22413834 Msa1185340:intron 35.0%
TGATCAAACTTAGATGCTTG+TGG - chr8_1:22413850-22413869 Msa1185340:intron 35.0%
GATCAAACTTAGATGCTTGT+GGG - chr8_1:22413851-22413870 Msa1185340:intron 35.0%
TGTCTAGATCAAGGTTCAAA+CGG - chr8_1:22413906-22413925 Msa1185340:intron 35.0%
CTTGAAGAGTAGTTTAAGGA+TGG - chr8_1:22413952-22413971 Msa1185340:intron 35.0%
TTCTCCGGAAGATATATCTT+TGG + chr8_1:22414078-22414097 None:intergenic 35.0%
TCTCAGAAACATAACTAGAG+GGG + chr8_1:22414280-22414299 None:intergenic 35.0%
! GACTAATTTTGTACCGCAAA+AGG + chr8_1:22414346-22414365 None:intergenic 35.0%
TCATTGTTTGGTCGTCTATT+TGG + chr8_1:22414614-22414633 None:intergenic 35.0%
GGTCTAAGTAGAACATTTGT+GGG + chr8_1:22414649-22414668 None:intergenic 35.0%
AGGTCTAAGTAGAACATTTG+TGG + chr8_1:22414650-22414669 None:intergenic 35.0%
CTACTTAGACCTATAGACAA+AGG - chr8_1:22414658-22414677 Msa1185340:intron 35.0%
!! ATTTGGTGTGTTGGATTGTT+GGG + chr8_1:22414723-22414742 None:intergenic 35.0%
!!! AAAGTTTTAGGGTTGTCTAG+AGG - chr8_1:22414773-22414792 Msa1185340:intron 35.0%
GATCAAGACAATTGAGAGAT+TGG - chr8_1:22414820-22414839 Msa1185340:intron 35.0%
AATGCATTCATGCTTGATGA+TGG - chr8_1:22414908-22414927 Msa1185340:intron 35.0%
GGATCAAAGTAAAGTGATGT+GGG + chr8_1:22414980-22414999 None:intergenic 35.0%
TGGATCAAAGTAAAGTGATG+TGG + chr8_1:22414981-22415000 None:intergenic 35.0%
!! AGTCTAGTTTGACTTGATGA+AGG + chr8_1:22415027-22415046 None:intergenic 35.0%
GCAATAAGAGACAAATGATC+AGG - chr8_1:22415083-22415102 Msa1185340:intron 35.0%
AAATGATCAGGAACACTAAG+AGG - chr8_1:22415095-22415114 Msa1185340:intron 35.0%
TGACCTAAAAGCTAAACTCT+TGG - chr8_1:22415282-22415301 Msa1185340:intron 35.0%
!!! TGTCCAAGAGTTTAGCTTTT+AGG + chr8_1:22415288-22415307 None:intergenic 35.0%
AAAACTGCACTTGAAGGAAA+TGG + chr8_1:22415323-22415342 None:intergenic 35.0%
!! TTTTCTTGTTTGTTTGGAGG+AGG + chr8_1:22415459-22415478 None:intergenic 35.0%
!! AGGTTTTCTTGTTTGTTTGG+AGG + chr8_1:22415462-22415481 None:intergenic 35.0%
CTTGGAGGCTTATTGAATAA+AGG + chr8_1:22415629-22415648 None:intergenic 35.0%
! TTATCTATTGGGAGGTGTAA+GGG + chr8_1:22415652-22415671 None:intergenic 35.0%
! TTTATCTATTGGGAGGTGTA+AGG + chr8_1:22415653-22415672 None:intergenic 35.0%
AATGTGCTTTATCTATTGGG+AGG + chr8_1:22415660-22415679 None:intergenic 35.0%
! TCTTTGGTGTAAATTTCTGG+AGG + chr8_1:22415763-22415782 None:intergenic 35.0%
! GAGTCTTTGGTGTAAATTTC+TGG + chr8_1:22415766-22415785 None:intergenic 35.0%
CAATCCCAATTTGCATCTAA+AGG + chr8_1:22415916-22415935 None:intergenic 35.0%
! TTTTCAATCTCTCGAGTCAT+TGG + chr8_1:22415944-22415963 None:intergenic 35.0%
TAAAGGGTTGTGCCTAGAAT+AGG + chr8_1:22410093-22410112 None:intergenic 40.0%
