Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1195210 | sp|O48686|SNL3_ARATH | 39.196 | 199 | 84 | 2 | 1 | 199 | 1 | 162 | 2.76e-35 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1195210 | G7LEM6 | 91.626 | 203 | 15 | 2 | 1 | 201 | 1 | 203 | 7.64e-130 | 372 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1195210 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1195210 | MtrunA17_Chr8g0364021 | 76.923 | 182 | 32 | 4 | 1 | 172 | 31 | 212 | 2.09e-90 | 265 |
| Msa1195210 | MtrunA17_Chr5g0415031 | 39.286 | 196 | 82 | 2 | 4 | 199 | 33 | 191 | 6.86e-38 | 139 |
| Msa1195210 | MtrunA17_Chr6g0452001 | 41.206 | 199 | 75 | 4 | 2 | 199 | 54 | 211 | 1.29e-37 | 138 |
| Msa1195210 | MtrunA17_Chr8g0364231 | 38.660 | 194 | 82 | 2 | 6 | 199 | 34 | 190 | 4.79e-35 | 130 |
| Msa1195210 | MtrunA17_Chr6g0452021 | 38.021 | 192 | 80 | 2 | 8 | 199 | 37 | 189 | 6.23e-34 | 125 |
| Msa1195210 | MtrunA17_Chr1g0206781 | 47.191 | 89 | 46 | 1 | 8 | 96 | 5 | 92 | 1.07e-19 | 80.5 |
| Msa1195210 | MtrunA17_Chr1g0206771 | 51.389 | 72 | 35 | 0 | 7 | 78 | 9 | 80 | 4.67e-18 | 78.2 |
| Msa1195210 | MtrunA17_Chr1g0206771 | 48.571 | 70 | 36 | 0 | 13 | 82 | 94 | 163 | 2.08e-12 | 62.8 |
| Msa1195210 | MtrunA17_Chr3g0077881 | 43.119 | 109 | 55 | 3 | 8 | 109 | 2 | 110 | 3.96e-17 | 75.5 |
| Msa1195210 | MtrunA17_Chr3g0077881 | 43.529 | 85 | 46 | 2 | 5 | 87 | 90 | 174 | 3.55e-12 | 62.4 |
| Msa1195210 | MtrunA17_Chr3g0077891 | 49.383 | 81 | 40 | 1 | 5 | 84 | 90 | 170 | 5.96e-17 | 75.1 |
| Msa1195210 | MtrunA17_Chr3g0077891 | 41.284 | 109 | 57 | 2 | 8 | 109 | 2 | 110 | 1.45e-15 | 71.2 |
| Msa1195210 | MtrunA17_Chr3g0077941 | 33.503 | 197 | 89 | 6 | 8 | 199 | 2 | 161 | 9.49e-16 | 71.6 |
| Msa1195210 | MtrunA17_Chr3g0077941 | 45.556 | 90 | 41 | 2 | 7 | 95 | 91 | 173 | 2.05e-15 | 70.9 |
| Msa1195210 | MtrunA17_Chr3g0077911 | 50.000 | 74 | 36 | 1 | 7 | 79 | 83 | 156 | 1.01e-15 | 71.2 |
| Msa1195210 | MtrunA17_Chr3g0077911 | 31.633 | 196 | 86 | 7 | 8 | 199 | 2 | 153 | 5.57e-12 | 61.2 |
| Msa1195210 | MtrunA17_Chr1g0205811 | 41.573 | 89 | 52 | 0 | 1 | 89 | 1 | 89 | 3.03e-15 | 68.9 |
| Msa1195210 | MtrunA17_Chr1g0205821 | 38.636 | 88 | 54 | 0 | 5 | 92 | 90 | 177 | 3.27e-15 | 70.5 |
| Msa1195210 | MtrunA17_Chr1g0205821 | 38.372 | 86 | 53 | 0 | 13 | 98 | 12 | 97 | 3.64e-12 | 62.4 |
| Msa1195210 | MtrunA17_Chr3g0077861 | 48.649 | 74 | 37 | 1 | 7 | 79 | 83 | 156 | 5.38e-15 | 69.7 |
| Msa1195210 | MtrunA17_Chr3g0077861 | 41.573 | 89 | 48 | 2 | 8 | 95 | 2 | 87 | 3.80e-11 | 59.3 |
| Msa1195210 | MtrunA17_Chr1g0205861 | 36.364 | 110 | 67 | 2 | 6 | 113 | 8 | 116 | 1.01e-13 | 65.1 |
| Msa1195210 | MtrunA17_Chr4g0075861 | 43.373 | 83 | 45 | 1 | 9 | 89 | 84 | 166 | 2.13e-13 | 67.8 |
| Msa1195210 | MtrunA17_Chr4g0075861 | 45.455 | 77 | 40 | 1 | 7 | 83 | 167 | 241 | 1.00e-11 | 62.8 |
| Msa1195210 | MtrunA17_Chr4g0075861 | 45.000 | 80 | 41 | 1 | 13 | 92 | 11 | 87 | 1.36e-11 | 62.4 |
| Msa1195210 | MtrunA17_Chr7g0218911 | 36.842 | 76 | 42 | 1 | 18 | 93 | 2 | 71 | 1.39e-12 | 62.0 |
| Msa1195210 | MtrunA17_Chr4g0075971 | 40.964 | 83 | 47 | 1 | 9 | 89 | 84 | 166 | 1.07e-11 | 63.2 |
| Msa1195210 | MtrunA17_Chr4g0075971 | 28.272 | 191 | 83 | 4 | 13 | 199 | 11 | 151 | 1.74e-11 | 62.4 |
| Msa1195210 | MtrunA17_Chr2g0328701 | 42.500 | 80 | 43 | 1 | 13 | 92 | 28 | 104 | 1.46e-11 | 59.3 |
| Msa1195210 | MtrunA17_Chr1g0205801 | 38.158 | 76 | 47 | 0 | 14 | 89 | 12 | 87 | 8.71e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1195210 | AT1G24190.3 | 39.691 | 194 | 80 | 2 | 6 | 199 | 6 | 162 | 1.97e-36 | 135 |
| Msa1195210 | AT1G24190.1 | 39.196 | 199 | 84 | 2 | 1 | 199 | 1 | 162 | 2.81e-36 | 134 |
| Msa1195210 | AT1G24190.2 | 39.196 | 199 | 84 | 2 | 1 | 199 | 1 | 162 | 2.86e-36 | 134 |
| Msa1195210 | AT1G70060.2 | 38.191 | 199 | 87 | 2 | 1 | 199 | 1 | 163 | 1.49e-35 | 132 |
| Msa1195210 | AT1G70060.1 | 38.191 | 199 | 87 | 2 | 1 | 199 | 1 | 163 | 1.49e-35 | 132 |
| Msa1195210 | AT3G01320.2 | 37.629 | 194 | 83 | 1 | 7 | 200 | 50 | 205 | 2.39e-35 | 132 |
| Msa1195210 | AT3G01320.1 | 37.629 | 194 | 83 | 1 | 7 | 200 | 50 | 205 | 2.61e-35 | 132 |
| Msa1195210 | AT5G15020.2 | 36.979 | 192 | 82 | 3 | 8 | 199 | 46 | 198 | 6.37e-32 | 122 |
| Msa1195210 | AT5G15020.1 | 36.979 | 192 | 82 | 3 | 8 | 199 | 46 | 198 | 7.51e-32 | 122 |
| Msa1195210 | AT1G59890.3 | 36.559 | 186 | 79 | 2 | 14 | 199 | 45 | 191 | 2.46e-31 | 120 |
| Msa1195210 | AT1G59890.1 | 36.559 | 186 | 79 | 2 | 14 | 199 | 45 | 191 | 2.50e-31 | 120 |
| Msa1195210 | AT1G59890.2 | 36.559 | 186 | 79 | 2 | 14 | 199 | 45 | 191 | 2.60e-31 | 120 |
| Msa1195210 | AT1G59890.4 | 36.559 | 186 | 79 | 2 | 14 | 199 | 45 | 191 | 2.78e-31 | 120 |
| Msa1195210 | AT1G70030.1 | 33.505 | 194 | 90 | 2 | 6 | 199 | 3 | 157 | 1.71e-28 | 105 |
| Msa1195210 | AT1G10450.3 | 34.574 | 188 | 84 | 1 | 14 | 201 | 84 | 232 | 2.32e-28 | 112 |
| Msa1195210 | AT1G10450.2 | 34.574 | 188 | 84 | 1 | 14 | 201 | 33 | 181 | 2.82e-28 | 111 |
| Msa1195210 | AT1G10450.1 | 34.574 | 188 | 84 | 1 | 14 | 201 | 33 | 181 | 2.82e-28 | 111 |
| Msa1195210 | AT1G24200.1 | 34.826 | 201 | 91 | 3 | 1 | 201 | 1 | 161 | 1.93e-26 | 100 |
| Msa1195210 | AT5G15025.1 | 51.899 | 79 | 38 | 0 | 10 | 88 | 43 | 121 | 7.04e-21 | 84.3 |
