Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1186690 | XP_039686069.1 | 82.470 | 251 | 34 | 3 | 1 | 246 | 1 | 246 | 4.27e-144 | 435 |
Msa1186690 | XP_039686069.1 | 83.893 | 149 | 23 | 1 | 210 | 358 | 382 | 529 | 2.78e-77 | 262 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1186690 | sp|Q9SWG3|FAR1_ARATH | 37.956 | 274 | 137 | 7 | 21 | 284 | 43 | 293 | 1.46e-50 | 184 |
Msa1186690 | sp|Q9SWG3|FAR1_ARATH | 56.716 | 134 | 56 | 1 | 210 | 343 | 405 | 536 | 3.50e-43 | 163 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa1186690 | TF | FAR1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1186690 | MtrunA17_Chr2g0329031 | 48.168 | 191 | 92 | 3 | 27 | 216 | 8 | 192 | 2.86e-49 | 176 |
Msa1186690 | MtrunA17_Chr2g0329031 | 48.855 | 131 | 65 | 1 | 210 | 340 | 358 | 486 | 6.48e-43 | 158 |
Msa1186690 | MtrunA17_Chr1g0207551 | 42.788 | 208 | 115 | 2 | 7 | 210 | 6 | 213 | 6.49e-47 | 170 |
Msa1186690 | MtrunA17_Chr1g0207551 | 51.829 | 164 | 77 | 1 | 177 | 340 | 352 | 513 | 9.31e-47 | 169 |
Msa1186690 | MtrunA17_Chr3g0080351 | 43.216 | 199 | 73 | 3 | 32 | 213 | 75 | 250 | 1.12e-43 | 161 |
Msa1186690 | MtrunA17_Chr3g0080351 | 39.823 | 226 | 109 | 5 | 115 | 338 | 345 | 545 | 2.53e-40 | 151 |
Msa1186690 | MtrunA17_Chr2g0291581 | 47.482 | 139 | 65 | 2 | 213 | 345 | 412 | 548 | 6.20e-33 | 129 |
Msa1186690 | MtrunA17_Chr2g0291581 | 30.387 | 181 | 116 | 3 | 33 | 213 | 71 | 241 | 1.56e-16 | 81.3 |
Msa1186690 | MtrunA17_Chr5g0448761 | 47.107 | 121 | 62 | 1 | 213 | 333 | 423 | 541 | 9.76e-33 | 129 |
Msa1186690 | MtrunA17_Chr5g0448761 | 37.313 | 201 | 110 | 5 | 22 | 213 | 55 | 248 | 7.85e-31 | 124 |
Msa1186690 | MtrunA17_Chr2g0296781 | 48.413 | 126 | 63 | 1 | 213 | 338 | 348 | 471 | 1.45e-30 | 122 |
Msa1186690 | MtrunA17_Chr2g0296781 | 32.961 | 179 | 116 | 2 | 37 | 213 | 1 | 177 | 1.43e-23 | 102 |
Msa1186690 | MtrunA17_Chr1g0196541 | 45.000 | 140 | 75 | 1 | 199 | 338 | 334 | 471 | 1.91e-30 | 122 |
Msa1186690 | MtrunA17_Chr1g0196541 | 28.333 | 180 | 123 | 2 | 37 | 213 | 1 | 177 | 1.09e-16 | 81.6 |
Msa1186690 | MtrunA17_Chr6g0477261 | 47.619 | 126 | 64 | 1 | 213 | 338 | 237 | 360 | 6.29e-30 | 120 |
Msa1186690 | MtrunA17_Chr5g0448511 | 40.268 | 149 | 84 | 3 | 213 | 360 | 195 | 339 | 5.97e-28 | 114 |
Msa1186690 | MtrunA17_Chr5g0441581 | 38.255 | 149 | 89 | 2 | 208 | 356 | 371 | 516 | 7.76e-26 | 108 |
Msa1186690 | MtrunA17_Chr5g0441581 | 30.049 | 203 | 119 | 6 | 32 | 224 | 31 | 220 | 3.72e-16 | 80.1 |
Msa1186690 | MtrunA17_Chr3g0118611 | 45.082 | 122 | 63 | 2 | 210 | 331 | 298 | 415 | 1.78e-25 | 108 |
Msa1186690 | MtrunA17_Chr5g0440451 | 44.538 | 119 | 62 | 2 | 213 | 331 | 404 | 518 | 5.41e-25 | 106 |
Msa1186690 | MtrunA17_Chr5g0440451 | 29.012 | 162 | 100 | 5 | 16 | 173 | 26 | 176 | 6.49e-11 | 63.9 |
Msa1186690 | MtrunA17_Chr1g0202341 | 40.496 | 121 | 70 | 1 | 213 | 333 | 407 | 525 | 9.18e-23 | 99.8 |
Msa1186690 | MtrunA17_Chr1g0202341 | 29.858 | 211 | 129 | 5 | 16 | 210 | 25 | 232 | 3.27e-22 | 98.2 |
Msa1186690 | MtrunA17_Chr2g0291591 | 39.640 | 111 | 67 | 0 | 227 | 337 | 427 | 537 | 1.80e-21 | 95.9 |
Msa1186690 | MtrunA17_Chr2g0291591 | 28.571 | 210 | 145 | 2 | 27 | 231 | 58 | 267 | 1.31e-18 | 87.0 |
Msa1186690 | MtrunA17_Chr7g0258861 | 29.293 | 198 | 133 | 4 | 25 | 215 | 1 | 198 | 2.59e-21 | 93.2 |
Msa1186690 | MtrunA17_Chr2g0287651 | 31.915 | 188 | 111 | 5 | 35 | 210 | 77 | 259 | 3.08e-21 | 95.5 |
Msa1186690 | MtrunA17_Chr2g0287651 | 27.778 | 144 | 101 | 2 | 208 | 350 | 424 | 565 | 4.32e-13 | 70.9 |
Msa1186690 | MtrunA17_Chr7g0233911 | 39.474 | 114 | 64 | 1 | 25 | 133 | 26 | 139 | 6.68e-20 | 87.0 |
Msa1186690 | MtrunA17_Chr6g0451441 | 29.500 | 200 | 132 | 3 | 1 | 194 | 51 | 247 | 6.25e-19 | 87.8 |
Msa1186690 | MtrunA17_Chr1g0198761 | 40.336 | 119 | 69 | 1 | 213 | 331 | 414 | 530 | 2.35e-18 | 86.7 |
Msa1186690 | MtrunA17_Chr2g0324011 | 28.272 | 191 | 128 | 5 | 32 | 215 | 9 | 197 | 1.49e-17 | 84.0 |
Msa1186690 | MtrunA17_Chr2g0324011 | 30.899 | 178 | 110 | 5 | 157 | 331 | 316 | 483 | 2.18e-14 | 74.3 |
Msa1186690 | MtrunA17_Chr2g0329361 | 34.906 | 106 | 63 | 1 | 32 | 131 | 60 | 165 | 4.36e-17 | 80.1 |
Msa1186690 | MtrunA17_Chr3g0078041 | 35.780 | 109 | 65 | 1 | 28 | 131 | 45 | 153 | 4.16e-16 | 76.6 |
Msa1186690 | MtrunA17_Chr6g0458391 | 40.196 | 102 | 57 | 1 | 33 | 130 | 225 | 326 | 5.90e-15 | 76.3 |
Msa1186690 | MtrunA17_Chr6g0458391 | 33.333 | 120 | 76 | 2 | 33 | 148 | 91 | 210 | 3.32e-12 | 67.8 |
Msa1186690 | MtrunA17_Chr1g0203721 | 28.415 | 183 | 124 | 3 | 35 | 210 | 65 | 247 | 7.16e-15 | 76.3 |
Msa1186690 | MtrunA17_Chr3g0082121 | 29.630 | 189 | 119 | 4 | 33 | 215 | 43 | 223 | 1.47e-14 | 75.1 |
Msa1186690 | MtrunA17_Chr2g0308841 | 28.676 | 136 | 94 | 2 | 194 | 328 | 5 | 138 | 1.67e-14 | 72.8 |
