Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1187610 | sp|Q9SZL8|FRS5_ARATH | 27.660 | 470 | 317 | 6 | 32 | 499 | 70 | 518 | 1.61e-55 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1187610 | D3YBB9 | 69.517 | 807 | 175 | 6 | 1 | 744 | 49 | 847 | 0.0 | 1133 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1187610 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1187610 | MtrunA17_Chr2g0324011 | 32.008 | 503 | 311 | 9 | 36 | 532 | 8 | 485 | 7.25e-89 | 291 |
| Msa1187610 | MtrunA17_Chr3g0082121 | 30.441 | 657 | 383 | 17 | 41 | 673 | 49 | 655 | 6.87e-83 | 278 |
| Msa1187610 | MtrunA17_Chr3g0088371 | 82.313 | 147 | 23 | 1 | 601 | 744 | 38 | 184 | 3.52e-77 | 246 |
| Msa1187610 | MtrunA17_Chr1g0202341 | 31.849 | 449 | 276 | 8 | 34 | 478 | 50 | 472 | 1.44e-66 | 233 |
| Msa1187610 | MtrunA17_Chr8g0363841 | 30.101 | 495 | 316 | 9 | 40 | 530 | 22 | 490 | 4.15e-65 | 229 |
| Msa1187610 | MtrunA17_Chr1g0164591 | 34.688 | 320 | 194 | 4 | 131 | 448 | 1 | 307 | 4.42e-61 | 208 |
| Msa1187610 | MtrunA17_Chr2g0296781 | 30.388 | 464 | 290 | 9 | 39 | 499 | 1 | 434 | 9.51e-60 | 215 |
| Msa1187610 | MtrunA17_Chr1g0203721 | 25.544 | 689 | 425 | 19 | 40 | 685 | 68 | 711 | 2.00e-57 | 210 |
| Msa1187610 | MtrunA17_Chr1g0172971 | 82.051 | 117 | 20 | 1 | 1 | 116 | 1 | 117 | 1.51e-55 | 199 |
| Msa1187610 | MtrunA17_Chr2g0287651 | 27.897 | 466 | 302 | 9 | 39 | 499 | 79 | 515 | 1.97e-54 | 201 |
| Msa1187610 | MtrunA17_Chr5g0448761 | 27.689 | 502 | 331 | 10 | 31 | 524 | 56 | 533 | 5.33e-54 | 199 |
| Msa1187610 | MtrunA17_Chr6g0477261 | 33.333 | 321 | 209 | 3 | 180 | 499 | 7 | 323 | 1.16e-53 | 196 |
| Msa1187610 | MtrunA17_Chr6g0458391 | 26.606 | 545 | 338 | 13 | 41 | 575 | 231 | 723 | 6.17e-53 | 196 |
| Msa1187610 | MtrunA17_Chr7g0258861 | 34.641 | 306 | 176 | 6 | 36 | 336 | 8 | 294 | 2.81e-52 | 184 |
| Msa1187610 | MtrunA17_Chr5g0441581 | 26.614 | 511 | 319 | 12 | 32 | 530 | 26 | 492 | 7.21e-49 | 183 |
| Msa1187610 | MtrunA17_Chr1g0198761 | 27.829 | 539 | 329 | 16 | 26 | 540 | 38 | 540 | 2.76e-46 | 176 |
| Msa1187610 | MtrunA17_Chr1g0196541 | 27.586 | 464 | 303 | 12 | 39 | 499 | 1 | 434 | 3.90e-46 | 176 |
| Msa1187610 | MtrunA17_Chr1g0203051 | 23.301 | 515 | 365 | 6 | 50 | 562 | 94 | 580 | 1.22e-45 | 173 |
| Msa1187610 | MtrunA17_Chr5g0440451 | 23.645 | 664 | 434 | 15 | 34 | 667 | 42 | 662 | 2.65e-44 | 172 |
| Msa1187610 | MtrunA17_Chr2g0276841 | 26.575 | 508 | 316 | 13 | 49 | 536 | 84 | 554 | 1.79e-42 | 164 |
| Msa1187610 | MtrunA17_Chr2g0329031 | 26.042 | 480 | 312 | 11 | 23 | 496 | 2 | 444 | 2.52e-42 | 164 |
| Msa1187610 | MtrunA17_Chr2g0291591 | 25.749 | 501 | 312 | 13 | 16 | 499 | 44 | 501 | 1.07e-41 | 160 |
| Msa1187610 | MtrunA17_Chr5g0431001 | 27.716 | 451 | 281 | 12 | 40 | 473 | 66 | 488 | 1.23e-41 | 159 |
| Msa1187610 | MtrunA17_Chr2g0290391 | 25.981 | 535 | 342 | 15 | 38 | 553 | 54 | 553 | 4.21e-41 | 160 |
| Msa1187610 | MtrunA17_Chr3g0118611 | 29.526 | 359 | 240 | 6 | 221 | 576 | 111 | 459 | 7.34e-41 | 160 |
| Msa1187610 | MtrunA17_Chr6g0475591 | 91.781 | 73 | 6 | 0 | 188 | 260 | 1 | 73 | 8.99e-41 | 143 |
| Msa1187610 | MtrunA17_Chr1g0207551 | 25.553 | 497 | 337 | 10 | 31 | 523 | 30 | 497 | 3.50e-39 | 155 |
| Msa1187610 | MtrunA17_Chr2g0294841 | 27.669 | 459 | 285 | 14 | 41 | 482 | 51 | 479 | 1.12e-35 | 144 |
| Msa1187610 | MtrunA17_Chr3g0080351 | 22.794 | 680 | 457 | 16 | 34 | 698 | 75 | 701 | 8.47e-35 | 142 |
| Msa1187610 | MtrunA17_Chr5g0448511 | 27.097 | 310 | 218 | 4 | 216 | 523 | 1 | 304 | 1.75e-34 | 139 |
| Msa1187610 | MtrunA17_Chr2g0287061 | 24.950 | 501 | 302 | 15 | 41 | 536 | 189 | 620 | 2.54e-34 | 140 |
| Msa1187610 | MtrunA17_Chr2g0291581 | 23.884 | 448 | 302 | 6 | 38 | 484 | 74 | 483 | 3.21e-34 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1187610 | AT4G38180.1 | 27.660 | 470 | 317 | 6 | 32 | 499 | 70 | 518 | 1.63e-56 | 207 |
| Msa1187610 | AT4G15090.1 | 25.367 | 477 | 328 | 9 | 50 | 523 | 66 | 517 | 1.45e-40 | 160 |
| Msa1187610 | AT4G15090.5 | 25.367 | 477 | 328 | 9 | 50 | 523 | 66 | 517 | 1.45e-40 | 160 |
| Msa1187610 | AT4G15090.3 | 25.367 | 477 | 328 | 9 | 50 | 523 | 66 | 517 | 1.45e-40 | 160 |
| Msa1187610 | AT4G15090.2 | 25.367 | 477 | 328 | 9 | 50 | 523 | 66 | 517 | 1.45e-40 | 160 |
