Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193500 | XP_013445993.1 | 90.187 | 428 | 32 | 2 | 1 | 428 | 1 | 418 | 0.0 | 798 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193500 | sp|Q0WNR2|BH090_ARATH | 33.482 | 448 | 252 | 11 | 3 | 426 | 10 | 435 | 2.07e-67 | 224 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193500 | A0A072U2K1 | 90.187 | 428 | 32 | 2 | 1 | 428 | 1 | 418 | 0.0 | 798 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1193500 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193500 | MtrunA17_Chr8g0365711 | 90.187 | 428 | 32 | 2 | 1 | 428 | 1 | 418 | 0.0 | 798 |
| Msa1193500 | MtrunA17_Chr1g0211081 | 29.615 | 520 | 265 | 16 | 3 | 431 | 9 | 518 | 1.24e-67 | 224 |
| Msa1193500 | MtrunA17_Chr2g0298751 | 33.898 | 177 | 104 | 4 | 244 | 414 | 51 | 220 | 2.37e-25 | 103 |
| Msa1193500 | MtrunA17_Chr3g0131691 | 30.455 | 220 | 127 | 5 | 218 | 425 | 270 | 475 | 3.79e-21 | 95.9 |
| Msa1193500 | MtrunA17_Chr4g0048851 | 29.508 | 244 | 119 | 6 | 180 | 423 | 12 | 202 | 2.91e-19 | 85.9 |
| Msa1193500 | MtrunA17_Chr2g0320291 | 32.099 | 162 | 92 | 4 | 237 | 397 | 125 | 269 | 7.13e-18 | 84.3 |
| Msa1193500 | MtrunA17_Chr4g0028071 | 30.061 | 163 | 100 | 2 | 236 | 397 | 140 | 289 | 7.85e-18 | 84.3 |
| Msa1193500 | MtrunA17_Chr7g0252041 | 31.183 | 186 | 120 | 4 | 244 | 425 | 285 | 466 | 1.84e-16 | 81.6 |
| Msa1193500 | MtrunA17_Chr4g0054571 | 29.439 | 214 | 127 | 6 | 225 | 426 | 129 | 330 | 1.09e-15 | 77.8 |
| Msa1193500 | MtrunA17_Chr4g0049331 | 27.843 | 255 | 159 | 9 | 159 | 408 | 50 | 284 | 9.02e-15 | 75.1 |
| Msa1193500 | MtrunA17_Chr4g0054581 | 25.309 | 162 | 111 | 4 | 247 | 408 | 200 | 351 | 8.41e-13 | 69.7 |
| Msa1193500 | MtrunA17_Chr5g0400661 | 26.190 | 168 | 111 | 3 | 247 | 408 | 151 | 311 | 1.54e-12 | 68.6 |
| Msa1193500 | MtrunA17_Chr2g0307131 | 27.027 | 185 | 117 | 4 | 228 | 408 | 158 | 328 | 2.39e-12 | 68.2 |
| Msa1193500 | MtrunA17_Chr7g0225901 | 24.540 | 163 | 107 | 3 | 247 | 408 | 90 | 237 | 4.81e-12 | 65.9 |
| Msa1193500 | MtrunA17_Chr4g0033391 | 25.904 | 166 | 98 | 4 | 247 | 408 | 149 | 293 | 5.55e-12 | 66.6 |
| Msa1193500 | MtrunA17_Chr2g0280161 | 27.778 | 162 | 104 | 3 | 247 | 408 | 179 | 327 | 5.61e-12 | 67.0 |
| Msa1193500 | MtrunA17_Chr4g0002801 | 22.124 | 339 | 220 | 11 | 96 | 426 | 29 | 331 | 1.19e-11 | 65.9 |
| Msa1193500 | MtrunA17_Chr5g0411541 | 26.214 | 206 | 121 | 4 | 223 | 426 | 140 | 316 | 1.29e-11 | 65.5 |
| Msa1193500 | MtrunA17_Chr5g0411341 | 27.329 | 161 | 109 | 3 | 249 | 409 | 497 | 649 | 1.37e-11 | 66.6 |
| Msa1193500 | MtrunA17_Chr8g0366751 | 28.108 | 185 | 120 | 6 | 250 | 431 | 467 | 641 | 3.10e-11 | 65.5 |
| Msa1193500 | MtrunA17_Chr5g0400621 | 25.654 | 191 | 120 | 6 | 226 | 408 | 130 | 306 | 5.14e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193500 | AT1G10610.1 | 33.482 | 448 | 252 | 11 | 3 | 426 | 10 | 435 | 2.10e-68 | 224 |
| Msa1193500 | AT1G10610.2 | 31.991 | 422 | 241 | 11 | 29 | 426 | 6 | 405 | 1.49e-53 | 185 |
| Msa1193500 | AT1G10610.3 | 29.526 | 359 | 213 | 9 | 87 | 426 | 1 | 338 | 1.00e-34 | 132 |
| Msa1193500 | AT2G16910.1 | 42.763 | 152 | 73 | 5 | 3 | 147 | 8 | 152 | 1.02e-34 | 136 |
| Msa1193500 | AT2G16910.1 | 35.874 | 223 | 133 | 4 | 216 | 428 | 284 | 506 | 1.99e-31 | 127 |
| Msa1193500 | AT5G57150.1 | 34.132 | 167 | 105 | 2 | 244 | 410 | 53 | 214 | 2.81e-27 | 109 |
| Msa1193500 | AT5G57150.2 | 33.333 | 168 | 107 | 2 | 244 | 411 | 54 | 216 | 3.75e-27 | 108 |
| Msa1193500 | AT5G57150.3 | 33.735 | 166 | 105 | 2 | 244 | 409 | 54 | 214 | 4.24e-27 | 108 |
| Msa1193500 | AT5G57150.5 | 33.735 | 166 | 105 | 2 | 244 | 409 | 53 | 213 | 4.33e-27 | 108 |
| Msa1193500 | AT5G57150.4 | 33.735 | 166 | 105 | 2 | 244 | 409 | 54 | 214 | 5.04e-27 | 109 |
| Msa1193500 | AT4G29930.6 | 28.743 | 167 | 100 | 2 | 244 | 410 | 53 | 200 | 2.77e-20 | 89.7 |
| Msa1193500 | AT4G29930.2 | 29.412 | 170 | 92 | 3 | 244 | 410 | 53 | 197 | 6.03e-20 | 89.0 |
| Msa1193500 | AT4G29930.5 | 29.240 | 171 | 93 | 3 | 244 | 411 | 53 | 198 | 6.55e-20 | 89.0 |
| Msa1193500 | AT4G29930.1 | 29.891 | 184 | 102 | 5 | 244 | 410 | 53 | 226 | 1.66e-19 | 88.2 |
| Msa1193500 | AT4G29930.3 | 29.730 | 185 | 103 | 5 | 244 | 411 | 53 | 227 | 1.80e-19 | 88.2 |