Msa1186690 | MtrunA17_Chr2g0287061 | 41.176 | 119 | 65 | 2 | 213 | 331 | 501 | 614 | 2.38e-14 | 74.3 |
Msa1186690 | MtrunA17_Chr2g0287061 | 29.268 | 123 | 78 | 1 | 8 | 130 | 4 | 117 | 1.49e-11 | 65.9 |
Msa1186690 | MtrunA17_Chr2g0287061 | 33.645 | 107 | 62 | 1 | 24 | 130 | 174 | 271 | 2.89e-11 | 65.1 |
Msa1186690 | MtrunA17_Chr2g0276841 | 25.714 | 210 | 131 | 8 | 3 | 199 | 50 | 247 | 6.85e-14 | 73.2 |
Msa1186690 | MtrunA17_Chr2g0276841 | 30.435 | 138 | 92 | 2 | 194 | 331 | 415 | 548 | 2.78e-11 | 65.1 |
Msa1186690 | MtrunA17_Chr4g0033611 | 32.479 | 117 | 74 | 2 | 20 | 132 | 63 | 178 | 8.74e-13 | 67.8 |
Msa1186690 | MtrunA17_Chr8g0363841 | 24.607 | 191 | 139 | 3 | 25 | 210 | 9 | 199 | 1.91e-12 | 68.6 |
Msa1186690 | MtrunA17_Chr8g0363841 | 32.283 | 127 | 82 | 3 | 212 | 336 | 372 | 496 | 4.13e-11 | 64.3 |
Msa1186690 | MtrunA17_Chr1g0203051 | 28.169 | 142 | 99 | 2 | 188 | 328 | 406 | 545 | 2.92e-12 | 67.8 |
Msa1186690 | MtrunA17_Chr1g0203051 | 25.551 | 227 | 149 | 8 | 22 | 231 | 64 | 287 | 5.23e-12 | 67.0 |
Msa1186690 | MtrunA17_Chr2g0329421 | 29.927 | 137 | 83 | 4 | 29 | 153 | 23 | 158 | 6.28e-12 | 64.3 |
Msa1186690 | MtrunA17_Chr5g0431001 | 28.431 | 204 | 118 | 9 | 26 | 206 | 52 | 250 | 3.66e-11 | 64.3 |
Msa1186690 | MtrunA17_Chr2g0294841 | 28.729 | 181 | 111 | 6 | 33 | 197 | 45 | 223 | 4.71e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1186690 | AT4G15090.1 | 37.956 | 274 | 137 | 7 | 21 | 284 | 43 | 293 | 1.48e-51 | 184 |
Msa1186690 | AT4G15090.1 | 56.716 | 134 | 56 | 1 | 210 | 343 | 405 | 536 | 3.56e-44 | 163 |
Msa1186690 | AT4G15090.5 | 37.956 | 274 | 137 | 7 | 21 | 284 | 43 | 293 | 1.48e-51 | 184 |
Msa1186690 | AT4G15090.5 | 56.716 | 134 | 56 | 1 | 210 | 343 | 405 | 536 | 3.56e-44 | 163 |
Msa1186690 | AT4G15090.3 | 37.956 | 274 | 137 | 7 | 21 | 284 | 43 | 293 | 1.48e-51 | 184 |
Msa1186690 | AT4G15090.3 | 56.716 | 134 | 56 | 1 | 210 | 343 | 405 | 536 | 3.56e-44 | 163 |
Msa1186690 | AT4G15090.2 | 37.956 | 274 | 137 | 7 | 21 | 284 | 43 | 293 | 1.48e-51 | 184 |
Msa1186690 | AT4G15090.2 | 56.716 | 134 | 56 | 1 | 210 | 343 | 405 | 536 | 3.56e-44 | 163 |
Msa1186690 | AT4G15090.4 | 37.956 | 274 | 137 | 7 | 21 | 284 | 43 | 293 | 1.48e-51 | 184 |
Msa1186690 | AT4G15090.4 | 56.716 | 134 | 56 | 1 | 210 | 343 | 405 | 536 | 3.56e-44 | 163 |
Msa1186690 | AT1G76320.2 | 46.961 | 181 | 90 | 2 | 37 | 216 | 1 | 176 | 2.84e-45 | 165 |
Msa1186690 | AT1G76320.2 | 52.308 | 130 | 60 | 1 | 210 | 339 | 342 | 469 | 2.17e-43 | 160 |
Msa1186690 | AT1G76320.3 | 46.961 | 181 | 90 | 2 | 37 | 216 | 1 | 176 | 2.88e-45 | 165 |
Msa1186690 | AT1G76320.3 | 52.308 | 130 | 60 | 1 | 210 | 339 | 342 | 469 | 1.54e-43 | 160 |
Msa1186690 | AT1G76320.1 | 46.961 | 181 | 90 | 2 | 37 | 216 | 1 | 176 | 2.94e-45 | 165 |
Msa1186690 | AT1G76320.1 | 52.308 | 130 | 60 | 1 | 210 | 339 | 342 | 469 | 2.11e-43 | 160 |
Msa1186690 | AT1G76320.4 | 46.961 | 181 | 90 | 2 | 37 | 216 | 1 | 176 | 2.94e-45 | 165 |
Msa1186690 | AT1G76320.4 | 52.308 | 130 | 60 | 1 | 210 | 339 | 342 | 469 | 2.11e-43 | 160 |
Msa1186690 | AT3G22170.2 | 40.704 | 199 | 79 | 3 | 32 | 213 | 69 | 245 | 5.47e-43 | 159 |
Msa1186690 | AT3G22170.2 | 42.473 | 186 | 92 | 2 | 155 | 340 | 372 | 542 | 1.77e-41 | 155 |
Msa1186690 | AT3G22170.1 | 40.704 | 199 | 79 | 3 | 32 | 213 | 69 | 245 | 5.47e-43 | 159 |
Msa1186690 | AT3G22170.1 | 42.473 | 186 | 92 | 2 | 155 | 340 | 372 | 542 | 1.77e-41 | 155 |
Msa1186690 | AT4G38180.1 | 50.000 | 124 | 60 | 1 | 210 | 333 | 429 | 550 | 9.34e-36 | 138 |
Msa1186690 | AT4G38180.1 | 36.842 | 190 | 111 | 3 | 32 | 213 | 72 | 260 | 4.12e-31 | 125 |
Msa1186690 | AT4G19990.1 | 51.163 | 129 | 61 | 1 | 210 | 338 | 296 | 422 | 1.52e-35 | 137 |
Msa1186690 | AT4G19990.1 | 38.554 | 83 | 34 | 1 | 70 | 135 | 1 | 83 | 1.26e-11 | 66.6 |
Msa1186690 | AT4G19990.5 | 51.163 | 129 | 61 | 1 | 210 | 338 | 353 | 479 | 1.60e-35 | 137 |
Msa1186690 | AT4G19990.5 | 45.299 | 117 | 47 | 1 | 36 | 135 | 24 | 140 | 1.63e-25 | 108 |
Msa1186690 | AT4G19990.3 | 51.163 | 129 | 61 | 1 | 210 | 338 | 353 | 479 | 1.60e-35 | 137 |
Msa1186690 | AT4G19990.3 | 45.299 | 117 | 47 | 1 | 36 | 135 | 24 | 140 | 1.38e-25 | 108 |
Msa1186690 | AT4G19990.4 | 51.163 | 129 | 61 | 1 | 210 | 338 | 353 | 479 | 1.60e-35 | 137 |
Msa1186690 | AT4G19990.4 | 45.299 | 117 | 47 | 1 | 36 | 135 | 24 | 140 | 1.38e-25 | 108 |
Msa1186690 | AT4G19990.6 | 51.163 | 129 | 61 | 1 | 210 | 338 | 353 | 479 | 1.74e-35 | 137 |
Msa1186690 | AT4G19990.6 | 45.299 | 117 | 47 | 1 | 36 | 135 | 24 | 140 | 1.61e-25 | 108 |
Msa1186690 | AT4G19990.2 | 51.163 | 129 | 61 | 1 | 210 | 338 | 353 | 479 | 1.74e-35 | 137 |
Msa1186690 | AT4G19990.2 | 45.299 | 117 | 47 | 1 | 36 | 135 | 24 | 140 | 1.61e-25 | 108 |