| Msa1187610 | AT4G15090.4 | 25.367 | 477 | 328 | 9 | 50 | 523 | 66 | 517 | 1.45e-40 | 160 |
| Msa1187610 | AT3G06250.2 | 25.969 | 516 | 301 | 14 | 34 | 540 | 189 | 632 | 1.56e-40 | 159 |
| Msa1187610 | AT3G06250.1 | 25.969 | 516 | 301 | 14 | 34 | 540 | 189 | 632 | 1.56e-40 | 159 |
| Msa1187610 | AT3G06250.3 | 25.969 | 516 | 301 | 14 | 34 | 540 | 189 | 632 | 1.56e-40 | 159 |
| Msa1187610 | AT1G76320.3 | 26.049 | 453 | 293 | 11 | 50 | 496 | 12 | 428 | 1.48e-38 | 153 |
| Msa1187610 | AT1G76320.2 | 25.277 | 451 | 299 | 9 | 50 | 496 | 12 | 428 | 4.04e-38 | 152 |
| Msa1187610 | AT1G76320.1 | 26.049 | 453 | 293 | 11 | 50 | 496 | 12 | 428 | 4.20e-38 | 152 |
| Msa1187610 | AT1G76320.4 | 26.049 | 453 | 293 | 11 | 50 | 496 | 12 | 428 | 4.20e-38 | 152 |
| Msa1187610 | AT2G27110.2 | 23.300 | 691 | 424 | 19 | 4 | 666 | 23 | 635 | 4.93e-38 | 152 |
| Msa1187610 | AT2G27110.1 | 23.300 | 691 | 424 | 19 | 4 | 666 | 23 | 635 | 4.93e-38 | 152 |
| Msa1187610 | AT1G10240.2 | 25.251 | 499 | 334 | 13 | 49 | 536 | 62 | 532 | 6.08e-38 | 151 |
| Msa1187610 | AT1G10240.1 | 25.251 | 499 | 334 | 13 | 49 | 536 | 62 | 532 | 6.08e-38 | 151 |
| Msa1187610 | AT2G27110.3 | 25.417 | 480 | 307 | 11 | 213 | 666 | 36 | 490 | 1.38e-37 | 150 |
| Msa1187610 | AT5G28530.1 | 24.663 | 519 | 344 | 14 | 40 | 540 | 60 | 549 | 1.50e-36 | 147 |
| Msa1187610 | AT5G28530.3 | 24.470 | 519 | 341 | 15 | 40 | 540 | 60 | 545 | 8.27e-36 | 144 |
| Msa1187610 | AT5G28530.2 | 24.470 | 519 | 341 | 15 | 40 | 540 | 60 | 545 | 8.27e-36 | 144 |
| Msa1187610 | AT4G38170.1 | 27.740 | 292 | 199 | 5 | 235 | 523 | 24 | 306 | 1.74e-35 | 142 |
| Msa1187610 | AT5G18960.2 | 24.621 | 528 | 316 | 16 | 24 | 540 | 200 | 656 | 1.25e-34 | 142 |
| Msa1187610 | AT5G18960.1 | 24.621 | 528 | 316 | 16 | 24 | 540 | 200 | 656 | 1.25e-34 | 142 |
| Msa1187610 | AT3G22170.2 | 23.000 | 500 | 333 | 11 | 34 | 523 | 69 | 526 | 5.26e-34 | 140 |
| Msa1187610 | AT3G22170.1 | 23.000 | 500 | 333 | 11 | 34 | 523 | 69 | 526 | 5.26e-34 | 140 |
| Msa1187610 | AT1G80010.1 | 25.758 | 462 | 276 | 15 | 41 | 478 | 101 | 519 | 1.81e-31 | 131 |
| Msa1187610 | AT2G32250.5 | 24.056 | 503 | 302 | 14 | 1 | 496 | 8 | 437 | 2.86e-30 | 128 |
| Msa1187610 | AT2G32250.2 | 23.857 | 503 | 303 | 13 | 1 | 496 | 8 | 437 | 4.98e-30 | 127 |
| Msa1187610 | AT2G32250.4 | 23.857 | 503 | 303 | 13 | 1 | 496 | 8 | 437 | 4.98e-30 | 127 |
| Msa1187610 | AT2G32250.6 | 23.857 | 503 | 303 | 13 | 1 | 496 | 8 | 437 | 6.12e-30 | 127 |
| Msa1187610 | AT2G32250.1 | 23.857 | 503 | 303 | 13 | 1 | 496 | 8 | 437 | 6.12e-30 | 127 |
| Msa1187610 | AT2G32250.3 | 23.857 | 503 | 303 | 13 | 1 | 496 | 8 | 437 | 6.12e-30 | 127 |
| Msa1187610 | AT2G32250.8 | 24.242 | 462 | 276 | 11 | 41 | 496 | 3 | 396 | 1.03e-29 | 126 |
| Msa1187610 | AT2G32250.7 | 24.242 | 462 | 276 | 11 | 41 | 496 | 3 | 396 | 1.23e-29 | 126 |
| Msa1187610 | AT1G52520.1 | 22.326 | 533 | 361 | 15 | 41 | 557 | 91 | 586 | 3.17e-28 | 121 |
| Msa1187610 | AT4G19990.5 | 27.985 | 268 | 186 | 4 | 219 | 483 | 163 | 426 | 1.57e-26 | 116 |
| Msa1187610 | AT4G19990.7 | 27.985 | 268 | 186 | 4 | 219 | 483 | 177 | 440 | 1.58e-26 | 116 |
| Msa1187610 | AT4G19990.3 | 27.985 | 268 | 186 | 4 | 219 | 483 | 163 | 426 | 1.63e-26 | 116 |
| Msa1187610 | AT4G19990.4 | 27.985 | 268 | 186 | 4 | 219 | 483 | 163 | 426 | 1.63e-26 | 116 |
| Msa1187610 | AT4G19990.1 | 27.985 | 268 | 186 | 4 | 219 | 483 | 106 | 369 | 1.74e-26 | 115 |
| Msa1187610 | AT4G19990.6 | 27.985 | 268 | 186 | 4 | 219 | 483 | 163 | 426 | 2.35e-26 | 115 |
| Msa1187610 | AT4G19990.2 | 27.985 | 268 | 186 | 4 | 219 | 483 | 163 | 426 | 2.35e-26 | 115 |
Find 109 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 8_1:+27502466 | Msa1187610:CDS |
| AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 8_1:-27503582 | None:intergenic |
| CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 8_1:+27502733 | Msa1187610:CDS |
| TACATTTCAGCTGCCTTTCT+TGG | 0.197151 | 8_1:+27502185 | Msa1187610:intron |
| CAACAAGATTATGCTCTATT+TGG | 0.198611 | 8_1:+27501672 | Msa1187610:CDS |
| CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 8_1:+27502218 | Msa1187610:CDS |
| TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 8_1:-27502312 | None:intergenic |
| TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 8_1:-27503576 | None:intergenic |
| TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 8_1:+27503428 | Msa1187610:CDS |
| ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 8_1:-27502330 | None:intergenic |
| TTTGCTTCTTCCGAGCTATA+AGG | 0.345757 | 8_1:-27503644 | None:intergenic |
| GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 8_1:+27503030 | Msa1187610:CDS |
| GTCTTTAGTGCCAACATTCA+TGG | 0.367086 | 8_1:-27503304 | None:intergenic |
| TACACGTGTTTGCGCAAATC+CGG | 0.370641 | 8_1:+27503380 | Msa1187610:CDS |
| GAGGGATAATCATACTGATT+TGG | 0.375922 | 8_1:+27502766 | Msa1187610:CDS |
| CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 8_1:+27503420 | Msa1187610:CDS |
| TTTCAATTTATCATATCTAA+TGG | 0.390380 | 8_1:+27500808 | None:intergenic |
| TCATACTGATTTGGACTTCA+AGG | 0.395582 | 8_1:+27502775 | Msa1187610:CDS |
| TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 8_1:-27501192 | None:intergenic |
| AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 8_1:+27503568 | Msa1187610:CDS |
| TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 8_1:-27503558 | None:intergenic |
| TTCCTTCAAATACTATTATG+AGG | 0.399583 | 8_1:+27502907 | Msa1187610:CDS |
| GAGGAGTTTCTTCTTTCTAA+AGG | 0.401366 | 8_1:+27503453 | Msa1187610:CDS |
| CCATGATTCTTTATCACTAA+AGG | 0.406174 | 8_1:-27500953 | None:intergenic |
| TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 8_1:+27500963 | Msa1187610:CDS |
| GATTATGATCTTCAAACCTT+GGG | 0.413114 | 8_1:-27503078 | None:intergenic |
| ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 8_1:+27501034 | Msa1187610:CDS |
| CGATTATGATCTTCAAACCT+TGG | 0.425681 | 8_1:-27503079 | None:intergenic |
| CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 8_1:+27501369 | Msa1187610:CDS |
| AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 8_1:+27501251 | Msa1187610:CDS |
| TGAATGTCTATAAGATATAT+AGG | 0.445219 | 8_1:+27501283 | Msa1187610:CDS |
| TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 8_1:-27502323 | None:intergenic |
| GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 8_1:+27501234 | Msa1187610:CDS |
| GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 8_1:+27501399 | Msa1187610:CDS |
| TATGCATTGGTCTTCAGCTT+GGG | 0.450920 | 8_1:+27502607 | Msa1187610:CDS |
| ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 8_1:+27500888 | Msa1187610:CDS |
| TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 8_1:+27502397 | Msa1187610:CDS |
| GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 8_1:+27502561 | Msa1187610:CDS |
| AGAAATATTTCAGATGCCTC+CGG | 0.468885 | 8_1:-27503399 | None:intergenic |
| CTAAAGTAGCGCAAATGCTC+TGG | 0.477802 | 8_1:-27501339 | None:intergenic |
| GTATGCATTGGTCTTCAGCT+TGG | 0.479582 | 8_1:+27502606 | Msa1187610:CDS |
| GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 8_1:+27501444 | Msa1187610:CDS |
| CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 8_1:-27502909 | None:intergenic |
| TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 8_1:-27501228 | None:intergenic |
| TTTAATTATGCATATAACAC+TGG | 0.485542 | 8_1:+27501021 | Msa1187610:CDS |
| CTGTCTGTGAACCATCTGTT+GGG | 0.487793 | 8_1:+27503529 | Msa1187610:CDS |
| TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 8_1:+27501512 | Msa1187610:CDS |
| TATGAGGAGGACACAACAAA+AGG | 0.490908 | 8_1:+27502923 | Msa1187610:CDS |
| ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 8_1:-27502198 | None:intergenic |
| CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 8_1:+27501525 | Msa1187610:CDS |
| ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 8_1:+27502747 | Msa1187610:CDS |
| GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 8_1:-27502827 | None:intergenic |
| GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 8_1:+27501431 | Msa1187610:CDS |
| ATTGGTCTTCAGCTTGGGTG+AGG | 0.501327 | 8_1:+27502612 | Msa1187610:CDS |
| TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 8_1:-27501617 | None:intergenic |
| GCTGTCTGTGAACCATCTGT+TGG | 0.504047 | 8_1:+27503528 | Msa1187610:CDS |
| CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 8_1:+27502594 | Msa1187610:CDS |
