Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193140 | XP_018675701.1 | 60.262 | 229 | 42 | 3 | 6 | 215 | 27 | 225 | 6.08e-82 | 257 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193140 | sp|P43291|SRK2A_ARATH | 53.668 | 259 | 63 | 7 | 6 | 210 | 27 | 282 | 4.32e-78 | 242 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193140 | MtrunA17_Chr8g0385281 | 55.970 | 268 | 51 | 6 | 2 | 210 | 24 | 283 | 8.10e-87 | 261 |
| Msa1193140 | MtrunA17_Chr3g0131061 | 54.753 | 263 | 62 | 6 | 2 | 210 | 23 | 282 | 8.06e-83 | 251 |
| Msa1193140 | MtrunA17_Chr2g0277501 | 52.510 | 259 | 66 | 7 | 6 | 210 | 27 | 282 | 1.13e-76 | 235 |
| Msa1193140 | MtrunA17_Chr4g0055451 | 46.640 | 253 | 78 | 7 | 8 | 206 | 30 | 279 | 1.94e-64 | 203 |
| Msa1193140 | MtrunA17_Chr8g0381821 | 46.721 | 244 | 76 | 7 | 8 | 201 | 34 | 273 | 5.80e-61 | 194 |
| Msa1193140 | MtrunA17_Chr5g0426521 | 44.402 | 259 | 87 | 7 | 6 | 210 | 27 | 282 | 5.13e-60 | 192 |
| Msa1193140 | MtrunA17_Chr4g0045371 | 44.223 | 251 | 73 | 6 | 8 | 199 | 48 | 290 | 6.71e-60 | 192 |
| Msa1193140 | MtrunA17_Chr5g0399911 | 46.025 | 239 | 76 | 6 | 16 | 204 | 56 | 291 | 1.02e-59 | 191 |
| Msa1193140 | MtrunA17_Chr1g0162301 | 44.355 | 248 | 71 | 6 | 8 | 196 | 49 | 288 | 3.40e-59 | 191 |
| Msa1193140 | MtrunA17_Chr3g0123791 | 47.945 | 219 | 66 | 4 | 14 | 192 | 40 | 250 | 1.09e-58 | 189 |
| Msa1193140 | MtrunA17_Chr4g0055431 | 42.586 | 263 | 74 | 6 | 8 | 206 | 36 | 285 | 8.82e-57 | 183 |
| Msa1193140 | MtrunA17_Chr5g0402661 | 41.036 | 251 | 81 | 6 | 6 | 197 | 41 | 283 | 3.11e-56 | 182 |
| Msa1193140 | MtrunA17_Chr8g0374571 | 42.292 | 253 | 79 | 6 | 6 | 199 | 46 | 290 | 3.14e-56 | 183 |
| Msa1193140 | MtrunA17_Chr8g0380661 | 41.322 | 242 | 82 | 7 | 15 | 204 | 40 | 273 | 2.60e-52 | 171 |
| Msa1193140 | MtrunA17_Chr1g0176421 | 26.047 | 215 | 125 | 5 | 10 | 192 | 196 | 408 | 8.26e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193140 | AT1G10940.1 | 53.668 | 259 | 63 | 7 | 6 | 210 | 27 | 282 | 4.39e-79 | 242 |
| Msa1193140 | AT1G10940.2 | 52.830 | 265 | 64 | 7 | 6 | 210 | 27 | 290 | 1.02e-78 | 241 |
| Msa1193140 | AT1G60940.1 | 52.510 | 259 | 66 | 7 | 6 | 210 | 27 | 282 | 4.72e-76 | 234 |
| Msa1193140 | AT1G60940.2 | 52.510 | 259 | 66 | 7 | 6 | 210 | 27 | 282 | 4.72e-76 | 234 |
| Msa1193140 | AT5G63650.1 | 51.136 | 264 | 62 | 6 | 6 | 210 | 27 | 282 | 4.28e-75 | 231 |
| Msa1193140 | AT5G08590.1 | 50.192 | 261 | 63 | 6 | 6 | 207 | 27 | 279 | 1.54e-72 | 225 |
| Msa1193140 | AT2G23030.1 | 46.296 | 270 | 68 | 5 | 2 | 207 | 23 | 279 | 9.17e-67 | 209 |
| Msa1193140 | AT4G33950.2 | 46.725 | 229 | 70 | 5 | 8 | 192 | 46 | 266 | 2.57e-60 | 193 |
| Msa1193140 | AT4G33950.1 | 46.725 | 229 | 70 | 5 | 8 | 192 | 46 | 266 | 2.67e-60 | 194 |
| Msa1193140 | AT3G50500.1 | 44.444 | 252 | 73 | 6 | 6 | 198 | 46 | 289 | 3.73e-59 | 191 |
| Msa1193140 | AT5G66880.1 | 43.678 | 261 | 79 | 7 | 6 | 206 | 45 | 297 | 1.24e-58 | 189 |
| Msa1193140 | AT5G66880.2 | 43.678 | 261 | 79 | 7 | 6 | 206 | 45 | 297 | 1.24e-58 | 189 |
| Msa1193140 | AT3G50500.2 | 44.015 | 259 | 71 | 7 | 6 | 198 | 46 | 296 | 1.48e-58 | 189 |
| Msa1193140 | AT4G40010.1 | 49.533 | 214 | 70 | 5 | 14 | 192 | 39 | 249 | 1.02e-57 | 187 |
| Msa1193140 | AT1G78290.3 | 44.980 | 249 | 80 | 7 | 6 | 200 | 27 | 272 | 2.35e-55 | 180 |
| Msa1193140 | AT1G78290.2 | 44.980 | 249 | 80 | 7 | 6 | 200 | 27 | 272 | 2.35e-55 | 180 |
| Msa1193140 | AT5G08590.2 | 45.238 | 210 | 52 | 5 | 53 | 207 | 2 | 203 | 2.06e-46 | 155 |
| Msa1193140 | AT4G11373.1 | 78.689 | 61 | 13 | 0 | 15 | 75 | 9 | 69 | 3.09e-26 | 98.6 |
| Msa1193140 | AT5G23580.1 | 25.446 | 224 | 133 | 5 | 1 | 192 | 48 | 269 | 1.73e-12 | 66.6 |
Find 61 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTGTTGCTAATCCATTA+AGG | 0.221829 | 8_1:-39309972 | Msa1193140:CDS |
| TCATCAAAACATACCCTTAA+TGG | 0.235037 | 8_1:+39309958 | None:intergenic |
| GTTACTATTGCTAAATGATT+AGG | 0.250308 | 8_1:+39310559 | None:intergenic |
| TTACTATTGCTAAATGATTA+GGG | 0.261994 | 8_1:+39310560 | None:intergenic |