Msa1186690 | AT4G19990.7 | 51.163 | 129 | 61 | 1 | 210 | 338 | 367 | 493 | 1.94e-35 | 137 |
Msa1186690 | AT4G19990.7 | 45.299 | 117 | 47 | 1 | 36 | 135 | 38 | 154 | 1.45e-25 | 108 |
Msa1186690 | AT2G32250.5 | 63.265 | 98 | 35 | 1 | 36 | 132 | 41 | 138 | 7.89e-35 | 135 |
Msa1186690 | AT2G32250.5 | 42.969 | 128 | 71 | 1 | 213 | 340 | 352 | 477 | 7.64e-26 | 109 |
Msa1186690 | AT2G32250.2 | 63.265 | 98 | 35 | 1 | 36 | 132 | 41 | 138 | 8.94e-35 | 135 |
Msa1186690 | AT2G32250.2 | 42.969 | 128 | 71 | 1 | 213 | 340 | 352 | 477 | 8.26e-26 | 109 |
Msa1186690 | AT2G32250.4 | 63.265 | 98 | 35 | 1 | 36 | 132 | 41 | 138 | 8.94e-35 | 135 |
Msa1186690 | AT2G32250.4 | 42.969 | 128 | 71 | 1 | 213 | 340 | 352 | 477 | 8.26e-26 | 109 |
Msa1186690 | AT2G32250.6 | 63.265 | 98 | 35 | 1 | 36 | 132 | 41 | 138 | 9.05e-35 | 135 |
Msa1186690 | AT2G32250.6 | 42.969 | 128 | 71 | 1 | 213 | 340 | 352 | 477 | 7.74e-26 | 109 |
Msa1186690 | AT2G32250.1 | 63.265 | 98 | 35 | 1 | 36 | 132 | 41 | 138 | 9.05e-35 | 135 |
Msa1186690 | AT2G32250.1 | 42.969 | 128 | 71 | 1 | 213 | 340 | 352 | 477 | 7.74e-26 | 109 |
Msa1186690 | AT2G32250.3 | 63.265 | 98 | 35 | 1 | 36 | 132 | 41 | 138 | 9.05e-35 | 135 |
Msa1186690 | AT2G32250.3 | 42.969 | 128 | 71 | 1 | 213 | 340 | 352 | 477 | 7.74e-26 | 109 |
Msa1186690 | AT2G32250.8 | 62.887 | 97 | 35 | 1 | 37 | 132 | 1 | 97 | 6.80e-34 | 133 |
Msa1186690 | AT2G32250.8 | 42.969 | 128 | 71 | 1 | 213 | 340 | 311 | 436 | 8.33e-26 | 109 |
Msa1186690 | AT2G32250.7 | 62.887 | 97 | 35 | 1 | 37 | 132 | 1 | 97 | 6.95e-34 | 133 |
Msa1186690 | AT2G32250.7 | 42.969 | 128 | 71 | 1 | 213 | 340 | 311 | 436 | 8.50e-26 | 109 |
Msa1186690 | AT1G52520.1 | 41.135 | 141 | 80 | 2 | 213 | 352 | 428 | 566 | 3.27e-28 | 116 |
Msa1186690 | AT1G52520.1 | 28.319 | 226 | 139 | 9 | 26 | 243 | 78 | 288 | 5.18e-14 | 73.9 |
Msa1186690 | AT4G38170.1 | 39.496 | 119 | 70 | 1 | 213 | 331 | 197 | 313 | 1.78e-24 | 105 |
Msa1186690 | AT2G27110.2 | 43.333 | 120 | 64 | 2 | 213 | 332 | 379 | 494 | 4.82e-24 | 104 |
Msa1186690 | AT2G27110.1 | 43.333 | 120 | 64 | 2 | 213 | 332 | 379 | 494 | 4.82e-24 | 104 |
Msa1186690 | AT2G27110.3 | 43.697 | 119 | 63 | 2 | 213 | 331 | 234 | 348 | 5.05e-24 | 103 |
Msa1186690 | AT1G80010.1 | 35.433 | 127 | 79 | 2 | 212 | 337 | 452 | 576 | 1.52e-19 | 90.5 |
Msa1186690 | AT1G80010.1 | 30.622 | 209 | 134 | 4 | 14 | 213 | 76 | 282 | 4.61e-15 | 77.0 |
Msa1186690 | AT5G18960.2 | 39.167 | 120 | 68 | 2 | 213 | 332 | 529 | 643 | 2.11e-19 | 90.1 |
Msa1186690 | AT5G18960.2 | 36.634 | 101 | 55 | 1 | 32 | 132 | 210 | 301 | 7.72e-12 | 67.0 |
Msa1186690 | AT5G18960.1 | 39.167 | 120 | 68 | 2 | 213 | 332 | 529 | 643 | 2.11e-19 | 90.1 |
Msa1186690 | AT5G18960.1 | 36.634 | 101 | 55 | 1 | 32 | 132 | 210 | 301 | 7.72e-12 | 67.0 |
Msa1186690 | AT3G06250.2 | 35.833 | 120 | 72 | 2 | 213 | 332 | 505 | 619 | 2.22e-17 | 84.3 |
Msa1186690 | AT3G06250.2 | 35.644 | 101 | 56 | 1 | 32 | 132 | 189 | 280 | 1.77e-11 | 66.2 |
Msa1186690 | AT3G06250.1 | 35.833 | 120 | 72 | 2 | 213 | 332 | 505 | 619 | 2.22e-17 | 84.3 |
Msa1186690 | AT3G06250.1 | 35.644 | 101 | 56 | 1 | 32 | 132 | 189 | 280 | 1.77e-11 | 66.2 |
Msa1186690 | AT3G06250.3 | 35.833 | 120 | 72 | 2 | 213 | 332 | 505 | 619 | 2.22e-17 | 84.3 |
Msa1186690 | AT3G06250.3 | 35.644 | 101 | 56 | 1 | 32 | 132 | 189 | 280 | 1.77e-11 | 66.2 |
Msa1186690 | AT3G07500.1 | 36.937 | 111 | 66 | 1 | 26 | 132 | 26 | 136 | 1.03e-14 | 72.8 |
Msa1186690 | AT2G43280.1 | 32.692 | 104 | 65 | 1 | 32 | 130 | 21 | 124 | 1.53e-14 | 72.4 |
Msa1186690 | AT3G59470.3 | 33.913 | 115 | 71 | 2 | 22 | 132 | 59 | 172 | 3.14e-14 | 72.0 |
Msa1186690 | AT3G59470.1 | 33.913 | 115 | 71 | 2 | 22 | 132 | 59 | 172 | 3.14e-14 | 72.0 |
Msa1186690 | AT3G59470.2 | 33.913 | 115 | 71 | 2 | 22 | 132 | 71 | 184 | 3.51e-14 | 72.4 |
Msa1186690 | AT4G12850.2 | 35.780 | 109 | 66 | 2 | 23 | 130 | 4 | 109 | 4.03e-14 | 69.3 |
Msa1186690 | AT4G12850.4 | 35.780 | 109 | 66 | 2 | 23 | 130 | 4 | 109 | 5.06e-14 | 68.9 |
Msa1186690 | AT4G12850.1 | 35.780 | 109 | 66 | 2 | 23 | 130 | 4 | 109 | 8.30e-14 | 69.7 |
Msa1186690 | AT1G10240.2 | 25.238 | 210 | 137 | 7 | 25 | 221 | 40 | 242 | 1.65e-11 | 66.2 |
Msa1186690 | AT1G10240.2 | 27.536 | 138 | 81 | 2 | 209 | 332 | 395 | 527 | 3.69e-11 | 65.1 |
Msa1186690 | AT1G10240.1 | 25.238 | 210 | 137 | 7 | 25 | 221 | 40 | 242 | 1.65e-11 | 66.2 |
Msa1186690 | AT1G10240.1 | 27.536 | 138 | 81 | 2 | 209 | 332 | 395 | 527 | 3.69e-11 | 65.1 |
Find 55 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATATTCGACTTTGGAAAT+AGG | 0.174949 | 8_1:+25458753 | Msa1186690:CDS |
AAAGAAGATGTGATGGAAAA+TGG | 0.230746 | 8_1:+25457515 | Msa1186690:CDS |
GTTGAAATTACGGGATTATC+TGG | 0.272233 | 8_1:+25458687 | Msa1186690:CDS |
ATGAAGTTGCTTTGGAAGAT+AGG | 0.282489 | 8_1:+25458541 | Msa1186690:CDS |