| ATCATAATCGACTTGATGAA+AGG | 0.507955 | 8_1:+27503092 | Msa1187610:CDS |
| TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 8_1:-27501483 | None:intergenic |
| GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 8_1:-27503072 | None:intergenic |
| TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 8_1:-27502715 | None:intergenic |
| TGTCTATAAGATATATAGGT+GGG | 0.523740 | 8_1:+27501287 | Msa1187610:CDS |
| TCATAATCGACTTGATGAAA+GGG | 0.526860 | 8_1:+27503093 | Msa1187610:CDS |
| CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 8_1:-27502904 | None:intergenic |
| ACAAAATAAGAAATCAGATA+AGG | 0.530342 | 8_1:+27501083 | Msa1187610:CDS |
| GACAGAAATTCCTTATAGCT+CGG | 0.533906 | 8_1:+27503634 | Msa1187610:CDS |
| CTGAAATCTACCATGAATGT+TGG | 0.534154 | 8_1:+27503294 | Msa1187610:CDS |
| TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 8_1:+27501128 | Msa1187610:CDS |
| AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 8_1:-27502710 | None:intergenic |
| TGTTATGCTTGTAACAAAGA+AGG | 0.541604 | 8_1:+27501117 | Msa1187610:CDS |
| ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 8_1:+27502924 | Msa1187610:CDS |
| CCTTTAGTGATAAAGAATCA+TGG | 0.543522 | 8_1:+27500953 | Msa1187610:CDS |
| AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 8_1:+27501129 | Msa1187610:CDS |
| AAATGCTCTGGTTTATGTAA+TGG | 0.552634 | 8_1:-27501327 | None:intergenic |
| ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 8_1:-27502343 | None:intergenic |
| AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 8_1:+27501579 | Msa1187610:CDS |
| TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 8_1:+27500912 | Msa1187610:CDS |
| GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 8_1:+27501447 | Msa1187610:CDS |
| GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 8_1:-27502828 | None:intergenic |
| TTGAAGAAAACCTTTCCCCA+AGG | 0.580876 | 8_1:+27503062 | Msa1187610:CDS |
| TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 8_1:-27503540 | None:intergenic |
| GAAGCAAAAGAAAGATGATG+AGG | 0.585686 | 8_1:+27503659 | Msa1187610:CDS |
| TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 8_1:-27502849 | None:intergenic |
| TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 8_1:+27501438 | Msa1187610:CDS |
| TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 8_1:+27503421 | Msa1187610:CDS |
| ACCATATACACAGACCAGGC+TGG | 0.590176 | 8_1:+27502329 | Msa1187610:CDS |
| ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 8_1:+27503416 | Msa1187610:CDS |
| TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 8_1:-27503496 | None:intergenic |
| GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 8_1:+27501518 | Msa1187610:CDS |
| TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 8_1:-27503328 | None:intergenic |
| AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 8_1:+27501432 | Msa1187610:CDS |
| AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 8_1:+27501521 | Msa1187610:CDS |
| GATTTCAGCTTATCGACAGA+CGG | 0.603217 | 8_1:-27503279 | None:intergenic |
| ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 8_1:+27502825 | Msa1187610:CDS |
| CTTCAAATACTATTATGAGG+AGG | 0.607664 | 8_1:+27502910 | Msa1187610:CDS |
| ATATCAACTTCATCTGAGAG+TGG | 0.614980 | 8_1:+27500877 | Msa1187610:CDS |
| AGAACTGGACTGTCACATGT+TGG | 0.620791 | 8_1:-27501177 | None:intergenic |
| AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 8_1:-27502563 | None:intergenic |
| GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 8_1:+27501452 | Msa1187610:CDS |
| ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 8_1:-27503077 | None:intergenic |
| GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 8_1:+27502398 | Msa1187610:CDS |
| CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 8_1:+27502748 | Msa1187610:CDS |
| ATGTCTATAAGATATATAGG+TGG | 0.643489 | 8_1:+27501286 | Msa1187610:CDS |
| ACGTGTTTGCGCAAATCCGG+AGG | 0.655332 | 8_1:+27503383 | Msa1187610:CDS |
| TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 8_1:-27502869 | None:intergenic |
| GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 8_1:+27503405 | Msa1187610:CDS |