| CTCCAACTAGCATGACATAA+TGG | 0.301708 | 8_1:+39310216 | None:intergenic |
| TCCTTGAAGCGAATTATATT+CGG | 0.307244 | 8_1:+39310698 | None:intergenic |
| TGAGATATGTGAACATAATC+AGG | 0.310733 | 8_1:+39310021 | None:intergenic |
| TTCTTTCGCCAGCTGATATC+TGG | 0.315515 | 8_1:-39310370 | Msa1193140:CDS |
| AAAGCTTTGGATTGCCTCTC+TGG | 0.335886 | 8_1:+39309538 | None:intergenic |
| GCTGAACCGACCAGCATTAC+AGG | 0.337585 | 8_1:+39310501 | None:intergenic |
| CACTTTGAATAGAAAAGCTT+TGG | 0.341859 | 8_1:+39309525 | None:intergenic |
| ATTTGTTGCTAATCCATTAA+GGG | 0.394009 | 8_1:-39309971 | Msa1193140:intron |
| GAGAACCTCCTCCGGTATCT+AGG | 0.405420 | 8_1:-39309469 | None:intergenic |
| AGCATATCCCTTTGAGGATC+GGG | 0.410059 | 8_1:-39310195 | Msa1193140:CDS |
| AGGCTTGATGGTGCAATTCA+TGG | 0.410361 | 8_1:+39311157 | None:intergenic |
| AAGCTTCACCAGAGGCTTGA+TGG | 0.417893 | 8_1:+39311145 | None:intergenic |
| CCCGAATATAATTCGCTTCA+AGG | 0.424576 | 8_1:-39310699 | Msa1193140:CDS |
| GCTGATTCAGTTAGCTCCCT+TGG | 0.441373 | 8_1:+39309576 | None:intergenic |
| TAGCAACAAATATACGAGAT+AGG | 0.461711 | 8_1:+39309983 | None:intergenic |
| TCCAACTAGCATGACATAAT+GGG | 0.469374 | 8_1:+39310217 | None:intergenic |
| CCTTGAAGCGAATTATATTC+GGG | 0.486169 | 8_1:+39310699 | None:intergenic |
| ATCAAGCCTCTGGTGAAGCT+TGG | 0.488088 | 8_1:-39311143 | Msa1193140:CDS |
| ACCCATTATGTCATGCTAGT+TGG | 0.497773 | 8_1:-39310218 | Msa1193140:CDS |
| GACATAATGGGTCACTCCAC+AGG | 0.498563 | 8_1:+39310229 | None:intergenic |
| CCTTTGACCGGCCTAGATAC+CGG | 0.512013 | 8_1:+39309458 | None:intergenic |
| GAATTGCACCATCAAGCCTC+TGG | 0.521090 | 8_1:-39311153 | Msa1193140:CDS |
| GAGCATATCCCTTTGAGGAT+CGG | 0.523974 | 8_1:-39310196 | Msa1193140:CDS |
| GGCGAAAGAAATATCTAGCC+AGG | 0.532371 | 8_1:+39310383 | None:intergenic |
| GATAATGAAAATTGTGGGAG+AGG | 0.536919 | 8_1:-39309495 | Msa1193140:CDS |
| AGTTGGAGCATATCCCTTTG+AGG | 0.541202 | 8_1:-39310201 | Msa1193140:CDS |
| GGACGAGATAATGAAAATTG+TGG | 0.541311 | 8_1:-39309501 | Msa1193140:CDS |
| AGGGTCATCCCGATCCTCAA+AGG | 0.547475 | 8_1:+39310187 | None:intergenic |
| GACGAGATAATGAAAATTGT+GGG | 0.549780 | 8_1:-39309500 | Msa1193140:CDS |
| GGGTCATCCCGATCCTCAAA+GGG | 0.551772 | 8_1:+39310188 | None:intergenic |
| TTATCAACCACAGATCTCTT+CGG | 0.555612 | 8_1:-39310724 | Msa1193140:CDS |
| ACCGGCCTAGATACCGGAGG+AGG | 0.562102 | 8_1:+39309464 | None:intergenic |
| AATGGACACCAGATATCAGC+TGG | 0.565150 | 8_1:+39310362 | None:intergenic |
| ATAGTAACACAATATGCAGC+TGG | 0.566363 | 8_1:-39310544 | Msa1193140:CDS |
| TTTCCAGATTGATGAGAATG+TGG | 0.567042 | 8_1:-39310756 | Msa1193140:intron |
| TGTCCATTACTGTCATGCTA+TGG | 0.568349 | 8_1:-39310347 | Msa1193140:intron |
| TTTGAGAGGACCTGTAATGC+TGG | 0.569556 | 8_1:-39310511 | Msa1193140:CDS |
| TTGGCTGATGTGTGGTCCTG+TGG | 0.571735 | 8_1:-39310245 | Msa1193140:CDS |
| AGAGGCAAGAGAACCTCCTC+CGG | 0.578941 | 8_1:-39309477 | Msa1193140:CDS |
| GGTGAAGCTTGGCTTTCTCG+AGG | 0.584023 | 8_1:-39311132 | Msa1193140:intron |
| AGAGGACCTGTAATGCTGGT+CGG | 0.592162 | 8_1:-39310507 | Msa1193140:CDS |
| GAGATATGTGAACATAATCA+GGG | 0.595221 | 8_1:+39310022 | None:intergenic |
| ATACCATAGCATGACAGTAA+TGG | 0.599580 | 8_1:+39310344 | None:intergenic |
| AACACAATATGCAGCTGGAG+GGG | 0.600335 | 8_1:-39310539 | Msa1193140:CDS |
| CAACAAATATACGAGATAGG+AGG | 0.614585 | 8_1:+39309986 | None:intergenic |
| TAACACAATATGCAGCTGGA+GGG | 0.615840 | 8_1:-39310540 | Msa1193140:CDS |
| TACTATTGCTAAATGATTAG+GGG | 0.616535 | 8_1:+39310561 | None:intergenic |
| ATGAGGTTAATAACTTGACA+TGG | 0.624734 | 8_1:-39310474 | Msa1193140:CDS |
| TGGTCGGTTCAGCGAAGATG+AGG | 0.629226 | 8_1:-39310491 | Msa1193140:CDS |
| CTGGAGGGGAACTCTTTGAG+AGG | 0.634190 | 8_1:-39310525 | Msa1193140:CDS |
| TATCTAGCCAGGATAAACAA+AGG | 0.637984 | 8_1:+39310394 | None:intergenic |
| GTAACACAATATGCAGCTGG+AGG | 0.654060 | 8_1:-39310541 | Msa1193140:CDS |
| TCGGGTGCCGAAGAGATCTG+TGG | 0.687028 | 8_1:+39310717 | None:intergenic |
| CAAGCTGCATATTACCAGAG+AGG | 0.690799 | 8_1:-39309552 | Msa1193140:CDS |