| Msa1193500 | AT4G29930.7 | 29.730 | 185 | 103 | 5 | 244 | 411 | 53 | 227 | 1.80e-19 | 88.2 |
| Msa1193500 | AT2G28160.1 | 30.189 | 159 | 98 | 3 | 240 | 397 | 126 | 272 | 9.70e-18 | 84.3 |
| Msa1193500 | AT2G28160.2 | 30.189 | 159 | 98 | 3 | 240 | 397 | 126 | 272 | 1.02e-17 | 84.0 |
| Msa1193500 | AT1G12860.1 | 30.769 | 195 | 103 | 4 | 244 | 425 | 266 | 441 | 1.72e-17 | 84.7 |
| Msa1193500 | AT3G26744.1 | 28.866 | 194 | 112 | 3 | 244 | 425 | 306 | 485 | 2.09e-16 | 81.6 |
| Msa1193500 | AT3G26744.4 | 28.866 | 194 | 112 | 3 | 244 | 425 | 306 | 485 | 2.09e-16 | 81.6 |
| Msa1193500 | AT3G26744.2 | 28.866 | 194 | 112 | 3 | 244 | 425 | 306 | 485 | 2.09e-16 | 81.6 |
| Msa1193500 | AT1G12860.2 | 31.638 | 177 | 91 | 3 | 244 | 409 | 266 | 423 | 3.38e-16 | 80.9 |
| Msa1193500 | AT4G29930.4 | 46.479 | 71 | 34 | 1 | 244 | 314 | 53 | 119 | 3.35e-15 | 74.3 |
| Msa1193500 | AT3G26744.6 | 28.977 | 176 | 101 | 2 | 244 | 409 | 306 | 467 | 4.46e-15 | 77.8 |
| Msa1193500 | AT4G21330.1 | 26.471 | 204 | 137 | 4 | 230 | 432 | 16 | 207 | 1.20e-13 | 70.1 |
| Msa1193500 | AT5G46760.1 | 26.606 | 218 | 123 | 5 | 230 | 427 | 387 | 587 | 2.07e-13 | 72.8 |
| Msa1193500 | AT4G37850.2 | 29.310 | 174 | 102 | 6 | 246 | 415 | 153 | 309 | 1.25e-12 | 69.3 |
| Msa1193500 | AT4G37850.1 | 29.310 | 174 | 102 | 6 | 246 | 415 | 153 | 309 | 1.25e-12 | 69.3 |
| Msa1193500 | AT4G17880.1 | 29.091 | 165 | 90 | 4 | 249 | 409 | 420 | 561 | 2.20e-12 | 69.7 |
| Msa1193500 | AT5G41315.1 | 24.022 | 179 | 123 | 3 | 233 | 400 | 429 | 605 | 3.72e-12 | 68.9 |
| Msa1193500 | AT5G41315.2 | 24.022 | 179 | 123 | 3 | 233 | 400 | 437 | 613 | 3.95e-12 | 68.9 |
| Msa1193500 | AT5G41315.3 | 24.022 | 179 | 123 | 3 | 233 | 400 | 434 | 610 | 4.01e-12 | 68.9 |
| Msa1193500 | AT1G32640.1 | 31.707 | 164 | 88 | 5 | 249 | 409 | 456 | 598 | 1.09e-11 | 67.4 |
| Msa1193500 | AT1G63650.3 | 26.111 | 180 | 102 | 4 | 237 | 400 | 400 | 564 | 2.05e-11 | 66.6 |
| Msa1193500 | AT1G63650.1 | 26.111 | 180 | 102 | 4 | 237 | 400 | 400 | 564 | 2.05e-11 | 66.6 |
| Msa1193500 | AT1G63650.2 | 26.111 | 180 | 102 | 4 | 237 | 400 | 400 | 564 | 2.05e-11 | 66.6 |
Find 81 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATATACCTTGGTTATATT+AGG | 0.201515 | 8_1:-39934115 | None:intergenic |
| TATGTTGTTGTTTGGAAATA+TGG | 0.204753 | 8_1:+39932877 | Msa1193500:CDS |
| TCAACAAGACCGCCAATAAT+AGG | 0.227144 | 8_1:-39933574 | None:intergenic |
| TTCACGGTATTTATATCTTC+TGG | 0.230774 | 8_1:-39933710 | None:intergenic |
| TTACAATGTCTCTTTATTCT+AGG | 0.232812 | 8_1:+39933281 | Msa1193500:CDS |
| ATCGGTGAGAGGTAGGTTTC+TGG | 0.265091 | 8_1:-39934526 | None:intergenic |
| AAAAGTTCTGAACATTCTTA+TGG | 0.297211 | 8_1:+39934862 | Msa1193500:CDS |
| GATATACCTTGGTTATATTA+GGG | 0.312920 | 8_1:-39934114 | None:intergenic |
| GAATAAAGAGACATTGTAAA+AGG | 0.329076 | 8_1:-39933277 | None:intergenic |
| CTTGGGATTATGTTGTTGTT+TGG | 0.348246 | 8_1:+39932869 | Msa1193500:CDS |
| TCGAGTGTCGATTGTGGAAA+TGG | 0.359972 | 8_1:+39933965 | Msa1193500:CDS |
| ATTGAAGCAATAGATTCATT+TGG | 0.361378 | 8_1:+39934800 | Msa1193500:CDS |
| GCAAACATGACCACATTTGA+TGG | 0.371124 | 8_1:+39934839 | Msa1193500:CDS |
| TCACGGTATTTATATCTTCT+GGG | 0.373046 | 8_1:-39933709 | None:intergenic |
| CAACAAGACCGCCAATAATA+GGG | 0.398653 | 8_1:-39933573 | None:intergenic |
| TGTAGGTTTATTGAGTGGTT+AGG | 0.409602 | 8_1:+39933112 | Msa1193500:intron |
| ACCTCATGGATAAGCCATCT+TGG | 0.422456 | 8_1:-39933431 | None:intergenic |
| GGCAAGAGCCTCACAAGTCT+TGG | 0.422588 | 8_1:-39933248 | None:intergenic |
| ATCATTTGGCTTCCATTTGT+AGG | 0.425186 | 8_1:+39933197 | Msa1193500:CDS |
| GGATGCGATTGAATATATAA+TGG | 0.425745 | 8_1:+39934386 | Msa1193500:CDS |
| ATCTTATCACAGAGAGGAAT+AGG | 0.438830 | 8_1:+39934047 | Msa1193500:CDS |
| AATTTGTGAAGAATATCATT+TGG | 0.442609 | 8_1:+39933183 | Msa1193500:CDS |
| CTTTGTTGAGAGGAAAGCTT+GGG | 0.443033 | 8_1:+39932852 | Msa1193500:CDS |
| AATGATAAGTGCTCAGTTGA+AGG | 0.446352 | 8_1:-39933845 | None:intergenic |
| TGGTTAGGTTGTTGCTGTTG+TGG | 0.457561 | 8_1:+39933127 | Msa1193500:CDS |
| TCTGAACATTCTTATGGTTG+AGG | 0.459060 | 8_1:+39934868 | Msa1193500:CDS |
| TCATTTGGCTTCCATTTGTA+GGG | 0.464580 | 8_1:+39933198 | Msa1193500:CDS |
| TATAAAGCAAGAAGCCATAT+CGG | 0.481509 | 8_1:+39933760 | Msa1193500:CDS |