| Msa1195210 | AT1G70030.3 | 43.529 | 85 | 48 | 0 | 3 | 87 | 11 | 95 | 3.16e-18 | 77.4 |
| Msa1195210 | AT1G70030.2 | 43.529 | 85 | 48 | 0 | 3 | 87 | 11 | 95 | 4.24e-18 | 77.4 |
| Msa1195210 | AT1G27260.1 | 31.163 | 215 | 111 | 6 | 15 | 195 | 4 | 215 | 8.70e-18 | 78.6 |
| Msa1195210 | AT5G15040.1 | 45.946 | 74 | 40 | 0 | 17 | 90 | 6 | 79 | 8.10e-17 | 72.4 |
| Msa1195210 | AT5G15040.3 | 45.946 | 74 | 40 | 0 | 17 | 90 | 6 | 79 | 8.10e-17 | 72.4 |
| Msa1195210 | AT5G15040.2 | 45.946 | 74 | 40 | 0 | 17 | 90 | 6 | 79 | 8.10e-17 | 72.4 |
| Msa1195210 | AT1G27220.1 | 44.444 | 81 | 44 | 1 | 3 | 82 | 2 | 82 | 1.87e-16 | 74.3 |
| Msa1195210 | AT4G12020.11 | 44.944 | 89 | 48 | 1 | 10 | 98 | 304 | 391 | 3.02e-16 | 77.0 |
| Msa1195210 | AT4G12020.5 | 44.944 | 89 | 48 | 1 | 10 | 98 | 237 | 324 | 1.58e-15 | 74.7 |
| Msa1195210 | AT4G12020.7 | 44.944 | 89 | 48 | 1 | 10 | 98 | 304 | 391 | 1.63e-15 | 74.7 |
| Msa1195210 | AT4G12020.1 | 44.944 | 89 | 48 | 1 | 10 | 98 | 304 | 391 | 1.63e-15 | 74.7 |
| Msa1195210 | AT4G12020.9 | 44.944 | 89 | 48 | 1 | 10 | 98 | 304 | 391 | 1.63e-15 | 74.7 |
| Msa1195210 | AT4G12020.6 | 44.944 | 89 | 48 | 1 | 10 | 98 | 304 | 391 | 1.64e-15 | 74.7 |
| Msa1195210 | AT4G12020.8 | 44.944 | 89 | 48 | 1 | 10 | 98 | 304 | 391 | 1.64e-15 | 74.7 |
| Msa1195210 | AT4G12020.10 | 44.944 | 89 | 48 | 1 | 10 | 98 | 304 | 391 | 1.70e-15 | 74.7 |
| Msa1195210 | AT4G12020.3 | 44.944 | 89 | 48 | 1 | 10 | 98 | 304 | 391 | 1.71e-15 | 74.7 |
| Msa1195210 | AT4G12020.4 | 44.944 | 89 | 48 | 1 | 10 | 98 | 304 | 391 | 1.75e-15 | 74.7 |
| Msa1195210 | AT4G12020.2 | 44.944 | 89 | 48 | 1 | 10 | 98 | 304 | 391 | 1.80e-15 | 74.7 |
| Msa1195210 | AT1G27250.1 | 41.250 | 80 | 46 | 1 | 3 | 81 | 9 | 88 | 3.56e-15 | 69.7 |
| Msa1195210 | AT5G35610.1 | 31.429 | 175 | 90 | 4 | 6 | 180 | 2 | 146 | 6.43e-14 | 66.6 |
| Msa1195210 | AT1G24210.1 | 26.316 | 190 | 81 | 3 | 10 | 198 | 10 | 141 | 6.49e-14 | 66.6 |
| Msa1195210 | AT1G23810.1 | 42.188 | 64 | 37 | 0 | 11 | 74 | 106 | 169 | 6.71e-11 | 60.1 |
Find 39 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCATCTTCTTCTGAAAT+TGG | 0.145375 | 8_1:+43030237 | None:intergenic |
| TCTTTAGGCTGCTGCACTTT+TGG | 0.231309 | 8_1:-43026482 | Msa1195210:intron |
| GTTCATCTTCTTCTGAAATT+GGG | 0.296314 | 8_1:+43030238 | None:intergenic |
| TCACATTCATCAAGATTCCT+AGG | 0.400109 | 8_1:+43030210 | None:intergenic |
| TGATGCCTTTGCATATCTTA+AGG | 0.401654 | 8_1:-43030709 | Msa1195210:CDS |
| GAGGTGAAGGAGTTGTTTAA+AGG | 0.403782 | 8_1:-43030315 | Msa1195210:CDS |
| ACAAACTCATTAGCATGTTC+AGG | 0.410073 | 8_1:+43030078 | None:intergenic |
| TGAAGGATTACAAAGATAAC+AGG | 0.410405 | 8_1:-43030629 | Msa1195210:intron |
| AGGACATAATGATCTGATTA+CGG | 0.410966 | 8_1:-43030295 | Msa1195210:CDS |
| CCAAATGGTTCATTCCTTGA+TGG | 0.420352 | 8_1:+43030105 | None:intergenic |
| TCATGAACATGCTGATAGAT+AGG | 0.425133 | 8_1:-43026665 | Msa1195210:CDS |
| AACATGCTAATGAGTTTGTC+AGG | 0.450168 | 8_1:-43030074 | Msa1195210:CDS |
| GGACATAATGATCTGATTAC+GGG | 0.453739 | 8_1:-43030294 | Msa1195210:CDS |
| CACATTCATCAAGATTCCTA+GGG | 0.482045 | 8_1:+43030211 | None:intergenic |
| CCATCAAGGAATGAACCATT+TGG | 0.482429 | 8_1:-43030105 | Msa1195210:CDS |
| CAATCTCCTCAGATGATGCT+TGG | 0.483286 | 8_1:-43030147 | Msa1195210:CDS |
| TGAGTTTGTCAGGAAAGTTA+AGG | 0.495626 | 8_1:-43030064 | Msa1195210:intron |
| GCATGTTCAGGTCCACCAAA+TGG | 0.497913 | 8_1:+43030090 | None:intergenic |
| ATATGCAAAGGCATCATCTT+CGG | 0.504699 | 8_1:+43030716 | None:intergenic |
| TTTCCGCAGACTCGGTATGA+AGG | 0.534877 | 8_1:-43026720 | Msa1195210:intron |
| TGCATATCTTAAGGCAGTCA+AGG | 0.563220 | 8_1:-43030700 | Msa1195210:CDS |
| AGCATATCACAACTCCATCA+AGG | 0.566686 | 8_1:-43030119 | Msa1195210:CDS |
| ATGTGAAATGACAATTCCAT+TGG | 0.573688 | 8_1:-43030193 | Msa1195210:CDS |
| TCAAGGAATGAACCATTTGG+TGG | 0.574249 | 8_1:-43030102 | Msa1195210:CDS |
| TTACATAGAGACTTACTATG+AGG | 0.579989 | 8_1:-43026634 | Msa1195210:intron |
| TGAGGAGATTGTGCATTGAG+AGG | 0.583914 | 8_1:+43030159 | None:intergenic |
| TAATTACCATGACGTTGTAA+CGG | 0.588102 | 8_1:-43030337 | Msa1195210:CDS |
| TTCAACATCTTTGCACCAAG+TGG | 0.595995 | 8_1:-43030270 | Msa1195210:CDS |
| TGACGTTGTAACGGAGGTGA+AGG | 0.598498 | 8_1:-43030328 | Msa1195210:CDS |
| ACTTCCACTTCTTAAACACC+AGG | 0.607178 | 8_1:+43026418 | None:intergenic |
| ACAAAGATGAGTACGAGTCA+AGG | 0.614659 | 8_1:-43030753 | None:intergenic |
| GACTGCCTTAAGATATGCAA+AGG | 0.619589 | 8_1:+43030704 | None:intergenic |
| TCACCTCCGTTACAACGTCA+TGG | 0.624638 | 8_1:+43030331 | None:intergenic |
| ATTGGGATTTGATAACCACT+TGG | 0.631213 | 8_1:+43030255 | None:intergenic |
| TTACCATGACGTTGTAACGG+AGG | 0.671678 | 8_1:-43030334 | Msa1195210:CDS |
| TCTTCTCCAAGCATCATCTG+AGG | 0.679479 | 8_1:+43030141 | None:intergenic |
| ACATTCATCAAGATTCCTAG+GGG | 0.685325 | 8_1:+43030212 | None:intergenic |
| CATTCATCAAGATTCCTAGG+GGG | 0.699372 | 8_1:+43030213 | None:intergenic |
| AAGATGAGTACGAGTCAAGG+TGG | 0.711763 | 8_1:-43030750 | Msa1195210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGGTAAATTATAAATAATAT+AGG | + | chr8_1:43026749-43026768 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTCTTTTTAGT+TGG | + | chr8_1:43027801-43027820 | None:intergenic | 10.0% |
