Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1185760 | XP_013445014.1 | 97.647 | 170 | 4 | 0 | 1 | 170 | 1 | 170 | 1.27e-118 | 345 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1185760 | sp|O81323|LBD30_ARATH | 67.333 | 150 | 35 | 2 | 26 | 168 | 20 | 162 | 6.52e-62 | 193 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1185760 | A0A072TNF8 | 97.647 | 170 | 4 | 0 | 1 | 170 | 1 | 170 | 6.07e-119 | 345 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1185760 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1185760 | MtrunA17_Chr8g0351701 | 97.647 | 170 | 4 | 0 | 1 | 170 | 1 | 170 | 1.17e-122 | 345 |
| Msa1185760 | MtrunA17_Chr8g0351721 | 67.143 | 140 | 35 | 1 | 11 | 150 | 6 | 134 | 2.16e-62 | 191 |
| Msa1185760 | MtrunA17_Chr7g0245871 | 62.416 | 149 | 53 | 1 | 23 | 168 | 27 | 175 | 5.28e-62 | 191 |
| Msa1185760 | MtrunA17_Chr1g0184271 | 60.317 | 126 | 49 | 1 | 23 | 147 | 12 | 137 | 1.30e-52 | 167 |
| Msa1185760 | MtrunA17_Chr7g0261031 | 63.636 | 121 | 44 | 0 | 19 | 139 | 4 | 124 | 1.41e-52 | 167 |
| Msa1185760 | MtrunA17_Chr7g0260971 | 67.257 | 113 | 37 | 0 | 13 | 125 | 4 | 116 | 1.33e-51 | 164 |
| Msa1185760 | MtrunA17_Chr7g0245861 | 74.490 | 98 | 21 | 3 | 15 | 110 | 6 | 101 | 7.56e-47 | 149 |
| Msa1185760 | MtrunA17_Chr1g0184281 | 72.632 | 95 | 26 | 0 | 23 | 117 | 15 | 109 | 3.29e-46 | 150 |
| Msa1185760 | MtrunA17_Chr6g0460951 | 67.647 | 102 | 33 | 0 | 23 | 124 | 40 | 141 | 3.86e-46 | 150 |
| Msa1185760 | MtrunA17_Chr5g0435641 | 60.360 | 111 | 44 | 0 | 19 | 129 | 3 | 113 | 5.30e-45 | 146 |
| Msa1185760 | MtrunA17_Chr4g0043421 | 43.949 | 157 | 85 | 2 | 15 | 169 | 5 | 160 | 4.20e-40 | 133 |
| Msa1185760 | MtrunA17_Chr7g0227511 | 60.000 | 105 | 41 | 1 | 23 | 127 | 11 | 114 | 2.43e-39 | 131 |
| Msa1185760 | MtrunA17_Chr4g0058651 | 55.833 | 120 | 51 | 2 | 22 | 141 | 10 | 127 | 3.41e-39 | 131 |
| Msa1185760 | MtrunA17_Chr2g0311601 | 51.261 | 119 | 57 | 1 | 13 | 131 | 3 | 120 | 8.89e-39 | 129 |
| Msa1185760 | MtrunA17_Chr3g0117121 | 58.095 | 105 | 43 | 1 | 23 | 127 | 10 | 113 | 2.08e-37 | 127 |
| Msa1185760 | MtrunA17_Chr5g0437571 | 51.613 | 124 | 56 | 2 | 19 | 139 | 2 | 124 | 2.59e-37 | 126 |
| Msa1185760 | MtrunA17_Chr5g0438091 | 44.516 | 155 | 77 | 3 | 15 | 161 | 31 | 184 | 2.93e-36 | 124 |
| Msa1185760 | MtrunA17_Chr3g0106101 | 49.573 | 117 | 58 | 1 | 18 | 134 | 2 | 117 | 3.32e-36 | 123 |
| Msa1185760 | MtrunA17_Chr3g0114061 | 50.000 | 118 | 58 | 1 | 18 | 135 | 3 | 119 | 5.52e-36 | 122 |
| Msa1185760 | MtrunA17_Chr3g0115431 | 54.622 | 119 | 53 | 1 | 22 | 140 | 8 | 125 | 5.70e-36 | 124 |
| Msa1185760 | MtrunA17_Chr5g0437401 | 55.882 | 102 | 44 | 1 | 24 | 125 | 12 | 112 | 1.42e-35 | 122 |
| Msa1185760 | MtrunA17_Chr5g0402611 | 50.746 | 134 | 61 | 2 | 23 | 154 | 8 | 138 | 2.72e-35 | 125 |
| Msa1185760 | MtrunA17_Chr6g0449641 | 56.863 | 102 | 43 | 1 | 23 | 124 | 9 | 109 | 6.35e-35 | 119 |
| Msa1185760 | MtrunA17_Chr3g0129071 | 52.586 | 116 | 54 | 1 | 16 | 131 | 40 | 154 | 1.32e-34 | 121 |
| Msa1185760 | MtrunA17_Chr3g0113891 | 56.842 | 95 | 40 | 1 | 24 | 118 | 15 | 108 | 1.22e-33 | 117 |
| Msa1185760 | MtrunA17_Chr3g0097221 | 50.407 | 123 | 56 | 2 | 23 | 145 | 7 | 124 | 8.17e-33 | 118 |
| Msa1185760 | MtrunA17_Chr6g0449651 | 50.893 | 112 | 54 | 1 | 16 | 127 | 60 | 170 | 8.28e-33 | 115 |
| Msa1185760 | MtrunA17_Chr6g0460941 | 59.091 | 88 | 36 | 0 | 23 | 110 | 7 | 94 | 7.38e-32 | 110 |
| Msa1185760 | MtrunA17_Chr4g0030001 | 41.781 | 146 | 67 | 4 | 22 | 154 | 23 | 163 | 4.86e-30 | 108 |
| Msa1185760 | MtrunA17_Chr5g0432451 | 54.237 | 118 | 53 | 1 | 11 | 128 | 31 | 147 | 5.20e-29 | 106 |
| Msa1185760 | MtrunA17_Chr8g0353981 | 62.821 | 78 | 28 | 1 | 23 | 100 | 7 | 83 | 6.84e-29 | 106 |
| Msa1185760 | MtrunA17_Chr1g0200201 | 47.222 | 108 | 56 | 1 | 24 | 131 | 73 | 179 | 1.76e-28 | 105 |
| Msa1185760 | MtrunA17_Chr5g0444351 | 43.519 | 108 | 60 | 1 | 22 | 129 | 4 | 110 | 3.97e-26 | 97.1 |
| Msa1185760 | MtrunA17_Chr7g0225111 | 41.509 | 106 | 61 | 1 | 24 | 129 | 6 | 110 | 6.42e-25 | 93.2 |
| Msa1185760 | MtrunA17_Chr8g0374601 | 43.119 | 109 | 61 | 1 | 23 | 131 | 26 | 133 | 3.74e-24 | 95.1 |
| Msa1185760 | MtrunA17_Chr8g0374591 | 43.119 | 109 | 61 | 1 | 23 | 131 | 8 | 115 | 7.62e-23 | 88.2 |
| Msa1185760 | MtrunA17_Chr4g0059901 | 42.000 | 100 | 57 | 1 | 18 | 117 | 5 | 103 | 1.20e-20 | 85.5 |
| Msa1185760 | MtrunA17_Chr4g0040831 | 37.037 | 108 | 67 | 1 | 16 | 123 | 8 | 114 | 1.62e-19 | 81.3 |
| Msa1185760 | MtrunA17_Chr8g0342351 | 38.095 | 105 | 64 | 1 | 24 | 128 | 13 | 116 | 2.17e-19 | 82.4 |
| Msa1185760 | MtrunA17_Chr8g0374581 | 38.182 | 110 | 66 | 2 | 23 | 131 | 8 | 116 | 1.27e-18 | 79.7 |
| Msa1185760 | MtrunA17_Chr2g0330201 | 40.404 | 99 | 58 | 1 | 19 | 117 | 15 | 112 | 2.69e-18 | 79.7 |
| Msa1185760 | MtrunA17_Chr6g0452671 | 34.906 | 106 | 68 | 1 | 16 | 121 | 4 | 108 | 1.34e-16 | 73.6 |
| Msa1185760 | MtrunA17_Chr6g0452691 | 39.806 | 103 | 60 | 2 | 24 | 125 | 10 | 111 | 1.35e-16 | 73.2 |
| Msa1185760 | MtrunA17_Chr4g0055441 | 35.922 | 103 | 64 | 2 | 24 | 125 | 3 | 104 | 7.12e-16 | 70.9 |
| Msa1185760 | MtrunA17_Chr6g0452661 | 33.981 | 103 | 66 | 2 | 24 | 125 | 10 | 111 | 3.63e-14 | 68.2 |
| Msa1185760 | MtrunA17_Chr2g0326041 | 52.941 | 51 | 23 | 1 | 22 | 72 | 32 | 81 | 1.56e-12 | 60.1 |
| Msa1185760 | MtrunA17_Chr2g0326051 | 37.209 | 86 | 41 | 1 | 69 | 141 | 5 | 90 | 1.10e-11 | 58.9 |
| Msa1185760 | MtrunA17_Chr4g0046201 | 29.787 | 94 | 62 | 2 | 17 | 110 | 3 | 92 | 4.33e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1185760 | AT4G00220.1 | 67.333 | 150 | 35 | 2 | 26 | 168 | 20 | 162 | 6.63e-63 | 193 |