| CTCCATTCGTGTCTTTCTAG+TGG | 0.481729 | 8_1:-39934571 | None:intergenic |
| ATGTGCTGATATGAACTTCA+CGG | 0.499222 | 8_1:-39933726 | None:intergenic |
| CCTTTGTTGAGAGGAAAGCT+TGG | 0.499952 | 8_1:+39932851 | Msa1193500:CDS |
| AGACATTGTAAAAGGAAGCT+TGG | 0.509673 | 8_1:-39933269 | None:intergenic |
| TGAGAAGGTGAAGTTGAAAG+AGG | 0.513233 | 8_1:+39933159 | Msa1193500:CDS |
| AGAATTTCAAGAAGAGGTCA+AGG | 0.513955 | 8_1:+39934428 | Msa1193500:CDS |
| TTTGTAGTGTGCTCTTCCCA+CGG | 0.515454 | 8_1:-39934467 | None:intergenic |
| CAAGAGGAATCAAGCATCCA+TGG | 0.518928 | 8_1:-39933877 | None:intergenic |
| ATCCCGCAGTTCAAGGCCTC+CGG | 0.520034 | 8_1:+39936291 | Msa1193500:intron |
| TTTGCCCCAGGCAACTGCGC+AGG | 0.520563 | 8_1:+39935608 | Msa1193500:intron |
| TTCTTAGACCCTTTGTTGAG+AGG | 0.521603 | 8_1:+39932842 | Msa1193500:CDS |
| TTAGGTTGTTGCTGTTGTGG+TGG | 0.522064 | 8_1:+39933130 | Msa1193500:CDS |
| TTATCATTTGATTCAAACCA+TGG | 0.523144 | 8_1:+39933860 | Msa1193500:CDS |
| CAAGCTTTCCTCTCAACAAA+GGG | 0.525491 | 8_1:-39932850 | None:intergenic |
| ATAAAATTTCAGCGAAACAT+CGG | 0.527179 | 8_1:+39933936 | Msa1193500:CDS |
| GGTCAAGGCTTTAGAAGTTG+AGG | 0.531075 | 8_1:+39934443 | Msa1193500:CDS |
| ACAAAGAGGCACATTCAAGT+TGG | 0.537557 | 8_1:-39936341 | None:intergenic |
| AAATAAAGAAAATATTGTAA+AGG | 0.541349 | 8_1:+39933994 | Msa1193500:CDS |
| AGAGAAAGAATTTCAAGAAG+AGG | 0.551008 | 8_1:+39934422 | Msa1193500:CDS |
| CCAAGCTTTCCTCTCAACAA+AGG | 0.551769 | 8_1:-39932851 | None:intergenic |
| TCTTGTGTAGGTTTATTGAG+TGG | 0.557166 | 8_1:+39933107 | Msa1193500:intron |
| TGTAGTTCGAGTGTCGATTG+TGG | 0.557198 | 8_1:+39933959 | Msa1193500:CDS |
| GCATGATACACTTTCTCTTG+AGG | 0.560146 | 8_1:-39934019 | None:intergenic |
| GTGATATTGCTACCTCTGCA+TGG | 0.560850 | 8_1:-39933403 | None:intergenic |
| GATCAAGATCGGTGAGAGGT+AGG | 0.562213 | 8_1:-39934533 | None:intergenic |
| GCTAAAATTGAAGTTCATGT+TGG | 0.562915 | 8_1:-39933795 | None:intergenic |
| AGACAAACTTTGATCAAGAT+CGG | 0.565224 | 8_1:-39934544 | None:intergenic |
| CTTTAGAAGTTGAGGACCGT+GGG | 0.594996 | 8_1:+39934451 | Msa1193500:CDS |
| CAATATCACAGCAACCAAGA+TGG | 0.602156 | 8_1:+39933417 | Msa1193500:CDS |
| GGTTGATTCAAATATTCAAG+AGG | 0.603504 | 8_1:-39933893 | None:intergenic |
| AGTATTTGATGCAGAAAACA+AGG | 0.604081 | 8_1:+39935655 | Msa1193500:CDS |
| ATTTCACAGAATTCTCCTAC+CGG | 0.611824 | 8_1:-39936310 | None:intergenic |
| GTAGAAGTGAATCATATCGC+CGG | 0.619401 | 8_1:+39934719 | Msa1193500:CDS |
| TTGTGCTGTGAGCAGAAGCA+AGG | 0.622053 | 8_1:+39934761 | Msa1193500:CDS |
| GCTTTAGAAGTTGAGGACCG+TGG | 0.622520 | 8_1:+39934450 | Msa1193500:CDS |
| TAATTTGACACTCAACAAAG+AGG | 0.624204 | 8_1:-39936355 | None:intergenic |
| AATATGGAAATGATCCAACT+AGG | 0.624297 | 8_1:+39932893 | Msa1193500:CDS |
| AATATATAATGGAATTGCAG+AGG | 0.626528 | 8_1:+39934397 | Msa1193500:CDS |
| AGGAGGAACAGAATAAAACA+AGG | 0.627576 | 8_1:+39934067 | Msa1193500:CDS |
| CGCAGTTCAAGGCCTCCGGT+AGG | 0.634634 | 8_1:+39936295 | Msa1193500:intron |
| AAAGACAAAGAACTTGCAGA+AGG | 0.635182 | 8_1:+39934501 | Msa1193500:CDS |
| GGACAGAGTAGCAATTCTTG+AGG | 0.640821 | 8_1:+39934365 | Msa1193500:CDS |
| GATCTACAGTATCCATGCAG+AGG | 0.649229 | 8_1:+39933391 | Msa1193500:intron |
| TTATCACAGAGAGGAATAGG+AGG | 0.649501 | 8_1:+39934050 | Msa1193500:CDS |
| TTCCACTAGAAAGACACGAA+TGG | 0.650464 | 8_1:+39934569 | Msa1193500:CDS |
| TCACAGAATTCTCCTACCGG+AGG | 0.653434 | 8_1:-39936307 | None:intergenic |
| AGTTAAAACCAAGACTTGTG+AGG | 0.657274 | 8_1:+39933240 | Msa1193500:CDS |
| ACCAAGATGGCTTATCCATG+AGG | 0.658504 | 8_1:+39933430 | Msa1193500:CDS |
| TCTAGTCCCTAATATAACCA+AGG | 0.659673 | 8_1:+39934108 | Msa1193500:CDS |
| CACTAGAAAGACACGAATGG+AGG | 0.670027 | 8_1:+39934572 | Msa1193500:CDS |
| CTTTGATCAAGATCGGTGAG+AGG | 0.681492 | 8_1:-39934537 | None:intergenic |
| TTGTGGTGGAAACATTGAGA+AGG | 0.683212 | 8_1:+39933144 | Msa1193500:CDS |
| GGAGGAACAGAATAAAACAA+GGG | 0.689769 | 8_1:+39934068 | Msa1193500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCAAATTTTAATACTTAT+TGG | + | chr8_1:39933621-39933640 | Msa1193500:intron | 10.0% |
| !! | AAATAAAGAAAATATTGTAA+AGG | + | chr8_1:39933994-39934013 | Msa1193500:CDS | 10.0% |
| !! | AAATATTAAGAGATTATATT+AGG | - | chr8_1:39934687-39934706 | None:intergenic | 10.0% |