| !! | TAGCTAAATATTTATTATTT+GGG | - | chr8_1:43028433-43028452 | Msa1195210:intron | 10.0% |
| !!! | TCAAGAATAATATTTTTTTT+GGG | - | chr8_1:43028486-43028505 | Msa1195210:intron | 10.0% |
| !!! | TAATTAATAGGAAAATTTTA+TGG | + | chr8_1:43030257-43030276 | None:intergenic | 10.0% |
| !!! | TTATTTCTTATTTTTTAATC+CGG | - | chr8_1:43030335-43030354 | Msa1195210:CDS | 10.0% |
| !!! | AATATAATTTTTTAATCATG+TGG | - | chr8_1:43030636-43030655 | Msa1195210:CDS | 10.0% |
| ! | CGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028577-43028596 | Msa1195210:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028578-43028597 | Msa1195210:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028578-43028597 | Msa1195210:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028578-43028597 | Msa1195210:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028578-43028597 | Msa1195210:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028578-43028597 | Msa1195210:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028578-43028597 | Msa1195210:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028578-43028597 | Msa1195210:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028578-43028597 | Msa1195210:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028578-43028597 | Msa1195210:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028578-43028597 | Msa1195210:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028578-43028597 | Msa1195210:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028578-43028597 | Msa1195210:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028578-43028597 | Msa1195210:intron | 100.0% |
| !!! | TTACTTTTTGAAAATAATGA+AGG | - | chr8_1:43026530-43026549 | Msa1195210:intron | 15.0% |
| !! | AATAGAAAAATGTAAATTAC+CGG | + | chr8_1:43026716-43026735 | None:intergenic | 15.0% |
| !!! | TATTTATTTTGTTGATTTCT+AGG | - | chr8_1:43026814-43026833 | Msa1195210:intron | 15.0% |
| !! | ACTTAAAGTAGATATATTAT+AGG | - | chr8_1:43027357-43027376 | Msa1195210:intron | 15.0% |
| !! | AAATCAACCTATTAAATTTA+AGG | - | chr8_1:43027829-43027848 | Msa1195210:intron | 15.0% |
| !! | ACTTTATCCTTAAATTTAAT+AGG | + | chr8_1:43027839-43027858 | None:intergenic | 15.0% |
| !!! | AAATTGAATATTTTTTCTCA+AGG | + | chr8_1:43027902-43027921 | None:intergenic | 15.0% |
| !! | TAGTCATAAACATATTAAAT+GGG | + | chr8_1:43028266-43028285 | None:intergenic | 15.0% |
| !! | ATAGTCATAAACATATTAAA+TGG | + | chr8_1:43028267-43028286 | None:intergenic | 15.0% |
| !! | GTAGCTAAATATTTATTATT+TGG | - | chr8_1:43028432-43028451 | Msa1195210:intron | 15.0% |
| !! | AAAAAATATTATTCTTGAGT+TGG | + | chr8_1:43028484-43028503 | None:intergenic | 15.0% |
| !!! | CTCAAGAATAATATTTTTTT+TGG | - | chr8_1:43028485-43028504 | Msa1195210:intron | 15.0% |
| !!! | CAAGAATAATATTTTTTTTG+GGG | - | chr8_1:43028487-43028506 | Msa1195210:intron | 15.0% |
| !! | AAACTTAACATACAATAAAA+CGG | - | chr8_1:43028557-43028576 | Msa1195210:intron | 15.0% |
| !! | TAAAAAAATTATTCTACATG+CGG | - | chr8_1:43028667-43028686 | Msa1195210:intron | 15.0% |
| !! | TTTATACAATGATAACAAAA+AGG | + | chr8_1:43029155-43029174 | None:intergenic | 15.0% |
| !! | ACTATTACATTGTAAATTTA+TGG | - | chr8_1:43029663-43029682 | Msa1195210:intron | 15.0% |
| !! | CTATTACATTGTAAATTTAT+GGG | - | chr8_1:43029664-43029683 | Msa1195210:intron | 15.0% |
| !! | TATTACATTGTAAATTTATG+GGG | - | chr8_1:43029665-43029684 | Msa1195210:intron | 15.0% |
| !! | AATTAGAGACGAAAAAAATT+TGG | + | chr8_1:43026689-43026708 | None:intergenic | 20.0% |
| !!! | AAAAGTATAAACTCTAACTA+AGG | + | chr8_1:43027165-43027184 | None:intergenic | 20.0% |
| !! | TTCTTTATTAGAAAGAACAA+AGG | + | chr8_1:43027293-43027312 | None:intergenic | 20.0% |
| !! | GATATATTATAGGTTTGAAA+AGG | - | chr8_1:43027367-43027386 | Msa1195210:intron | 20.0% |
| !!! | AAGATCAAGATCTTATTTAT+TGG | - | chr8_1:43027420-43027439 | Msa1195210:intron | 20.0% |
| !!! | AGATCAAGATCTTATTTATT+GGG | - | chr8_1:43027421-43027440 | Msa1195210:intron | 20.0% |
| !! | TTACTATTATAGTACTCTAT+TGG | + | chr8_1:43027518-43027537 | None:intergenic | 20.0% |
| !!! | AAAAAAAGTGTTTTTAGTCT+TGG | - | chr8_1:43027950-43027969 | Msa1195210:intron | 20.0% |
| !!! | TCCTAAATTTTTTTGTTGTA+GGG | + | chr8_1:43027983-43028002 | None:intergenic | 20.0% |
| !!! | CTAAGTTAATTTTCATGTAT+TGG | + | chr8_1:43028089-43028108 | None:intergenic | 20.0% |
| !! | CATCAACAAATGATAAAAAT+TGG | - | chr8_1:43028111-43028130 | Msa1195210:intron | 20.0% |
| !!! | GGAAAATACATTATCTATTT+TGG | + | chr8_1:43028206-43028225 | None:intergenic | 20.0% |
| !!! | AATAATATTTTTTTTGGGGT+AGG | - | chr8_1:43028491-43028510 | Msa1195210:intron | 20.0% |
| !! | AACTTAACATACAATAAAAC+GGG | - | chr8_1:43028558-43028577 | Msa1195210:intron | 20.0% |
| !! | AAAAAAATTATTCTACATGC+GGG | - | chr8_1:43028668-43028687 | Msa1195210:intron | 20.0% |
| !! | TAAGCATATGATAAAATTAG+AGG | + | chr8_1:43029005-43029024 | None:intergenic | 20.0% |
| !! | TTAAAGTAACCTTCAAATTA+TGG | + | chr8_1:43029766-43029785 | None:intergenic | 20.0% |
| !! | CTAAGTTCACAATAATTAAT+AGG | + | chr8_1:43030269-43030288 | None:intergenic | 20.0% |