| TCAAACCATATACACAGACC+AGG | 0.671057 | 8_1:+27502325 | Msa1187610:CDS |
| ATGTTGATAATGATAATGAG+AGG | 0.683310 | 8_1:+27503008 | Msa1187610:CDS |
| TGTTGATAATGATAATGAGA+GGG | 0.689129 | 8_1:+27503009 | Msa1187610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATTATGCATATAACAC+TGG | + | chr8_1:27501021-27501040 | Msa1187610:CDS | 20.0% |
| !! | ACAAAATAAGAAATCAGATA+AGG | + | chr8_1:27501083-27501102 | Msa1187610:CDS | 20.0% |
| !! | TGAATGTCTATAAGATATAT+AGG | + | chr8_1:27501283-27501302 | Msa1187610:CDS | 20.0% |
| !!! | TGAATGTTTATATTGATTGA+AGG | + | chr8_1:27501876-27501895 | Msa1187610:intron | 20.0% |
| !!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr8_1:27501904-27501923 | Msa1187610:intron | 20.0% |
| !!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr8_1:27502536-27502555 | Msa1187610:CDS | 20.0% |
| ! | TGAAAATTCAGTTATTGATG+CGG | + | chr8_1:27500912-27500931 | Msa1187610:CDS | 25.0% |
| !!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr8_1:27501073-27501092 | None:intergenic | 25.0% |
| ! | ATGTCTATAAGATATATAGG+TGG | + | chr8_1:27501286-27501305 | Msa1187610:CDS | 25.0% |
| ! | TGTCTATAAGATATATAGGT+GGG | + | chr8_1:27501287-27501306 | Msa1187610:CDS | 25.0% |
| !!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr8_1:27501399-27501418 | Msa1187610:CDS | 25.0% |
| !!! | AAGACATAGCTAGTATTTTT+TGG | + | chr8_1:27501634-27501653 | Msa1187610:CDS | 25.0% |
| !!! | AGACATAGCTAGTATTTTTT+GGG | + | chr8_1:27501635-27501654 | Msa1187610:CDS | 25.0% |
| ! | ACCGAACAAACAATAAAAAT+CGG | + | chr8_1:27501721-27501740 | Msa1187610:CDS | 25.0% |
| ! | AGTACAAAATACTAACCTAA+TGG | - | chr8_1:27501747-27501766 | None:intergenic | 25.0% |
| ! | TGAAATTTGAATGAATGTTC+TGG | + | chr8_1:27501794-27501813 | Msa1187610:intron | 25.0% |
| !! | AGGTTTAGAATTTAATGTTC+TGG | + | chr8_1:27501896-27501915 | Msa1187610:intron | 25.0% |
| !!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr8_1:27501903-27501922 | Msa1187610:intron | 25.0% |
| !! | TGTTGTATTTTGTTCTGATT+TGG | + | chr8_1:27502156-27502175 | Msa1187610:intron | 25.0% |
| ! | AAAACACCTTGAAAAACATT+CGG | - | chr8_1:27502374-27502393 | None:intergenic | 25.0% |
| ! | TTTCGATGAGTTAACTAATT+TGG | + | chr8_1:27502466-27502485 | Msa1187610:CDS | 25.0% |
| !!! | AATCAGATTTTGACTACAAT+TGG | + | chr8_1:27502507-27502526 | Msa1187610:CDS | 25.0% |
| !!! | ATCAGATTTTGACTACAATT+GGG | + | chr8_1:27502508-27502527 | Msa1187610:CDS | 25.0% |
| !!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr8_1:27502540-27502559 | Msa1187610:CDS | 25.0% |
| ! | CTTTAGTCATTTCAACATTA+TGG | + | chr8_1:27502733-27502752 | Msa1187610:CDS | 25.0% |
| ! | TGAATAAATGAAAAGCAAGA+TGG | - | chr8_1:27502872-27502891 | None:intergenic | 25.0% |
| ! | CATAATAGTATTTGAAGGAA+AGG | - | chr8_1:27502907-27502926 | None:intergenic | 25.0% |
| ! | TTCCTTCAAATACTATTATG+AGG | + | chr8_1:27502907-27502926 | Msa1187610:CDS | 25.0% |
| !!! | ATGTTGATAATGATAATGAG+AGG | + | chr8_1:27503008-27503027 | Msa1187610:CDS | 25.0% |
| !!! | TGTTGATAATGATAATGAGA+GGG | + | chr8_1:27503009-27503028 | Msa1187610:CDS | 25.0% |
| CCATGATTCTTTATCACTAA+AGG | - | chr8_1:27500956-27500975 | None:intergenic | 30.0% | |
| CCTTTAGTGATAAAGAATCA+TGG | + | chr8_1:27500953-27500972 | Msa1187610:CDS | 30.0% | |
| TAAAGAATCATGGAAGTCTT+TGG | + | chr8_1:27500963-27500982 | Msa1187610:CDS | 30.0% | |
| TGTTATGCTTGTAACAAAGA+AGG | + | chr8_1:27501117-27501136 | Msa1187610:CDS | 30.0% | |
| TAACAAAGAAGGTTTCAAGA+AGG | + | chr8_1:27501128-27501147 | Msa1187610:CDS | 30.0% | |
| AACAAAGAAGGTTTCAAGAA+GGG | + | chr8_1:27501129-27501148 | Msa1187610:CDS | 30.0% | |
| TAAAGAAAAACCAGAGGAAA+GGG | + | chr8_1:27501218-27501237 | Msa1187610:CDS | 30.0% | |
| ! | AGCTGGAATATATTTGAAGT+TGG | + | chr8_1:27501251-27501270 | Msa1187610:CDS | 30.0% |
| ! | AAATGCTCTGGTTTATGTAA+TGG | - | chr8_1:27501330-27501349 | None:intergenic | 30.0% |
| AGAACATCTTATGAAGTGAT+GGG | + | chr8_1:27501432-27501451 | Msa1187610:CDS | 30.0% | |
| ! | GAATCTTCCTTTTCGATTTT+CGG | + | chr8_1:27501476-27501495 | Msa1187610:CDS | 30.0% |
| TTTAAGTCCGAAAATCGAAA+AGG | - | chr8_1:27501486-27501505 | None:intergenic | 30.0% | |
| TGGATATCATAGTAAAAACC+TGG | - | chr8_1:27501600-27501619 | None:intergenic | 30.0% | |