CTCATATCCTCCGTGTTGTT+TGG | 0.325718 | 8_1:-25457695 | None:intergenic |
ATTTCAACTATCAGACTTAG+AGG | 0.337863 | 8_1:+25458350 | Msa1186690:CDS |
AATATTCGACTTTGGAAATA+GGG | 0.339618 | 8_1:+25458754 | Msa1186690:CDS |
ATCATATGTTGGTGATTTAG+AGG | 0.360736 | 8_1:+25457243 | Msa1186690:CDS |
CGTCGTTTGAATTTAGAATC+TGG | 0.368832 | 8_1:+25457766 | Msa1186690:CDS |
ATATGAGAAAGTTGGTTGCT+TGG | 0.385751 | 8_1:+25457711 | Msa1186690:CDS |
AAGTTCCAAGTTGAAATTAC+GGG | 0.388019 | 8_1:+25458678 | Msa1186690:CDS |
AAAGTATCTTTCATGTAAAC+AGG | 0.390769 | 8_1:-25458417 | None:intergenic |
AAAGTTCCAAGTTGAAATTA+CGG | 0.393399 | 8_1:+25458677 | Msa1186690:CDS |
TATGCTAAAAGTGTCGGATT+TGG | 0.411257 | 8_1:+25457340 | Msa1186690:CDS |
GGAAAATAATGTGCATATGT+TGG | 0.418435 | 8_1:-25457580 | None:intergenic |
ATTGACATTTGCTTCTCAAA+AGG | 0.424118 | 8_1:-25458630 | None:intergenic |
GAAAATAATGTGCATATGTT+GGG | 0.428333 | 8_1:-25457579 | None:intergenic |
AATGTTCAACAACCTTCTCT+TGG | 0.431668 | 8_1:+25457271 | Msa1186690:CDS |
AACATATGATTCATTATTGA+CGG | 0.433811 | 8_1:-25457230 | None:intergenic |
ATATGAAGAACGTAAACATT+GGG | 0.435933 | 8_1:+25458392 | Msa1186690:CDS |
TGTTAGAAATTATTTAGATA+AGG | 0.447109 | 8_1:+25457741 | Msa1186690:CDS |
AAATATGCTTGCACACGATA+CGG | 0.458472 | 8_1:+25457418 | Msa1186690:CDS |
TGAAGTTGCTTTGGAAGATA+GGG | 0.473723 | 8_1:+25458542 | Msa1186690:CDS |
TCAACAACCTTCTCTTGGAA+TGG | 0.475525 | 8_1:+25457276 | Msa1186690:CDS |
AAAGTCGAATATTGTAAAAG+AGG | 0.485696 | 8_1:-25458744 | None:intergenic |
AAATCCACGTCCTTGTTTGA+AGG | 0.490399 | 8_1:+25457465 | Msa1186690:CDS |
AAGAAGATGTGATGGAAAAT+GGG | 0.500802 | 8_1:+25457516 | Msa1186690:CDS |
CAACTATCAGACTTAGAGGA+TGG | 0.506062 | 8_1:+25458354 | Msa1186690:CDS |
AATATGCTTGCACACGATAC+GGG | 0.514926 | 8_1:+25457419 | Msa1186690:CDS |
TGGAGATGCAAATGCAATGC+TGG | 0.521188 | 8_1:+25457786 | Msa1186690:CDS |
GTCAATAATGAATCATATGT+TGG | 0.522661 | 8_1:+25457232 | Msa1186690:CDS |
CATATTAAAAGAAGATGTGA+TGG | 0.530592 | 8_1:+25457508 | Msa1186690:CDS |
TATATGAAGAACGTAAACAT+TGG | 0.531034 | 8_1:+25458391 | Msa1186690:CDS |
TTGAAGGTGAAATGTGAGGC+TGG | 0.535257 | 8_1:+25457481 | Msa1186690:CDS |
ATTTGCTTCTCAAAAGGTGA+TGG | 0.540522 | 8_1:-25458624 | None:intergenic |
TCAAATTCCATTCCAAGAGA+AGG | 0.547857 | 8_1:-25457283 | None:intergenic |
TTATTGATGGTTCTATGGCA+AGG | 0.554474 | 8_1:-25457601 | None:intergenic |
GTTCAATATGCTAAAAGTGT+CGG | 0.555277 | 8_1:+25457334 | Msa1186690:CDS |
TCACATTTCACCTTCAAACA+AGG | 0.563933 | 8_1:-25457475 | None:intergenic |
TTCACCTTCAAACAAGGACG+TGG | 0.568797 | 8_1:-25457469 | None:intergenic |
CACGGAGGATATGAGAAAGT+TGG | 0.568866 | 8_1:+25457703 | Msa1186690:CDS |
AACTATCAGACTTAGAGGAT+GGG | 0.570196 | 8_1:+25458355 | Msa1186690:CDS |
ATTGAAACTTTGCAACATGT+TGG | 0.575416 | 8_1:+25457640 | Msa1186690:CDS |
ATAATCCCGTAATTTCAACT+TGG | 0.590214 | 8_1:-25458683 | None:intergenic |
TGTGATCTTTGATGAAGCCA+TGG | 0.603124 | 8_1:-25457543 | None:intergenic |
TATCAGACTTAGAGGATGGG+TGG | 0.609558 | 8_1:+25458358 | Msa1186690:CDS |
TCCGTGTTGTTTGGCCATTG+TGG | 0.622234 | 8_1:-25457686 | None:intergenic |
GCCACAATGGCCAAACAACA+CGG | 0.643363 | 8_1:+25457685 | Msa1186690:CDS |
GATGGAAAATGGGTGGTCCA+TGG | 0.647834 | 8_1:+25457526 | Msa1186690:CDS |
AAGCAAACTTTATGCCACAA+TGG | 0.656655 | 8_1:+25457672 | Msa1186690:CDS |
TTGTTTGAAGGTGAAATGTG+AGG | 0.676547 | 8_1:+25457477 | Msa1186690:CDS |
CAGATTCTAAATTCAAACGA+CGG | 0.687984 | 8_1:-25457765 | None:intergenic |
TTATCTGGATGTCATCTCAG+AGG | 0.690630 | 8_1:+25458702 | Msa1186690:CDS |
AAGATGTGATGGAAAATGGG+TGG | 0.757314 | 8_1:+25457519 | Msa1186690:CDS |
ACAATGGCCAAACAACACGG+AGG | 0.791386 | 8_1:+25457688 | Msa1186690:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTTAGAAATTATTTAGATA+AGG | + | chr8_1:25457741-25457760 | Msa1186690:CDS | 15.0% |
!! | TGTTAGAAATTATTTAGATA+AGG | + | chr8_1:25457741-25457760 | Msa1186690:CDS | 15.0% |
!! | AACATATGATTCATTATTGA+CGG | - | chr8_1:25457233-25457252 | None:intergenic | 20.0% |
!!! | ATTCTCTAGAAATTTTTGAA+CGG | - | chr8_1:25457387-25457406 | None:intergenic | 20.0% |
!!! | ATTCTTTTATGCATTTGATT+TGG | + | chr8_1:25457843-25457862 | Msa1186690:intron | 20.0% |
!!! | TCGTGTAAAAAATGTATTTT+GGG | + | chr8_1:25457876-25457895 | Msa1186690:intron | 20.0% |
!! | AAGAAATAATGAAGATTTCA+TGG | + | chr8_1:25458251-25458270 | Msa1186690:intron | 20.0% |
!! | AGAAATAATGAAGATTTCAT+GGG | + | chr8_1:25458252-25458271 | Msa1186690:intron | 20.0% |
!!! | TCTTTTTTTGACAAATATGT+AGG | + | chr8_1:25458483-25458502 | Msa1186690:CDS | 20.0% |
!! | AACATATGATTCATTATTGA+CGG | - | chr8_1:25457233-25457252 | None:intergenic | 20.0% |
!!! | ATTCTCTAGAAATTTTTGAA+CGG | - | chr8_1:25457387-25457406 | None:intergenic | 20.0% |