| AGAAAGCCAAGCTTCACCAG+AGG | 0.702351 | 8_1:+39311137 | None:intergenic |
| GAATATAATTCGCTTCAAGG+AGG | 0.726990 | 8_1:-39310696 | Msa1193140:intron |
| TTGACCGGCCTAGATACCGG+AGG | 0.733082 | 8_1:+39309461 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTGTAAAATTATAC+AGG | - | chr8_1:39310314-39310333 | Msa1193140:intron | 10.0% |
| !!! | ATTTTTTTGTAAAATTATAC+AGG | - | chr8_1:39310314-39310333 | Msa1193140:intron | 10.0% |
| !!! | ATAATAACTTTTCAAAATCA+GGG | + | chr8_1:39309779-39309798 | None:intergenic | 15.0% |
| !!! | AATAATAACTTTTCAAAATC+AGG | + | chr8_1:39309780-39309799 | None:intergenic | 15.0% |
| !!! | TTGTTTTCATAAAATTTCTA+GGG | + | chr8_1:39310460-39310479 | None:intergenic | 15.0% |
| !!! | ATTGTTTTCATAAAATTTCT+AGG | + | chr8_1:39310461-39310480 | None:intergenic | 15.0% |
| !!! | ATAATAACTTTTCAAAATCA+GGG | + | chr8_1:39309779-39309798 | None:intergenic | 15.0% |
| !!! | AATAATAACTTTTCAAAATC+AGG | + | chr8_1:39309780-39309799 | None:intergenic | 15.0% |
| !!! | TTGTTTTCATAAAATTTCTA+GGG | + | chr8_1:39310460-39310479 | None:intergenic | 15.0% |
| !!! | ATTGTTTTCATAAAATTTCT+AGG | + | chr8_1:39310461-39310480 | None:intergenic | 15.0% |
| !! | ACCAATGTTTATTAAAATAG+GGG | + | chr8_1:39309625-39309644 | None:intergenic | 20.0% |
| !! | CACCAATGTTTATTAAAATA+GGG | + | chr8_1:39309626-39309645 | None:intergenic | 20.0% |
| !! | CAAATTAAAGAAATTGAACA+GGG | - | chr8_1:39309706-39309725 | Msa1193140:intron | 20.0% |
| !! | AAATTAAAGAAATTGAACAG+GGG | - | chr8_1:39309707-39309726 | Msa1193140:intron | 20.0% |
| !!! | TAATAACTTTTCAAAATCAG+GGG | + | chr8_1:39309778-39309797 | None:intergenic | 20.0% |
| !! | TTACTATTGCTAAATGATTA+GGG | + | chr8_1:39310068-39310087 | None:intergenic | 20.0% |
| !!! | AAATTTTATGAAAACAATCC+AGG | - | chr8_1:39310463-39310482 | Msa1193140:CDS | 20.0% |
| !!! | ATTTTTCTATTGTTACAGTA+TGG | - | chr8_1:39310706-39310725 | Msa1193140:CDS | 20.0% |
| !! | ATGGTGAAAATAATAAGTTT+GGG | + | chr8_1:39310969-39310988 | None:intergenic | 20.0% |
| !! | AATGGTGAAAATAATAAGTT+TGG | + | chr8_1:39310970-39310989 | None:intergenic | 20.0% |
| !! | ACCAATGTTTATTAAAATAG+GGG | + | chr8_1:39309625-39309644 | None:intergenic | 20.0% |
| !! | CACCAATGTTTATTAAAATA+GGG | + | chr8_1:39309626-39309645 | None:intergenic | 20.0% |
| !! | CAAATTAAAGAAATTGAACA+GGG | - | chr8_1:39309706-39309725 | Msa1193140:intron | 20.0% |
| !! | AAATTAAAGAAATTGAACAG+GGG | - | chr8_1:39309707-39309726 | Msa1193140:intron | 20.0% |
| !!! | TAATAACTTTTCAAAATCAG+GGG | + | chr8_1:39309778-39309797 | None:intergenic | 20.0% |
| !! | TTACTATTGCTAAATGATTA+GGG | + | chr8_1:39310068-39310087 | None:intergenic | 20.0% |
| !!! | AAATTTTATGAAAACAATCC+AGG | - | chr8_1:39310463-39310482 | Msa1193140:CDS | 20.0% |
| !!! | ATTTTTCTATTGTTACAGTA+TGG | - | chr8_1:39310706-39310725 | Msa1193140:CDS | 20.0% |
| !! | ATGGTGAAAATAATAAGTTT+GGG | + | chr8_1:39310969-39310988 | None:intergenic | 20.0% |
| !! | AATGGTGAAAATAATAAGTT+TGG | + | chr8_1:39310970-39310989 | None:intergenic | 20.0% |
| !!! | AGACCATTTTTTCTCTTAAA+AGG | - | chr8_1:39309584-39309603 | Msa1193140:CDS | 25.0% |
| !!! | GACCATTTTTTCTCTTAAAA+GGG | - | chr8_1:39309585-39309604 | Msa1193140:CDS | 25.0% |
| !!! | AACCCTTTTAAGAGAAAAAA+TGG | + | chr8_1:39309590-39309609 | None:intergenic | 25.0% |
| !!! | TCCCCTATTTTAATAAACAT+TGG | - | chr8_1:39309621-39309640 | Msa1193140:intron | 25.0% |
| ! | CCACCAATGTTTATTAAAAT+AGG | + | chr8_1:39309627-39309646 | None:intergenic | 25.0% |
| !!! | CCTATTTTAATAAACATTGG+TGG | - | chr8_1:39309624-39309643 | Msa1193140:intron | 25.0% |
| ! | GCAAATTAAAGAAATTGAAC+AGG | - | chr8_1:39309705-39309724 | Msa1193140:intron | 25.0% |
| !!! | AAAGCTATTATTTTGACATC+TGG | - | chr8_1:39309809-39309828 | Msa1193140:intron | 25.0% |
| !!! | AAGCTATTATTTTGACATCT+GGG | - | chr8_1:39309810-39309829 | Msa1193140:intron | 25.0% |
| !! | TTGTTAACTGTTACTTCAAT+GGG | - | chr8_1:39310016-39310035 | Msa1193140:CDS | 25.0% |
| ! | TACTATTGCTAAATGATTAG+GGG | + | chr8_1:39310067-39310086 | None:intergenic | 25.0% |