| Msa1185760 | AT2G45420.1 | 63.158 | 152 | 46 | 2 | 26 | 168 | 40 | 190 | 3.91e-62 | 192 |
| Msa1185760 | AT4G00210.1 | 58.904 | 146 | 60 | 0 | 15 | 160 | 3 | 148 | 1.67e-57 | 179 |
| Msa1185760 | AT2G45410.1 | 64.957 | 117 | 39 | 1 | 26 | 142 | 19 | 133 | 4.94e-53 | 167 |
| Msa1185760 | AT3G03760.1 | 71.963 | 107 | 30 | 0 | 23 | 129 | 51 | 157 | 4.37e-52 | 167 |
| Msa1185760 | AT2G42430.1 | 65.812 | 117 | 37 | 1 | 16 | 129 | 5 | 121 | 6.91e-52 | 166 |
| Msa1185760 | AT3G58190.1 | 63.866 | 119 | 42 | 1 | 23 | 140 | 11 | 129 | 3.57e-50 | 160 |
| Msa1185760 | AT2G42440.1 | 65.049 | 103 | 36 | 0 | 19 | 121 | 3 | 105 | 1.15e-47 | 155 |
| Msa1185760 | AT2G31310.1 | 61.404 | 114 | 43 | 1 | 18 | 131 | 2 | 114 | 5.22e-46 | 149 |
| Msa1185760 | AT5G06080.1 | 62.857 | 105 | 39 | 0 | 23 | 127 | 7 | 111 | 2.76e-45 | 147 |
| Msa1185760 | AT5G63090.4 | 52.857 | 140 | 54 | 3 | 23 | 153 | 11 | 147 | 9.64e-40 | 133 |
| Msa1185760 | AT5G63090.3 | 52.857 | 140 | 54 | 3 | 23 | 153 | 11 | 147 | 9.64e-40 | 133 |
| Msa1185760 | AT5G63090.2 | 52.857 | 140 | 54 | 3 | 23 | 153 | 11 | 147 | 9.64e-40 | 133 |
| Msa1185760 | AT5G63090.1 | 52.857 | 140 | 54 | 3 | 23 | 153 | 11 | 147 | 9.64e-40 | 133 |
| Msa1185760 | AT3G27650.1 | 57.143 | 105 | 44 | 1 | 23 | 127 | 39 | 142 | 2.44e-37 | 126 |
| Msa1185760 | AT2G30130.1 | 52.500 | 120 | 54 | 2 | 15 | 134 | 2 | 118 | 3.04e-36 | 124 |
| Msa1185760 | AT1G31320.1 | 57.609 | 92 | 38 | 1 | 19 | 110 | 9 | 99 | 2.91e-34 | 119 |
| Msa1185760 | AT5G66870.1 | 49.286 | 140 | 66 | 3 | 18 | 156 | 2 | 137 | 3.12e-34 | 122 |
| Msa1185760 | AT3G11090.1 | 43.448 | 145 | 74 | 2 | 24 | 161 | 12 | 155 | 5.28e-34 | 118 |
| Msa1185760 | AT1G16530.1 | 42.754 | 138 | 76 | 3 | 13 | 148 | 4 | 140 | 5.25e-33 | 115 |
| Msa1185760 | AT1G07900.1 | 48.598 | 107 | 54 | 1 | 22 | 128 | 32 | 137 | 2.79e-31 | 112 |
| Msa1185760 | AT2G28500.1 | 51.456 | 103 | 49 | 1 | 22 | 124 | 54 | 155 | 7.21e-31 | 112 |
| Msa1185760 | AT2G30340.1 | 44.800 | 125 | 68 | 1 | 15 | 139 | 44 | 167 | 1.13e-29 | 109 |
| Msa1185760 | AT2G30340.2 | 44.800 | 125 | 68 | 1 | 15 | 139 | 45 | 168 | 1.27e-29 | 109 |
| Msa1185760 | AT2G23660.2 | 46.610 | 118 | 62 | 1 | 20 | 137 | 2 | 118 | 1.39e-29 | 110 |
| Msa1185760 | AT2G23660.3 | 46.610 | 118 | 62 | 1 | 20 | 137 | 2 | 118 | 1.39e-29 | 110 |
| Msa1185760 | AT2G23660.1 | 46.610 | 118 | 62 | 1 | 20 | 137 | 2 | 118 | 1.39e-29 | 110 |
| Msa1185760 | AT1G65620.1 | 56.604 | 106 | 45 | 1 | 23 | 128 | 9 | 113 | 3.89e-29 | 106 |
| Msa1185760 | AT1G65620.4 | 56.604 | 106 | 45 | 1 | 23 | 128 | 9 | 113 | 3.89e-29 | 106 |
| Msa1185760 | AT1G65620.3 | 56.604 | 106 | 45 | 1 | 23 | 128 | 9 | 113 | 3.89e-29 | 106 |
| Msa1185760 | AT1G65620.5 | 56.604 | 106 | 45 | 1 | 23 | 128 | 9 | 113 | 3.89e-29 | 106 |
| Msa1185760 | AT1G65620.2 | 56.604 | 106 | 45 | 1 | 23 | 128 | 9 | 113 | 3.89e-29 | 106 |
| Msa1185760 | AT3G26660.1 | 45.631 | 103 | 55 | 1 | 24 | 126 | 6 | 107 | 8.47e-29 | 103 |
| Msa1185760 | AT3G26620.1 | 45.631 | 103 | 55 | 1 | 24 | 126 | 6 | 107 | 1.32e-28 | 102 |
| Msa1185760 | AT2G40470.2 | 52.212 | 113 | 53 | 1 | 16 | 128 | 13 | 124 | 2.64e-27 | 102 |
| Msa1185760 | AT3G50510.1 | 39.130 | 138 | 81 | 2 | 23 | 160 | 12 | 146 | 3.76e-27 | 101 |
| Msa1185760 | AT3G50510.2 | 39.130 | 138 | 81 | 2 | 23 | 160 | 12 | 146 | 3.76e-27 | 101 |
| Msa1185760 | AT2G40470.1 | 52.212 | 113 | 53 | 1 | 16 | 128 | 38 | 149 | 4.45e-27 | 102 |
| Msa1185760 | AT5G35900.1 | 34.058 | 138 | 74 | 2 | 24 | 161 | 6 | 126 | 2.15e-20 | 84.3 |
| Msa1185760 | AT3G13850.1 | 38.462 | 104 | 63 | 1 | 24 | 127 | 37 | 139 | 4.46e-19 | 82.0 |
| Msa1185760 | AT1G72980.1 | 33.600 | 125 | 82 | 1 | 18 | 142 | 8 | 131 | 1.28e-17 | 77.0 |
| Msa1185760 | AT3G47870.1 | 34.545 | 110 | 71 | 1 | 18 | 127 | 31 | 139 | 4.54e-17 | 77.4 |
| Msa1185760 | AT1G06280.1 | 42.667 | 75 | 42 | 1 | 24 | 98 | 25 | 98 | 1.58e-14 | 68.6 |
| Msa1185760 | AT4G22700.1 | 32.110 | 109 | 71 | 2 | 20 | 127 | 2 | 108 | 5.19e-14 | 67.0 |
| Msa1185760 | AT5G15060.1 | 33.333 | 87 | 55 | 2 | 11 | 95 | 5 | 90 | 1.23e-11 | 59.7 |
Find 46 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGAAGGTGTTGGTGGTTG+AGG | 0.359436 | 8_1:+23213555 | None:intergenic |
| GAAGACAAGTCATATGTATC+TGG | 0.372604 | 8_1:+23213471 | None:intergenic |
| AGGTTGAGAGATCCCGTCTT+TGG | 0.394288 | 8_1:-23217613 | Msa1185760:CDS |
| ATGGTTGAAGAAGGGGCTAA+TGG | 0.400631 | 8_1:+23213495 | None:intergenic |
| TATCTTTACTCTTCAGCAAC+AGG | 0.415923 | 8_1:-23217578 | Msa1185760:intron |
| TTTGAGAAGGAAGTGTATCC+CGG | 0.449160 | 8_1:-23217797 | Msa1185760:CDS |
| GAAGGGGCTAATGGGAGGTT+GGG | 0.449845 | 8_1:+23213504 | None:intergenic |
| CCTTACTTCGATTCGGAGCA+AGG | 0.451165 | 8_1:-23217760 | Msa1185760:CDS |
| TGCTTGAGCTTCATAACAAA+TGG | 0.458370 | 8_1:+23217636 | None:intergenic |
| TGGTTGAAGAAGGGGCTAAT+GGG | 0.458502 | 8_1:+23213496 | None:intergenic |
| AGAAGGGGCTAATGGGAGGT+TGG | 0.460316 | 8_1:+23213503 | None:intergenic |
| AAAGTTGCTACAAAATGTTC+CGG | 0.465613 | 8_1:-23217686 | Msa1185760:CDS |
| GGTTGCAGTGGTGGTGGAAA+CGG | 0.482391 | 8_1:-23217853 | Msa1185760:CDS |
| CCTTGCTCCGAATCGAAGTA+AGG | 0.493406 | 8_1:+23217760 | None:intergenic |
| GTATCTGGCATGGTTGAAGA+AGG | 0.514232 | 8_1:+23213486 | None:intergenic |
| GGTGGAAACGGCGGTGCTTG+TGG | 0.515793 | 8_1:-23217841 | Msa1185760:CDS |
| TGTGGTGGAGAAGGTGTTGG+TGG | 0.540831 | 8_1:+23213549 | None:intergenic |
| GAGGTACTTCATATGTAGCT+AGG | 0.553041 | 8_1:+23213574 | None:intergenic |