!!! | ATTCTTTTATGCATTTGATT+TGG | + | chr8_1:25457843-25457862 | Msa1186690:intron | 20.0% |
!!! | TCGTGTAAAAAATGTATTTT+GGG | + | chr8_1:25457876-25457895 | Msa1186690:intron | 20.0% |
!! | AAGAAATAATGAAGATTTCA+TGG | + | chr8_1:25458251-25458270 | Msa1186690:intron | 20.0% |
!! | AGAAATAATGAAGATTTCAT+GGG | + | chr8_1:25458252-25458271 | Msa1186690:intron | 20.0% |
!!! | TCTTTTTTTGACAAATATGT+AGG | + | chr8_1:25458483-25458502 | Msa1186690:CDS | 20.0% |
!! | TGTTCTTCATTTTCATCAAT+GGG | - | chr8_1:25457196-25457215 | None:intergenic | 25.0% |
!! | ATGTTCTTCATTTTCATCAA+TGG | - | chr8_1:25457197-25457216 | None:intergenic | 25.0% |
! | GTCAATAATGAATCATATGT+TGG | + | chr8_1:25457232-25457251 | Msa1186690:CDS | 25.0% |
! | CATATTAAAAGAAGATGTGA+TGG | + | chr8_1:25457508-25457527 | Msa1186690:CDS | 25.0% |
! | GAAAATAATGTGCATATGTT+GGG | - | chr8_1:25457582-25457601 | None:intergenic | 25.0% |
!! | GTCGTGTAAAAAATGTATTT+TGG | + | chr8_1:25457875-25457894 | Msa1186690:intron | 25.0% |
!!! | TGTAAAAAATGTATTTTGGG+TGG | + | chr8_1:25457879-25457898 | Msa1186690:intron | 25.0% |
! | TGTGATATATGTAGTATCAA+AGG | - | chr8_1:25457950-25457969 | None:intergenic | 25.0% |
!! | TACAACAGTTTGAAGTTAAA+TGG | + | chr8_1:25458310-25458329 | Msa1186690:intron | 25.0% |
!! | ACAACAGTTTGAAGTTAAAT+GGG | + | chr8_1:25458311-25458330 | Msa1186690:intron | 25.0% |
! | TATATGAAGAACGTAAACAT+TGG | + | chr8_1:25458391-25458410 | Msa1186690:CDS | 25.0% |
! | ATATGAAGAACGTAAACATT+GGG | + | chr8_1:25458392-25458411 | Msa1186690:CDS | 25.0% |
!! | AAAGTATCTTTCATGTAAAC+AGG | - | chr8_1:25458420-25458439 | None:intergenic | 25.0% |
!!! | ATGAAAGATACTTTTTTCAG+TGG | + | chr8_1:25458426-25458445 | Msa1186690:CDS | 25.0% |
! | TGAAAAATATGAAGTTGCTT+TGG | + | chr8_1:25458533-25458552 | Msa1186690:CDS | 25.0% |
!! | AAAGTTCCAAGTTGAAATTA+CGG | + | chr8_1:25458677-25458696 | Msa1186690:CDS | 25.0% |
! | AAAGTCGAATATTGTAAAAG+AGG | - | chr8_1:25458747-25458766 | None:intergenic | 25.0% |
!! | TCTTTTACAATATTCGACTT+TGG | + | chr8_1:25458746-25458765 | Msa1186690:CDS | 25.0% |
!! | AATATTCGACTTTGGAAATA+GGG | + | chr8_1:25458754-25458773 | Msa1186690:CDS | 25.0% |
!! | TGTTCTTCATTTTCATCAAT+GGG | - | chr8_1:25457196-25457215 | None:intergenic | 25.0% |
!! | ATGTTCTTCATTTTCATCAA+TGG | - | chr8_1:25457197-25457216 | None:intergenic | 25.0% |
! | GTCAATAATGAATCATATGT+TGG | + | chr8_1:25457232-25457251 | Msa1186690:CDS | 25.0% |
! | CATATTAAAAGAAGATGTGA+TGG | + | chr8_1:25457508-25457527 | Msa1186690:CDS | 25.0% |
! | GAAAATAATGTGCATATGTT+GGG | - | chr8_1:25457582-25457601 | None:intergenic | 25.0% |
!! | GTCGTGTAAAAAATGTATTT+TGG | + | chr8_1:25457875-25457894 | Msa1186690:intron | 25.0% |
!!! | TGTAAAAAATGTATTTTGGG+TGG | + | chr8_1:25457879-25457898 | Msa1186690:intron | 25.0% |
! | TGTGATATATGTAGTATCAA+AGG | - | chr8_1:25457950-25457969 | None:intergenic | 25.0% |
!! | TACAACAGTTTGAAGTTAAA+TGG | + | chr8_1:25458310-25458329 | Msa1186690:intron | 25.0% |
!! | ACAACAGTTTGAAGTTAAAT+GGG | + | chr8_1:25458311-25458330 | Msa1186690:intron | 25.0% |
! | TATATGAAGAACGTAAACAT+TGG | + | chr8_1:25458391-25458410 | Msa1186690:CDS | 25.0% |
! | ATATGAAGAACGTAAACATT+GGG | + | chr8_1:25458392-25458411 | Msa1186690:CDS | 25.0% |
!! | AAAGTATCTTTCATGTAAAC+AGG | - | chr8_1:25458420-25458439 | None:intergenic | 25.0% |
!!! | ATGAAAGATACTTTTTTCAG+TGG | + | chr8_1:25458426-25458445 | Msa1186690:CDS | 25.0% |
! | TGAAAAATATGAAGTTGCTT+TGG | + | chr8_1:25458533-25458552 | Msa1186690:CDS | 25.0% |
!! | AAAGTTCCAAGTTGAAATTA+CGG | + | chr8_1:25458677-25458696 | Msa1186690:CDS | 25.0% |
! | AAAGTCGAATATTGTAAAAG+AGG | - | chr8_1:25458747-25458766 | None:intergenic | 25.0% |
!! | TCTTTTACAATATTCGACTT+TGG | + | chr8_1:25458746-25458765 | Msa1186690:CDS | 25.0% |
!! | AATATTCGACTTTGGAAATA+GGG | + | chr8_1:25458754-25458773 | Msa1186690:CDS | 25.0% |
!! | ATCATATGTTGGTGATTTAG+AGG | + | chr8_1:25457243-25457262 | Msa1186690:CDS | 30.0% |
! | GTTCAATATGCTAAAAGTGT+CGG | + | chr8_1:25457334-25457353 | Msa1186690:CDS | 30.0% |
! | AAAGAAGATGTGATGGAAAA+TGG | + | chr8_1:25457515-25457534 | Msa1186690:CDS | 30.0% |
! | AAGAAGATGTGATGGAAAAT+GGG | + | chr8_1:25457516-25457535 | Msa1186690:CDS | 30.0% |
GGAAAATAATGTGCATATGT+TGG | - | chr8_1:25457583-25457602 | None:intergenic | 30.0% | |
!!! | GAGTTTTATTGATGGTTCTA+TGG | - | chr8_1:25457609-25457628 | None:intergenic | 30.0% |
!!! | ATTCTGCTGAGTTTTATTGA+TGG | - | chr8_1:25457617-25457636 | None:intergenic | 30.0% |
ATTGAAACTTTGCAACATGT+TGG | + | chr8_1:25457640-25457659 | Msa1186690:CDS | 30.0% | |
CAGATTCTAAATTCAAACGA+CGG | - | chr8_1:25457768-25457787 | None:intergenic | 30.0% | |