GGAACAGATTTGCACCAAAT+TGG + chr8_1:22410139-22410158 None:intergenic 40.0%
GAAGGGTGGTTGAAATATGA+AGG + chr8_1:22410343-22410362 None:intergenic 40.0%
GTATAGAGAACGCAACAAGT+AGG - chr8_1:22410681-22410700 Msa1185340:intron 40.0%
GGCAAGTAACATTCTCAAAG+AGG - chr8_1:22410702-22410721 Msa1185340:intron 40.0%
AATTCATAAAGCCTCCCTCT+TGG + chr8_1:22410803-22410822 None:intergenic 40.0%
TAAACACTAGTCACGAGAAG+AGG + chr8_1:22411559-22411578 None:intergenic 40.0%
CTCGTGACTAGTGTTTATGT+CGG - chr8_1:22411562-22411581 Msa1185340:intron 40.0%
TAAACACTAGTCACGAGAAG+AGG + chr8_1:22411559-22411578 None:intergenic 40.0%
CTCGTGACTAGTGTTTATGT+CGG - chr8_1:22411562-22411581 Msa1185340:intron 40.0%
AAGTCTTCCTTATGTAGTGC+AGG + chr8_1:22412268-22412287 None:intergenic 40.0%
ACAAGATATTGCAGGATAGG+AGG + chr8_1:22412295-22412314 None:intergenic 40.0%
TCGTAAGATCGTACGATCTT+GGG + chr8_1:22412688-22412707 None:intergenic 40.0%
!! TGGCCTTTAGAGTGGAAAAT+GGG + chr8_1:22412921-22412940 None:intergenic 40.0%
! ATTGAATCTGGCCTTTAGAG+TGG + chr8_1:22412929-22412948 None:intergenic 40.0%
ATATGATATGAGAAACGGGG+AGG + chr8_1:22413071-22413090 None:intergenic 40.0%
ACCTAATACAGCAAATGAGC+GGG + chr8_1:22413334-22413353 None:intergenic 40.0%
GATCCCACTAAAGATCGTTA+GGG + chr8_1:22413699-22413718 None:intergenic 40.0%
AGATCCCACTAAAGATCGTT+AGG + chr8_1:22413700-22413719 None:intergenic 40.0%
TTGCATCAACCCACATTTGA+TGG + chr8_1:22413878-22413897 None:intergenic 40.0%
GTCTAGATCAAGGTTCAAAC+GGG - chr8_1:22413907-22413926 Msa1185340:intron 40.0%
TCTAGATCAAGGTTCAAACG+GGG - chr8_1:22413908-22413927 Msa1185340:intron 40.0%
! TTGATTTTGTTGGGAGGGTT+TGG + chr8_1:22414175-22414194 None:intergenic 40.0%
!! TAACTAGAGGGGAGTGTTAA+CGG + chr8_1:22414269-22414288 None:intergenic 40.0%
!! GATTTGGTGTGTTGGATTGT+TGG + chr8_1:22414724-22414743 None:intergenic 40.0%
!! CAGGATTTGATTTGGTGTGT+TGG + chr8_1:22414732-22414751 None:intergenic 40.0%
TGGATCACAACTCCACTAAA+AGG - chr8_1:22414840-22414859 Msa1185340:intron 40.0%
GATCCATTACATATGGATCC+AGG - chr8_1:22414995-22415014 Msa1185340:intron 40.0%
AAGCCTGGATCCATATGTAA+TGG + chr8_1:22415001-22415020 None:intergenic 40.0%
CTTCTTGTTGGAAAATACGG+AGG - chr8_1:22415053-22415072 Msa1185340:intron 40.0%
ACATCTCCACCCAAAATCTT+AGG - chr8_1:22415128-22415147 Msa1185340:intron 40.0%
! CAATGTCCTAAGATTTTGGG+TGG + chr8_1:22415137-22415156 None:intergenic 40.0%
! GATGATTTCTCGCCTCTTTT+TGG + chr8_1:22415241-22415260 None:intergenic 40.0%
AGAGGCGAGAAATCATCATT+CGG - chr8_1:22415244-22415263 Msa1185340:intron 40.0%
ACCCTTCCAAAATGACACTA+AGG - chr8_1:22415595-22415614 Msa1185340:CDS 40.0%
!!! CCCTTAGTGTCATTTTGGAA+GGG + chr8_1:22415599-22415618 None:intergenic 40.0%