| GCATCAAGACGCTTGTGTAC+CGG | 0.555181 | 8_1:+23217667 | None:intergenic |
| ATCTGGCATGGTTGAAGAAG+GGG | 0.556029 | 8_1:+23213488 | None:intergenic |
| AACTCGGGTTGTAGTGGTAG+CGG | 0.556744 | 8_1:-23217874 | Msa1185760:CDS |
| ATGAGCAACACAACCAAAGA+CGG | 0.560188 | 8_1:+23217600 | None:intergenic |
| GGAAGTGCTTGTGGTGGAGA+AGG | 0.569660 | 8_1:+23213540 | None:intergenic |
| GCTTGTGGTGGAGAAGGTGT+TGG | 0.570988 | 8_1:+23213546 | None:intergenic |
| TATCTGGCATGGTTGAAGAA+GGG | 0.575473 | 8_1:+23213487 | None:intergenic |
| GGTAGCGGTTGCAGTGGTGG+TGG | 0.580009 | 8_1:-23217859 | Msa1185760:CDS |
| GCAGAACTCTCCTACTTACA+AGG | 0.583111 | 8_1:-23213600 | Msa1185760:CDS |
| GGCGGTGCTTGTGGCCCTTG+TGG | 0.583981 | 8_1:-23217832 | Msa1185760:CDS |
| TTGAGAAGGAAGTGTATCCC+GGG | 0.588366 | 8_1:-23217796 | Msa1185760:CDS |
| AGTATAAACTCGGGTTGTAG+TGG | 0.593369 | 8_1:-23217880 | Msa1185760:CDS |
| TTGAAGAAGGGGCTAATGGG+AGG | 0.596604 | 8_1:+23213499 | None:intergenic |
| GGTACACAAGCGTCTTGATG+CGG | 0.599993 | 8_1:-23217665 | Msa1185760:CDS |
| AGTGGTAGCGGTTGCAGTGG+TGG | 0.600087 | 8_1:-23217862 | Msa1185760:CDS |
| TCCACCACAAGCACTTCCAA+TGG | 0.600735 | 8_1:-23213535 | Msa1185760:CDS |
| AGCTAGGTGGCCTTGTAAGT+AGG | 0.602023 | 8_1:+23213590 | None:intergenic |
| AAAACTTGCACGCGCCACAA+GGG | 0.606887 | 8_1:+23217818 | None:intergenic |
| TTTGTTATGAAGCTCAAGCA+AGG | 0.608232 | 8_1:-23217633 | Msa1185760:CDS |
| TTTAAGATGAGTATAAACTC+GGG | 0.613217 | 8_1:-23217889 | None:intergenic |
| GAGACCATTGGAAGTGCTTG+TGG | 0.614748 | 8_1:+23213531 | None:intergenic |
| TGAGCAACACAACCAAAGAC+GGG | 0.618298 | 8_1:+23217601 | None:intergenic |
| CAAGTCATATGTATCTGGCA+TGG | 0.622594 | 8_1:+23213476 | None:intergenic |
| TGCAGTGGTGGTGGAAACGG+CGG | 0.622820 | 8_1:-23217850 | Msa1185760:CDS |
| TGTAGTGGTAGCGGTTGCAG+TGG | 0.624077 | 8_1:-23217865 | Msa1185760:CDS |
| AGGTTGGGTAGTGAGACCAT+TGG | 0.647997 | 8_1:+23213519 | None:intergenic |
| ACCATTGGAAGTGCTTGTGG+TGG | 0.661636 | 8_1:+23213534 | None:intergenic |
| GTACTTCATATGTAGCTAGG+TGG | 0.723309 | 8_1:+23213577 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTATTTTGAAGAT+GGG | + | chr8_1:23214454-23214473 | None:intergenic | 10.0% |
| !!! | ATTAAGTAAAAGATTTTTTA+TGG | - | chr8_1:23214561-23214580 | Msa1185760:intron | 10.0% |
| !!! | TACTTATTTTCTTTAAATTA+AGG | + | chr8_1:23215035-23215054 | None:intergenic | 10.0% |
| !! | TTTAAAAAATATAACAAGAT+GGG | + | chr8_1:23215086-23215105 | None:intergenic | 10.0% |
| !!! | TTTTAAAAAATATAACAAGA+TGG | + | chr8_1:23215087-23215106 | None:intergenic | 10.0% |
| !!! | TGTTATATTTTTTAAAATAG+AGG | - | chr8_1:23215090-23215109 | Msa1185760:intron | 10.0% |
| !!! | TGATTTGTTTTTTTTTTTTT+TGG | - | chr8_1:23215719-23215738 | Msa1185760:intron | 10.0% |
| !!! | CAAAAAAATATTTTTTTTTG+GGG | + | chr8_1:23216234-23216253 | None:intergenic | 10.0% |
| !!! | CTCAAAAAAATATTTTTTTT+TGG | + | chr8_1:23216236-23216255 | None:intergenic | 10.0% |
| !!! | CAAAAAAAAATATTTTTTTG+AGG | - | chr8_1:23216234-23216253 | Msa1185760:intron | 10.0% |
| !! | TAGCTAAATATATATTATTA+GGG | + | chr8_1:23216288-23216307 | None:intergenic | 10.0% |
| !!! | TTTTATTAATAATAATTGTG+TGG | + | chr8_1:23216498-23216517 | None:intergenic | 10.0% |
| !!! | ATTTTTTTAAACTAATCTAA+TGG | + | chr8_1:23216821-23216840 | None:intergenic | 10.0% |
| !! | ACTAAGTAAAAATAATAATT+TGG | + | chr8_1:23216947-23216966 | None:intergenic | 10.0% |
| !!! | ATATATATATCTTTTTAATC+TGG | - | chr8_1:23217025-23217044 | Msa1185760:intron | 10.0% |
| !! | TATTAGATGTAAATATAAAA+TGG | + | chr8_1:23217483-23217502 | None:intergenic | 10.0% |
| !! | AAACAAGAAATATTAATTAT+GGG | + | chr8_1:23217694-23217713 | None:intergenic | 10.0% |
| !! | TAAACAAGAAATATTAATTA+TGG | + | chr8_1:23217695-23217714 | None:intergenic | 10.0% |
| !! | TTGCTTAATTACTTAATTAT+TGG | - | chr8_1:23213817-23213836 | Msa1185760:intron | 15.0% |
| !!! | AATCTAAACATCTTTTTTTA+TGG | + | chr8_1:23214047-23214066 | None:intergenic | 15.0% |
| !!! | GTTTTTTTTTATTTTGAAGA+TGG | + | chr8_1:23214455-23214474 | None:intergenic | 15.0% |
| !! | TGTTACTACTATATTTATAT+TGG | - | chr8_1:23215474-23215493 | Msa1185760:intron | 15.0% |
| !! | TGTTCAAAAAAATAAAACAA+GGG | + | chr8_1:23216059-23216078 | None:intergenic | 15.0% |
| !! | TTGTTCAAAAAAATAAAACA+AGG | + | chr8_1:23216060-23216079 | None:intergenic | 15.0% |
| !!! | TTTGACATTTTATAAAACAA+GGG | + | chr8_1:23216090-23216109 | None:intergenic | 15.0% |
| !!! | TTTTGACATTTTATAAAACA+AGG | + | chr8_1:23216091-23216110 | None:intergenic | 15.0% |
| !!! | TGTTTTATAAAATGTCAAAA+TGG | - | chr8_1:23216091-23216110 | Msa1185760:intron | 15.0% |
| !! | AGCTAAATATATATTATTAG+GGG | + | chr8_1:23216287-23216306 | None:intergenic | 15.0% |
| !! | GTAGCTAAATATATATTATT+AGG | + | chr8_1:23216289-23216308 | None:intergenic | 15.0% |
| !!! | TACTTAGTAGTTTTTTTTTT+TGG | - | chr8_1:23216959-23216978 | Msa1185760:intron | 15.0% |
| !!! | ACTTAGTAGTTTTTTTTTTT+GGG | - | chr8_1:23216960-23216979 | Msa1185760:intron | 15.0% |
| !! | AAACTATTGGAATAATTAAA+AGG | - | chr8_1:23217128-23217147 | Msa1185760:intron | 15.0% |
| !! | AACTATTGGAATAATTAAAA+GGG | - | chr8_1:23217129-23217148 | Msa1185760:intron | 15.0% |
| !!! | ATATTTCTTGTTTATTTCAT+AGG | - | chr8_1:23217701-23217720 | Msa1185760:CDS | 15.0% |
| !! | ACTCAAATTTCATATTGATA+AGG | - | chr8_1:23214093-23214112 | Msa1185760:intron | 20.0% |
| !!! | CTTGTAAGTTTTTTTTGAAA+CGG | - | chr8_1:23214161-23214180 | Msa1185760:intron | 20.0% |