| !! | CTATTAATTATTGTGAACTT+AGG | - | chr8_1:43030267-43030286 | Msa1195210:CDS | 20.0% |
| !! | TAAAGAAGTTCAACAATATA+TGG | + | chr8_1:43030680-43030699 | None:intergenic | 20.0% |
| !! | ATATATTGTTGAACTTCTTT+AGG | - | chr8_1:43030679-43030698 | Msa1195210:CDS | 20.0% |
| !!! | CATTTTTTTGTCCGAAATAT+TGG | + | chr8_1:43026643-43026662 | None:intergenic | 25.0% |
| ! | TATTTATAATTTACCACGAG+AGG | - | chr8_1:43026753-43026772 | Msa1195210:intron | 25.0% |
| ! | TCGCAAATAAAATTAAGATC+CGG | + | chr8_1:43026779-43026798 | None:intergenic | 25.0% |
| !! | TTCTCATTCTTAAACTTGTT+TGG | - | chr8_1:43027189-43027208 | Msa1195210:intron | 25.0% |
| ! | TTATTAGAAAGAACAAAGGT+TGG | + | chr8_1:43027289-43027308 | None:intergenic | 25.0% |
| ! | TTGAAAAGAAATCTTGCTTA+AGG | - | chr8_1:43027582-43027601 | Msa1195210:intron | 25.0% |
| ! | TCCCTACAACAAAAAAATTT+AGG | - | chr8_1:43027979-43027998 | Msa1195210:intron | 25.0% |
| !!! | GTCCTAAATTTTTTTGTTGT+AGG | + | chr8_1:43027984-43028003 | None:intergenic | 25.0% |
| !!! | TTCATGTATTGGCTTATTTT+TGG | + | chr8_1:43028078-43028097 | None:intergenic | 25.0% |
| ! | CAATGACTATTTAGAAAAGT+TGG | - | chr8_1:43028134-43028153 | Msa1195210:intron | 25.0% |
| !!! | ATTTTGGAAATAGACGATTA+TGG | + | chr8_1:43028190-43028209 | None:intergenic | 25.0% |
| !! | ATTTTCCATTGTAACCAAAT+CGG | - | chr8_1:43028219-43028238 | Msa1195210:intron | 25.0% |
| ! | TTTCTTGTAAATAACCGATT+TGG | + | chr8_1:43028236-43028255 | None:intergenic | 25.0% |
| !!! | ATGTTTCATTTGTATTGGTT+TGG | + | chr8_1:43028352-43028371 | None:intergenic | 25.0% |
| ! | ACTACATGTTTCATTTGTAT+TGG | + | chr8_1:43028357-43028376 | None:intergenic | 25.0% |
| !! | TATTTATTATTTGGGATAGC+TGG | - | chr8_1:43028441-43028460 | Msa1195210:intron | 25.0% |
| ! | ACTTAACATACAATAAAACG+GGG | - | chr8_1:43028559-43028578 | Msa1195210:intron | 25.0% |
| ! | ACTCAAAAAGACATCTATTA+CGG | - | chr8_1:43028731-43028750 | Msa1195210:intron | 25.0% |
| ! | AGAAGATTTAAGAACAACTT+GGG | + | chr8_1:43028766-43028785 | None:intergenic | 25.0% |
| ! | AAGAAGATTTAAGAACAACT+TGG | + | chr8_1:43028767-43028786 | None:intergenic | 25.0% |
| ! | GGAAGAATTGTACTAAATAA+GGG | + | chr8_1:43028909-43028928 | None:intergenic | 25.0% |
| ! | TGGAAGAATTGTACTAAATA+AGG | + | chr8_1:43028910-43028929 | None:intergenic | 25.0% |
| !!! | TGTTTATCTTTAAGGTATCA+AGG | + | chr8_1:43028952-43028971 | None:intergenic | 25.0% |
| ! | ACACATGATGTTTATCTTTA+AGG | + | chr8_1:43028960-43028979 | None:intergenic | 25.0% |
| ! | TGATAAAATTAGAGGTAAAG+TGG | + | chr8_1:43028997-43029016 | None:intergenic | 25.0% |
| ! | TCGTTACAAACTTTACATAT+TGG | - | chr8_1:43029324-43029343 | Msa1195210:intron | 25.0% |
| !!! | TATATTCTCCAAGTTTTAGA+GGG | - | chr8_1:43029634-43029653 | Msa1195210:intron | 25.0% |
| !! | TTTTCATTACGACAATGAAT+TGG | - | chr8_1:43029805-43029824 | Msa1195210:intron | 25.0% |
| !!! | TGAATTGGATGCTTTTTTTA+AGG | - | chr8_1:43029820-43029839 | Msa1195210:intron | 25.0% |
| !!! | GAATTGGATGCTTTTTTTAA+GGG | - | chr8_1:43029821-43029840 | Msa1195210:intron | 25.0% |
| !! | TATAGGTACTATTTTATCGT+TGG | - | chr8_1:43029984-43030003 | Msa1195210:intron | 25.0% |
| !!! | AGTCATTAGAATGACTTTTT+TGG | + | chr8_1:43030231-43030250 | None:intergenic | 25.0% |
| !!! | TTTCTTATTTTTTAATCCGG+AGG | - | chr8_1:43030338-43030357 | Msa1195210:CDS | 25.0% |
| ! | AATTTAGTATGTCTTGATGA+TGG | + | chr8_1:43030405-43030424 | None:intergenic | 25.0% |
| ! | CTAAATATTCTTACAAGAGA+GGG | + | chr8_1:43030611-43030630 | None:intergenic | 25.0% |
| ! | TCTAAATATTCTTACAAGAG+AGG | + | chr8_1:43030612-43030631 | None:intergenic | 25.0% |
| !!! | GAGTTAATTATGTTTTTTCC+TGG | - | chr8_1:43030740-43030759 | Msa1195210:CDS | 25.0% |
| TGAAGGATTACAAAGATAAC+AGG | - | chr8_1:43026547-43026566 | Msa1195210:intron | 30.0% | |
| GATTACAAAGATAACAGGTT+AGG | - | chr8_1:43026552-43026571 | Msa1195210:intron | 30.0% | |
| ! | TTTTCGTCTCTAATTAATGC+CGG | - | chr8_1:43026694-43026713 | Msa1195210:CDS | 30.0% |
| TAATTACCATGACGTTGTAA+CGG | - | chr8_1:43026839-43026858 | Msa1195210:intron | 30.0% | |
| AGGACATAATGATCTGATTA+CGG | - | chr8_1:43026881-43026900 | Msa1195210:intron | 30.0% | |
| !! | GTTCATCTTCTTCTGAAATT+GGG | + | chr8_1:43026941-43026960 | None:intergenic | 30.0% |
| !! | TGTTCATCTTCTTCTGAAAT+TGG | + | chr8_1:43026942-43026961 | None:intergenic | 30.0% |
| ATGTGAAATGACAATTCCAT+TGG | - | chr8_1:43026983-43027002 | Msa1195210:intron | 30.0% | |
| !!! | AGAGGTTTTAATTCTTCCAA+TGG | + | chr8_1:43027002-43027021 | None:intergenic | 30.0% |
| TCTAATAAAGAAGAAGCTAC+TGG | - | chr8_1:43027301-43027320 | Msa1195210:intron | 30.0% | |
| CTAATAAAGAAGAAGCTACT+GGG | - | chr8_1:43027302-43027321 | Msa1195210:intron | 30.0% | |
| AACTCAAACATTCATCTAGT+CGG | - | chr8_1:43027449-43027468 | Msa1195210:intron | 30.0% | |
| TGCATTGTTCTATTGCTAAT+AGG | - | chr8_1:43027540-43027559 | Msa1195210:intron | 30.0% | |
| TGTTCTATTGCTAATAGGTT+TGG | - | chr8_1:43027545-43027564 | Msa1195210:intron | 30.0% | |
| TGATCGTAAACATGTCTATA+TGG | + | chr8_1:43027648-43027667 | None:intergenic | 30.0% | |
| ACATGTTTACGATCAAAGAT+AGG | - | chr8_1:43027653-43027672 | Msa1195210:intron | 30.0% | |