| !! | AAACTAAATATAACAAAAAT+TGG | + | chr8_1:39936178-39936197 | Msa1193500:intron | 10.0% |
| !! | TTCTATATTTAATCATTGAA+AGG | + | chr8_1:39933347-39933366 | Msa1193500:intron | 15.0% |
| !! | AATTATGAACTTATATCATA+AGG | + | chr8_1:39933482-39933501 | Msa1193500:intron | 15.0% |
| !! | ATTATGAACTTATATCATAA+GGG | + | chr8_1:39933483-39933502 | Msa1193500:intron | 15.0% |
| !!! | AATTTTATTGTTTCTTTTCT+TGG | + | chr8_1:39934658-39934677 | Msa1193500:intron | 15.0% |
| !! | TAAATATAACAAAAATTGGA+GGG | + | chr8_1:39936182-39936201 | Msa1193500:intron | 15.0% |
| !! | ATGCAAATGAATAACAAAAT+GGG | - | chr8_1:39932928-39932947 | None:intergenic | 20.0% |
| !! | AATTTGTGAAGAATATCATT+TGG | + | chr8_1:39933183-39933202 | Msa1193500:CDS | 20.0% |
| !!! | TTTAACTTGATGATGAAAAA+GGG | - | chr8_1:39933227-39933246 | None:intergenic | 20.0% |
| !!! | TTTTAACTTGATGATGAAAA+AGG | - | chr8_1:39933228-39933247 | None:intergenic | 20.0% |
| !! | ACAAAAATTAATTTACCTCA+TGG | - | chr8_1:39933448-39933467 | None:intergenic | 20.0% |
| !! | TAAACAATTTAGATATACCT+TGG | - | chr8_1:39934128-39934147 | None:intergenic | 20.0% |
| !!! | ATTGTTTTTTTACTATGTCA+TGG | + | chr8_1:39934623-39934642 | Msa1193500:intron | 20.0% |
| !! | TCTAATTTAAATACTCAATC+TGG | - | chr8_1:39934994-39935013 | None:intergenic | 20.0% |
| !! | ATTGAGTATTTAAATTAGAC+AGG | + | chr8_1:39934995-39935014 | Msa1193500:intron | 20.0% |
| !!! | TAGTTTTTCAAAATTGTCTA+CGG | - | chr8_1:39935449-39935468 | None:intergenic | 20.0% |
| !! | AATTATGAAGTTTAGGAAAA+TGG | + | chr8_1:39935694-39935713 | Msa1193500:intron | 20.0% |
| !! | AATTGGTTATTATCTGTAAA+TGG | + | chr8_1:39935753-39935772 | Msa1193500:intron | 20.0% |
| !!! | ATTGAATATCCATTTTTTCT+TGG | + | chr8_1:39935818-39935837 | Msa1193500:intron | 20.0% |
| !!! | TTGAATATCCATTTTTTCTT+GGG | + | chr8_1:39935819-39935838 | Msa1193500:intron | 20.0% |
| !!! | AAGTAGTTTTTATAGTGATA+TGG | - | chr8_1:39935995-39936014 | None:intergenic | 20.0% |
| !! | GAAATTCTTAAATGTACATT+AGG | - | chr8_1:39936040-39936059 | None:intergenic | 20.0% |
| !! | ATCTCTATTACTAATGATTA+AGG | + | chr8_1:39936089-39936108 | Msa1193500:intron | 20.0% |
| !!! | TGTAAAAAGATAAGTTTTTG+AGG | - | chr8_1:39936120-39936139 | None:intergenic | 20.0% |
| !! | CTAAATATAACAAAAATTGG+AGG | + | chr8_1:39936181-39936200 | Msa1193500:intron | 20.0% |
| !!! | TATGTTGTTGTTTGGAAATA+TGG | + | chr8_1:39932877-39932896 | Msa1193500:CDS | 25.0% |
| ! | CATGCAAATGAATAACAAAA+TGG | - | chr8_1:39932929-39932948 | None:intergenic | 25.0% |
| ! | GAATAAAGAGACATTGTAAA+AGG | - | chr8_1:39933280-39933299 | None:intergenic | 25.0% |
| ! | TTACAATGTCTCTTTATTCT+AGG | + | chr8_1:39933281-39933300 | Msa1193500:CDS | 25.0% |
| ! | ATCATTGAAAGGAAATTCTA+AGG | + | chr8_1:39933358-39933377 | Msa1193500:intron | 25.0% |
| !! | GAGGTAAATTAATTTTTGTG+TGG | + | chr8_1:39933449-39933468 | Msa1193500:intron | 25.0% |
| !!! | TTAACTGTTAATGTTTTGAC+AGG | + | chr8_1:39933525-39933544 | Msa1193500:intron | 25.0% |
| !!! | CAAGTTTTAATCCCTATTAT+TGG | + | chr8_1:39933562-39933581 | Msa1193500:CDS | 25.0% |
| !!! | TACAATCATTTTAGAACAGA+AGG | - | chr8_1:39933652-39933671 | None:intergenic | 25.0% |
| ! | TTATCATTTGATTCAAACCA+TGG | + | chr8_1:39933860-39933879 | Msa1193500:CDS | 25.0% |
| ! | ATAAAATTTCAGCGAAACAT+CGG | + | chr8_1:39933936-39933955 | Msa1193500:CDS | 25.0% |
| ! | GATATACCTTGGTTATATTA+GGG | - | chr8_1:39934117-39934136 | None:intergenic | 25.0% |
| ! | AGATATACCTTGGTTATATT+AGG | - | chr8_1:39934118-39934137 | None:intergenic | 25.0% |
| !! | TATAACTTTTACCAAAATCG+TGG | - | chr8_1:39934244-39934263 | None:intergenic | 25.0% |
| ! | GTAAAGCTTCAACAAAATTA+CGG | + | chr8_1:39934266-39934285 | Msa1193500:intron | 25.0% |
| !! | AATATATAATGGAATTGCAG+AGG | + | chr8_1:39934397-39934416 | Msa1193500:CDS | 25.0% |
| !! | CTTAATCATGAAATCTTTTC+CGG | - | chr8_1:39934741-39934760 | None:intergenic | 25.0% |
| ! | ATTGAAGCAATAGATTCATT+TGG | + | chr8_1:39934800-39934819 | Msa1193500:CDS | 25.0% |
| !!! | AAAAGTTCTGAACATTCTTA+TGG | + | chr8_1:39934862-39934881 | Msa1193500:CDS | 25.0% |
| !!! | TAAAAAGTATGATTTGGTGT+GGG | - | chr8_1:39934967-39934986 | None:intergenic | 25.0% |
| !! | GGAATGTAAAAAGTATGATT+TGG | - | chr8_1:39934973-39934992 | None:intergenic | 25.0% |