| ! | GTTACTATTGCTAAATGATT+AGG | + | chr8_1:39310069-39310088 | None:intergenic | 25.0% |
| !!! | TATTTTTCCTTTGTTTATCC+TGG | - | chr8_1:39310224-39310243 | Msa1193140:CDS | 25.0% |
| !! | TATTTGTTGCTAATCCATTA+AGG | - | chr8_1:39310653-39310672 | Msa1193140:intron | 25.0% |
| !! | ATTTGTTGCTAATCCATTAA+GGG | - | chr8_1:39310654-39310673 | Msa1193140:intron | 25.0% |
| ! | ATCTATTAGGATTGACTAAT+TGG | + | chr8_1:39310924-39310943 | None:intergenic | 25.0% |
| ! | TCTACACATAATTTCTCTTA+AGG | - | chr8_1:39310991-39311010 | Msa1193140:intron | 25.0% |
| !! | GATTCTTTAAAAACTATGGA+TGG | + | chr8_1:39311027-39311046 | None:intergenic | 25.0% |
| !! | GGAAGATTCTTTAAAAACTA+TGG | + | chr8_1:39311031-39311050 | None:intergenic | 25.0% |
| !!! | AGTTTTTAAAGAATCTTCCA+AGG | - | chr8_1:39311032-39311051 | Msa1193140:intron | 25.0% |
| !!! | GTTTTTAAAGAATCTTCCAA+GGG | - | chr8_1:39311033-39311052 | Msa1193140:intron | 25.0% |
| !!! | AGACCATTTTTTCTCTTAAA+AGG | - | chr8_1:39309584-39309603 | Msa1193140:CDS | 25.0% |
| !!! | GACCATTTTTTCTCTTAAAA+GGG | - | chr8_1:39309585-39309604 | Msa1193140:CDS | 25.0% |
| !!! | AACCCTTTTAAGAGAAAAAA+TGG | + | chr8_1:39309590-39309609 | None:intergenic | 25.0% |
| !!! | TCCCCTATTTTAATAAACAT+TGG | - | chr8_1:39309621-39309640 | Msa1193140:intron | 25.0% |
| ! | CCACCAATGTTTATTAAAAT+AGG | + | chr8_1:39309627-39309646 | None:intergenic | 25.0% |
| !!! | CCTATTTTAATAAACATTGG+TGG | - | chr8_1:39309624-39309643 | Msa1193140:intron | 25.0% |
| ! | GCAAATTAAAGAAATTGAAC+AGG | - | chr8_1:39309705-39309724 | Msa1193140:intron | 25.0% |
| !!! | AAAGCTATTATTTTGACATC+TGG | - | chr8_1:39309809-39309828 | Msa1193140:intron | 25.0% |
| !!! | AAGCTATTATTTTGACATCT+GGG | - | chr8_1:39309810-39309829 | Msa1193140:intron | 25.0% |
| !! | TTGTTAACTGTTACTTCAAT+GGG | - | chr8_1:39310016-39310035 | Msa1193140:CDS | 25.0% |
| ! | TACTATTGCTAAATGATTAG+GGG | + | chr8_1:39310067-39310086 | None:intergenic | 25.0% |
| ! | GTTACTATTGCTAAATGATT+AGG | + | chr8_1:39310069-39310088 | None:intergenic | 25.0% |
| !!! | TATTTTTCCTTTGTTTATCC+TGG | - | chr8_1:39310224-39310243 | Msa1193140:CDS | 25.0% |
| !! | TATTTGTTGCTAATCCATTA+AGG | - | chr8_1:39310653-39310672 | Msa1193140:intron | 25.0% |
| !! | ATTTGTTGCTAATCCATTAA+GGG | - | chr8_1:39310654-39310673 | Msa1193140:intron | 25.0% |
| ! | ATCTATTAGGATTGACTAAT+TGG | + | chr8_1:39310924-39310943 | None:intergenic | 25.0% |
| ! | TCTACACATAATTTCTCTTA+AGG | - | chr8_1:39310991-39311010 | Msa1193140:intron | 25.0% |
| !! | GATTCTTTAAAAACTATGGA+TGG | + | chr8_1:39311027-39311046 | None:intergenic | 25.0% |
| !! | GGAAGATTCTTTAAAAACTA+TGG | + | chr8_1:39311031-39311050 | None:intergenic | 25.0% |
| !!! | AGTTTTTAAAGAATCTTCCA+AGG | - | chr8_1:39311032-39311051 | Msa1193140:intron | 25.0% |
| !!! | GTTTTTAAAGAATCTTCCAA+GGG | - | chr8_1:39311033-39311052 | Msa1193140:intron | 25.0% |
| TCCTTGAAGCGAATTATATT+CGG | + | chr8_1:39309930-39309949 | None:intergenic | 30.0% | |
| ! | GACTTTATTTGTTTACCTGT+TGG | - | chr8_1:39309956-39309975 | Msa1193140:intron | 30.0% |
| ! | GTTGTTAACTGTTACTTCAA+TGG | - | chr8_1:39310015-39310034 | Msa1193140:CDS | 30.0% |
| ! | TGTTAACTGTTACTTCAATG+GGG | - | chr8_1:39310017-39310036 | Msa1193140:CDS | 30.0% |
| ATGAGGTTAATAACTTGACA+TGG | - | chr8_1:39310151-39310170 | Msa1193140:intron | 30.0% | |
| CTGCAAAAGAAGATATGAAA+TGG | + | chr8_1:39310557-39310576 | None:intergenic | 30.0% | |
| GAGATATGTGAACATAATCA+GGG | + | chr8_1:39310606-39310625 | None:intergenic | 30.0% | |
| TGAGATATGTGAACATAATC+AGG | + | chr8_1:39310607-39310626 | None:intergenic | 30.0% | |
| TAGCAACAAATATACGAGAT+AGG | + | chr8_1:39310645-39310664 | None:intergenic | 30.0% | |
| TCATCAAAACATACCCTTAA+TGG | + | chr8_1:39310670-39310689 | None:intergenic | 30.0% | |
| ! | ACTGTTTTCATAAGCTATCT+TGG | - | chr8_1:39310794-39310813 | Msa1193140:intron | 30.0% |
| TAAGAACTTGTGAGATTGTT+TGG | + | chr8_1:39310885-39310904 | None:intergenic | 30.0% | |
| AACAATCTCACAAGTTCTTA+CGG | - | chr8_1:39310885-39310904 | Msa1193140:intron | 30.0% | |