| !!! | TTATGGTTAGTAATTTTTAG+CGG | - | chr8_1:23214293-23214312 | Msa1185760:intron | 20.0% |
| !! | ACTTCTATATAACTAATGAT+CGG | - | chr8_1:23214473-23214492 | Msa1185760:intron | 20.0% |
| !!! | AAGATTTTGTTGATGAATAT+TGG | + | chr8_1:23214619-23214638 | None:intergenic | 20.0% |
| !! | TAATTGATTAAGAAGTGATA+TGG | - | chr8_1:23214830-23214849 | Msa1185760:intron | 20.0% |
| !! | TGGCAAATTGATTAATTATT+TGG | - | chr8_1:23215235-23215254 | Msa1185760:intron | 20.0% |
| !!! | GAGTATATATTTTTTAAACC+AGG | + | chr8_1:23215643-23215662 | None:intergenic | 20.0% |
| !! | TTCACTTAAAATAAAACTTG+GGG | + | chr8_1:23216311-23216330 | None:intergenic | 20.0% |
| !! | GTTCACTTAAAATAAAACTT+GGG | + | chr8_1:23216312-23216331 | None:intergenic | 20.0% |
| !! | AGTTCACTTAAAATAAAACT+TGG | + | chr8_1:23216313-23216332 | None:intergenic | 20.0% |
| !!! | TAAATAATTTGAAGTTCAAC+TGG | + | chr8_1:23216362-23216381 | None:intergenic | 20.0% |
| !! | ACAGTAAAATAATACAATAG+TGG | - | chr8_1:23216454-23216473 | Msa1185760:intron | 20.0% |
| !! | CAGTAAAATAATACAATAGT+GGG | - | chr8_1:23216455-23216474 | Msa1185760:intron | 20.0% |
| !! | ATTAATAATAATTGTGTGGT+GGG | + | chr8_1:23216494-23216513 | None:intergenic | 20.0% |
| !! | TATTAATAATAATTGTGTGG+TGG | + | chr8_1:23216495-23216514 | None:intergenic | 20.0% |
| !! | ATAAAAAAAACAAGGTAAAG+TGG | - | chr8_1:23216512-23216531 | Msa1185760:intron | 20.0% |
| !! | AAATGTAAGAAGAAAACTAT+TGG | - | chr8_1:23217115-23217134 | Msa1185760:intron | 20.0% |
| ! | TAGAAACCACAAAAACTATT+TGG | - | chr8_1:23214066-23214085 | Msa1185760:intron | 25.0% |
| !! | GTTTTTCCAAATAGTTTTTG+TGG | + | chr8_1:23214075-23214094 | None:intergenic | 25.0% |
| ! | CGTTTCAAAAAAAACTTACA+AGG | + | chr8_1:23214163-23214182 | None:intergenic | 25.0% |
| ! | AACATTGCATAATATATGCA+AGG | - | chr8_1:23214215-23214234 | Msa1185760:intron | 25.0% |
| !!! | TTTTTTATTTTGAAGATGGG+TGG | + | chr8_1:23214451-23214470 | None:intergenic | 25.0% |
| ! | TTCTTGCTTGTAAAAATGTA+AGG | + | chr8_1:23214540-23214559 | None:intergenic | 25.0% |
| ! | TATGGAAAGATGAAACTAAA+AGG | - | chr8_1:23214579-23214598 | Msa1185760:intron | 25.0% |
| ! | GAACTAATACTAGTAATCTA+TGG | - | chr8_1:23214877-23214896 | Msa1185760:intron | 25.0% |
| !! | TGTTTCTATATGAGAAGATA+GGG | + | chr8_1:23215012-23215031 | None:intergenic | 25.0% |
| ! | AAAAATATAACAAGATGGGT+GGG | + | chr8_1:23215082-23215101 | None:intergenic | 25.0% |
| ! | AAAAAATATAACAAGATGGG+TGG | + | chr8_1:23215083-23215102 | None:intergenic | 25.0% |
| !!! | GTCTTTCTTGTTATTGTTTT+TGG | - | chr8_1:23215170-23215189 | Msa1185760:intron | 25.0% |
| ! | CACCTTAATGTGAATAAATT+AGG | - | chr8_1:23215544-23215563 | Msa1185760:intron | 25.0% |
| ! | CACCTAATTTATTCACATTA+AGG | + | chr8_1:23215549-23215568 | None:intergenic | 25.0% |
| !! | TTTCATGAACCAAAACATTT+TGG | - | chr8_1:23215849-23215868 | Msa1185760:intron | 25.0% |
| ! | ATTAAAGACTCAAAGCAAAA+GGG | + | chr8_1:23215916-23215935 | None:intergenic | 25.0% |
| ! | AATTAAAGACTCAAAGCAAA+AGG | + | chr8_1:23215917-23215936 | None:intergenic | 25.0% |
| ! | TATAAAATGTCAAAATGGCA+CGG | - | chr8_1:23216096-23216115 | Msa1185760:intron | 25.0% |
| !! | ATTTTTGCACAGACTTATTT+GGG | + | chr8_1:23216127-23216146 | None:intergenic | 25.0% |
| !! | AATTTTTGCACAGACTTATT+TGG | + | chr8_1:23216128-23216147 | None:intergenic | 25.0% |
| !!! | AAATATTTTTTTGAGGGAGT+AGG | - | chr8_1:23216241-23216260 | Msa1185760:intron | 25.0% |
| ! | ATTATTTAATCGTGTCGTAT+AGG | - | chr8_1:23216374-23216393 | Msa1185760:intron | 25.0% |
| ! | AATAGTAGCTATTTATGTGT+GGG | + | chr8_1:23216582-23216601 | None:intergenic | 25.0% |
| ! | TAATAGTAGCTATTTATGTG+TGG | + | chr8_1:23216583-23216602 | None:intergenic | 25.0% |
| !!! | TTCTTTTGTTGTAGCTTTTT+TGG | - | chr8_1:23216611-23216630 | Msa1185760:intron | 25.0% |
| ! | TTAAACTAATCTAATGGAGT+AGG | + | chr8_1:23216815-23216834 | None:intergenic | 25.0% |
| !!! | TAGTAGTTTTTTTTTTTGGG+TGG | - | chr8_1:23216963-23216982 | Msa1185760:intron | 25.0% |
| ! | AACTCAAATACAAAGGATTT+AGG | - | chr8_1:23217214-23217233 | Msa1185760:intron | 25.0% |
| ! | CATAACAGTCAAAATATTGA+AGG | + | chr8_1:23217338-23217357 | None:intergenic | 25.0% |
| ! | GAGCAAAAATATATTAAGAG+TGG | + | chr8_1:23217510-23217529 | None:intergenic | 25.0% |
| !! | TTTTTGCTCTTAAGATTTAG+AGG | - | chr8_1:23217521-23217540 | Msa1185760:intron | 25.0% |
| ! | TCAATGTCATATACAAAAGT+AGG | + | chr8_1:23217556-23217575 | None:intergenic | 25.0% |
| ! | TGACATTGAAAAGATACAAA+AGG | - | chr8_1:23217567-23217586 | Msa1185760:intron | 25.0% |
| ! | GACATTGAAAAGATACAAAA+GGG | - | chr8_1:23217568-23217587 | Msa1185760:intron | 25.0% |
| ! | AAATATTAATTATGGGTCAC+AGG | + | chr8_1:23217687-23217706 | None:intergenic | 25.0% |
| AAAGTTGCTACAAAATGTTC+CGG | - | chr8_1:23213652-23213671 | Msa1185760:intron | 30.0% | |
| ATCATGCTATACTCTAGATA+AGG | - | chr8_1:23213849-23213868 | Msa1185760:intron | 30.0% | |
| AAAGGATATATACTAGGGAT+AGG | + | chr8_1:23213911-23213930 | None:intergenic | 30.0% | |
| GAGAGAAAGGATATATACTA+GGG | + | chr8_1:23213916-23213935 | None:intergenic | 30.0% | |
| AGAGAGAAAGGATATATACT+AGG | + | chr8_1:23213917-23213936 | None:intergenic | 30.0% | |
| GTCAAGACAAGAAAAAGAAA+GGG | + | chr8_1:23214013-23214032 | None:intergenic | 30.0% | |
| AGTCAAGACAAGAAAAAGAA+AGG | + | chr8_1:23214014-23214033 | None:intergenic | 30.0% | |
| ! | TTCTTTTTCTTGTCTTGACT+TGG | - | chr8_1:23214014-23214033 | Msa1185760:intron | 30.0% |
| !!! | ACATTGTCCGTTTCTTTTTT+TGG | + | chr8_1:23214265-23214284 | None:intergenic | 30.0% |