| CAACAAGATTATGCTCTATT+TGG | + | chr8_1:27501672-27501691 | Msa1187610:CDS | 30.0% | |
| !! | GCCGATTTTTATTGTTTGTT+CGG | - | chr8_1:27501725-27501744 | None:intergenic | 30.0% |
| AACAATAAAAATCGGCCATT+AGG | + | chr8_1:27501729-27501748 | Msa1187610:CDS | 30.0% | |
| !! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr8_1:27501808-27501827 | Msa1187610:intron | 30.0% |
| CTGGTATATGTGTGTTAATT+TGG | + | chr8_1:27501833-27501852 | Msa1187610:intron | 30.0% | |
| AAACACATATGATCTTTCCA+TGG | - | chr8_1:27501967-27501986 | None:intergenic | 30.0% | |
| TTTCTATTTACACAGCACAA+TGG | + | chr8_1:27502115-27502134 | Msa1187610:intron | 30.0% | |
| ATGATTGTCAAAACCAAGAA+AGG | - | chr8_1:27502201-27502220 | None:intergenic | 30.0% | |
| ! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr8_1:27502315-27502334 | None:intergenic | 30.0% |
| ! | TCAATTCCGAATGTTTTTCA+AGG | + | chr8_1:27502365-27502384 | Msa1187610:CDS | 30.0% |
| !!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr8_1:27502377-27502396 | Msa1187610:CDS | 30.0% |
| GAGAATGCAAAGAAAAATCT+CGG | + | chr8_1:27502422-27502441 | Msa1187610:CDS | 30.0% | |
| ! | TCTTTTAATGCTTTTCTTCG+TGG | + | chr8_1:27502677-27502696 | Msa1187610:CDS | 30.0% |
| TAAAGAATCGAACAAGTGAA+TGG | - | chr8_1:27502718-27502737 | None:intergenic | 30.0% | |
| TGGTGTATACTTGTTTACTA+CGG | - | chr8_1:27502852-27502871 | None:intergenic | 30.0% | |
| CTCCTCATAATAGTATTTGA+AGG | - | chr8_1:27502912-27502931 | None:intergenic | 30.0% | |
| CTTCAAATACTATTATGAGG+AGG | + | chr8_1:27502910-27502929 | Msa1187610:CDS | 30.0% | |
| ! | CAAAGTTTTCACAATTGAGA+AGG | + | chr8_1:27502967-27502986 | Msa1187610:CDS | 30.0% |
| ATTATGATCTTCAAACCTTG+GGG | - | chr8_1:27503080-27503099 | None:intergenic | 30.0% | |
| GATTATGATCTTCAAACCTT+GGG | - | chr8_1:27503081-27503100 | None:intergenic | 30.0% | |
| !! | ATCATAATCGACTTGATGAA+AGG | + | chr8_1:27503092-27503111 | Msa1187610:CDS | 30.0% |
| !! | TCATAATCGACTTGATGAAA+GGG | + | chr8_1:27503093-27503112 | Msa1187610:CDS | 30.0% |
| !! | TCGACATGTTTTCAAGATTT+TGG | + | chr8_1:27503189-27503208 | Msa1187610:intron | 30.0% |
| !! | ACATGTTTTCAAGATTTTGG+AGG | + | chr8_1:27503192-27503211 | Msa1187610:intron | 30.0% |
| !!! | CTGCACAATATGTTTTAAAG+CGG | + | chr8_1:27503238-27503257 | Msa1187610:intron | 30.0% |
| ! | GCATCTGAAATATTTCTCAA+CGG | + | chr8_1:27503405-27503424 | Msa1187610:CDS | 30.0% |
| ! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr8_1:27503561-27503580 | None:intergenic | 30.0% |
| AAGAAAGACCAAATCCAATT+AGG | + | chr8_1:27503568-27503587 | Msa1187610:CDS | 30.0% | |
| TTCTTTGACCTAATTGGATT+TGG | - | chr8_1:27503579-27503598 | None:intergenic | 30.0% | |
| !!! | GTGTTTGTTGCTGTTTTCAA+TGG | + | chr8_1:27500849-27500868 | Msa1187610:exon | 35.0% |
| ATATCAACTTCATCTGAGAG+TGG | + | chr8_1:27500877-27500896 | Msa1187610:CDS | 35.0% | |
| ATAACACTGGATTCTCTGTT+AGG | + | chr8_1:27501034-27501053 | Msa1187610:CDS | 35.0% | |
| GTCTGCTTAATCCTAAAAAC+AGG | + | chr8_1:27501154-27501173 | Msa1187610:CDS | 35.0% | |
| TTCTCATACTCAACAAGAAC+TGG | - | chr8_1:27501195-27501214 | None:intergenic | 35.0% | |
| GAAAGCTAAAGAAAAACCAG+AGG | + | chr8_1:27501212-27501231 | Msa1187610:CDS | 35.0% | |
| CTAAAGAAAAACCAGAGGAA+AGG | + | chr8_1:27501217-27501236 | Msa1187610:CDS | 35.0% | |
| CGAGAAGTAAATGAAGTTCA+AGG | + | chr8_1:27501369-27501388 | Msa1187610:CDS | 35.0% | |
| GAGAACATCTTATGAAGTGA+TGG | + | chr8_1:27501431-27501450 | Msa1187610:CDS | 35.0% | |
| TCTAATGACAACTCGTCAAA+AGG | + | chr8_1:27501512-27501531 | Msa1187610:CDS | 35.0% | |
| ! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr8_1:27501814-27501833 | Msa1187610:intron | 35.0% |
| !! | CACAAATTCTAAGGCAAGAT+AGG | - | chr8_1:27501934-27501953 | None:intergenic | 35.0% |
| TGTACAGAGCACAAATTCTA+AGG | - | chr8_1:27501943-27501962 | None:intergenic | 35.0% | |
| ! | CATCGTAAGAGTGTGTTATT+TGG | + | chr8_1:27502218-27502237 | Msa1187610:CDS | 35.0% |
| !!! | AGACATCAGCTACTTTTGAT+TGG | + | chr8_1:27502261-27502280 | Msa1187610:CDS | 35.0% |
| ! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr8_1:27502390-27502409 | Msa1187610:CDS | 35.0% |
| ! | TTTTAATGGAAGGCCTACTT+CGG | + | chr8_1:27502550-27502569 | Msa1187610:CDS | 35.0% |