| CGATAAACAATGGATCTATT+AGG | + | chr8_1:39310937-39310956 | None:intergenic | 30.0% | |
| GAGAAATTATGTGTAGACAA+TGG | + | chr8_1:39310988-39311007 | None:intergenic | 30.0% | |
| CACTTTGAATAGAAAAGCTT+TGG | + | chr8_1:39311103-39311122 | None:intergenic | 30.0% | |
| ! | AAGCTTTTCTATTCAAAGTG+TGG | - | chr8_1:39311103-39311122 | Msa1193140:intron | 30.0% |
| GACGAGATAATGAAAATTGT+GGG | - | chr8_1:39311125-39311144 | Msa1193140:intron | 30.0% | |
| TCCTTGAAGCGAATTATATT+CGG | + | chr8_1:39309930-39309949 | None:intergenic | 30.0% | |
| ! | GACTTTATTTGTTTACCTGT+TGG | - | chr8_1:39309956-39309975 | Msa1193140:intron | 30.0% |
| ! | GTTGTTAACTGTTACTTCAA+TGG | - | chr8_1:39310015-39310034 | Msa1193140:CDS | 30.0% |
| ! | TGTTAACTGTTACTTCAATG+GGG | - | chr8_1:39310017-39310036 | Msa1193140:CDS | 30.0% |
| ATGAGGTTAATAACTTGACA+TGG | - | chr8_1:39310151-39310170 | Msa1193140:intron | 30.0% | |
| CTGCAAAAGAAGATATGAAA+TGG | + | chr8_1:39310557-39310576 | None:intergenic | 30.0% | |
| GAGATATGTGAACATAATCA+GGG | + | chr8_1:39310606-39310625 | None:intergenic | 30.0% | |
| TGAGATATGTGAACATAATC+AGG | + | chr8_1:39310607-39310626 | None:intergenic | 30.0% | |
| TAGCAACAAATATACGAGAT+AGG | + | chr8_1:39310645-39310664 | None:intergenic | 30.0% | |
| TCATCAAAACATACCCTTAA+TGG | + | chr8_1:39310670-39310689 | None:intergenic | 30.0% | |
| ! | ACTGTTTTCATAAGCTATCT+TGG | - | chr8_1:39310794-39310813 | Msa1193140:intron | 30.0% |
| TAAGAACTTGTGAGATTGTT+TGG | + | chr8_1:39310885-39310904 | None:intergenic | 30.0% | |
| AACAATCTCACAAGTTCTTA+CGG | - | chr8_1:39310885-39310904 | Msa1193140:intron | 30.0% | |
| CGATAAACAATGGATCTATT+AGG | + | chr8_1:39310937-39310956 | None:intergenic | 30.0% | |
| GAGAAATTATGTGTAGACAA+TGG | + | chr8_1:39310988-39311007 | None:intergenic | 30.0% | |
| CACTTTGAATAGAAAAGCTT+TGG | + | chr8_1:39311103-39311122 | None:intergenic | 30.0% | |
| ! | AAGCTTTTCTATTCAAAGTG+TGG | - | chr8_1:39311103-39311122 | Msa1193140:intron | 30.0% |
| GACGAGATAATGAAAATTGT+GGG | - | chr8_1:39311125-39311144 | Msa1193140:intron | 30.0% | |
| TTTGCACAAATGCATTGAAG+CGG | + | chr8_1:39309690-39309709 | None:intergenic | 35.0% | |
| TTTCCAGATTGATGAGAATG+TGG | - | chr8_1:39309869-39309888 | Msa1193140:intron | 35.0% | |
| TTATCAACCACAGATCTCTT+CGG | - | chr8_1:39309901-39309920 | Msa1193140:intron | 35.0% | |
| CCTTGAAGCGAATTATATTC+GGG | + | chr8_1:39309929-39309948 | None:intergenic | 35.0% | |
| GAATATAATTCGCTTCAAGG+AGG | - | chr8_1:39309929-39309948 | Msa1193140:intron | 35.0% | |
| TCAATACAAACTGATCCAAC+AGG | + | chr8_1:39309974-39309993 | None:intergenic | 35.0% | |
| !! | TACTTCAATGGGGTTTTGAT+TGG | - | chr8_1:39310027-39310046 | Msa1193140:CDS | 35.0% |
| ATAGTAACACAATATGCAGC+TGG | - | chr8_1:39310081-39310100 | Msa1193140:intron | 35.0% | |
| TATCTAGCCAGGATAAACAA+AGG | + | chr8_1:39310234-39310253 | None:intergenic | 35.0% | |
| ATACCATAGCATGACAGTAA+TGG | + | chr8_1:39310284-39310303 | None:intergenic | 35.0% | |
| !!! | GTGAGAACCTATGTTTTAGT+TGG | - | chr8_1:39310361-39310380 | Msa1193140:CDS | 35.0% |
| ACATCAGCCAACTAAAACAT+AGG | + | chr8_1:39310371-39310390 | None:intergenic | 35.0% | |
| TCCAACTAGCATGACATAAT+GGG | + | chr8_1:39310411-39310430 | None:intergenic | 35.0% | |
| TGTATGAGATGTAACATACC+TGG | + | chr8_1:39310484-39310503 | None:intergenic | 35.0% | |
| ! | TCTTCTTTTGCAGCTCATAA+TGG | - | chr8_1:39310564-39310583 | Msa1193140:CDS | 35.0% |
| CAACAAATATACGAGATAGG+AGG | + | chr8_1:39310642-39310661 | None:intergenic | 35.0% | |
| ATACGTTAATGTGTCATCTC+TGG | - | chr8_1:39310729-39310748 | Msa1193140:CDS | 35.0% | |
| AACAAGCTGAAAACCGTTTA+TGG | - | chr8_1:39310829-39310848 | Msa1193140:intron | 35.0% | |
| GCTTATGACATGTCCATAAA+CGG | + | chr8_1:39310845-39310864 | None:intergenic | 35.0% | |
| GTAGTTAGCTCGATAAACAA+TGG | + | chr8_1:39310947-39310966 | None:intergenic | 35.0% | |
| GGACGAGATAATGAAAATTG+TGG | - | chr8_1:39311124-39311143 | Msa1193140:intron | 35.0% | |