!! | AAAAATGTATTTTGGGTGGA+TGG | + | chr8_1:25457883-25457902 | Msa1186690:intron | 30.0% |
AGAGATGATTATCAAGTGTT+TGG | + | chr8_1:25457913-25457932 | Msa1186690:intron | 30.0% | |
TGATTATTCACACCAATGAA+TGG | - | chr8_1:25457997-25458016 | None:intergenic | 30.0% | |
!! | TCAAATGGTTGATGAAAACA+TGG | + | chr8_1:25458073-25458092 | Msa1186690:intron | 30.0% |
TCTTTGGCATATACTTAGAA+AGG | + | chr8_1:25458203-25458222 | Msa1186690:intron | 30.0% | |
ATTTCAACTATCAGACTTAG+AGG | + | chr8_1:25458350-25458369 | Msa1186690:CDS | 30.0% | |
!!! | TGCATGCTGATTTTAATACA+TGG | + | chr8_1:25458577-25458596 | Msa1186690:CDS | 30.0% |
ATTGACATTTGCTTCTCAAA+AGG | - | chr8_1:25458633-25458652 | None:intergenic | 30.0% | |
! | AAGTTCCAAGTTGAAATTAC+GGG | + | chr8_1:25458678-25458697 | Msa1186690:CDS | 30.0% |
ATAATCCCGTAATTTCAACT+TGG | - | chr8_1:25458686-25458705 | None:intergenic | 30.0% | |
! | CAATATTCGACTTTGGAAAT+AGG | + | chr8_1:25458753-25458772 | Msa1186690:CDS | 30.0% |
!! | ATCATATGTTGGTGATTTAG+AGG | + | chr8_1:25457243-25457262 | Msa1186690:CDS | 30.0% |
! | GTTCAATATGCTAAAAGTGT+CGG | + | chr8_1:25457334-25457353 | Msa1186690:CDS | 30.0% |
! | AAAGAAGATGTGATGGAAAA+TGG | + | chr8_1:25457515-25457534 | Msa1186690:CDS | 30.0% |
! | AAGAAGATGTGATGGAAAAT+GGG | + | chr8_1:25457516-25457535 | Msa1186690:CDS | 30.0% |
GGAAAATAATGTGCATATGT+TGG | - | chr8_1:25457583-25457602 | None:intergenic | 30.0% | |
!!! | GAGTTTTATTGATGGTTCTA+TGG | - | chr8_1:25457609-25457628 | None:intergenic | 30.0% |
!!! | ATTCTGCTGAGTTTTATTGA+TGG | - | chr8_1:25457617-25457636 | None:intergenic | 30.0% |
ATTGAAACTTTGCAACATGT+TGG | + | chr8_1:25457640-25457659 | Msa1186690:CDS | 30.0% | |
CAGATTCTAAATTCAAACGA+CGG | - | chr8_1:25457768-25457787 | None:intergenic | 30.0% | |
!! | AAAAATGTATTTTGGGTGGA+TGG | + | chr8_1:25457883-25457902 | Msa1186690:intron | 30.0% |
AGAGATGATTATCAAGTGTT+TGG | + | chr8_1:25457913-25457932 | Msa1186690:intron | 30.0% | |
TGATTATTCACACCAATGAA+TGG | - | chr8_1:25457997-25458016 | None:intergenic | 30.0% | |
!! | TCAAATGGTTGATGAAAACA+TGG | + | chr8_1:25458073-25458092 | Msa1186690:intron | 30.0% |
TCTTTGGCATATACTTAGAA+AGG | + | chr8_1:25458203-25458222 | Msa1186690:intron | 30.0% | |
ATTTCAACTATCAGACTTAG+AGG | + | chr8_1:25458350-25458369 | Msa1186690:CDS | 30.0% | |
!!! | TGCATGCTGATTTTAATACA+TGG | + | chr8_1:25458577-25458596 | Msa1186690:CDS | 30.0% |
ATTGACATTTGCTTCTCAAA+AGG | - | chr8_1:25458633-25458652 | None:intergenic | 30.0% | |
! | AAGTTCCAAGTTGAAATTAC+GGG | + | chr8_1:25458678-25458697 | Msa1186690:CDS | 30.0% |
ATAATCCCGTAATTTCAACT+TGG | - | chr8_1:25458686-25458705 | None:intergenic | 30.0% | |
! | CAATATTCGACTTTGGAAAT+AGG | + | chr8_1:25458753-25458772 | Msa1186690:CDS | 30.0% |
AATGTTCAACAACCTTCTCT+TGG | + | chr8_1:25457271-25457290 | Msa1186690:CDS | 35.0% | |
TCAAATTCCATTCCAAGAGA+AGG | - | chr8_1:25457286-25457305 | None:intergenic | 35.0% | |
!! | TATGCTAAAAGTGTCGGATT+TGG | + | chr8_1:25457340-25457359 | Msa1186690:CDS | 35.0% |
AAATATGCTTGCACACGATA+CGG | + | chr8_1:25457418-25457437 | Msa1186690:CDS | 35.0% | |
TCACATTTCACCTTCAAACA+AGG | - | chr8_1:25457478-25457497 | None:intergenic | 35.0% | |
TTGTTTGAAGGTGAAATGTG+AGG | + | chr8_1:25457477-25457496 | Msa1186690:CDS | 35.0% | |
! | TTATTGATGGTTCTATGGCA+AGG | - | chr8_1:25457604-25457623 | None:intergenic | 35.0% |
AAGCAAACTTTATGCCACAA+TGG | + | chr8_1:25457672-25457691 | Msa1186690:CDS | 35.0% | |
! | ATATGAGAAAGTTGGTTGCT+TGG | + | chr8_1:25457711-25457730 | Msa1186690:CDS | 35.0% |
! | CGTCGTTTGAATTTAGAATC+TGG | + | chr8_1:25457766-25457785 | Msa1186690:CDS | 35.0% |
!! | GCATTTGATTTGGATGATGA+TGG | + | chr8_1:25457853-25457872 | Msa1186690:intron | 35.0% |
!! | AGACTTCTGAGACTTTCAAA+TGG | + | chr8_1:25458058-25458077 | Msa1186690:intron | 35.0% |
! | GTTGATGAAAACATGGCTTA+AGG | + | chr8_1:25458080-25458099 | Msa1186690:intron | 35.0% |
AAAACATGGCTTAAGGCAAT+GGG | + | chr8_1:25458087-25458106 | Msa1186690:intron | 35.0% | |
TCAGTTATCATTGCATTTGG+AGG | - | chr8_1:25458120-25458139 | None:intergenic | 35.0% | |
TGGTCAGTTATCATTGCATT+TGG | - | chr8_1:25458123-25458142 | None:intergenic | 35.0% | |
AATGAAAGTGGCTATTGAAG+AGG | + | chr8_1:25458152-25458171 | Msa1186690:intron | 35.0% | |
TGAAGTTAAATGGGCAGAAA+TGG | + | chr8_1:25458320-25458339 | Msa1186690:intron | 35.0% | |
AACTATCAGACTTAGAGGAT+GGG | + | chr8_1:25458355-25458374 | Msa1186690:CDS | 35.0% | |
!! | ATGAAGTTGCTTTGGAAGAT+AGG | + | chr8_1:25458541-25458560 | Msa1186690:CDS | 35.0% |
!! | TGAAGTTGCTTTGGAAGATA+GGG | + | chr8_1:25458542-25458561 | Msa1186690:CDS | 35.0% |
!!! | CAAAAGGTGATGGAGTTTTA+AGG | - | chr8_1:25458617-25458636 | None:intergenic | 35.0% |
ATTTGCTTCTCAAAAGGTGA+TGG | - | chr8_1:25458627-25458646 | None:intergenic | 35.0% | |