| GGACAATGTTGATATTGTTA+TGG | - | chr8_1:23214276-23214295 | Msa1185760:intron | 30.0% | |
| ATGATGAGTAATTTACGTAG+CGG | + | chr8_1:23214361-23214380 | None:intergenic | 30.0% | |
| TGGAAAACAAACTTACAATG+TGG | + | chr8_1:23214394-23214413 | None:intergenic | 30.0% | |
| !! | CATTGTAAGTTTGTTTTCCA+AGG | - | chr8_1:23214394-23214413 | Msa1185760:intron | 30.0% |
| ! | TTGTTTTCCAAGGATGATTA+TGG | - | chr8_1:23214404-23214423 | Msa1185760:intron | 30.0% |
| GAAAGAGGAAAACAATGTAT+AGG | - | chr8_1:23214739-23214758 | Msa1185760:intron | 30.0% | |
| TCTTAATCAATTAAGCTCTG+TGG | + | chr8_1:23214823-23214842 | None:intergenic | 30.0% | |
| TGATTAAGAAGTGATATGGT+CGG | - | chr8_1:23214834-23214853 | Msa1185760:intron | 30.0% | |
| GATTCAACCATTAACATCAT+TGG | - | chr8_1:23214899-23214918 | Msa1185760:intron | 30.0% | |
| ACTAAGACCAATGATGTTAA+TGG | + | chr8_1:23214909-23214928 | None:intergenic | 30.0% | |
| !!! | TCTTAGTTTTTGCTGGTTTT+AGG | - | chr8_1:23214922-23214941 | Msa1185760:intron | 30.0% |
| !!! | CTTAGTTTTTGCTGGTTTTA+GGG | - | chr8_1:23214923-23214942 | Msa1185760:intron | 30.0% |
| !!! | TTAGTTTTTGCTGGTTTTAG+GGG | - | chr8_1:23214924-23214943 | Msa1185760:intron | 30.0% |
| !!! | TGGGTTTTGGATATTTTGAT+AGG | - | chr8_1:23214966-23214985 | Msa1185760:intron | 30.0% |
| ! | GTGTTTCTATATGAGAAGAT+AGG | + | chr8_1:23215013-23215032 | None:intergenic | 30.0% |
| ACAAGAAAGACCACAATTTA+GGG | + | chr8_1:23215161-23215180 | None:intergenic | 30.0% | |
| AACAAGAAAGACCACAATTT+AGG | + | chr8_1:23215162-23215181 | None:intergenic | 30.0% | |
| TTACTAGTACTTGAGAAACT+TGG | - | chr8_1:23215206-23215225 | Msa1185760:intron | 30.0% | |
| TCAAACAATATCGAACAATG+TGG | + | chr8_1:23215358-23215377 | None:intergenic | 30.0% | |
| ATAGGGATTACAAACATACA+AGG | + | chr8_1:23215591-23215610 | None:intergenic | 30.0% | |
| TGACATTGACCTATTATTTG+AGG | + | chr8_1:23215615-23215634 | None:intergenic | 30.0% | |
| TTTATATCCCCAAAATGACT+TGG | - | chr8_1:23215764-23215783 | Msa1185760:intron | 30.0% | |
| AACTAACATCTAGATGTTGA+AGG | + | chr8_1:23215792-23215811 | None:intergenic | 30.0% | |
| !!! | TTTTGGTTCATGAAAGTGAA+TGG | + | chr8_1:23215844-23215863 | None:intergenic | 30.0% |
| ! | TGAACAACACCAAAATGTTT+TGG | + | chr8_1:23215861-23215880 | None:intergenic | 30.0% |
| !!! | AAACATTTTGGTGTTGTTCA+AGG | - | chr8_1:23215861-23215880 | Msa1185760:intron | 30.0% |
| CTAAGAAACCTTGTTACTAA+AGG | + | chr8_1:23215951-23215970 | None:intergenic | 30.0% | |
| GAAAAATGAGAACTATAAGC+TGG | + | chr8_1:23215981-23216000 | None:intergenic | 30.0% | |
| ATAAAATGTCAAAATGGCAC+GGG | - | chr8_1:23216097-23216116 | Msa1185760:intron | 30.0% | |
| !!! | ATTTTTTTTTGGGGTAGCAA+GGG | + | chr8_1:23216225-23216244 | None:intergenic | 30.0% |
| !!! | TATTTTTTTTTGGGGTAGCA+AGG | + | chr8_1:23216226-23216245 | None:intergenic | 30.0% |
| ATAGTAGCTATTTATGTGTG+GGG | + | chr8_1:23216581-23216600 | None:intergenic | 30.0% | |
| AAAAAGCCACATTAGAATAG+CGG | + | chr8_1:23216643-23216662 | None:intergenic | 30.0% | |
| !!! | CTATTCTAATGTGGCTTTTT+TGG | - | chr8_1:23216643-23216662 | Msa1185760:intron | 30.0% |
| AAAAAGCCACATTAGAATAG+CGG | + | chr8_1:23216643-23216662 | None:intergenic | 30.0% | |
| !!! | CTATTCTAATGTGGCTTTTT+TGG | - | chr8_1:23216643-23216662 | Msa1185760:intron | 30.0% |
| ! | TAGTTTATTGCCGCATTTTT+CGG | - | chr8_1:23216709-23216728 | Msa1185760:intron | 30.0% |
| TACACTTGATTCAACAAGAA+CGG | + | chr8_1:23216741-23216760 | None:intergenic | 30.0% | |
| !! | ATTTGGTGCCCTTAAAATAA+TGG | + | chr8_1:23216930-23216949 | None:intergenic | 30.0% |
| GATCACAAACTCAAATACAA+AGG | - | chr8_1:23217207-23217226 | Msa1185760:intron | 30.0% | |
| GGGAGAATTAAATTACATCA+AGG | + | chr8_1:23217439-23217458 | None:intergenic | 30.0% | |
| ATACAAAAGGGAATATACGA+GGG | - | chr8_1:23217580-23217599 | Msa1185760:CDS | 30.0% | |
| TGCTTGAGCTTCATAACAAA+TGG | + | chr8_1:23213705-23213724 | None:intergenic | 35.0% | |
| ! | TTTGTTATGAAGCTCAAGCA+AGG | - | chr8_1:23213705-23213724 | Msa1185760:intron | 35.0% |
| TATCTTTACTCTTCAGCAAC+AGG | - | chr8_1:23213760-23213779 | Msa1185760:intron | 35.0% | |
| ! | ATTATAGCTAGCTAGCTTCT+AGG | - | chr8_1:23213951-23213970 | Msa1185760:intron | 35.0% |
| TGCATAATATATGCAAGGTC+CGG | - | chr8_1:23214220-23214239 | Msa1185760:intron | 35.0% | |
| !!! | TTTCTTTTTTTGGTGGTGTC+CGG | + | chr8_1:23214255-23214274 | None:intergenic | 35.0% |
| GACACCACCAAAAAAAGAAA+CGG | - | chr8_1:23214255-23214274 | Msa1185760:intron | 35.0% | |
| !!! | TTGTCCGTTTCTTTTTTTGG+TGG | + | chr8_1:23214262-23214281 | None:intergenic | 35.0% |
| !!! | GTAATTTTTAGCGGTATGTC+AGG | - | chr8_1:23214302-23214321 | Msa1185760:intron | 35.0% |
| AACAAACTTACAATGTGGCT+TGG | + | chr8_1:23214389-23214408 | None:intergenic | 35.0% | |
| GATTAAGCCATAATCATCCT+TGG | + | chr8_1:23214414-23214433 | None:intergenic | 35.0% | |
| !! | ATGGGTGGTATCTTTGATTT+TGG | + | chr8_1:23214436-23214455 | None:intergenic | 35.0% |
| TTCATGCAATGCTAGTAGTA+TGG | - | chr8_1:23214641-23214660 | Msa1185760:intron | 35.0% | |
| ! | GCTAGTAGTATGGTTTTTCT+TGG | - | chr8_1:23214651-23214670 | Msa1185760:intron | 35.0% |
| ! | ACTTTTGTTCCTCTTTTGGA+AGG | + | chr8_1:23214700-23214719 | None:intergenic | 35.0% |
| TCCAAAAGAGGAACAAAAGT+TGG | - | chr8_1:23214700-23214719 | Msa1185760:intron | 35.0% | |
| CCAAAAGAGGAACAAAAGTT+GGG | - | chr8_1:23214701-23214720 | Msa1185760:intron | 35.0% | |
| ! | AAAGTTGGGTTTGAGTCTTT+TGG | - | chr8_1:23214715-23214734 | Msa1185760:intron | 35.0% |
| ! | AAGTTGGGTTTGAGTCTTTT+GGG | - | chr8_1:23214716-23214735 | Msa1185760:intron | 35.0% |