| GATAATGAAAATTGTGGGAG+AGG | - | chr8_1:39311130-39311149 | Msa1193140:intron | 35.0% | |
| TTTGCACAAATGCATTGAAG+CGG | + | chr8_1:39309690-39309709 | None:intergenic | 35.0% | |
| TTTCCAGATTGATGAGAATG+TGG | - | chr8_1:39309869-39309888 | Msa1193140:intron | 35.0% | |
| TTATCAACCACAGATCTCTT+CGG | - | chr8_1:39309901-39309920 | Msa1193140:intron | 35.0% | |
| CCTTGAAGCGAATTATATTC+GGG | + | chr8_1:39309929-39309948 | None:intergenic | 35.0% | |
| GAATATAATTCGCTTCAAGG+AGG | - | chr8_1:39309929-39309948 | Msa1193140:intron | 35.0% | |
| TCAATACAAACTGATCCAAC+AGG | + | chr8_1:39309974-39309993 | None:intergenic | 35.0% | |
| !! | TACTTCAATGGGGTTTTGAT+TGG | - | chr8_1:39310027-39310046 | Msa1193140:CDS | 35.0% |
| ATAGTAACACAATATGCAGC+TGG | - | chr8_1:39310081-39310100 | Msa1193140:intron | 35.0% | |
| TATCTAGCCAGGATAAACAA+AGG | + | chr8_1:39310234-39310253 | None:intergenic | 35.0% | |
| ATACCATAGCATGACAGTAA+TGG | + | chr8_1:39310284-39310303 | None:intergenic | 35.0% | |
| !!! | GTGAGAACCTATGTTTTAGT+TGG | - | chr8_1:39310361-39310380 | Msa1193140:CDS | 35.0% |
| ACATCAGCCAACTAAAACAT+AGG | + | chr8_1:39310371-39310390 | None:intergenic | 35.0% | |
| TCCAACTAGCATGACATAAT+GGG | + | chr8_1:39310411-39310430 | None:intergenic | 35.0% | |
| TGTATGAGATGTAACATACC+TGG | + | chr8_1:39310484-39310503 | None:intergenic | 35.0% | |
| ! | TCTTCTTTTGCAGCTCATAA+TGG | - | chr8_1:39310564-39310583 | Msa1193140:CDS | 35.0% |
| CAACAAATATACGAGATAGG+AGG | + | chr8_1:39310642-39310661 | None:intergenic | 35.0% | |
| ATACGTTAATGTGTCATCTC+TGG | - | chr8_1:39310729-39310748 | Msa1193140:CDS | 35.0% | |
| AACAAGCTGAAAACCGTTTA+TGG | - | chr8_1:39310829-39310848 | Msa1193140:intron | 35.0% | |
| GCTTATGACATGTCCATAAA+CGG | + | chr8_1:39310845-39310864 | None:intergenic | 35.0% | |
| GTAGTTAGCTCGATAAACAA+TGG | + | chr8_1:39310947-39310966 | None:intergenic | 35.0% | |
| GGACGAGATAATGAAAATTG+TGG | - | chr8_1:39311124-39311143 | Msa1193140:intron | 35.0% | |
| GATAATGAAAATTGTGGGAG+AGG | - | chr8_1:39311130-39311149 | Msa1193140:intron | 35.0% | |
| TTGCCTTGAATACCGATACT+CGG | - | chr8_1:39309517-39309536 | Msa1193140:CDS | 40.0% | |
| !! | ATACCGAGTATCGGTATTCA+AGG | + | chr8_1:39309523-39309542 | None:intergenic | 40.0% |
| AAGCGGCCTAAAAAATTCGA+GGG | + | chr8_1:39309673-39309692 | None:intergenic | 40.0% | |
| TAGCCACATTCTCATCAATC+TGG | + | chr8_1:39309875-39309894 | None:intergenic | 40.0% | |
| CCCGAATATAATTCGCTTCA+AGG | - | chr8_1:39309926-39309945 | Msa1193140:intron | 40.0% | |
| TAATTCGCTTCAAGGAGGTA+AGG | - | chr8_1:39309934-39309953 | Msa1193140:intron | 40.0% | |
| TAACACAATATGCAGCTGGA+GGG | - | chr8_1:39310085-39310104 | Msa1193140:intron | 40.0% | |
| TGTCCATTACTGTCATGCTA+TGG | - | chr8_1:39310278-39310297 | Msa1193140:intron | 40.0% | |
| !!! | TGTTTTAGTTGGCTGATGTG+TGG | - | chr8_1:39310372-39310391 | Msa1193140:CDS | 40.0% |
| ACCCATTATGTCATGCTAGT+TGG | - | chr8_1:39310407-39310426 | Msa1193140:CDS | 40.0% | |
| CTCCAACTAGCATGACATAA+TGG | + | chr8_1:39310412-39310431 | None:intergenic | 40.0% | |
| TTGCCTTGAATACCGATACT+CGG | - | chr8_1:39309517-39309536 | Msa1193140:CDS | 40.0% | |
| !! | ATACCGAGTATCGGTATTCA+AGG | + | chr8_1:39309523-39309542 | None:intergenic | 40.0% |
| AAGCGGCCTAAAAAATTCGA+GGG | + | chr8_1:39309673-39309692 | None:intergenic | 40.0% | |
| TAGCCACATTCTCATCAATC+TGG | + | chr8_1:39309875-39309894 | None:intergenic | 40.0% | |
| CCCGAATATAATTCGCTTCA+AGG | - | chr8_1:39309926-39309945 | Msa1193140:intron | 40.0% | |
| TAATTCGCTTCAAGGAGGTA+AGG | - | chr8_1:39309934-39309953 | Msa1193140:intron | 40.0% | |
| TAACACAATATGCAGCTGGA+GGG | - | chr8_1:39310085-39310104 | Msa1193140:intron | 40.0% | |
| TGTCCATTACTGTCATGCTA+TGG | - | chr8_1:39310278-39310297 | Msa1193140:intron | 40.0% | |
| !!! | TGTTTTAGTTGGCTGATGTG+TGG | - | chr8_1:39310372-39310391 | Msa1193140:CDS | 40.0% |
| ACCCATTATGTCATGCTAGT+TGG | - | chr8_1:39310407-39310426 | Msa1193140:CDS | 40.0% | |
| CTCCAACTAGCATGACATAA+TGG | + | chr8_1:39310412-39310431 | None:intergenic | 40.0% | |