| CAATGAAAAAATTTACGCAG+AGG | - | chr8_1:43027775-43027794 | Msa1195210:intron | 30.0% | |
| !! | AATAACCGATTTGGTTACAA+TGG | + | chr8_1:43028227-43028246 | None:intergenic | 30.0% |
| ! | TTGGCAATTGAACTAGTTTA+AGG | - | chr8_1:43028410-43028429 | Msa1195210:intron | 30.0% |
| CTTAACATACAATAAAACGG+GGG | - | chr8_1:43028560-43028579 | Msa1195210:intron | 30.0% | |
| TTAACATACAATAAAACGGG+GGG | - | chr8_1:43028561-43028580 | Msa1195210:intron | 30.0% | |
| !!! | GGACTATTTTTTAGAACTAG+TGG | + | chr8_1:43028618-43028637 | None:intergenic | 30.0% |
| !! | GTAATAGATGTCTTTTTGAG+TGG | + | chr8_1:43028732-43028751 | None:intergenic | 30.0% |
| !! | AAATGGACTATGCTTTCTTT+GGG | + | chr8_1:43028822-43028841 | None:intergenic | 30.0% |
| !! | TAAATGGACTATGCTTTCTT+TGG | + | chr8_1:43028823-43028842 | None:intergenic | 30.0% |
| AATGGGAAACATTAGGTAAA+TGG | + | chr8_1:43028839-43028858 | None:intergenic | 30.0% | |
| TGGATATTGAAGATAACATG+AGG | - | chr8_1:43029054-43029073 | Msa1195210:intron | 30.0% | |
| GGATATTGAAGATAACATGA+GGG | - | chr8_1:43029055-43029074 | Msa1195210:intron | 30.0% | |
| ! | AAGAAGGTGTACCATTATTA+GGG | - | chr8_1:43029101-43029120 | Msa1195210:intron | 30.0% |
| ACCATTATTAGGGAATATCA+AGG | - | chr8_1:43029111-43029130 | Msa1195210:intron | 30.0% | |
| TCCTTGATATTCCCTAATAA+TGG | + | chr8_1:43029115-43029134 | None:intergenic | 30.0% | |
| TGCATTAGTTGTACGATATT+CGG | - | chr8_1:43029194-43029213 | Msa1195210:intron | 30.0% | |
| AACTTTACATATTGGAGTGT+TGG | - | chr8_1:43029332-43029351 | Msa1195210:intron | 30.0% | |
| TGGATAAACCTTAATGCAAA+TGG | - | chr8_1:43029555-43029574 | Msa1195210:intron | 30.0% | |
| ATAAACCTTAATGCAAATGG+AGG | - | chr8_1:43029558-43029577 | Msa1195210:intron | 30.0% | |
| !! | GTATATTCTCCAAGTTTTAG+AGG | - | chr8_1:43029633-43029652 | Msa1195210:intron | 30.0% |
| !!! | AGCTCCATTTTGATTTCATA+GGG | - | chr8_1:43029738-43029757 | Msa1195210:intron | 30.0% |
| !!! | TTTTTTTAAGGGTGCTTCTA+TGG | - | chr8_1:43029832-43029851 | Msa1195210:intron | 30.0% |
| TGTTACACTTAAAACAAGGT+AGG | - | chr8_1:43030073-43030092 | Msa1195210:CDS | 30.0% | |
| ! | GATGAATTGATGATACTATG+TGG | - | chr8_1:43030129-43030148 | Msa1195210:CDS | 30.0% |
| AAATAACAAGACATAGTTCG+TGG | + | chr8_1:43030315-43030334 | None:intergenic | 30.0% | |
| TTTATCATGAATTCTTCCTC+CGG | + | chr8_1:43030357-43030376 | None:intergenic | 30.0% | |
| TTACATAGAGACTTACTATG+AGG | - | chr8_1:43030542-43030561 | Msa1195210:intron | 30.0% | |
| !! | ATATGCAAAGGCATCATCTT+CGG | + | chr8_1:43026463-43026482 | None:intergenic | 35.0% |
| TGATGCCTTTGCATATCTTA+AGG | - | chr8_1:43026467-43026486 | Msa1195210:CDS | 35.0% | |
| CAAGAGTGATTGAAAGAATG+TGG | + | chr8_1:43026595-43026614 | None:intergenic | 35.0% | |
| CCAATCACTGACCAATATTT+CGG | - | chr8_1:43026629-43026648 | Msa1195210:intron | 35.0% | |
| GGACATAATGATCTGATTAC+GGG | - | chr8_1:43026882-43026901 | Msa1195210:intron | 35.0% | |
| ! | ATTGGGATTTGATAACCACT+TGG | + | chr8_1:43026924-43026943 | None:intergenic | 35.0% |
| ACATTCATCAAGATTCCTAG+GGG | + | chr8_1:43026967-43026986 | None:intergenic | 35.0% | |
| CACATTCATCAAGATTCCTA+GGG | + | chr8_1:43026968-43026987 | None:intergenic | 35.0% | |
| TCACATTCATCAAGATTCCT+AGG | + | chr8_1:43026969-43026988 | None:intergenic | 35.0% | |
| ACAAACTCATTAGCATGTTC+AGG | + | chr8_1:43027101-43027120 | None:intergenic | 35.0% | |
| AACATGCTAATGAGTTTGTC+AGG | - | chr8_1:43027102-43027121 | Msa1195210:intron | 35.0% | |
| TGAGTTTGTCAGGAAAGTTA+AGG | - | chr8_1:43027112-43027131 | Msa1195210:intron | 35.0% | |
| GACGTCAATTTCCTTAACTT+AGG | + | chr8_1:43027257-43027276 | None:intergenic | 35.0% | |
| ! | GGGTATCAAGATTAGCTATA+AGG | - | chr8_1:43027322-43027341 | Msa1195210:intron | 35.0% |
| CATTGTCACCTTCTTAATGA+AGG | + | chr8_1:43027477-43027496 | None:intergenic | 35.0% | |
| CTTCATTAAGAAGGTGACAA+TGG | - | chr8_1:43027475-43027494 | Msa1195210:intron | 35.0% | |
| ! | CTCTATTGGTAGTAGTCTAT+TGG | + | chr8_1:43027504-43027523 | None:intergenic | 35.0% |
| CTATTGCTAATAGGTTTGGA+AGG | - | chr8_1:43027549-43027568 | Msa1195210:intron | 35.0% | |
| ATGTGATGTGCTTAATGTGT+GGG | - | chr8_1:43027704-43027723 | Msa1195210:intron | 35.0% | |
| !!! | TATTTTTTTTGGGGTAGGCA+AGG | - | chr8_1:43028496-43028515 | Msa1195210:intron | 35.0% |
| ! | TATGTTAAGTTTTCGCACCA+GGG | + | chr8_1:43028549-43028568 | None:intergenic | 35.0% |
| TAACATACAATAAAACGGGG+GGG | - | chr8_1:43028562-43028581 | Msa1195210:intron | 35.0% | |
| CATGTCCATCTTGTATTCTT+GGG | - | chr8_1:43028637-43028656 | Msa1195210:intron | 35.0% | |
| ATGTCCATCTTGTATTCTTG+GGG | - | chr8_1:43028638-43028657 | Msa1195210:intron | 35.0% | |
| AAGACTTTAATGCACACACA+TGG | + | chr8_1:43028705-43028724 | None:intergenic | 35.0% | |
| TTTAAGAACAACTTGGGCTA+TGG | + | chr8_1:43028760-43028779 | None:intergenic | 35.0% | |
| CTACACTACATAGGACATTA+CGG | + | chr8_1:43028877-43028896 | None:intergenic | 35.0% | |
| GTAATGTCCTATGTAGTGTA+GGG | - | chr8_1:43028876-43028895 | Msa1195210:intron | 35.0% | |
| GCTTTCAAGAAGAATTTGAG+TGG | + | chr8_1:43028930-43028949 | None:intergenic | 35.0% | |
| TCATATGCTTACCATATGCT+AGG | - | chr8_1:43029014-43029033 | Msa1195210:intron | 35.0% | |