| CTCATTCAAATCGTATGCAT+TGG | + | chr8_1:27502594-27502613 | Msa1187610:CDS | 35.0% | |
| ACATTATGGTTCAGAGAATG+AGG | + | chr8_1:27502747-27502766 | Msa1187610:CDS | 35.0% | |
| CATTATGGTTCAGAGAATGA+GGG | + | chr8_1:27502748-27502767 | Msa1187610:CDS | 35.0% | |
| ! | GAGGGATAATCATACTGATT+TGG | + | chr8_1:27502766-27502785 | Msa1187610:CDS | 35.0% |
| !! | TCATACTGATTTGGACTTCA+AGG | + | chr8_1:27502775-27502794 | Msa1187610:CDS | 35.0% |
| ! | GGTTTCGAATGTTGATGTTT+TGG | + | chr8_1:27503030-27503049 | Msa1187610:CDS | 35.0% |
| CGATTATGATCTTCAAACCT+TGG | - | chr8_1:27503082-27503101 | None:intergenic | 35.0% | |
| !! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr8_1:27503199-27503218 | Msa1187610:intron | 35.0% |
| !! | CGCTTTAAAACATATTGTGC+AGG | - | chr8_1:27503240-27503259 | None:intergenic | 35.0% |
| !!! | CACAATATGTTTTAAAGCGG+TGG | + | chr8_1:27503241-27503260 | Msa1187610:intron | 35.0% |
| CTGAAATCTACCATGAATGT+TGG | + | chr8_1:27503294-27503313 | Msa1187610:CDS | 35.0% | |
| AGAAATATTTCAGATGCCTC+CGG | - | chr8_1:27503402-27503421 | None:intergenic | 35.0% | |
| GAGGAGTTTCTTCTTTCTAA+AGG | + | chr8_1:27503453-27503472 | Msa1187610:CDS | 35.0% | |
| !! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr8_1:27503507-27503526 | None:intergenic | 35.0% |
| GACAGAAATTCCTTATAGCT+CGG | + | chr8_1:27503634-27503653 | Msa1187610:CDS | 35.0% | |
| GAAGCAAAAGAAAGATGATG+AGG | + | chr8_1:27503659-27503678 | Msa1187610:CDS | 35.0% | |
| ATCTGAGAGTGGACAATTGA+CGG | + | chr8_1:27500888-27500907 | Msa1187610:CDS | 40.0% | |
| !! | TCACATGTTGGCCTGTTTTT+AGG | - | chr8_1:27501168-27501187 | None:intergenic | 40.0% |
| !! | TCTTATGAAGTGATGGGTCA+AGG | + | chr8_1:27501438-27501457 | Msa1187610:CDS | 40.0% |
| !!! | GCTAGTATTTTTTGGGCAGA+TGG | + | chr8_1:27501642-27501661 | Msa1187610:CDS | 40.0% |
| TCCAGCTATGCAAAGATCAT+AGG | + | chr8_1:27502061-27502080 | Msa1187610:intron | 40.0% | |
| ACCTATGATCTTTGCATAGC+TGG | - | chr8_1:27502065-27502084 | None:intergenic | 40.0% | |
| TACATTTCAGCTGCCTTTCT+TGG | + | chr8_1:27502185-27502204 | Msa1187610:intron | 40.0% | |
| TGGTCTGTGTATATGGTTTG+AGG | - | chr8_1:27502326-27502345 | None:intergenic | 40.0% | |
| TCAAACCATATACACAGACC+AGG | + | chr8_1:27502325-27502344 | Msa1187610:CDS | 40.0% | |
| !! | TATGCATTGGTCTTCAGCTT+GGG | + | chr8_1:27502607-27502626 | Msa1187610:CDS | 40.0% |
| ! | GTGAGGTCACATTTTACAAC+TGG | + | chr8_1:27502629-27502648 | Msa1187610:CDS | 40.0% |
| AATCGAACAAGTGAATGGTC+TGG | - | chr8_1:27502713-27502732 | None:intergenic | 40.0% | |
| TATGAGGAGGACACAACAAA+AGG | + | chr8_1:27502923-27502942 | Msa1187610:CDS | 40.0% | |
| ATGAGGAGGACACAACAAAA+GGG | + | chr8_1:27502924-27502943 | Msa1187610:CDS | 40.0% | |
| TTGAAGAAAACCTTTCCCCA+AGG | + | chr8_1:27503062-27503081 | Msa1187610:CDS | 40.0% | |
| CATGTCGTATGTTTGAGAAC+CGG | + | chr8_1:27503155-27503174 | Msa1187610:intron | 40.0% | |
| ATGTCGTATGTTTGAGAACC+GGG | + | chr8_1:27503156-27503175 | Msa1187610:intron | 40.0% | |
| !! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr8_1:27503202-27503221 | Msa1187610:intron | 40.0% |
| GATTTCAGCTTATCGACAGA+CGG | - | chr8_1:27503282-27503301 | None:intergenic | 40.0% | |
| GTCTTTAGTGCCAACATTCA+TGG | - | chr8_1:27503307-27503326 | None:intergenic | 40.0% | |
| TTGATATCGTTGTGCTTGAG+TGG | - | chr8_1:27503331-27503350 | None:intergenic | 40.0% | |
| ATTTCTCAACGGTGTTCTTG+AGG | + | chr8_1:27503416-27503435 | Msa1187610:CDS | 40.0% | |
| ! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr8_1:27503499-27503518 | None:intergenic | 40.0% |
| AGTCGCTTCTTTGACCTAAT+TGG | - | chr8_1:27503585-27503604 | None:intergenic | 40.0% | |
| TTTGCTTCTTCCGAGCTATA+AGG | - | chr8_1:27503647-27503666 | None:intergenic | 40.0% | |
| AGAACTGGACTGTCACATGT+TGG | - | chr8_1:27501180-27501199 | None:intergenic | 45.0% | |
| GAAAAACCAGAGGAAAGGGT+TGG | + | chr8_1:27501222-27501241 | Msa1187610:CDS | 45.0% | |
| TTACAACCAACCCTTTCCTC+TGG | - | chr8_1:27501231-27501250 | None:intergenic | 45.0% | |
| !! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr8_1:27501234-27501253 | Msa1187610:CDS | 45.0% |
| CTAAAGTAGCGCAAATGCTC+TGG | - | chr8_1:27501342-27501361 | None:intergenic | 45.0% | |