| GGAGCATGAATACCGAGTAT+CGG | + | chr8_1:39309532-39309551 | None:intergenic | 45.0% | |
| TCGAGATTATTCTAGCCAGG+AGG | + | chr8_1:39309553-39309572 | None:intergenic | 45.0% | |
| TCCTGGCTAGAATAATCTCG+AGG | - | chr8_1:39309552-39309571 | Msa1193140:CDS | 45.0% | |
| ACCTCGAGATTATTCTAGCC+AGG | + | chr8_1:39309556-39309575 | None:intergenic | 45.0% | |
| !!! | GAGCAGCCCTCGAATTTTTT+AGG | - | chr8_1:39309664-39309683 | Msa1193140:intron | 45.0% |
| GAAGCGGCCTAAAAAATTCG+AGG | + | chr8_1:39309674-39309693 | None:intergenic | 45.0% | |
| !!! | CAATGGGGTTTTGATTGGTC+AGG | - | chr8_1:39310032-39310051 | Msa1193140:CDS | 45.0% |
| GTAACACAATATGCAGCTGG+AGG | - | chr8_1:39310084-39310103 | Msa1193140:intron | 45.0% | |
| AACACAATATGCAGCTGGAG+GGG | - | chr8_1:39310086-39310105 | Msa1193140:intron | 45.0% | |
| TTTGAGAGGACCTGTAATGC+TGG | - | chr8_1:39310114-39310133 | Msa1193140:intron | 45.0% | |
| GGCGAAAGAAATATCTAGCC+AGG | + | chr8_1:39310245-39310264 | None:intergenic | 45.0% | |
| TTCTTTCGCCAGCTGATATC+TGG | - | chr8_1:39310255-39310274 | Msa1193140:intron | 45.0% | |
| AATGGACACCAGATATCAGC+TGG | + | chr8_1:39310266-39310285 | None:intergenic | 45.0% | |
| AGTTGGAGCATATCCCTTTG+AGG | - | chr8_1:39310424-39310443 | Msa1193140:CDS | 45.0% | |
| ! | GAGCATATCCCTTTGAGGAT+CGG | - | chr8_1:39310429-39310448 | Msa1193140:CDS | 45.0% |
| ! | AGCATATCCCTTTGAGGATC+GGG | - | chr8_1:39310430-39310449 | Msa1193140:CDS | 45.0% |
| CAAGCTGCATATTACCAGAG+AGG | - | chr8_1:39311073-39311092 | Msa1193140:intron | 45.0% | |
| !! | AAAGCTTTGGATTGCCTCTC+TGG | + | chr8_1:39311090-39311109 | None:intergenic | 45.0% |
| GGAGCATGAATACCGAGTAT+CGG | + | chr8_1:39309532-39309551 | None:intergenic | 45.0% | |
| TCGAGATTATTCTAGCCAGG+AGG | + | chr8_1:39309553-39309572 | None:intergenic | 45.0% | |
| TCCTGGCTAGAATAATCTCG+AGG | - | chr8_1:39309552-39309571 | Msa1193140:CDS | 45.0% | |
| ACCTCGAGATTATTCTAGCC+AGG | + | chr8_1:39309556-39309575 | None:intergenic | 45.0% | |
| !!! | GAGCAGCCCTCGAATTTTTT+AGG | - | chr8_1:39309664-39309683 | Msa1193140:intron | 45.0% |
| GAAGCGGCCTAAAAAATTCG+AGG | + | chr8_1:39309674-39309693 | None:intergenic | 45.0% | |
| !!! | CAATGGGGTTTTGATTGGTC+AGG | - | chr8_1:39310032-39310051 | Msa1193140:CDS | 45.0% |
| GTAACACAATATGCAGCTGG+AGG | - | chr8_1:39310084-39310103 | Msa1193140:intron | 45.0% | |
| AACACAATATGCAGCTGGAG+GGG | - | chr8_1:39310086-39310105 | Msa1193140:intron | 45.0% | |
| TTTGAGAGGACCTGTAATGC+TGG | - | chr8_1:39310114-39310133 | Msa1193140:intron | 45.0% | |
| GGCGAAAGAAATATCTAGCC+AGG | + | chr8_1:39310245-39310264 | None:intergenic | 45.0% | |
| TTCTTTCGCCAGCTGATATC+TGG | - | chr8_1:39310255-39310274 | Msa1193140:intron | 45.0% | |
| AATGGACACCAGATATCAGC+TGG | + | chr8_1:39310266-39310285 | None:intergenic | 45.0% | |
| AGTTGGAGCATATCCCTTTG+AGG | - | chr8_1:39310424-39310443 | Msa1193140:CDS | 45.0% | |
| ! | GAGCATATCCCTTTGAGGAT+CGG | - | chr8_1:39310429-39310448 | Msa1193140:CDS | 45.0% |
| ! | AGCATATCCCTTTGAGGATC+GGG | - | chr8_1:39310430-39310449 | Msa1193140:CDS | 45.0% |
| CAAGCTGCATATTACCAGAG+AGG | - | chr8_1:39311073-39311092 | Msa1193140:intron | 45.0% | |
| !! | AAAGCTTTGGATTGCCTCTC+TGG | + | chr8_1:39311090-39311109 | None:intergenic | 45.0% |
| GAATTGCACCATCAAGCCTC+TGG | - | chr8_1:39309472-39309491 | Msa1193140:CDS | 50.0% | |
| AAGCTTCACCAGAGGCTTGA+TGG | + | chr8_1:39309483-39309502 | None:intergenic | 50.0% | |
| ATCAAGCCTCTGGTGAAGCT+TGG | - | chr8_1:39309482-39309501 | Msa1193140:CDS | 50.0% | |
| AGAAAGCCAAGCTTCACCAG+AGG | + | chr8_1:39309491-39309510 | None:intergenic | 50.0% | |
| !!! | TGGGGTTTTGATTGGTCAGG+TGG | - | chr8_1:39310035-39310054 | Msa1193140:CDS | 50.0% |
| AGAGGACCTGTAATGCTGGT+CGG | - | chr8_1:39310118-39310137 | Msa1193140:intron | 50.0% | |
| !! | GACATAATGGGTCACTCCAC+AGG | + | chr8_1:39310399-39310418 | None:intergenic | 50.0% |
| ! | GCTGATTCAGTTAGCTCCCT+TGG | + | chr8_1:39311052-39311071 | None:intergenic | 50.0% |
| GAATTGCACCATCAAGCCTC+TGG | - | chr8_1:39309472-39309491 | Msa1193140:CDS | 50.0% | |