| !!! | CATATGCTAGGTGGTTTTAA+GGG | - | chr8_1:43029026-43029045 | Msa1195210:intron | 35.0% |
| ! | GAAGAAGGTGTACCATTATT+AGG | - | chr8_1:43029100-43029119 | Msa1195210:intron | 35.0% |
| CATGCATACTTTGATGTACA+TGG | - | chr8_1:43029221-43029240 | Msa1195210:intron | 35.0% | |
| !! | CGACTGATGTTTGTTTTTCT+CGG | - | chr8_1:43029254-43029273 | Msa1195210:intron | 35.0% |
| !!! | TTTTTCTCGGCTAGTTTTGA+TGG | - | chr8_1:43029267-43029286 | Msa1195210:intron | 35.0% |
| !!! | TTTTCTCGGCTAGTTTTGAT+GGG | - | chr8_1:43029268-43029287 | Msa1195210:intron | 35.0% |
| !! | TTTACATATTGGAGTGTTGG+TGG | - | chr8_1:43029335-43029354 | Msa1195210:intron | 35.0% |
| !! | TTACATATTGGAGTGTTGGT+GGG | - | chr8_1:43029336-43029355 | Msa1195210:intron | 35.0% |
| !! | GGAAAACTTCTTGTTATTCC+TGG | - | chr8_1:43029358-43029377 | Msa1195210:intron | 35.0% |
| !! | AAACTTCTTGTTATTCCTGG+TGG | - | chr8_1:43029361-43029380 | Msa1195210:intron | 35.0% |
| AACTTGGCCAAGTATTAACA+CGG | - | chr8_1:43029453-43029472 | Msa1195210:intron | 35.0% | |
| AATTGCACCGTGTTAATACT+TGG | + | chr8_1:43029463-43029482 | None:intergenic | 35.0% | |
| AAGTATTAACACGGTGCAAT+TGG | - | chr8_1:43029462-43029481 | Msa1195210:intron | 35.0% | |
| AGTATTAACACGGTGCAATT+GGG | - | chr8_1:43029463-43029482 | Msa1195210:intron | 35.0% | |
| GATTGTGGTGGTTTAATTCA+AGG | - | chr8_1:43029590-43029609 | Msa1195210:intron | 35.0% | |
| GGTTTAATTCAAGGTTCTCA+TGG | - | chr8_1:43029599-43029618 | Msa1195210:intron | 35.0% | |
| AACCTTAAACCTATGTCATG+AGG | + | chr8_1:43029713-43029732 | None:intergenic | 35.0% | |
| !!! | GAGCTCCATTTTGATTTCAT+AGG | - | chr8_1:43029737-43029756 | Msa1195210:intron | 35.0% |
| !!! | AGTCAGGAAACTGACTTTTT+TGG | - | chr8_1:43029858-43029877 | Msa1195210:intron | 35.0% |
| TAGTAATGCTTGCAACATCT+TGG | - | chr8_1:43029958-43029977 | Msa1195210:intron | 35.0% | |
| TTGCAACATCTTGGACTTAT+AGG | - | chr8_1:43029967-43029986 | Msa1195210:intron | 35.0% | |
| TCTTAAGTGCTACACTTTGT+GGG | - | chr8_1:43030049-43030068 | Msa1195210:intron | 35.0% | |
| TCATGAACATGCTGATAGAT+AGG | - | chr8_1:43030511-43030530 | Msa1195210:intron | 35.0% | |
| GACTGCCTTAAGATATGCAA+AGG | + | chr8_1:43026475-43026494 | None:intergenic | 40.0% | |
| TGCATATCTTAAGGCAGTCA+AGG | - | chr8_1:43026476-43026495 | Msa1195210:CDS | 40.0% | |
| ! | GGACGTTTTCAGAGAACAAA+TGG | - | chr8_1:43026497-43026516 | Msa1195210:intron | 40.0% |
| CCGAAATATTGGTCAGTGAT+TGG | + | chr8_1:43026632-43026651 | None:intergenic | 40.0% | |
| TATAATTTACCACGAGAGGC+CGG | - | chr8_1:43026757-43026776 | Msa1195210:intron | 40.0% | |
| GAGGTGAAGGAGTTGTTTAA+AGG | - | chr8_1:43026861-43026880 | Msa1195210:intron | 40.0% | |
| TTCAACATCTTTGCACCAAG+TGG | - | chr8_1:43026906-43026925 | Msa1195210:intron | 40.0% | |
| CATTCATCAAGATTCCTAGG+GGG | + | chr8_1:43026966-43026985 | None:intergenic | 40.0% | |
| AGCATATCACAACTCCATCA+AGG | - | chr8_1:43027057-43027076 | Msa1195210:intron | 40.0% | |
| CCAAATGGTTCATTCCTTGA+TGG | + | chr8_1:43027074-43027093 | None:intergenic | 40.0% | |
| CCATCAAGGAATGAACCATT+TGG | - | chr8_1:43027071-43027090 | Msa1195210:intron | 40.0% | |
| TCAAGGAATGAACCATTTGG+TGG | - | chr8_1:43027074-43027093 | Msa1195210:intron | 40.0% | |
| ! | ATTTTCCTAAGTCACCCACT+GGG | - | chr8_1:43027216-43027235 | Msa1195210:intron | 40.0% |
| TTCCTTAACTTAGGTCCCTA+AGG | + | chr8_1:43027248-43027267 | None:intergenic | 40.0% | |
| AGTCGGTACCTTCATTAAGA+AGG | - | chr8_1:43027466-43027485 | Msa1195210:intron | 40.0% | |
| GAAATCTTGCTTAAGGAGCA+AGG | - | chr8_1:43027589-43027608 | Msa1195210:intron | 40.0% | |
| CATGTGATGTGCTTAATGTG+TGG | - | chr8_1:43027703-43027722 | Msa1195210:intron | 40.0% | |
| TGCTTAATGTGTGGGAAGTT+TGG | - | chr8_1:43027712-43027731 | Msa1195210:intron | 40.0% | |
| AAGTTTGGTCACAACATGGA+GGG | - | chr8_1:43027727-43027746 | Msa1195210:intron | 40.0% | |
| TGTAGCCCTTCATATAGATG+GGG | + | chr8_1:43028525-43028544 | None:intergenic | 40.0% | |
| GTGTAGCCCTTCATATAGAT+GGG | + | chr8_1:43028526-43028545 | None:intergenic | 40.0% | |
| ! | ATGTTAAGTTTTCGCACCAG+GGG | + | chr8_1:43028548-43028567 | None:intergenic | 40.0% |
| ! | GTATGTTAAGTTTTCGCACC+AGG | + | chr8_1:43028550-43028569 | None:intergenic | 40.0% |
| AACATACAATAAAACGGGGG+GGG | - | chr8_1:43028563-43028582 | Msa1195210:intron | 40.0% | |
| CCAAGAATACAAGATGGACA+TGG | + | chr8_1:43028639-43028658 | None:intergenic | 40.0% | |
| CCATGTCCATCTTGTATTCT+TGG | - | chr8_1:43028636-43028655 | Msa1195210:intron | 40.0% | |
| ACTTTAATGCACACACATGG+AGG | + | chr8_1:43028702-43028721 | None:intergenic | 40.0% | |
| ! | GACTATGCTTTCTTTGGGAA+GGG | + | chr8_1:43028817-43028836 | None:intergenic | 40.0% |
| CAGAAGCAATGGGAAACATT+AGG | + | chr8_1:43028846-43028865 | None:intergenic | 40.0% | |
| CGTAATGTCCTATGTAGTGT+AGG | - | chr8_1:43028875-43028894 | Msa1195210:intron | 40.0% | |
| AGATAAGCCCTACACTACAT+AGG | + | chr8_1:43028886-43028905 | None:intergenic | 40.0% | |
| TATGCTTACCATATGCTAGG+TGG | - | chr8_1:43029017-43029036 | Msa1195210:intron | 40.0% | |
| CCTTAAAACCACCTAGCATA+TGG | + | chr8_1:43029028-43029047 | None:intergenic | 40.0% | |
| !! | CCATATGCTAGGTGGTTTTA+AGG | - | chr8_1:43029025-43029044 | Msa1195210:intron | 40.0% |