| ! | GGTAAAAATTATCTGTTGTA+AGG | - | chr8_1:39935231-39935250 | None:intergenic | 25.0% |
| ! | ATTAAGGTAATGACTAATGA+GGG | - | chr8_1:39935252-39935271 | None:intergenic | 25.0% |
| ! | AATTAAGGTAATGACTAATG+AGG | - | chr8_1:39935253-39935272 | None:intergenic | 25.0% |
| !! | TGTATTCGATTTGAAGTATT+CGG | - | chr8_1:39935353-39935372 | None:intergenic | 25.0% |
| ! | AATGAGATTATTGTAGATAG+TGG | - | chr8_1:39935384-39935403 | None:intergenic | 25.0% |
| ! | AAAACTAGAGATTTCATTCA+TGG | + | chr8_1:39935462-39935481 | Msa1193500:intron | 25.0% |
| ! | TATCTCCATATTTAAAGACT+AGG | + | chr8_1:39935496-39935515 | Msa1193500:intron | 25.0% |
| !! | ATCAACCTAGTCTTTAAATA+TGG | - | chr8_1:39935504-39935523 | None:intergenic | 25.0% |
| !! | AAATACTCTCTGATTTTCTT+CGG | - | chr8_1:39935642-39935661 | None:intergenic | 25.0% |
| ! | ACAAAGCAATTATGAAGTTT+AGG | + | chr8_1:39935687-39935706 | Msa1193500:intron | 25.0% |
| ! | GTTATTATTTGTAAACTCGT+TGG | + | chr8_1:39935724-39935743 | Msa1193500:intron | 25.0% |
| ! | TTTGTAGCATAATCATTGTA+AGG | - | chr8_1:39935869-39935888 | None:intergenic | 25.0% |
| !! | TAGTTTTTATAGTGATATGG+TGG | - | chr8_1:39935992-39936011 | None:intergenic | 25.0% |
| !!! | GTTTCGTTTTTTAATACTAG+GGG | - | chr8_1:39936155-39936174 | None:intergenic | 25.0% |
| !!! | CGTTTCGTTTTTTAATACTA+GGG | - | chr8_1:39936156-39936175 | None:intergenic | 25.0% |
| !!! | TCGTTTCGTTTTTTAATACT+AGG | - | chr8_1:39936157-39936176 | None:intergenic | 25.0% |
| AATATGGAAATGATCCAACT+AGG | + | chr8_1:39932893-39932912 | Msa1193500:CDS | 30.0% | |
| TATGAAACATAGATACTCCT+CGG | + | chr8_1:39932957-39932976 | Msa1193500:intron | 30.0% | |
| TAACTTGAGAAAATGACATC+AGG | - | chr8_1:39932994-39933013 | None:intergenic | 30.0% | |
| ! | ATCCAATTTTTCTCTTGTGT+AGG | + | chr8_1:39933095-39933114 | Msa1193500:intron | 30.0% |
| AACCTACACAAGAGAAAAAT+TGG | - | chr8_1:39933100-39933119 | None:intergenic | 30.0% | |
| !! | GTTTTAATCCCTATTATTGG+CGG | + | chr8_1:39933565-39933584 | Msa1193500:CDS | 30.0% |
| TCACGGTATTTATATCTTCT+GGG | - | chr8_1:39933712-39933731 | None:intergenic | 30.0% | |
| TTCACGGTATTTATATCTTC+TGG | - | chr8_1:39933713-39933732 | None:intergenic | 30.0% | |
| TATAAAGCAAGAAGCCATAT+CGG | + | chr8_1:39933760-39933779 | Msa1193500:CDS | 30.0% | |
| GCTAAAATTGAAGTTCATGT+TGG | - | chr8_1:39933798-39933817 | None:intergenic | 30.0% | |
| !! | CATGAACTTCAATTTTAGCA+TGG | + | chr8_1:39933799-39933818 | Msa1193500:CDS | 30.0% |
| !! | AACTTCAATTTTAGCATGGA+AGG | + | chr8_1:39933803-39933822 | Msa1193500:CDS | 30.0% |
| ! | GGTTGATTCAAATATTCAAG+AGG | - | chr8_1:39933896-39933915 | None:intergenic | 30.0% |
| CTAAAAATCTTATCACAGAG+AGG | + | chr8_1:39934041-39934060 | Msa1193500:CDS | 30.0% | |
| !! | TATTGATTTGAACATGCACT+AGG | + | chr8_1:39934315-39934334 | Msa1193500:intron | 30.0% |
| ! | GTATCTAATCCTCTCAATTT+TGG | + | chr8_1:39934337-39934356 | Msa1193500:intron | 30.0% |
| GGATGCGATTGAATATATAA+TGG | + | chr8_1:39934386-39934405 | Msa1193500:CDS | 30.0% | |
| AGAGAAAGAATTTCAAGAAG+AGG | + | chr8_1:39934422-39934441 | Msa1193500:CDS | 30.0% | |
| AGACAAACTTTGATCAAGAT+CGG | - | chr8_1:39934547-39934566 | None:intergenic | 30.0% | |
| GATAATAGCAAACTAACTCA+TGG | - | chr8_1:39934931-39934950 | None:intergenic | 30.0% | |
| !! | GAGTTAGTTTGCTATTATCT+TGG | + | chr8_1:39934932-39934951 | Msa1193500:intron | 30.0% |
| !! | GTAAAAAGTATGATTTGGTG+TGG | - | chr8_1:39934968-39934987 | None:intergenic | 30.0% |
| AACATAGCCTAATCATTCTT+TGG | - | chr8_1:39935042-39935061 | None:intergenic | 30.0% | |
| AAGAATGATTAGGCTATGTT+TGG | + | chr8_1:39935042-39935061 | Msa1193500:intron | 30.0% | |
| ! | TGATCAAAATAGAGCTGTTT+TGG | + | chr8_1:39935116-39935135 | Msa1193500:intron | 30.0% |
| AGCTTAAATACTACTTGAAG+TGG | - | chr8_1:39935204-39935223 | None:intergenic | 30.0% | |
| GATAGAGAATCAATGAAACA+GGG | - | chr8_1:39935538-39935557 | None:intergenic | 30.0% | |
| AATCTTATGAACTTACGGAT+GGG | - | chr8_1:39935560-39935579 | None:intergenic | 30.0% | |
| TAACCTCGTTACAATAGAAA+GGG | - | chr8_1:39935585-39935604 | None:intergenic | 30.0% | |
| TTAACCTCGTTACAATAGAA+AGG | - | chr8_1:39935586-39935605 | None:intergenic | 30.0% | |