GTTGAAATTACGGGATTATC+TGG | + | chr8_1:25458687-25458706 | Msa1186690:CDS | 35.0% | |
AATGTTCAACAACCTTCTCT+TGG | + | chr8_1:25457271-25457290 | Msa1186690:CDS | 35.0% | |
TCAAATTCCATTCCAAGAGA+AGG | - | chr8_1:25457286-25457305 | None:intergenic | 35.0% | |
!! | TATGCTAAAAGTGTCGGATT+TGG | + | chr8_1:25457340-25457359 | Msa1186690:CDS | 35.0% |
AAATATGCTTGCACACGATA+CGG | + | chr8_1:25457418-25457437 | Msa1186690:CDS | 35.0% | |
TCACATTTCACCTTCAAACA+AGG | - | chr8_1:25457478-25457497 | None:intergenic | 35.0% | |
TTGTTTGAAGGTGAAATGTG+AGG | + | chr8_1:25457477-25457496 | Msa1186690:CDS | 35.0% | |
! | TTATTGATGGTTCTATGGCA+AGG | - | chr8_1:25457604-25457623 | None:intergenic | 35.0% |
AAGCAAACTTTATGCCACAA+TGG | + | chr8_1:25457672-25457691 | Msa1186690:CDS | 35.0% | |
! | ATATGAGAAAGTTGGTTGCT+TGG | + | chr8_1:25457711-25457730 | Msa1186690:CDS | 35.0% |
! | CGTCGTTTGAATTTAGAATC+TGG | + | chr8_1:25457766-25457785 | Msa1186690:CDS | 35.0% |
!! | GCATTTGATTTGGATGATGA+TGG | + | chr8_1:25457853-25457872 | Msa1186690:intron | 35.0% |
!! | AGACTTCTGAGACTTTCAAA+TGG | + | chr8_1:25458058-25458077 | Msa1186690:intron | 35.0% |
! | GTTGATGAAAACATGGCTTA+AGG | + | chr8_1:25458080-25458099 | Msa1186690:intron | 35.0% |
AAAACATGGCTTAAGGCAAT+GGG | + | chr8_1:25458087-25458106 | Msa1186690:intron | 35.0% | |
TCAGTTATCATTGCATTTGG+AGG | - | chr8_1:25458120-25458139 | None:intergenic | 35.0% | |
TGGTCAGTTATCATTGCATT+TGG | - | chr8_1:25458123-25458142 | None:intergenic | 35.0% | |
AATGAAAGTGGCTATTGAAG+AGG | + | chr8_1:25458152-25458171 | Msa1186690:intron | 35.0% | |
TGAAGTTAAATGGGCAGAAA+TGG | + | chr8_1:25458320-25458339 | Msa1186690:intron | 35.0% | |
AACTATCAGACTTAGAGGAT+GGG | + | chr8_1:25458355-25458374 | Msa1186690:CDS | 35.0% | |
!! | ATGAAGTTGCTTTGGAAGAT+AGG | + | chr8_1:25458541-25458560 | Msa1186690:CDS | 35.0% |
!! | TGAAGTTGCTTTGGAAGATA+GGG | + | chr8_1:25458542-25458561 | Msa1186690:CDS | 35.0% |
!!! | CAAAAGGTGATGGAGTTTTA+AGG | - | chr8_1:25458617-25458636 | None:intergenic | 35.0% |
ATTTGCTTCTCAAAAGGTGA+TGG | - | chr8_1:25458627-25458646 | None:intergenic | 35.0% | |
GTTGAAATTACGGGATTATC+TGG | + | chr8_1:25458687-25458706 | Msa1186690:CDS | 35.0% | |
TCAACAACCTTCTCTTGGAA+TGG | + | chr8_1:25457276-25457295 | Msa1186690:CDS | 40.0% | |
!! | TGAACGGCGACTACTTTTAA+TGG | - | chr8_1:25457371-25457390 | None:intergenic | 40.0% |
AATATGCTTGCACACGATAC+GGG | + | chr8_1:25457419-25457438 | Msa1186690:CDS | 40.0% | |
! | AAATCCACGTCCTTGTTTGA+AGG | + | chr8_1:25457465-25457484 | Msa1186690:CDS | 40.0% |
! | AAGATGTGATGGAAAATGGG+TGG | + | chr8_1:25457519-25457538 | Msa1186690:CDS | 40.0% |
TGTGATCTTTGATGAAGCCA+TGG | - | chr8_1:25457546-25457565 | None:intergenic | 40.0% | |
!! | TGTATTTTGGGTGGATGGAA+AGG | + | chr8_1:25457888-25457907 | Msa1186690:intron | 40.0% |
!! | GTATTTTGGGTGGATGGAAA+GGG | + | chr8_1:25457889-25457908 | Msa1186690:intron | 40.0% |
! | ATGCCATTTGCTCCATTCAT+TGG | + | chr8_1:25457982-25458001 | Msa1186690:intron | 40.0% |
ACACCAATGAATGGAGCAAA+TGG | - | chr8_1:25457988-25458007 | None:intergenic | 40.0% | |
CACTTCCAGTCAAGATTACT+CGG | + | chr8_1:25458015-25458034 | Msa1186690:intron | 40.0% | |
GAAAACATGGCTTAAGGCAA+TGG | + | chr8_1:25458086-25458105 | Msa1186690:intron | 40.0% | |
CCACTTTCATTGATCTGTCT+TGG | - | chr8_1:25458143-25458162 | None:intergenic | 40.0% | |
CCAAGACAGATCAATGAAAG+TGG | + | chr8_1:25458140-25458159 | Msa1186690:intron | 40.0% | |
CAAAAACGATGTCGGGTATT+TGG | - | chr8_1:25458183-25458202 | None:intergenic | 40.0% | |
CCAAAGACAAAAACGATGTC+GGG | - | chr8_1:25458190-25458209 | None:intergenic | 40.0% | |
GCCAAAGACAAAAACGATGT+CGG | - | chr8_1:25458191-25458210 | None:intergenic | 40.0% | |
ATTACATGACCAAGCTTCTC+AGG | - | chr8_1:25458231-25458250 | None:intergenic | 40.0% | |
CAACTATCAGACTTAGAGGA+TGG | + | chr8_1:25458354-25458373 | Msa1186690:CDS | 40.0% | |
TTATCTGGATGTCATCTCAG+AGG | + | chr8_1:25458702-25458721 | Msa1186690:CDS | 40.0% | |
TCAACAACCTTCTCTTGGAA+TGG | + | chr8_1:25457276-25457295 | Msa1186690:CDS | 40.0% | |
!! | TGAACGGCGACTACTTTTAA+TGG | - | chr8_1:25457371-25457390 | None:intergenic | 40.0% |
AATATGCTTGCACACGATAC+GGG | + | chr8_1:25457419-25457438 | Msa1186690:CDS | 40.0% | |
! | AAATCCACGTCCTTGTTTGA+AGG | + | chr8_1:25457465-25457484 | Msa1186690:CDS | 40.0% |
! | AAGATGTGATGGAAAATGGG+TGG | + | chr8_1:25457519-25457538 | Msa1186690:CDS | 40.0% |
TGTGATCTTTGATGAAGCCA+TGG | - | chr8_1:25457546-25457565 | None:intergenic | 40.0% | |
!! | TGTATTTTGGGTGGATGGAA+AGG | + | chr8_1:25457888-25457907 | Msa1186690:intron | 40.0% |
!! | GTATTTTGGGTGGATGGAAA+GGG | + | chr8_1:25457889-25457908 | Msa1186690:intron | 40.0% |