| ATAACATGAGGGTCATTCAG+AGG | - | chr8_1:43029066-43029085 | Msa1195210:intron | 40.0% | |
| ATCAAGGACGATGCAATTAG+AGG | - | chr8_1:43029127-43029146 | Msa1195210:intron | 40.0% | |
| !! | TACATATTGGAGTGTTGGTG+GGG | - | chr8_1:43029337-43029356 | Msa1195210:intron | 40.0% |
| !! | CTTATTTTCTTGTCTCCACC+AGG | + | chr8_1:43029379-43029398 | None:intergenic | 40.0% |
| CTGGTGGAGACAAGAAAATA+AGG | - | chr8_1:43029377-43029396 | Msa1195210:intron | 40.0% | |
| ! | ATTCTACATCCCCTTTTCTG+TGG | - | chr8_1:43029418-43029437 | Msa1195210:intron | 40.0% |
| ! | TTCTACATCCCCTTTTCTGT+GGG | - | chr8_1:43029419-43029438 | Msa1195210:intron | 40.0% |
| AAATCACCACCCACAGAAAA+GGG | + | chr8_1:43029431-43029450 | None:intergenic | 40.0% | |
| TAAATCACCACCCACAGAAA+AGG | + | chr8_1:43029432-43029451 | None:intergenic | 40.0% | |
| GTGGGTGGTGATTTATAACT+TGG | - | chr8_1:43029437-43029456 | Msa1195210:intron | 40.0% | |
| AGGTTTATCCACCTTCCATA+AGG | + | chr8_1:43029546-43029565 | None:intergenic | 40.0% | |
| TAGAGCCTCCATTTGCATTA+AGG | + | chr8_1:43029566-43029585 | None:intergenic | 40.0% | |
| TTCAAGGTTCTCATGGTCAA+TGG | - | chr8_1:43029606-43029625 | Msa1195210:intron | 40.0% | |
| AAATTTATGGGGTGTGCTTG+AGG | - | chr8_1:43029676-43029695 | Msa1195210:intron | 40.0% | |
| AATTTATGGGGTGTGCTTGA+GGG | - | chr8_1:43029677-43029696 | Msa1195210:intron | 40.0% | |
| TTGTCTTTGCCTCATGACAT+AGG | - | chr8_1:43029701-43029720 | Msa1195210:intron | 40.0% | |
| TGCCTCATGACATAGGTTTA+AGG | - | chr8_1:43029708-43029727 | Msa1195210:intron | 40.0% | |
| ! | TGACATAGGTTTAAGGTTCG+TGG | - | chr8_1:43029715-43029734 | Msa1195210:intron | 40.0% |
| GGAGCCCTATGAAATCAAAA+TGG | + | chr8_1:43029745-43029764 | None:intergenic | 40.0% | |
| CATAGGGCTCCATAATTTGA+AGG | - | chr8_1:43029754-43029773 | Msa1195210:intron | 40.0% | |
| GTCTTAAGTGCTACACTTTG+TGG | - | chr8_1:43030048-43030067 | Msa1195210:intron | 40.0% | |
| CTTAAGTGCTACACTTTGTG+GGG | - | chr8_1:43030050-43030069 | Msa1195210:intron | 40.0% | |
| ! | GGGGTGTTACACTTAAAACA+AGG | - | chr8_1:43030069-43030088 | Msa1195210:CDS | 40.0% |
| TGATGCCACTGTACAAATAG+TGG | - | chr8_1:43030162-43030181 | Msa1195210:CDS | 40.0% | |
| GATGCCACTGTACAAATAGT+GGG | - | chr8_1:43030163-43030182 | Msa1195210:CDS | 40.0% | |
| ATGCCACTGTACAAATAGTG+GGG | - | chr8_1:43030164-43030183 | Msa1195210:CDS | 40.0% | |
| ATATTTGCTTTCCGCAGACT+CGG | - | chr8_1:43030448-43030467 | Msa1195210:intron | 40.0% | |
| TTACCATGACGTTGTAACGG+AGG | - | chr8_1:43026842-43026861 | Msa1195210:intron | 45.0% | |
| AAGAAGATGAACAACCCCCT+AGG | - | chr8_1:43026949-43026968 | Msa1195210:intron | 45.0% | |
| TGAGGAGATTGTGCATTGAG+AGG | + | chr8_1:43027020-43027039 | None:intergenic | 45.0% | |
| CAATCTCCTCAGATGATGCT+TGG | - | chr8_1:43027029-43027048 | Msa1195210:intron | 45.0% | |
| TCTTCTCCAAGCATCATCTG+AGG | + | chr8_1:43027038-43027057 | None:intergenic | 45.0% | |
| ! | CATTTTCCTAAGTCACCCAC+TGG | - | chr8_1:43027215-43027234 | Msa1195210:intron | 45.0% |
| ! | TTTTCCTAAGTCACCCACTG+GGG | - | chr8_1:43027217-43027236 | Msa1195210:intron | 45.0% |
| CACCTTAGGGACCTAAGTTA+AGG | - | chr8_1:43027243-43027262 | Msa1195210:intron | 45.0% | |
| !! | GGCAAATATGCTCGCTTTTG+TGG | - | chr8_1:43027610-43027629 | Msa1195210:intron | 45.0% |
| TGGGAAGTTTGGTCACAACA+TGG | - | chr8_1:43027723-43027742 | Msa1195210:intron | 45.0% | |
| GAAGTTTGGTCACAACATGG+AGG | - | chr8_1:43027726-43027745 | Msa1195210:intron | 45.0% | |
| AGGCTACCCCATCTATATGA+AGG | - | chr8_1:43028516-43028535 | Msa1195210:intron | 45.0% | |
| GGCTACCCCATCTATATGAA+GGG | - | chr8_1:43028517-43028536 | Msa1195210:intron | 45.0% | |
| GGTGTAGCCCTTCATATAGA+TGG | + | chr8_1:43028527-43028546 | None:intergenic | 45.0% | |
| ACATACAATAAAACGGGGGG+GGG | - | chr8_1:43028564-43028583 | Msa1195210:intron | 45.0% | |
| ACTGCCCCAAGAATACAAGA+TGG | + | chr8_1:43028645-43028664 | None:intergenic | 45.0% | |
| ! | GGACTATGCTTTCTTTGGGA+AGG | + | chr8_1:43028818-43028837 | None:intergenic | 45.0% |
| GGTGAAGCTTCAGAAGCAAT+GGG | + | chr8_1:43028856-43028875 | None:intergenic | 45.0% | |
| GAGGTTTCTTGTGACGAAGA+AGG | - | chr8_1:43029085-43029104 | Msa1195210:intron | 45.0% | |
| AATCACCACCCACAGAAAAG+GGG | + | chr8_1:43029430-43029449 | None:intergenic | 45.0% | |
| ! | TGCAATTGGGTTGCACCAAA+AGG | - | chr8_1:43029476-43029495 | Msa1195210:intron | 45.0% |
| ! | AATTGGGTTGCACCAAAAGG+TGG | - | chr8_1:43029479-43029498 | Msa1195210:intron | 45.0% |
| ! | TAGGCACAGTTTCCACCTTT+TGG | + | chr8_1:43029494-43029513 | None:intergenic | 45.0% |
| GAAACTGTGCCTAGAGTTCA+GGG | - | chr8_1:43029501-43029520 | Msa1195210:intron | 45.0% | |
| CCAATGAAACCCTGAACTCT+AGG | + | chr8_1:43029513-43029532 | None:intergenic | 45.0% | |
| CCTAGAGTTCAGGGTTTCAT+TGG | - | chr8_1:43029510-43029529 | Msa1195210:intron | 45.0% | |
| GAGTTCAGGGTTTCATTGGT+TGG | - | chr8_1:43029514-43029533 | Msa1195210:intron | 45.0% | |
| ! | TTCAGGGTTTCATTGGTTGG+AGG | - | chr8_1:43029517-43029536 | Msa1195210:intron | 45.0% |
| ATTGGTTGGAGGAAGCCTTA+TGG | - | chr8_1:43029528-43029547 | Msa1195210:intron | 45.0% | |
| !! | TGGAGGCTCTAAAACGATTG+TGG | - | chr8_1:43029575-43029594 | Msa1195210:intron | 45.0% |