| ! | AATACTCTCTGATTTTCTTC+GGG | - | chr8_1:39935641-39935660 | None:intergenic | 30.0% |
| AGTATTTGATGCAGAAAACA+AGG | + | chr8_1:39935655-39935674 | Msa1193500:CDS | 30.0% | |
| TATGAAGTTTAGGAAAATGG+TGG | + | chr8_1:39935697-39935716 | Msa1193500:intron | 30.0% | |
| AGCAACTTCATAGAAAAAGT+TGG | + | chr8_1:39935782-39935801 | Msa1193500:intron | 30.0% | |
| GTCATAAACCCAAGAAAAAA+TGG | - | chr8_1:39935830-39935849 | None:intergenic | 30.0% | |
| !! | TGTCTTTTTGCAATTTTAGC+AGG | - | chr8_1:39935928-39935947 | None:intergenic | 30.0% |
| CACCAAATTCAAAAATGTTG+CGG | + | chr8_1:39935946-39935965 | Msa1193500:intron | 30.0% | |
| ! | TTCCGCAACATTTTTGAATT+TGG | - | chr8_1:39935951-39935970 | None:intergenic | 30.0% |
| ! | CGGAATTTAGAATCGAAAAT+AGG | + | chr8_1:39935966-39935985 | Msa1193500:intron | 30.0% |
| AAATCTTCTCAATCCAACAA+AGG | + | chr8_1:39936060-39936079 | Msa1193500:intron | 30.0% | |
| ! | TTTTTAATACTAGGGGATGA+TGG | - | chr8_1:39936148-39936167 | None:intergenic | 30.0% |
| ! | CTTGGGATTATGTTGTTGTT+TGG | + | chr8_1:39932869-39932888 | Msa1193500:CDS | 35.0% |
| GTGAAGTATAGACTCAAACA+CGG | - | chr8_1:39933060-39933079 | None:intergenic | 35.0% | |
| TGTTTGAGTCTATACTTCAC+AGG | + | chr8_1:39933060-39933079 | Msa1193500:intron | 35.0% | |
| TCTTGTGTAGGTTTATTGAG+TGG | + | chr8_1:39933107-39933126 | Msa1193500:intron | 35.0% | |
| TGTAGGTTTATTGAGTGGTT+AGG | + | chr8_1:39933112-39933131 | Msa1193500:intron | 35.0% | |
| ! | ATCATTTGGCTTCCATTTGT+AGG | + | chr8_1:39933197-39933216 | Msa1193500:CDS | 35.0% |
| ! | TCATTTGGCTTCCATTTGTA+GGG | + | chr8_1:39933198-39933217 | Msa1193500:CDS | 35.0% |
| !! | AAAAAGGGTATCCCTACAAA+TGG | - | chr8_1:39933212-39933231 | None:intergenic | 35.0% |
| AGTTAAAACCAAGACTTGTG+AGG | + | chr8_1:39933240-39933259 | Msa1193500:CDS | 35.0% | |
| AGACATTGTAAAAGGAAGCT+TGG | - | chr8_1:39933272-39933291 | None:intergenic | 35.0% | |
| ! | ATGTGCTGATATGAACTTCA+CGG | - | chr8_1:39933729-39933748 | None:intergenic | 35.0% |
| AATGATAAGTGCTCAGTTGA+AGG | - | chr8_1:39933848-39933867 | None:intergenic | 35.0% | |
| ! | CTGAAATTTTATTGCGTCTG+TGG | - | chr8_1:39933928-39933947 | None:intergenic | 35.0% |
| ATCTTATCACAGAGAGGAAT+AGG | + | chr8_1:39934047-39934066 | Msa1193500:CDS | 35.0% | |
| AGGAGGAACAGAATAAAACA+AGG | + | chr8_1:39934067-39934086 | Msa1193500:CDS | 35.0% | |
| GGAGGAACAGAATAAAACAA+GGG | + | chr8_1:39934068-39934087 | Msa1193500:CDS | 35.0% | |
| ! | AACAAGGGCTTTTTACACTA+AGG | + | chr8_1:39934083-39934102 | Msa1193500:CDS | 35.0% |
| TCTAGTCCCTAATATAACCA+AGG | + | chr8_1:39934108-39934127 | Msa1193500:CDS | 35.0% | |
| ! | AACTTTTACCAAAATCGTGG+TGG | - | chr8_1:39934241-39934260 | None:intergenic | 35.0% |
| AGAATTTCAAGAAGAGGTCA+AGG | + | chr8_1:39934428-39934447 | Msa1193500:CDS | 35.0% | |
| AAAGACAAAGAACTTGCAGA+AGG | + | chr8_1:39934501-39934520 | Msa1193500:CDS | 35.0% | |
| ! | CAGAACTTTTCCATCAAATG+TGG | - | chr8_1:39934852-39934871 | None:intergenic | 35.0% |
| TCTGAACATTCTTATGGTTG+AGG | + | chr8_1:39934868-39934887 | Msa1193500:CDS | 35.0% | |
| ACATTCTTATGGTTGAGGTA+AGG | + | chr8_1:39934873-39934892 | Msa1193500:intron | 35.0% | |
| CATTCTTATGGTTGAGGTAA+GGG | + | chr8_1:39934874-39934893 | Msa1193500:intron | 35.0% | |
| ! | AACTAACTCATGGATTTTCG+TGG | - | chr8_1:39934921-39934940 | None:intergenic | 35.0% |
| CTTCCTTCCAAAGAATGATT+AGG | + | chr8_1:39935032-39935051 | Msa1193500:intron | 35.0% | |
| TAGCCTAATCATTCTTTGGA+AGG | - | chr8_1:39935038-39935057 | None:intergenic | 35.0% | |
| ! | AGCTATTTGTTACAAGCTAG+CGG | - | chr8_1:39935077-39935096 | None:intergenic | 35.0% |
| GGATAGAGAATCAATGAAAC+AGG | - | chr8_1:39935539-39935558 | None:intergenic | 35.0% | |
| GAATCTTATGAACTTACGGA+TGG | - | chr8_1:39935561-39935580 | None:intergenic | 35.0% | |
| GGGAGAATCTTATGAACTTA+CGG | - | chr8_1:39935565-39935584 | None:intergenic | 35.0% | |
| ! | AAACTCGTTGGCTGAAAAAT+TGG | + | chr8_1:39935736-39935755 | Msa1193500:intron | 35.0% |
| CTTCATAGAAAAAGTTGGAC+TGG | + | chr8_1:39935787-39935806 | Msa1193500:intron | 35.0% | |
| GTAAGGAAATAGACGATTTC+TGG | - | chr8_1:39935852-39935871 | None:intergenic | 35.0% | |
| TAGAGATCTCTTACCTTTGT+TGG | - | chr8_1:39936076-39936095 | None:intergenic | 35.0% | |