CCCTTCCAAAATGACACTAA+GGG - chr8_1:22415596-22415615 Msa1185340:CDS 40.0%
!!! ATGTGCCCTTAGTGTCATTT+TGG + chr8_1:22415604-22415623 None:intergenic 40.0%
TCAAGAATTGTGAGTCTGGT+AGG + chr8_1:22415822-22415841 None:intergenic 40.0%
TCTGTCAAGAATTGTGAGTC+TGG + chr8_1:22415826-22415845 None:intergenic 40.0%
! TGTTGGAGTGCTATTAATCC+TGG + chr8_1:22416297-22416316 None:intergenic 40.0%
! TCAACTGATTCAGATGGTGT+TGG + chr8_1:22416314-22416333 None:intergenic 40.0%
! TTGTTTTCTCACCAAGAGGG+AGG - chr8_1:22410789-22410808 Msa1185340:intron 45.0%
ACTATCACAGCGACTCACTT+TGG - chr8_1:22411135-22411154 Msa1185340:intron 45.0%
CTCGTAAGATCGTACGATCT+TGG + chr8_1:22412689-22412708 None:intergenic 45.0%
TCATGATGCCTCCACCAATT+TGG - chr8_1:22412709-22412728 Msa1185340:intron 45.0%
!!! TGCACTTTTTTTTCCGCGTC+AGG - chr8_1:22412802-22412821 Msa1185340:intron 45.0%
!!! GCACTTTTTTTTCCGCGTCA+GGG - chr8_1:22412803-22412822 Msa1185340:intron 45.0%
!!! TTTTTTTTCCGCGTCAGGGA+AGG - chr8_1:22412807-22412826 Msa1185340:intron 45.0%
TCGGATTATCAGACTGTAGC+CGG + chr8_1:22412841-22412860 None:intergenic 45.0%
TACAGTCTGATAATCCGACC+CGG - chr8_1:22412843-22412862 Msa1185340:intron 45.0%
AGTTCCGTGGTCAAAAGTTG+CGG + chr8_1:22412876-22412895 None:intergenic 45.0%
! GTGGAAAATGGGTCGATTTC+CGG + chr8_1:22412910-22412929 None:intergenic 45.0%
! CGACCCATTTTCCACTCTAA+AGG - chr8_1:22412915-22412934 Msa1185340:intron 45.0%
!! CTGGCCTTTAGAGTGGAAAA+TGG + chr8_1:22412922-22412941 None:intergenic 45.0%
TCTTAAAACATGGGGGTTGC+AGG + chr8_1:22413208-22413227 None:intergenic 45.0%
!! TCCCGCTCATTTGCTGTATT+AGG - chr8_1:22413330-22413349 Msa1185340:intron 45.0%
!! CCGCACCGGTTTATTGTAAA+GGG + chr8_1:22413520-22413539 None:intergenic 45.0%
CCCTTTACAATAAACCGGTG+CGG - chr8_1:22413517-22413536 Msa1185340:intron 45.0%
!! TCCGCACCGGTTTATTGTAA+AGG + chr8_1:22413521-22413540 None:intergenic 45.0%
CTTGTGGGACCATCAAATGT+GGG - chr8_1:22413866-22413885 Msa1185340:intron 45.0%
!! CAAATGTGGGTTGATGCAAG+AGG - chr8_1:22413879-22413898 Msa1185340:intron 45.0%
AGAGGTCGATGTCTAGATCA+AGG - chr8_1:22413897-22413916 Msa1185340:intron 45.0%
AAACGGGGCTTGAACTTGAT+CGG - chr8_1:22413923-22413942 Msa1185340:intron 45.0%
GTTTAAGGATGGAGAGAGCA+AGG - chr8_1:22413963-22413982 Msa1185340:intron 45.0%
AATGGTCCTCTACCTCAAGT+TGG - chr8_1:22414209-22414228 Msa1185340:intron 45.0%
!! GTTTTGTTCGGACCAACTTG+AGG + chr8_1:22414224-22414243 None:intergenic 45.0%
ACTTGATGAAGGAGAAAGCC+TGG + chr8_1:22415016-22415035 None:intergenic 45.0%
! TGTTTGGAGGAGGAAGCTTT+TGG + chr8_1:22415449-22415468 None:intergenic 45.0%
!!! GCCCTTAGTGTCATTTTGGA+AGG + chr8_1:22415600-22415619 None:intergenic 45.0%