| !! | AGGCTCTAAAACGATTGTGG+TGG | - | chr8_1:43029578-43029597 | Msa1195210:intron | 45.0% |
| !! | GTTGCACACCCTCTAAAACT+TGG | + | chr8_1:43029645-43029664 | None:intergenic | 45.0% |
| CAAGACATAGTTCGTGGACT+CGG | + | chr8_1:43030309-43030328 | None:intergenic | 45.0% | |
| GAGAGGGAAGAGTCATTGAA+AGG | + | chr8_1:43030595-43030614 | None:intergenic | 45.0% | |
| ! | TCTTTAGGCTGCTGCACTTT+TGG | - | chr8_1:43030694-43030713 | Msa1195210:CDS | 45.0% |
| !!! | CTTATAAATTATAATTTTTT+AGG | - | chr8_1:43027870-43027889 | Msa1195210:intron | 5.0% |
| !!! | ATTATATTTATGTTAATTTT+TGG | - | chr8_1:43028391-43028410 | Msa1195210:intron | 5.0% |
| AATTAAGATCCGGCCTCTCG+TGG | + | chr8_1:43026769-43026788 | None:intergenic | 50.0% | |
| TCACCTCCGTTACAACGTCA+TGG | + | chr8_1:43026848-43026867 | None:intergenic | 50.0% | |
| ! | TGACGTTGTAACGGAGGTGA+AGG | - | chr8_1:43026848-43026867 | Msa1195210:intron | 50.0% |
| GCATGTTCAGGTCCACCAAA+TGG | + | chr8_1:43027089-43027108 | None:intergenic | 50.0% | |
| TTTCCTAAGTCACCCACTGG+GGG | - | chr8_1:43027218-43027237 | Msa1195210:intron | 50.0% | |
| TATATGAAGGGCTACACCCC+TGG | - | chr8_1:43028529-43028548 | Msa1195210:intron | 50.0% | |
| CATACAATAAAACGGGGGGG+GGG | - | chr8_1:43028565-43028584 | Msa1195210:intron | 50.0% | |
| ATACAATAAAACGGGGGGGG+GGG | - | chr8_1:43028566-43028585 | Msa1195210:intron | 50.0% | |
| CGGTGAAGCTTCAGAAGCAA+TGG | + | chr8_1:43028857-43028876 | None:intergenic | 50.0% | |
| !!! | AGGTGGTTTTAAGGGCGAGA+TGG | - | chr8_1:43029034-43029053 | Msa1195210:intron | 50.0% |
| !!! | CTCGGCTAGTTTTGATGGGT+AGG | - | chr8_1:43029272-43029291 | Msa1195210:intron | 50.0% |
| ! | TACATCCCCTTTTCTGTGGG+TGG | - | chr8_1:43029422-43029441 | Msa1195210:intron | 50.0% |
| GGAAACTGTGCCTAGAGTTC+AGG | - | chr8_1:43029500-43029519 | Msa1195210:intron | 50.0% | |
| ! | GTTGGAGGAAGCCTTATGGA+AGG | - | chr8_1:43029532-43029551 | Msa1195210:intron | 50.0% |
| GCACCCCACTATTTGTACAG+TGG | + | chr8_1:43030170-43030189 | None:intergenic | 50.0% | |
| ! | TTTCCGCAGACTCGGTATGA+AGG | - | chr8_1:43030456-43030475 | Msa1195210:intron | 50.0% |
| TCACCTTCATACCGAGTCTG+CGG | + | chr8_1:43030462-43030481 | None:intergenic | 50.0% | |
| ! | TTAGGCTGCTGCACTTTTGG+AGG | - | chr8_1:43030697-43030716 | Msa1195210:CDS | 50.0% |
| ! | TAGGCTGCTGCACTTTTGGA+GGG | - | chr8_1:43030698-43030717 | Msa1195210:CDS | 50.0% |
| TACAATAAAACGGGGGGGGG+GGG | - | chr8_1:43028567-43028586 | Msa1195210:intron | 55.0% | |
| ! | GGAGGAAGCCTTATGGAAGG+TGG | - | chr8_1:43029535-43029554 | Msa1195210:intron | 55.0% |
| GGTGCTTCTATGGTGCAGTC+AGG | - | chr8_1:43029842-43029861 | Msa1195210:intron | 55.0% | |
| GTACCCCCAGTGGGTGACTT+AGG | + | chr8_1:43027224-43027243 | None:intergenic | 60.0% | |
| ! | ACCCACTGGGGGTACACCTT+AGG | - | chr8_1:43027229-43027248 | Msa1195210:intron | 60.0% |
| CCCTAAGGTGTACCCCCAGT+GGG | + | chr8_1:43027233-43027252 | None:intergenic | 60.0% | |
| ! | CCCACTGGGGGTACACCTTA+GGG | - | chr8_1:43027230-43027249 | Msa1195210:intron | 60.0% |
| TCCCTAAGGTGTACCCCCAG+TGG | + | chr8_1:43027234-43027253 | None:intergenic | 60.0% | |
| ACAATAAAACGGGGGGGGGG+GGG | - | chr8_1:43028568-43028587 | Msa1195210:intron | 60.0% | |
| CAATAAAACGGGGGGGGGGG+GGG | - | chr8_1:43028569-43028588 | Msa1195210:intron | 65.0% | |
| AATAAAACGGGGGGGGGGGG+GGG | - | chr8_1:43028570-43028589 | Msa1195210:intron | 65.0% | |
| ATAAAACGGGGGGGGGGGGG+GGG | - | chr8_1:43028571-43028590 | Msa1195210:intron | 70.0% | |
| TAAAACGGGGGGGGGGGGGG+GGG | - | chr8_1:43028572-43028591 | Msa1195210:intron | 75.0% | |
| ! | AAAACGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028573-43028592 | Msa1195210:intron | 80.0% |
| ! | AAACGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028574-43028593 | Msa1195210:intron | 85.0% |
| ! | AACGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028575-43028594 | Msa1195210:intron | 90.0% |
| ! | ACGGGGGGGGGGGGGGGGGG+GGG | - | chr8_1:43028576-43028595 | Msa1195210:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 43026429 | 43030769 | 43026429 | ID=Msa1195210;Name=Msa1195210 |
| chr8_1 | mRNA | 43026429 | 43030769 | 43026429 | ID=Msa1195210-mRNA-1;Parent=Msa1195210;Name=Msa1195210-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|4|0|201 |
| chr8_1 | exon | 43030630 | 43030769 | 43030630 | ID=Msa1195210-mRNA-1:exon:13898;Parent=Msa1195210-mRNA-1 |
| chr8_1 | exon | 43030065 | 43030362 | 43030065 | ID=Msa1195210-mRNA-1:exon:13897;Parent=Msa1195210-mRNA-1 |
| chr8_1 | exon | 43026635 | 43026733 | 43026635 | ID=Msa1195210-mRNA-1:exon:13896;Parent=Msa1195210-mRNA-1 |
| chr8_1 | exon | 43026429 | 43026497 | 43026429 | ID=Msa1195210-mRNA-1:exon:13895;Parent=Msa1195210-mRNA-1 |
| chr8_1 | CDS | 43030630 | 43030769 | 43030630 | ID=Msa1195210-mRNA-1:cds;Parent=Msa1195210-mRNA-1 |
| chr8_1 | CDS | 43030065 | 43030362 | 43030065 | ID=Msa1195210-mRNA-1:cds;Parent=Msa1195210-mRNA-1 |
| chr8_1 | CDS | 43026635 | 43026733 | 43026635 | ID=Msa1195210-mRNA-1:cds;Parent=Msa1195210-mRNA-1 |
| chr8_1 | CDS | 43026429 | 43026497 | 43026429 | ID=Msa1195210-mRNA-1:cds;Parent=Msa1195210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