| ! | ATCATAACACAGCATGCTTT+TGG | - | chr8_1:39936273-39936292 | None:intergenic | 35.0% |
| ATTTCACAGAATTCTCCTAC+CGG | - | chr8_1:39936313-39936332 | None:intergenic | 35.0% | |
| TTCTTAGACCCTTTGTTGAG+AGG | + | chr8_1:39932842-39932861 | Msa1193500:CDS | 40.0% | |
| CAAGCTTTCCTCTCAACAAA+GGG | - | chr8_1:39932853-39932872 | None:intergenic | 40.0% | |
| CTTTGTTGAGAGGAAAGCTT+GGG | + | chr8_1:39932852-39932871 | Msa1193500:CDS | 40.0% | |
| !!! | ATGGGTTTTGAGTACCTAGT+TGG | - | chr8_1:39932910-39932929 | None:intergenic | 40.0% |
| ! | TTGTGGTGGAAACATTGAGA+AGG | + | chr8_1:39933144-39933163 | Msa1193500:CDS | 40.0% |
| TGAGAAGGTGAAGTTGAAAG+AGG | + | chr8_1:39933159-39933178 | Msa1193500:CDS | 40.0% | |
| CAATATCACAGCAACCAAGA+TGG | + | chr8_1:39933417-39933436 | Msa1193500:CDS | 40.0% | |
| !!! | ATGTTTTGACAGGACTCAGT+TGG | + | chr8_1:39933535-39933554 | Msa1193500:intron | 40.0% |
| CAACAAGACCGCCAATAATA+GGG | - | chr8_1:39933576-39933595 | None:intergenic | 40.0% | |
| TCAACAAGACCGCCAATAAT+AGG | - | chr8_1:39933577-39933596 | None:intergenic | 40.0% | |
| GCATGATACACTTTCTCTTG+AGG | - | chr8_1:39934022-39934041 | None:intergenic | 40.0% | |
| TTATCACAGAGAGGAATAGG+AGG | + | chr8_1:39934050-39934069 | Msa1193500:CDS | 40.0% | |
| ! | TTTTTGCACAAGTGCCTGTT+TGG | + | chr8_1:39934184-39934203 | Msa1193500:intron | 40.0% |
| GTGGTGGTCAAATGTAATTC+TGG | - | chr8_1:39934225-39934244 | None:intergenic | 40.0% | |
| ! | ACATTTGACCACCACGATTT+TGG | + | chr8_1:39934230-39934249 | Msa1193500:intron | 40.0% |
| !! | ATCCTCTCAATTTTGGCAGA+TGG | + | chr8_1:39934344-39934363 | Msa1193500:intron | 40.0% |
| TTCCACTAGAAAGACACGAA+TGG | + | chr8_1:39934569-39934588 | Msa1193500:CDS | 40.0% | |
| GTAGAAGTGAATCATATCGC+CGG | + | chr8_1:39934719-39934738 | Msa1193500:CDS | 40.0% | |
| GCAAACATGACCACATTTGA+TGG | + | chr8_1:39934839-39934858 | Msa1193500:CDS | 40.0% | |
| ! | CTTTGGAAGGAAGTTACAAG+TGG | - | chr8_1:39935025-39935044 | None:intergenic | 40.0% |
| ! | GCTATTTGTTACAAGCTAGC+GGG | - | chr8_1:39935076-39935095 | None:intergenic | 40.0% |
| AAATTGTCTACGGCTCTGTT+TGG | - | chr8_1:39935439-39935458 | None:intergenic | 40.0% | |
| TCTCCCTTTCTATTGTAACG+AGG | + | chr8_1:39935579-39935598 | Msa1193500:intron | 40.0% | |
| ! | ACAAAGAGGCACATTCAAGT+TGG | - | chr8_1:39936344-39936363 | None:intergenic | 40.0% |
| CCAAGCTTTCCTCTCAACAA+AGG | - | chr8_1:39932854-39932873 | None:intergenic | 45.0% | |
| CCTTTGTTGAGAGGAAAGCT+TGG | + | chr8_1:39932851-39932870 | Msa1193500:CDS | 45.0% | |
| ! | TGGTTAGGTTGTTGCTGTTG+TGG | + | chr8_1:39933127-39933146 | Msa1193500:CDS | 45.0% |
| ! | TTAGGTTGTTGCTGTTGTGG+TGG | + | chr8_1:39933130-39933149 | Msa1193500:CDS | 45.0% |
| GATCTACAGTATCCATGCAG+AGG | + | chr8_1:39933391-39933410 | Msa1193500:intron | 45.0% | |
| GTGATATTGCTACCTCTGCA+TGG | - | chr8_1:39933406-39933425 | None:intergenic | 45.0% | |
| ACCAAGATGGCTTATCCATG+AGG | + | chr8_1:39933430-39933449 | Msa1193500:CDS | 45.0% | |
| ACCTCATGGATAAGCCATCT+TGG | - | chr8_1:39933434-39933453 | None:intergenic | 45.0% | |
| CAAGAGGAATCAAGCATCCA+TGG | - | chr8_1:39933880-39933899 | None:intergenic | 45.0% | |
| ! | TTGCGTCTGTGGCTTTTAAG+TGG | - | chr8_1:39933917-39933936 | None:intergenic | 45.0% |
| !! | TGTAGTTCGAGTGTCGATTG+TGG | + | chr8_1:39933959-39933978 | Msa1193500:CDS | 45.0% |
| !! | TCGAGTGTCGATTGTGGAAA+TGG | + | chr8_1:39933965-39933984 | Msa1193500:CDS | 45.0% |
| ACAAGTGCCTGTTTGGTTGA+CGG | + | chr8_1:39934191-39934210 | Msa1193500:intron | 45.0% | |
| AAACTCACCGTCAACCAAAC+AGG | - | chr8_1:39934201-39934220 | None:intergenic | 45.0% | |
| GTCCATCTGCCAAAATTGAG+AGG | - | chr8_1:39934349-39934368 | None:intergenic | 45.0% | |
| GGACAGAGTAGCAATTCTTG+AGG | + | chr8_1:39934365-39934384 | Msa1193500:CDS | 45.0% | |
| !! | GGTCAAGGCTTTAGAAGTTG+AGG | + | chr8_1:39934443-39934462 | Msa1193500:CDS | 45.0% |
| ! | CTTTAGAAGTTGAGGACCGT+GGG | + | chr8_1:39934451-39934470 | Msa1193500:CDS | 45.0% |
| TTTGTAGTGTGCTCTTCCCA+CGG | - | chr8_1:39934470-39934489 | None:intergenic | 45.0% | |
| CTTTGATCAAGATCGGTGAG+AGG | - | chr8_1:39934540-39934559 | None:intergenic | 45.0% | |
| CTCCATTCGTGTCTTTCTAG+TGG | - | chr8_1:39934574-39934593 | None:intergenic | 45.0% | |
| CACTAGAAAGACACGAATGG+AGG | + | chr8_1:39934572-39934591 | Msa1193500:CDS | 45.0% | |