! | ATGCCATTTGCTCCATTCAT+TGG | + | chr8_1:25457982-25458001 | Msa1186690:intron | 40.0% |
ACACCAATGAATGGAGCAAA+TGG | - | chr8_1:25457988-25458007 | None:intergenic | 40.0% | |
CACTTCCAGTCAAGATTACT+CGG | + | chr8_1:25458015-25458034 | Msa1186690:intron | 40.0% | |
GAAAACATGGCTTAAGGCAA+TGG | + | chr8_1:25458086-25458105 | Msa1186690:intron | 40.0% | |
CCACTTTCATTGATCTGTCT+TGG | - | chr8_1:25458143-25458162 | None:intergenic | 40.0% | |
CCAAGACAGATCAATGAAAG+TGG | + | chr8_1:25458140-25458159 | Msa1186690:intron | 40.0% | |
CAAAAACGATGTCGGGTATT+TGG | - | chr8_1:25458183-25458202 | None:intergenic | 40.0% | |
CCAAAGACAAAAACGATGTC+GGG | - | chr8_1:25458190-25458209 | None:intergenic | 40.0% | |
GCCAAAGACAAAAACGATGT+CGG | - | chr8_1:25458191-25458210 | None:intergenic | 40.0% | |
ATTACATGACCAAGCTTCTC+AGG | - | chr8_1:25458231-25458250 | None:intergenic | 40.0% | |
CAACTATCAGACTTAGAGGA+TGG | + | chr8_1:25458354-25458373 | Msa1186690:CDS | 40.0% | |
TTATCTGGATGTCATCTCAG+AGG | + | chr8_1:25458702-25458721 | Msa1186690:CDS | 40.0% | |
! | ACAAGGACGTGGATTTTGTG+CGG | - | chr8_1:25457461-25457480 | None:intergenic | 45.0% |
TTCACCTTCAAACAAGGACG+TGG | - | chr8_1:25457472-25457491 | None:intergenic | 45.0% | |
TTGAAGGTGAAATGTGAGGC+TGG | + | chr8_1:25457481-25457500 | Msa1186690:CDS | 45.0% | |
! | CTCATATCCTCCGTGTTGTT+TGG | - | chr8_1:25457698-25457717 | None:intergenic | 45.0% |
CACGGAGGATATGAGAAAGT+TGG | + | chr8_1:25457703-25457722 | Msa1186690:CDS | 45.0% | |
TGGAGATGCAAATGCAATGC+TGG | + | chr8_1:25457786-25457805 | Msa1186690:CDS | 45.0% | |
CACAACCGAGTAATCTTGAC+TGG | - | chr8_1:25458023-25458042 | None:intergenic | 45.0% | |
!! | CCCGACATCGTTTTTGTCTT+TGG | + | chr8_1:25458187-25458206 | Msa1186690:intron | 45.0% |
TATCAGACTTAGAGGATGGG+TGG | + | chr8_1:25458358-25458377 | Msa1186690:CDS | 45.0% | |
!!! | GGTGATGGAGTTTTAAGGAC+TGG | - | chr8_1:25458612-25458631 | None:intergenic | 45.0% |
! | ACAAGGACGTGGATTTTGTG+CGG | - | chr8_1:25457461-25457480 | None:intergenic | 45.0% |
TTCACCTTCAAACAAGGACG+TGG | - | chr8_1:25457472-25457491 | None:intergenic | 45.0% | |
TTGAAGGTGAAATGTGAGGC+TGG | + | chr8_1:25457481-25457500 | Msa1186690:CDS | 45.0% | |
! | CTCATATCCTCCGTGTTGTT+TGG | - | chr8_1:25457698-25457717 | None:intergenic | 45.0% |
CACGGAGGATATGAGAAAGT+TGG | + | chr8_1:25457703-25457722 | Msa1186690:CDS | 45.0% | |
TGGAGATGCAAATGCAATGC+TGG | + | chr8_1:25457786-25457805 | Msa1186690:CDS | 45.0% | |
CACAACCGAGTAATCTTGAC+TGG | - | chr8_1:25458023-25458042 | None:intergenic | 45.0% | |
!! | CCCGACATCGTTTTTGTCTT+TGG | + | chr8_1:25458187-25458206 | Msa1186690:intron | 45.0% |
TATCAGACTTAGAGGATGGG+TGG | + | chr8_1:25458358-25458377 | Msa1186690:CDS | 45.0% | |
!!! | GGTGATGGAGTTTTAAGGAC+TGG | - | chr8_1:25458612-25458631 | None:intergenic | 45.0% |
GATGGAAAATGGGTGGTCCA+TGG | + | chr8_1:25457526-25457545 | Msa1186690:CDS | 50.0% | |
GCCACAATGGCCAAACAACA+CGG | + | chr8_1:25457685-25457704 | Msa1186690:CDS | 50.0% | |
!! | TCCGTGTTGTTTGGCCATTG+TGG | - | chr8_1:25457689-25457708 | None:intergenic | 50.0% |
ACAATGGCCAAACAACACGG+AGG | + | chr8_1:25457688-25457707 | Msa1186690:CDS | 50.0% | |
ACATGGCTTAAGGCAATGGG+TGG | + | chr8_1:25458090-25458109 | Msa1186690:intron | 50.0% | |
CATGGCTTAAGGCAATGGGT+GGG | + | chr8_1:25458091-25458110 | Msa1186690:intron | 50.0% | |
!! | AGAAAGGTGCCTGAGAAGCT+TGG | + | chr8_1:25458219-25458238 | Msa1186690:intron | 50.0% |
GATGGAAAATGGGTGGTCCA+TGG | + | chr8_1:25457526-25457545 | Msa1186690:CDS | 50.0% | |
GCCACAATGGCCAAACAACA+CGG | + | chr8_1:25457685-25457704 | Msa1186690:CDS | 50.0% | |
!! | TCCGTGTTGTTTGGCCATTG+TGG | - | chr8_1:25457689-25457708 | None:intergenic | 50.0% |
ACAATGGCCAAACAACACGG+AGG | + | chr8_1:25457688-25457707 | Msa1186690:CDS | 50.0% | |
ACATGGCTTAAGGCAATGGG+TGG | + | chr8_1:25458090-25458109 | Msa1186690:intron | 50.0% | |
CATGGCTTAAGGCAATGGGT+GGG | + | chr8_1:25458091-25458110 | Msa1186690:intron | 50.0% | |
!! | AGAAAGGTGCCTGAGAAGCT+TGG | + | chr8_1:25458219-25458238 | Msa1186690:intron | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 25457187 | 25458791 | 25457187 | ID=Msa1186690;Name=Msa1186690 |
chr8_1 | mRNA | 25457187 | 25458791 | 25457187 | ID=Msa1186690-mRNA-1;Parent=Msa1186690;Name=Msa1186690-mRNA-1;_AED=0.23;_eAED=0.26;_QI=0|0|0|1|1|1|2|0|362 |
chr8_1 | exon | 25457187 | 25457820 | 25457187 | ID=Msa1186690-mRNA-1:exon:9098;Parent=Msa1186690-mRNA-1 |
chr8_1 | exon | 25458337 | 25458791 | 25458337 | ID=Msa1186690-mRNA-1:exon:9099;Parent=Msa1186690-mRNA-1 |
chr8_1 | CDS | 25457187 | 25457820 | 25457187 | ID=Msa1186690-mRNA-1:cds;Parent=Msa1186690-mRNA-1 |
chr8_1 | CDS | 25458337 | 25458791 | 25458337 | ID=Msa1186690-mRNA-1:cds;Parent=Msa1186690-mRNA-1 |
Gene Sequence |
Protein sequence |