| AAGCTTCACCAGAGGCTTGA+TGG | + | chr8_1:39309483-39309502 | None:intergenic | 50.0% | |
| ATCAAGCCTCTGGTGAAGCT+TGG | - | chr8_1:39309482-39309501 | Msa1193140:CDS | 50.0% | |
| AGAAAGCCAAGCTTCACCAG+AGG | + | chr8_1:39309491-39309510 | None:intergenic | 50.0% | |
| !!! | TGGGGTTTTGATTGGTCAGG+TGG | - | chr8_1:39310035-39310054 | Msa1193140:CDS | 50.0% |
| AGAGGACCTGTAATGCTGGT+CGG | - | chr8_1:39310118-39310137 | Msa1193140:intron | 50.0% | |
| !! | GACATAATGGGTCACTCCAC+AGG | + | chr8_1:39310399-39310418 | None:intergenic | 50.0% |
| ! | GCTGATTCAGTTAGCTCCCT+TGG | + | chr8_1:39311052-39311071 | None:intergenic | 50.0% |
| ! | GGTGAAGCTTGGCTTTCTCG+AGG | - | chr8_1:39309493-39309512 | Msa1193140:CDS | 55.0% |
| CTCGGTATTCATGCTCCTCC+TGG | - | chr8_1:39309535-39309554 | Msa1193140:CDS | 55.0% | |
| CTGGAGGGGAACTCTTTGAG+AGG | - | chr8_1:39310100-39310119 | Msa1193140:intron | 55.0% | |
| GCTGAACCGACCAGCATTAC+AGG | + | chr8_1:39310127-39310146 | None:intergenic | 55.0% | |
| ! | TGGTCGGTTCAGCGAAGATG+AGG | - | chr8_1:39310134-39310153 | Msa1193140:intron | 55.0% |
| TTGGCTGATGTGTGGTCCTG+TGG | - | chr8_1:39310380-39310399 | Msa1193140:CDS | 55.0% | |
| GGGTCATCCCGATCCTCAAA+GGG | + | chr8_1:39310440-39310459 | None:intergenic | 55.0% | |
| AGGGTCATCCCGATCCTCAA+AGG | + | chr8_1:39310441-39310460 | None:intergenic | 55.0% | |
| AGAGGCAAGAGAACCTCCTC+CGG | - | chr8_1:39311148-39311167 | Msa1193140:CDS | 55.0% | |
| ! | GGTGAAGCTTGGCTTTCTCG+AGG | - | chr8_1:39309493-39309512 | Msa1193140:CDS | 55.0% |
| CTCGGTATTCATGCTCCTCC+TGG | - | chr8_1:39309535-39309554 | Msa1193140:CDS | 55.0% | |
| CTGGAGGGGAACTCTTTGAG+AGG | - | chr8_1:39310100-39310119 | Msa1193140:intron | 55.0% | |
| GCTGAACCGACCAGCATTAC+AGG | + | chr8_1:39310127-39310146 | None:intergenic | 55.0% | |
| ! | TGGTCGGTTCAGCGAAGATG+AGG | - | chr8_1:39310134-39310153 | Msa1193140:intron | 55.0% |
| TTGGCTGATGTGTGGTCCTG+TGG | - | chr8_1:39310380-39310399 | Msa1193140:CDS | 55.0% | |
| GGGTCATCCCGATCCTCAAA+GGG | + | chr8_1:39310440-39310459 | None:intergenic | 55.0% | |
| AGGGTCATCCCGATCCTCAA+AGG | + | chr8_1:39310441-39310460 | None:intergenic | 55.0% | |
| AGAGGCAAGAGAACCTCCTC+CGG | - | chr8_1:39311148-39311167 | Msa1193140:CDS | 55.0% | |
| !! | TCGGGTGCCGAAGAGATCTG+TGG | + | chr8_1:39309911-39309930 | None:intergenic | 60.0% |
| !! | TCGGGTGCCGAAGAGATCTG+TGG | + | chr8_1:39309911-39309930 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 39309470 | 39311177 | 39309470 | ID=Msa1193140;Name=Msa1193140 |
| chr8_1 | mRNA | 39309470 | 39311177 | 39309470 | ID=Msa1193140-mRNA-1;Parent=Msa1193140;Name=Msa1193140-mRNA-1;_AED=0.19;_eAED=0.32;_QI=0|0|0|0.83|0.8|0.83|6|0|234 |
| chr8_1 | exon | 39311133 | 39311177 | 39311133 | ID=Msa1193140-mRNA-1:exon:12889;Parent=Msa1193140-mRNA-1 |
| chr8_1 | exon | 39310697 | 39310771 | 39310697 | ID=Msa1193140-mRNA-1:exon:12888;Parent=Msa1193140-mRNA-1 |
| chr8_1 | exon | 39310348 | 39310593 | 39310348 | ID=Msa1193140-mRNA-1:exon:12887;Parent=Msa1193140-mRNA-1 |
| chr8_1 | exon | 39310163 | 39310267 | 39310163 | ID=Msa1193140-mRNA-1:exon:12886;Parent=Msa1193140-mRNA-1 |
| chr8_1 | exon | 39309972 | 39310070 | 39309972 | ID=Msa1193140-mRNA-1:exon:12885;Parent=Msa1193140-mRNA-1 |
| chr8_1 | exon | 39309470 | 39309604 | 39309470 | ID=Msa1193140-mRNA-1:exon:12884;Parent=Msa1193140-mRNA-1 |
| chr8_1 | CDS | 39311133 | 39311177 | 39311133 | ID=Msa1193140-mRNA-1:cds;Parent=Msa1193140-mRNA-1 |
| chr8_1 | CDS | 39310697 | 39310771 | 39310697 | ID=Msa1193140-mRNA-1:cds;Parent=Msa1193140-mRNA-1 |
| chr8_1 | CDS | 39310348 | 39310593 | 39310348 | ID=Msa1193140-mRNA-1:cds;Parent=Msa1193140-mRNA-1 |
| chr8_1 | CDS | 39310163 | 39310267 | 39310163 | ID=Msa1193140-mRNA-1:cds;Parent=Msa1193140-mRNA-1 |
| chr8_1 | CDS | 39309972 | 39310070 | 39309972 | ID=Msa1193140-mRNA-1:cds;Parent=Msa1193140-mRNA-1 |
| chr8_1 | CDS | 39309470 | 39309604 | 39309470 | ID=Msa1193140-mRNA-1:cds;Parent=Msa1193140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