| ! | AGAAGCAAGGCGTGTTTTCA+AGG | + | chr8_1:39934774-39934793 | Msa1193500:CDS | 45.0% |
| ! | ACGAGGTTAAATTTTGCCCC+AGG | + | chr8_1:39935596-39935615 | Msa1193500:intron | 45.0% |
| TGTTATGATCCCGCAGTTCA+AGG | + | chr8_1:39936284-39936303 | Msa1193500:intron | 45.0% | |
| !! | TAATTAATAAAATTCAATTA+AGG | - | chr8_1:39935268-39935287 | None:intergenic | 5.0% |
| ATCAGGACACGTCTAATCCG+AGG | - | chr8_1:39932977-39932996 | None:intergenic | 50.0% | |
| ACTAGACACGACACGGAACA+TGG | - | chr8_1:39933035-39933054 | None:intergenic | 50.0% | |
| !! | GCTTTAGAAGTTGAGGACCG+TGG | + | chr8_1:39934450-39934469 | Msa1193500:CDS | 50.0% |
| ATCGGTGAGAGGTAGGTTTC+TGG | - | chr8_1:39934529-39934548 | None:intergenic | 50.0% | |
| GATCAAGATCGGTGAGAGGT+AGG | - | chr8_1:39934536-39934555 | None:intergenic | 50.0% | |
| TTGTGCTGTGAGCAGAAGCA+AGG | + | chr8_1:39934761-39934780 | Msa1193500:CDS | 50.0% | |
| AATATCCTGCGCAGTTGCCT+GGG | - | chr8_1:39935616-39935635 | None:intergenic | 50.0% | |
| TCACAGAATTCTCCTACCGG+AGG | - | chr8_1:39936310-39936329 | None:intergenic | 50.0% | |
| CACGGACACTAGACACGACA+CGG | - | chr8_1:39933042-39933061 | None:intergenic | 55.0% | |
| GGCAAGAGCCTCACAAGTCT+TGG | - | chr8_1:39933251-39933270 | None:intergenic | 55.0% | |
| ! | GGCGTAGCTATGTGCCGATA+TGG | - | chr8_1:39933777-39933796 | None:intergenic | 55.0% |
| ATATCCTGCGCAGTTGCCTG+GGG | - | chr8_1:39935615-39935634 | None:intergenic | 55.0% | |
| GAATATCCTGCGCAGTTGCC+TGG | - | chr8_1:39935617-39935636 | None:intergenic | 55.0% | |
| ATCCCGCAGTTCAAGGCCTC+CGG | + | chr8_1:39936291-39936310 | Msa1193500:intron | 60.0% | |
| TACCGGAGGCCTTGAACTGC+GGG | - | chr8_1:39936296-39936315 | None:intergenic | 60.0% | |
| CTACCGGAGGCCTTGAACTG+CGG | - | chr8_1:39936297-39936316 | None:intergenic | 60.0% | |
| TTTGCCCCAGGCAACTGCGC+AGG | + | chr8_1:39935608-39935627 | Msa1193500:intron | 65.0% | |
| CGCAGTTCAAGGCCTCCGGT+AGG | + | chr8_1:39936295-39936314 | Msa1193500:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 39932826 | 39936366 | 39932826 | ID=Msa1193500;Name=Msa1193500 |
| chr8_1 | mRNA | 39932826 | 39936366 | 39932826 | ID=Msa1193500-mRNA-1;Parent=Msa1193500;Name=Msa1193500-mRNA-1;_AED=0.06;_eAED=0.08;_QI=0|0|0|0.77|1|1|9|0|450 |
| chr8_1 | exon | 39932826 | 39932914 | 39932826 | ID=Msa1193500-mRNA-1:exon:13021;Parent=Msa1193500-mRNA-1 |
| chr8_1 | exon | 39933117 | 39933302 | 39933117 | ID=Msa1193500-mRNA-1:exon:13022;Parent=Msa1193500-mRNA-1 |
| chr8_1 | exon | 39933400 | 39933451 | 39933400 | ID=Msa1193500-mRNA-1:exon:13023;Parent=Msa1193500-mRNA-1 |
| chr8_1 | exon | 39933547 | 39933615 | 39933547 | ID=Msa1193500-mRNA-1:exon:13024;Parent=Msa1193500-mRNA-1 |
| chr8_1 | exon | 39933707 | 39934129 | 39933707 | ID=Msa1193500-mRNA-1:exon:13025;Parent=Msa1193500-mRNA-1 |
| chr8_1 | exon | 39934363 | 39934593 | 39934363 | ID=Msa1193500-mRNA-1:exon:13026;Parent=Msa1193500-mRNA-1 |
| chr8_1 | exon | 39934713 | 39934889 | 39934713 | ID=Msa1193500-mRNA-1:exon:13027;Parent=Msa1193500-mRNA-1 |
| chr8_1 | exon | 39935618 | 39935676 | 39935618 | ID=Msa1193500-mRNA-1:exon:13028;Parent=Msa1193500-mRNA-1 |
| chr8_1 | exon | 39936300 | 39936366 | 39936300 | ID=Msa1193500-mRNA-1:exon:13029;Parent=Msa1193500-mRNA-1 |
| chr8_1 | CDS | 39932826 | 39932914 | 39932826 | ID=Msa1193500-mRNA-1:cds;Parent=Msa1193500-mRNA-1 |
| chr8_1 | CDS | 39933117 | 39933302 | 39933117 | ID=Msa1193500-mRNA-1:cds;Parent=Msa1193500-mRNA-1 |
| chr8_1 | CDS | 39933400 | 39933451 | 39933400 | ID=Msa1193500-mRNA-1:cds;Parent=Msa1193500-mRNA-1 |
| chr8_1 | CDS | 39933547 | 39933615 | 39933547 | ID=Msa1193500-mRNA-1:cds;Parent=Msa1193500-mRNA-1 |
| chr8_1 | CDS | 39933707 | 39934129 | 39933707 | ID=Msa1193500-mRNA-1:cds;Parent=Msa1193500-mRNA-1 |
| chr8_1 | CDS | 39934363 | 39934593 | 39934363 | ID=Msa1193500-mRNA-1:cds;Parent=Msa1193500-mRNA-1 |
| chr8_1 | CDS | 39934713 | 39934889 | 39934713 | ID=Msa1193500-mRNA-1:cds;Parent=Msa1193500-mRNA-1 |
| chr8_1 | CDS | 39935618 | 39935676 | 39935618 | ID=Msa1193500-mRNA-1:cds;Parent=Msa1193500-mRNA-1 |
| chr8_1 | CDS | 39936300 | 39936366 | 39936300 | ID=Msa1193500-mRNA-1:cds;Parent=Msa1193500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