TTGTGAGTCTGGTAGGAAAG+TGG + chr8_1:22415815-22415834 None:intergenic 45.0%
CGGTATCGTTCAATCGTTTC+TGG + chr8_1:22416266-22416285 None:intergenic 45.0%
AACGATACCGCAATCATACC+AGG - chr8_1:22416276-22416295 Msa1185340:five_prime_UTR 45.0%
!! GATATAATATATATAATAAA+AGG + chr8_1:22411297-22411316 None:intergenic 5.0%
!!! TATTTTTTTTATTTTATGAA+AGG - chr8_1:22413584-22413603 Msa1185340:intron 5.0%
!!! TAAAATTTTAAAACTAAATT+TGG + chr8_1:22414536-22414555 None:intergenic 5.0%
!!! TTAATTTTTTTTTTTTTTTG+TGG + chr8_1:22415688-22415707 None:intergenic 5.0%
ATCAGTGTTGTGTGACGCTG+AGG - chr8_1:22410757-22410776 Msa1185340:intron 50.0%
!! GTCACGAGAAGAGGAGTACT+AGG + chr8_1:22411550-22411569 None:intergenic 50.0%
!! GTCACGAGAAGAGGAGTACT+AGG + chr8_1:22411550-22411569 None:intergenic 50.0%
ATGCCTCCACCAATTTGGAG+CGG - chr8_1:22412714-22412733 Msa1185340:intron 50.0%
ATCTTGGACCCGCTCCAAAT+TGG + chr8_1:22412726-22412745 None:intergenic 50.0%
! ATTTGGAGCGGGTCCAAGAT+CGG - chr8_1:22412726-22412745 Msa1185340:intron 50.0%
AAAAGTTGCGGGTCGAAACC+GGG + chr8_1:22412864-22412883 None:intergenic 50.0%
CAAAAGTTGCGGGTCGAAAC+CGG + chr8_1:22412865-22412884 None:intergenic 50.0%
GTTCCGTGGTCAAAAGTTGC+GGG + chr8_1:22412875-22412894 None:intergenic 50.0%
! GCAACTTTTGACCACGGAAC+TGG - chr8_1:22412875-22412894 Msa1185340:intron 50.0%
AGAAACGGGGAGGATGTGAT+AGG + chr8_1:22413061-22413080 None:intergenic 50.0%
! GCGAGGAAGCACAAACAAGA+GGG + chr8_1:22413186-22413205 None:intergenic 50.0%
CAATAAACCGGTGCGGAACA+CGG - chr8_1:22413524-22413543 Msa1185340:intron 50.0%
AATAAACCGGTGCGGAACAC+GGG - chr8_1:22413525-22413544 Msa1185340:intron 50.0%
GCTTGTGGGACCATCAAATG+TGG - chr8_1:22413865-22413884 Msa1185340:intron 50.0%
TGGAGAGAGCAAGGTTCAAG+TGG - chr8_1:22413972-22413991 Msa1185340:intron 50.0%
TTCGGACCAACTTGAGGTAG+AGG + chr8_1:22414218-22414237 None:intergenic 50.0%
!! TAGAGGGGAGTGTTAACGGA+TGG + chr8_1:22414265-22414284 None:intergenic 50.0%
! TATTGGGAGGTGTAAGGGCT+TGG + chr8_1:22415647-22415666 None:intergenic 50.0%
! TGCCTCCACCAATTTGGAGC+GGG - chr8_1:22412715-22412734 Msa1185340:intron 55.0%
TTGGACCCGCTCCAAATTGG+TGG + chr8_1:22412723-22412742 None:intergenic 55.0%
TCCAAGATCGGAGAAGACGC+TGG - chr8_1:22412738-22412757 Msa1185340:intron 55.0%
TCCAGCGTCTTCTCCGATCT+TGG + chr8_1:22412742-22412761 None:intergenic 55.0%
! TTTTTCCGCGTCAGGGAAGG+TGG - chr8_1:22412810-22412829 Msa1185340:intron 55.0%
ACAAACCACCTTCCCTGACG+CGG + chr8_1:22412818-22412837 None:intergenic 55.0%
! GTCAGGGAAGGTGGTTTGTC+CGG - chr8_1:22412819-22412838 Msa1185340:intron 55.0%
! CGACCCGCAACTTTTGACCA+CGG - chr8_1:22412869-22412888 Msa1185340:intron 55.0%