| !!! | TCATTGGTCTTAGTTTTTGC+TGG | - | chr8_1:23214915-23214934 | Msa1185760:intron | 35.0% |
| !! | TAATGGTCGGTTAGTTTCTT+GGG | - | chr8_1:23214947-23214966 | Msa1185760:intron | 35.0% |
| TGGGATTGCTATATAGTGAT+AGG | + | chr8_1:23215063-23215082 | None:intergenic | 35.0% | |
| AAGTTAAGACACCATCAAAC+CGG | - | chr8_1:23215128-23215147 | Msa1185760:intron | 35.0% | |
| !!! | CTTGAGAAACTTGGCTTTTT+TGG | - | chr8_1:23215215-23215234 | Msa1185760:intron | 35.0% |
| AACGTTGAGATTAACTAGCT+AGG | - | chr8_1:23215297-23215316 | Msa1185760:intron | 35.0% | |
| TTTCTAATCACGTTGCTACT+GGG | + | chr8_1:23215520-23215539 | None:intergenic | 35.0% | |
| ATTTCTAATCACGTTGCTAC+TGG | + | chr8_1:23215521-23215540 | None:intergenic | 35.0% | |
| GTGAATAAATTAGGTGTTCG+AGG | - | chr8_1:23215553-23215572 | Msa1185760:intron | 35.0% | |
| ATAAATTAGGTGTTCGAGGT+TGG | - | chr8_1:23215557-23215576 | Msa1185760:intron | 35.0% | |
| ATCCCTATGCCTCAAATAAT+AGG | - | chr8_1:23215603-23215622 | Msa1185760:intron | 35.0% | |
| ! | GACCTATTATTTGAGGCATA+GGG | + | chr8_1:23215608-23215627 | None:intergenic | 35.0% |
| ! | TGACCTATTATTTGAGGCAT+AGG | + | chr8_1:23215609-23215628 | None:intergenic | 35.0% |
| TAGGTCAATGTCAAAAATCC+TGG | - | chr8_1:23215622-23215641 | Msa1185760:intron | 35.0% | |
| !! | TGAAGGAACCAAGTCATTTT+GGG | + | chr8_1:23215775-23215794 | None:intergenic | 35.0% |
| ! | TTGAAGGAACCAAGTCATTT+TGG | + | chr8_1:23215776-23215795 | None:intergenic | 35.0% |
| AGAAACCTTGTTACTAAAGG+TGG | + | chr8_1:23215948-23215967 | None:intergenic | 35.0% | |
| !! | TTTACGTAGGTTTTAGTCGT+TGG | + | chr8_1:23216034-23216053 | None:intergenic | 35.0% |
| !! | TAAAACAAGGGTGTTTACGT+AGG | + | chr8_1:23216047-23216066 | None:intergenic | 35.0% |
| TACAATCCGCTATTCTAATG+TGG | - | chr8_1:23216634-23216653 | Msa1185760:intron | 35.0% | |
| TACAATCCGCTATTCTAATG+TGG | - | chr8_1:23216634-23216653 | Msa1185760:intron | 35.0% | |
| ! | ACGGATTATACCGAAAAATG+CGG | + | chr8_1:23216722-23216741 | None:intergenic | 35.0% |
| AAGCTAGCGATAATTCTATG+AGG | + | chr8_1:23216861-23216880 | None:intergenic | 35.0% | |
| !! | CCAAATATTTTTGCTGCCTT+GGG | + | chr8_1:23217168-23217187 | None:intergenic | 35.0% |
| !! | TCCAAATATTTTTGCTGCCT+TGG | + | chr8_1:23217169-23217188 | None:intergenic | 35.0% |
| CCATATAGCTACTAAGAAGA+CGG | + | chr8_1:23217380-23217399 | None:intergenic | 35.0% | |
| CGTCTTCTTAGTAGCTATAT+GGG | - | chr8_1:23217378-23217397 | Msa1185760:intron | 35.0% | |
| GATACAAAAGGGAATATACG+AGG | - | chr8_1:23217579-23217598 | Msa1185760:CDS | 35.0% | |
| TACAAAAGGGAATATACGAG+GGG | - | chr8_1:23217581-23217600 | Msa1185760:CDS | 35.0% | |
| GAAGACAAGTCATATGTATC+TGG | + | chr8_1:23217870-23217889 | None:intergenic | 35.0% | |
| ! | AGTATAAACTCGGGTTGTAG+TGG | - | chr8_1:23213458-23213477 | Msa1185760:CDS | 40.0% |
| ! | TTTGAGAAGGAAGTGTATCC+CGG | - | chr8_1:23213541-23213560 | Msa1185760:CDS | 40.0% |
| TAAGGCGCAAAAATACATCC+CGG | + | chr8_1:23213563-23213582 | None:intergenic | 40.0% | |
| ! | TTTTGCGCCTTACTTCGATT+CGG | - | chr8_1:23213571-23213590 | Msa1185760:CDS | 40.0% |
| ATGAGCAACACAACCAAAGA+CGG | + | chr8_1:23213741-23213760 | None:intergenic | 40.0% | |
| CTGGAAAAGCTTAGAGAGAA+AGG | + | chr8_1:23213929-23213948 | None:intergenic | 40.0% | |
| AGCTAGCTAGCTATAATAGC+TGG | + | chr8_1:23213948-23213967 | None:intergenic | 40.0% | |
| GCATAATATATGCAAGGTCC+GGG | - | chr8_1:23214221-23214240 | Msa1185760:intron | 40.0% | |
| CATAATATATGCAAGGTCCG+GGG | - | chr8_1:23214222-23214241 | Msa1185760:intron | 40.0% | |
| !!! | TTCTTTTTTTGGTGGTGTCC+GGG | + | chr8_1:23214254-23214273 | None:intergenic | 40.0% |
| ! | TACGTAGCGGAATGATGAAA+AGG | + | chr8_1:23214348-23214367 | None:intergenic | 40.0% |
| ! | AAACTTACAATGTGGCTTGG+TGG | + | chr8_1:23214386-23214405 | None:intergenic | 40.0% |
| TGCTTTATGCCTTCCAAAAG+AGG | - | chr8_1:23214688-23214707 | Msa1185760:intron | 40.0% | |
| ! | CCCAACTTTTGTTCCTCTTT+TGG | + | chr8_1:23214704-23214723 | None:intergenic | 40.0% |
| ! | AGTTGGGTTTGAGTCTTTTG+GGG | - | chr8_1:23214717-23214736 | Msa1185760:intron | 40.0% |
| !! | TTTGAGTCTTTTGGGGAAAG+AGG | - | chr8_1:23214724-23214743 | Msa1185760:intron | 40.0% |
| TTAAGAAGTGATATGGTCGG+CGG | - | chr8_1:23214837-23214856 | Msa1185760:intron | 40.0% | |
| !!! | TTTGCTGGTTTTAGGGGTAA+TGG | - | chr8_1:23214930-23214949 | Msa1185760:intron | 40.0% |
| !! | GTAATGGTCGGTTAGTTTCT+TGG | - | chr8_1:23214946-23214965 | Msa1185760:intron | 40.0% |
| !!! | TCGGTTAGTTTCTTGGGTTT+TGG | - | chr8_1:23214953-23214972 | Msa1185760:intron | 40.0% |
| ACATAAAGCAGGAAAGGCTA+TGG | + | chr8_1:23215332-23215351 | None:intergenic | 40.0% | |
| TGGTCAACATAAAGCAGGAA+AGG | + | chr8_1:23215338-23215357 | None:intergenic | 40.0% | |
| CAATGTGGTCAACATAAAGC+AGG | + | chr8_1:23215343-23215362 | None:intergenic | 40.0% | |
| !! | GAAGGAACCAAGTCATTTTG+GGG | + | chr8_1:23215774-23215793 | None:intergenic | 40.0% |
| TTCTGCGCTTTCACACTAAT+AGG | + | chr8_1:23215888-23215907 | None:intergenic | 40.0% | |
| ! | TATTAGTGTGAAAGCGCAGA+AGG | - | chr8_1:23215887-23215906 | Msa1185760:intron | 40.0% |
| CTTGTCCACCTTTAGTAACA+AGG | - | chr8_1:23215940-23215959 | Msa1185760:intron | 40.0% | |
| TTGATGAGCAACACTTGCTT+AGG | - | chr8_1:23216155-23216174 | Msa1185760:intron | 40.0% | |
| TGATGAGCAACACTTGCTTA+GGG | - | chr8_1:23216156-23216175 | Msa1185760:intron | 40.0% | |
| TAATCGTGTCGTATAGGAAC+TGG | - | chr8_1:23216380-23216399 | Msa1185760:intron | 40.0% | |