| GACAACTCGTCAAAAGGAGA+TGG | + | chr8_1:27501518-27501537 | Msa1187610:CDS | 45.0% | |
| AACTCGTCAAAAGGAGATGG+TGG | + | chr8_1:27501521-27501540 | Msa1187610:CDS | 45.0% | |
| AATGAAGCTCTCTCGAAACC+AGG | + | chr8_1:27501579-27501598 | Msa1187610:CDS | 45.0% | |
| TGTCTTCTGCAGCATCAACT+TGG | - | chr8_1:27501620-27501639 | None:intergenic | 45.0% | |
| ATTTGTGCTCTGTACAGCCA+TGG | + | chr8_1:27501947-27501966 | Msa1187610:intron | 45.0% | |
| AGCCACTTAAAGTCCGAAGT+AGG | - | chr8_1:27502566-27502585 | None:intergenic | 45.0% | |
| !! | GTATGCATTGGTCTTCAGCT+TGG | + | chr8_1:27502606-27502625 | Msa1187610:CDS | 45.0% |
| ATCCCAACAGTCAGCTTATG+CGG | + | chr8_1:27502825-27502844 | Msa1187610:CDS | 45.0% | |
| GATCTTCAAACCTTGGGGAA+AGG | - | chr8_1:27503075-27503094 | None:intergenic | 45.0% | |
| TGTCGTATGTTTGAGAACCG+GGG | + | chr8_1:27503157-27503176 | Msa1187610:intron | 45.0% | |
| CATGTCGACATAAGAAACCC+CGG | - | chr8_1:27503177-27503196 | None:intergenic | 45.0% | |
| TACACGTGTTTGCGCAAATC+CGG | + | chr8_1:27503380-27503399 | Msa1187610:CDS | 45.0% | |
| TGTTCTTGAGGCAGGGAAAA+AGG | + | chr8_1:27503428-27503447 | Msa1187610:CDS | 45.0% | |
| CTGTCTGTGAACCATCTGTT+GGG | + | chr8_1:27503529-27503548 | Msa1187610:CDS | 45.0% | |
| !! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr8_1:27501444-27501463 | Msa1187610:CDS | 50.0% |
| ACCATATACACAGACCAGGC+TGG | + | chr8_1:27502329-27502348 | Msa1187610:CDS | 50.0% | |
| ACCAGCCTGGTCTGTGTATA+TGG | - | chr8_1:27502333-27502352 | None:intergenic | 50.0% | |
| TGGTCTTTGCTCATGGCACA+TGG | + | chr8_1:27502397-27502416 | Msa1187610:CDS | 50.0% | |
| GGTCTTTGCTCATGGCACAT+GGG | + | chr8_1:27502398-27502417 | Msa1187610:CDS | 50.0% | |
| GGCCTACTTCGGACTTTAAG+TGG | + | chr8_1:27502561-27502580 | Msa1187610:CDS | 50.0% | |
| !! | ATTGGTCTTCAGCTTGGGTG+AGG | + | chr8_1:27502612-27502631 | Msa1187610:CDS | 50.0% |
| GACCGCATAAGCTGACTGTT+GGG | - | chr8_1:27502830-27502849 | None:intergenic | 50.0% | |
| GGGTTGTCACAGTCGACATT+AGG | + | chr8_1:27503113-27503132 | Msa1187610:intron | 50.0% | |
| TCAACGGTGTTCTTGAGGCA+GGG | + | chr8_1:27503421-27503440 | Msa1187610:CDS | 50.0% | |
| GCTGTCTGTGAACCATCTGT+TGG | + | chr8_1:27503528-27503547 | Msa1187610:CDS | 50.0% | |
| ! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr8_1:27503543-27503562 | None:intergenic | 50.0% |
| !! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr8_1:27501447-27501466 | Msa1187610:CDS | 55.0% |
| ! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr8_1:27501525-27501544 | Msa1187610:CDS | 55.0% |
| ACTTCAACAACGCACCAGCC+TGG | - | chr8_1:27502346-27502365 | None:intergenic | 55.0% | |
| GGACCGCATAAGCTGACTGT+TGG | - | chr8_1:27502831-27502850 | None:intergenic | 55.0% | |
| ACGTGTTTGCGCAAATCCGG+AGG | + | chr8_1:27503383-27503402 | Msa1187610:CDS | 55.0% | |
| CTCAACGGTGTTCTTGAGGC+AGG | + | chr8_1:27503420-27503439 | Msa1187610:CDS | 55.0% | |
| TGAGGCAGGGAAAAAGGCAG+AGG | + | chr8_1:27503434-27503453 | Msa1187610:CDS | 55.0% | |
| GGGTCAAGGAGTTGGAGGCA+CGG | + | chr8_1:27501452-27501471 | Msa1187610:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 27500822 | 27503695 | 27500822 | ID=Msa1187610;Name=Msa1187610 |
| chr8_1 | mRNA | 27500822 | 27503695 | 27500822 | ID=Msa1187610-mRNA-1;Parent=Msa1187610;Name=Msa1187610-mRNA-1;_AED=0.06;_eAED=0.06;_QI=46|0.5|0.33|1|1|1|3|0|746 |
| chr8_1 | exon | 27500822 | 27501750 | 27500822 | ID=Msa1187610-mRNA-1:exon:9634;Parent=Msa1187610-mRNA-1 |
| chr8_1 | exon | 27502195 | 27503114 | 27502195 | ID=Msa1187610-mRNA-1:exon:9635;Parent=Msa1187610-mRNA-1 |
| chr8_1 | exon | 27503258 | 27503695 | 27503258 | ID=Msa1187610-mRNA-1:exon:9636;Parent=Msa1187610-mRNA-1 |
| chr8_1 | five_prime_UTR | 27500822 | 27500867 | 27500822 | ID=Msa1187610-mRNA-1:five_prime_utr;Parent=Msa1187610-mRNA-1 |
| chr8_1 | CDS | 27500868 | 27501750 | 27500868 | ID=Msa1187610-mRNA-1:cds;Parent=Msa1187610-mRNA-1 |
| chr8_1 | CDS | 27502195 | 27503114 | 27502195 | ID=Msa1187610-mRNA-1:cds;Parent=Msa1187610-mRNA-1 |
| chr8_1 | CDS | 27503258 | 27503695 | 27503258 | ID=Msa1187610-mRNA-1:cds;Parent=Msa1187610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