! TGGGTCGATTTCCGGCAGAA+CGG + chr8_1:22412902-22412921 None:intergenic 55.0%
! GGCGAGGAAGCACAAACAAG+AGG + chr8_1:22413187-22413206 None:intergenic 55.0%
ATTTGACCCGTGTTCCGCAC+CGG + chr8_1:22413534-22413553 None:intergenic 55.0%
!! AGATGGGAGAAGGCATTGCG+AGG - chr8_1:22413767-22413786 Msa1185340:intron 55.0%
!! GATGGGAGAAGGCATTGCGA+GGG - chr8_1:22413768-22413787 Msa1185340:intron 55.0%
GACCCGCTCCAAATTGGTGG+AGG + chr8_1:22412720-22412739 None:intergenic 60.0%
ATCGGAGAAGACGCTGGAGC+AGG - chr8_1:22412744-22412763 Msa1185340:intron 60.0%
ACGGAACTGGTCCGTTCTGC+CGG - chr8_1:22412888-22412907 Msa1185340:intron 60.0%
AAACATGGGGGTTGCAGGCG+AGG + chr8_1:22413203-22413222 None:intergenic 60.0%
! TGGGAGGTGTAAGGGCTTGG+AGG + chr8_1:22415644-22415663 None:intergenic 60.0%
GGAGAAGACGCTGGAGCAGG+TGG - chr8_1:22412747-22412766 Msa1185340:intron 65.0%
CGCAATCCAGCGCTCTTCCG+CGG + chr8_1:22412777-22412796 None:intergenic 65.0%
!! CGCGGAAGAGCGCTGGATTG+CGG - chr8_1:22412775-22412794 Msa1185340:intron 65.0%
GTTGCGGGTCGAAACCGGGT+CGG + chr8_1:22412860-22412879 None:intergenic 65.0%
GGCAGAACGGACCAGTTCCG+TGG + chr8_1:22412889-22412908 None:intergenic 65.0%
CTGGAGCAGGTGGCGCACCG+CGG - chr8_1:22412757-22412776 Msa1185340:intron 75.0%
!! GGCGCACCGCGGAAGAGCGC+TGG - chr8_1:22412768-22412787 Msa1185340:intron 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 22409950 22416343 22409950 ID=Msa1185340;Name=Msa1185340
chr8_1 mRNA 22409950 22416343 22409950 ID=Msa1185340-mRNA-1;Parent=Msa1185340;Name=Msa1185340-mRNA-1;_AED=0.19;_eAED=0.19;_QI=255|1|1|1|0|0|3|0|89
chr8_1 exon 22409950 22410034 22409950 ID=Msa1185340-mRNA-1:exon:8298;Parent=Msa1185340-mRNA-1
chr8_1 exon 22415459 22415662 22415459 ID=Msa1185340-mRNA-1:exon:8297;Parent=Msa1185340-mRNA-1
chr8_1 exon 22416111 22416343 22416111 ID=Msa1185340-mRNA-1:exon:8296;Parent=Msa1185340-mRNA-1
chr8_1 five_prime_UTR 22416111 22416343 22416111 ID=Msa1185340-mRNA-1:five_prime_utr;Parent=Msa1185340-mRNA-1
chr8_1 five_prime_UTR 22415641 22415662 22415641 ID=Msa1185340-mRNA-1:five_prime_utr;Parent=Msa1185340-mRNA-1
chr8_1 CDS 22415459 22415640 22415459 ID=Msa1185340-mRNA-1:cds;Parent=Msa1185340-mRNA-1
chr8_1 CDS 22409950 22410034 22409950 ID=Msa1185340-mRNA-1:cds;Parent=Msa1185340-mRNA-1
Gene Sequence

>Msa1185340

ATGGTGAGAGGAAAGACACAAATGAAGCGTATAGAGAACGCAACAAGTAGGCAAGTAACATTCTCAAAGAGGAGAAATGGTTTGTTGAAGAAGGCCTTTGAGTTATCAGTGTTGTGTGACGCTGAGGTTGCTCTTATTGTTTTCTCACCAAGAGGGAGGCTTTATGAATTTGCTAGCTCTAGCATTCCAGAAACGATTGAACGATACCGCAATCATACCAGGATTAATAGCACTCCAACACCATCTGAATCAGTTGAAAATACTCAG
Protein sequence

>Msa1185340

MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASSSIPETIERYRNHTRINSTPTPSESVENTQ