| TCACAACACAACACACAACA+CGG | - | chr8_1:23216552-23216571 | Msa1185760:intron | 40.0% | |
| CTAGCGATAATTCTATGAGG+TGG | + | chr8_1:23216858-23216877 | None:intergenic | 40.0% | |
| CCTTAAAATAATGGTGCCCT+GGG | + | chr8_1:23216921-23216940 | None:intergenic | 40.0% | |
| !!! | CCAGGGCACCATTATTTTAA+GGG | - | chr8_1:23216919-23216938 | Msa1185760:intron | 40.0% |
| CCCAAGGCAGCAAAAATATT+TGG | - | chr8_1:23217165-23217184 | Msa1185760:intron | 40.0% | |
| GGCAGCAAAAATATTTGGAC+CGG | - | chr8_1:23217170-23217189 | Msa1185760:intron | 40.0% | |
| TTTGTGATCAAGCAAGTGCA+TGG | + | chr8_1:23217196-23217215 | None:intergenic | 40.0% | |
| CTAAGAAGACGGTGGTAATT+GGG | + | chr8_1:23217369-23217388 | None:intergenic | 40.0% | |
| ACTAAGAAGACGGTGGTAAT+TGG | + | chr8_1:23217370-23217389 | None:intergenic | 40.0% | |
| TATAGCTACTAAGAAGACGG+TGG | + | chr8_1:23217377-23217396 | None:intergenic | 40.0% | |
| CCGTCTTCTTAGTAGCTATA+TGG | - | chr8_1:23217377-23217396 | Msa1185760:intron | 40.0% | |
| GTACTTCATATGTAGCTAGG+TGG | + | chr8_1:23217764-23217783 | None:intergenic | 40.0% | |
| ! | GAGGTACTTCATATGTAGCT+AGG | + | chr8_1:23217767-23217786 | None:intergenic | 40.0% |
| TATCTGGCATGGTTGAAGAA+GGG | + | chr8_1:23217854-23217873 | None:intergenic | 40.0% | |
| CAAGTCATATGTATCTGGCA+TGG | + | chr8_1:23217865-23217884 | None:intergenic | 40.0% | |
| ! | TTGAGAAGGAAGTGTATCCC+GGG | - | chr8_1:23213542-23213561 | Msa1185760:CDS | 45.0% |
| AAGGCGCAAAAATACATCCC+GGG | + | chr8_1:23213562-23213581 | None:intergenic | 45.0% | |
| ! | ACATTTTGCAGCGGTTCACA+AGG | - | chr8_1:23213607-23213626 | Msa1185760:CDS | 45.0% |
| ! | CAGCGGTTCACAAGGTTTTT+GGG | - | chr8_1:23213615-23213634 | Msa1185760:CDS | 45.0% |
| ! | AGCGGTTCACAAGGTTTTTG+GGG | - | chr8_1:23213616-23213635 | Msa1185760:CDS | 45.0% |
| TGAGCAACACAACCAAAGAC+GGG | + | chr8_1:23213740-23213759 | None:intergenic | 45.0% | |
| !!! | TTTTGAAACGGATGTCCCTG+TGG | - | chr8_1:23214173-23214192 | Msa1185760:intron | 45.0% |
| CCAACTGAGTTAAGTCCACA+GGG | + | chr8_1:23214191-23214210 | None:intergenic | 45.0% | |
| ACCAACTGAGTTAAGTCCAC+AGG | + | chr8_1:23214192-23214211 | None:intergenic | 45.0% | |
| TGCAAAGAGCCATGGAACAA+AGG | - | chr8_1:23214769-23214788 | Msa1185760:intron | 45.0% | |
| GCAAAGAGCCATGGAACAAA+GGG | - | chr8_1:23214770-23214789 | Msa1185760:intron | 45.0% | |
| CAAAGAGCCATGGAACAAAG+GGG | - | chr8_1:23214771-23214790 | Msa1185760:intron | 45.0% | |
| AAACTGTCCCCTTTGTTCCA+TGG | + | chr8_1:23214781-23214800 | None:intergenic | 45.0% | |
| TCGGCGGTTACACATATGTA+TGG | - | chr8_1:23214853-23214872 | Msa1185760:intron | 45.0% | |
| !!! | CTGGTTTTAGGGGTAATGGT+CGG | - | chr8_1:23214934-23214953 | Msa1185760:intron | 45.0% |
| ! | CACAATTTAGGGCAGATTGC+CGG | + | chr8_1:23215150-23215169 | None:intergenic | 45.0% |
| GATGAGCAACACTTGCTTAG+GGG | - | chr8_1:23216157-23216176 | Msa1185760:intron | 45.0% | |
| AGGGGCGAATGGTAGTATAA+GGG | - | chr8_1:23216191-23216210 | Msa1185760:intron | 45.0% | |
| GCGAATGGTAGTATAAGGGA+GGG | - | chr8_1:23216195-23216214 | Msa1185760:intron | 45.0% | |
| CGAATGGTAGTATAAGGGAG+GGG | - | chr8_1:23216196-23216215 | Msa1185760:intron | 45.0% | |
| !! | ATAATTGTGTGGTGGGCTGT+GGG | + | chr8_1:23216487-23216506 | None:intergenic | 45.0% |
| !! | AATAATTGTGTGGTGGGCTG+TGG | + | chr8_1:23216488-23216507 | None:intergenic | 45.0% |
| CACAACACAACACACAACAC+GGG | - | chr8_1:23216553-23216572 | Msa1185760:intron | 45.0% | |
| !! | CCCAGGGCACCATTATTTTA+AGG | - | chr8_1:23216918-23216937 | Msa1185760:intron | 45.0% |
| CCCTTAAAATAATGGTGCCC+TGG | + | chr8_1:23216922-23216941 | None:intergenic | 45.0% | |
| GCAGAACTCTCCTACTTACA+AGG | - | chr8_1:23217738-23217757 | Msa1185760:CDS | 45.0% | |
| TGGTTGAAGAAGGGGCTAAT+GGG | + | chr8_1:23217845-23217864 | None:intergenic | 45.0% | |
| ATGGTTGAAGAAGGGGCTAA+TGG | + | chr8_1:23217846-23217865 | None:intergenic | 45.0% | |
| ATCTGGCATGGTTGAAGAAG+GGG | + | chr8_1:23217853-23217872 | None:intergenic | 45.0% | |
| GTATCTGGCATGGTTGAAGA+AGG | + | chr8_1:23217855-23217874 | None:intergenic | 45.0% | |
| !!! | TCAAAAAAATATTTTTTTTT+GGG | + | chr8_1:23216235-23216254 | None:intergenic | 5.0% |
| !!! | AAAAAAAAATATTTTTTTGA+GGG | - | chr8_1:23216235-23216254 | Msa1185760:intron | 5.0% |
| !!! | TATTATTATTTATCTTTTTT+GGG | + | chr8_1:23216416-23216435 | None:intergenic | 5.0% |
| !!! | TTATTATTATTTATCTTTTT+TGG | + | chr8_1:23216417-23216436 | None:intergenic | 5.0% |
| !! | TATTATTAATAAAAAAAACA+AGG | - | chr8_1:23216504-23216523 | Msa1185760:intron | 5.0% |
| !! | TAAAAAAATAAAATTATATG+TGG | - | chr8_1:23216832-23216851 | Msa1185760:intron | 5.0% |
| !!! | AATTAAATTATATTGATAAT+GGG | + | chr8_1:23217459-23217478 | None:intergenic | 5.0% |
| !! | AAATTAAATTATATTGATAA+TGG | + | chr8_1:23217460-23217479 | None:intergenic | 5.0% |
| ! | AACTCGGGTTGTAGTGGTAG+CGG | - | chr8_1:23213464-23213483 | Msa1185760:CDS | 50.0% |
| AAAACTTGCACGCGCCACAA+GGG | + | chr8_1:23213523-23213542 | None:intergenic | 50.0% | |
| AAAAACTTGCACGCGCCACA+AGG | + | chr8_1:23213524-23213543 | None:intergenic | 50.0% | |
| !! | GCGCGTGCAAGTTTTTGAGA+AGG | - | chr8_1:23213528-23213547 | Msa1185760:CDS | 50.0% |
| CCTTGCTCCGAATCGAAGTA+AGG | + | chr8_1:23213581-23213600 | None:intergenic | 50.0% | |
| !! | CCTTACTTCGATTCGGAGCA+AGG | - | chr8_1:23213578-23213597 | Msa1185760:CDS | 50.0% |
| ! | AGGCGCTTCACATTTTGCAG+CGG | - | chr8_1:23213598-23213617 | Msa1185760:CDS | 50.0% |
| ! | GCAGCGGTTCACAAGGTTTT+TGG | - | chr8_1:23213614-23213633 | Msa1185760:CDS | 50.0% |
| GCATCAAGACGCTTGTGTAC+CGG | + | chr8_1:23213674-23213693 | None:intergenic | 50.0% | |
| GGTACACAAGCGTCTTGATG+CGG | - | chr8_1:23213673-23213692 | Msa1185760:intron | 50.0% | |
| AGGTTGAGAGATCCCGTCTT+TGG | - | chr8_1:23213725-23213744 | Msa1185760:intron | 50.0% | |
| CCCTGTGGACTTAACTCAGT+TGG | - | chr8_1:23214188-23214207 | Msa1185760:intron | 50.0% | |
| TTCCATGGCTCTTTGCATGC+AGG | + | chr8_1:23214766-23214785 | None:intergenic | 50.0% | |
| CGGCAATCTGCCCTAAATTG+TGG | - | chr8_1:23215148-23215167 | Msa1185760:intron | 50.0% | |
| GGTGTTCGAGGTTGGATACT+TGG | - | chr8_1:23215565-23215584 | Msa1185760:intron | 50.0% | |
| CAGGGGCGAATGGTAGTATA+AGG | - | chr8_1:23216190-23216209 | Msa1185760:intron | 50.0% | |
| GGCGAATGGTAGTATAAGGG+AGG | - | chr8_1:23216194-23216213 | Msa1185760:intron | 50.0% | |
| TGATCAAGCAAGTGCATGGC+CGG | + | chr8_1:23217192-23217211 | None:intergenic | 50.0% | |
| !! | AGCTAGGTGGCCTTGTAAGT+AGG | + | chr8_1:23217751-23217770 | None:intergenic | 50.0% |
| TCCACCACAAGCACTTCCAA+TGG | - | chr8_1:23217803-23217822 | Msa1185760:CDS | 50.0% | |
| !! | ACCATTGGAAGTGCTTGTGG+TGG | + | chr8_1:23217807-23217826 | None:intergenic | 50.0% |
| !! | GAGACCATTGGAAGTGCTTG+TGG | + | chr8_1:23217810-23217829 | None:intergenic | 50.0% |
| AGGTTGGGTAGTGAGACCAT+TGG | + | chr8_1:23217822-23217841 | None:intergenic | 50.0% | |
| TTGAAGAAGGGGCTAATGGG+AGG | + | chr8_1:23217842-23217861 | None:intergenic | 50.0% | |
| !! | TGTAGTGGTAGCGGTTGCAG+TGG | - | chr8_1:23213473-23213492 | Msa1185760:CDS | 55.0% |
| !! | GGTTGCAGTGGTGGTGGAAA+CGG | - | chr8_1:23213485-23213504 | Msa1185760:CDS | 55.0% |
| GTCCTGCATGCAAAGAGCCA+TGG | - | chr8_1:23214761-23214780 | Msa1185760:intron | 55.0% | |
| !! | AGGGCAGATTGCCGGTTTGA+TGG | + | chr8_1:23215142-23215161 | None:intergenic | 55.0% |
| GAGCAACACTTGCTTAGGGG+TGG | - | chr8_1:23216160-23216179 | Msa1185760:intron | 55.0% | |
| ! | ATTATCGCTAGCTTCGCCGC+TGG | - | chr8_1:23216867-23216886 | Msa1185760:intron | 55.0% |
| GGGCACAATTGTATCGCCCA+AGG | - | chr8_1:23217149-23217168 | Msa1185760:intron | 55.0% | |
| !! | GGAGAAGGTGTTGGTGGTTG+AGG | + | chr8_1:23217786-23217805 | None:intergenic | 55.0% |
| !! | TGTGGTGGAGAAGGTGTTGG+TGG | + | chr8_1:23217792-23217811 | None:intergenic | 55.0% |
| ! | GCTTGTGGTGGAGAAGGTGT+TGG | + | chr8_1:23217795-23217814 | None:intergenic | 55.0% |
| !! | GGAAGTGCTTGTGGTGGAGA+AGG | + | chr8_1:23217801-23217820 | None:intergenic | 55.0% |
| GAAGGGGCTAATGGGAGGTT+GGG | + | chr8_1:23217837-23217856 | None:intergenic | 55.0% | |
| AGAAGGGGCTAATGGGAGGT+TGG | + | chr8_1:23217838-23217857 | None:intergenic | 55.0% | |
| !! | AGTGGTAGCGGTTGCAGTGG+TGG | - | chr8_1:23213476-23213495 | Msa1185760:CDS | 60.0% |
| !! | TGCAGTGGTGGTGGAAACGG+CGG | - | chr8_1:23213488-23213507 | Msa1185760:CDS | 60.0% |
| CTACCATTCGCCCCTGCTCA+GGG | + | chr8_1:23216186-23216205 | None:intergenic | 60.0% | |
| ACTACCATTCGCCCCTGCTC+AGG | + | chr8_1:23216187-23216206 | None:intergenic | 60.0% | |
| ! | GGTAGCGGTTGCAGTGGTGG+TGG | - | chr8_1:23213479-23213498 | Msa1185760:CDS | 65.0% |
| GGTGGAAACGGCGGTGCTTG+TGG | - | chr8_1:23213497-23213516 | Msa1185760:CDS | 65.0% | |
| CAAGGTCCGGGGTTCGAACC+CGG | - | chr8_1:23214233-23214252 | Msa1185760:intron | 65.0% | |
| TGGTGTCCGGGTTCGAACCC+CGG | + | chr8_1:23214242-23214261 | None:intergenic | 65.0% | |
| CTTAGGGGTGGCCCTGAGCA+GGG | - | chr8_1:23216172-23216191 | Msa1185760:intron | 65.0% | |
| TTAGGGGTGGCCCTGAGCAG+GGG | - | chr8_1:23216173-23216192 | Msa1185760:intron | 65.0% | |
| GCTCCTCCCGTTCACCCTCA+GGG | + | chr8_1:23216893-23216912 | None:intergenic | 65.0% | |
| CTGAGGGTGAACGGGAGGAG+CGG | - | chr8_1:23216892-23216911 | Msa1185760:intron | 65.0% | |
| GGCGGTGCTTGTGGCCCTTG+TGG | - | chr8_1:23213506-23213525 | Msa1185760:CDS | 70.0% | |
| GCTTAGGGGTGGCCCTGAGC+AGG | - | chr8_1:23216171-23216190 | Msa1185760:intron | 70.0% | |
| TGGCCCTGAGCAGGGGCGAA+TGG | - | chr8_1:23216180-23216199 | Msa1185760:intron | 70.0% | |
| TAGCTTCGCCGCTGGCCCTG+AGG | - | chr8_1:23216875-23216894 | Msa1185760:intron | 70.0% | |
| AGCTTCGCCGCTGGCCCTGA+GGG | - | chr8_1:23216876-23216895 | Msa1185760:intron | 70.0% | |
| CCGTTCACCCTCAGGGCCAG+CGG | + | chr8_1:23216886-23216905 | None:intergenic | 70.0% | |
| CCGCTGGCCCTGAGGGTGAA+CGG | - | chr8_1:23216883-23216902 | Msa1185760:intron | 70.0% | |
| CGCTGGCCCTGAGGGTGAAC+GGG | - | chr8_1:23216884-23216903 | Msa1185760:intron | 70.0% | |
| TGGCCCTGAGGGTGAACGGG+AGG | - | chr8_1:23216887-23216906 | Msa1185760:intron | 70.0% | |
| CGCTCCTCCCGTTCACCCTC+AGG | + | chr8_1:23216894-23216913 | None:intergenic | 70.0% | |
| AACGGGAGGAGCGGCAGCCC+AGG | - | chr8_1:23216901-23216920 | Msa1185760:intron | 75.0% | |
| ACGGGAGGAGCGGCAGCCCA+GGG | - | chr8_1:23216902-23216921 | Msa1185760:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 23213455 | 23217905 | 23213455 | ID=Msa1185760;Name=Msa1185760 |
| chr8_1 | mRNA | 23213455 | 23217905 | 23213455 | ID=Msa1185760-mRNA-1;Parent=Msa1185760;Name=Msa1185760-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.5|1|1|1|2|0|170 |
| chr8_1 | exon | 23213455 | 23213637 | 23213455 | ID=Msa1185760-mRNA-1:exon:8556;Parent=Msa1185760-mRNA-1 |
| chr8_1 | exon | 23217579 | 23217905 | 23217579 | ID=Msa1185760-mRNA-1:exon:8555;Parent=Msa1185760-mRNA-1 |
| chr8_1 | CDS | 23217579 | 23217905 | 23217579 | ID=Msa1185760-mRNA-1:cds;Parent=Msa1185760-mRNA-1 |
| chr8_1 | CDS | 23213455 | 23213637 | 23213455 | ID=Msa1185760-mRNA-1:cds;Parent=Msa1185760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
