Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1196250 | XP_013445809.1 | 83.813 | 278 | 33 | 2 | 1 | 268 | 1 | 276 | 4.04e-162 | 461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1196250 | sp|Q9LFQ3|SNL2_ARATH | 30.851 | 188 | 101 | 4 | 69 | 253 | 236 | 397 | 5.11e-16 | 81.3 |
| Msa1196250 | sp|Q9LFQ3|SNL2_ARATH | 44.928 | 69 | 38 | 0 | 115 | 183 | 330 | 398 | 2.87e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1196250 | A0A072U246 | 83.813 | 278 | 33 | 2 | 1 | 268 | 1 | 276 | 1.93e-162 | 461 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1196250 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1196250 | MtrunA17_Chr8g0362641 | 83.813 | 278 | 33 | 2 | 1 | 268 | 1 | 276 | 3.71e-166 | 461 |
| Msa1196250 | MtrunA17_Chr8g0364231 | 59.259 | 81 | 33 | 0 | 191 | 271 | 341 | 421 | 4.61e-25 | 104 |
| Msa1196250 | MtrunA17_Chr6g0452001 | 47.619 | 84 | 44 | 0 | 186 | 269 | 342 | 425 | 1.13e-19 | 88.6 |
| Msa1196250 | MtrunA17_Chr5g0415031 | 32.500 | 200 | 114 | 3 | 70 | 267 | 225 | 405 | 1.57e-19 | 88.2 |
| Msa1196250 | MtrunA17_Chr6g0452021 | 50.667 | 75 | 37 | 0 | 186 | 260 | 275 | 349 | 2.93e-18 | 84.0 |
| Msa1196250 | MtrunA17_Chr6g0452021 | 37.589 | 141 | 52 | 2 | 79 | 183 | 203 | 343 | 2.87e-17 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1196250 | AT1G24190.3 | 31.250 | 208 | 123 | 7 | 69 | 271 | 178 | 370 | 2.21e-17 | 82.4 |
| Msa1196250 | AT1G24190.2 | 31.250 | 208 | 123 | 7 | 69 | 271 | 178 | 370 | 2.51e-17 | 82.4 |
| Msa1196250 | AT5G15020.2 | 30.851 | 188 | 101 | 4 | 69 | 253 | 236 | 397 | 4.59e-17 | 81.6 |
| Msa1196250 | AT5G15020.2 | 44.928 | 69 | 38 | 0 | 115 | 183 | 330 | 398 | 2.76e-12 | 67.4 |
| Msa1196250 | AT3G01320.2 | 52.857 | 70 | 33 | 0 | 184 | 253 | 320 | 389 | 4.64e-17 | 81.6 |
| Msa1196250 | AT3G01320.2 | 40.698 | 86 | 48 | 1 | 101 | 183 | 305 | 390 | 2.45e-12 | 67.4 |
| Msa1196250 | AT5G15020.1 | 30.851 | 188 | 101 | 4 | 69 | 253 | 236 | 397 | 5.20e-17 | 81.3 |
| Msa1196250 | AT5G15020.1 | 44.928 | 69 | 38 | 0 | 115 | 183 | 330 | 398 | 2.92e-12 | 67.0 |
| Msa1196250 | AT1G24190.1 | 32.143 | 196 | 113 | 7 | 69 | 259 | 178 | 358 | 9.24e-17 | 80.5 |
| Msa1196250 | AT3G01320.1 | 52.174 | 69 | 33 | 0 | 185 | 253 | 333 | 401 | 3.38e-16 | 79.0 |
| Msa1196250 | AT3G01320.1 | 44.928 | 69 | 38 | 0 | 115 | 183 | 334 | 402 | 4.55e-12 | 66.6 |
| Msa1196250 | AT1G70060.2 | 41.176 | 85 | 49 | 1 | 187 | 271 | 303 | 386 | 3.10e-15 | 75.9 |
| Msa1196250 | AT1G70060.1 | 41.176 | 85 | 49 | 1 | 187 | 271 | 303 | 386 | 3.10e-15 | 75.9 |
Find 56 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAACAGGTGTATGATTTAT+TGG | 0.108276 | 8_1:+45070110 | Msa1196250:intron |
| CCGAGGGGAATTACAATTAT+TGG | 0.167850 | 8_1:+45069715 | Msa1196250:CDS |
| ATCAAACCTTTGTTAAATTC+TGG | 0.224271 | 8_1:-45067954 | None:intergenic |
| GTCAGCAACATCATTATCTT+TGG | 0.235712 | 8_1:-45065430 | None:intergenic |
| GGGAAAATATACCGATCTTA+TGG | 0.254179 | 8_1:+45070131 | Msa1196250:CDS |
| TTGAAAATCGTTGGCCTTCC+CGG | 0.284276 | 8_1:-45067898 | None:intergenic |
| GGTAGATAGCGTGGGGCGTT+TGG | 0.285623 | 8_1:-45065466 | None:intergenic |
| CAACAGGTGTATGATTTATT+GGG | 0.288556 | 8_1:+45070111 | Msa1196250:intron |
| CTTCAACGCTTTAACAAGTA+TGG | 0.307882 | 8_1:-45070196 | None:intergenic |
| AAGCGATCCTGAAAATTATC+AGG | 0.326328 | 8_1:+45069649 | Msa1196250:CDS |
| GTAGATAGCGTGGGGCGTTT+GGG | 0.339140 | 8_1:-45065465 | None:intergenic |
| GGAAAATATACCGATCTTAT+GGG | 0.409782 | 8_1:+45070132 | Msa1196250:CDS |
| CCCTCGGGTAATTAATTCTC+TGG | 0.410137 | 8_1:-45069699 | None:intergenic |
| ACCTCTCTGTGACTTTGTTA+AGG | 0.415223 | 8_1:-45068252 | None:intergenic |
| TCAGCAACATCATTATCTTT+GGG | 0.419923 | 8_1:-45065429 | None:intergenic |
| TTCATTAGGAATTTGTTTGT+CGG | 0.429830 | 8_1:+45067867 | Msa1196250:intron |
| CTTTCAGATAGGCGATTTGT+TGG | 0.434364 | 8_1:+45068589 | Msa1196250:intron |
| CATACTTGTTAAAGCGTTGA+AGG | 0.441585 | 8_1:+45070197 | Msa1196250:CDS |
| TTCCCATTCTGTAGCTATGT+AGG | 0.447539 | 8_1:-45068312 | None:intergenic |
| TTCTTGAAACAGAAATGAAA+AGG | 0.473442 | 8_1:+45065406 | None:intergenic |
| TCCCATTCTGTAGCTATGTA+GGG | 0.475220 | 8_1:-45068311 | None:intergenic |
| TTGTTTGTCGGATTGAGTAC+CGG | 0.482966 | 8_1:+45067879 | Msa1196250:CDS |
| GCGATCACCTTTCGTATCAA+TGG | 0.487977 | 8_1:-45068015 | None:intergenic |
| GTCCCTACATAGCTACAGAA+TGG | 0.496961 | 8_1:+45068309 | Msa1196250:CDS |
| TTTCAGATAGGCGATTTGTT+GGG | 0.503365 | 8_1:+45068590 | Msa1196250:intron |
| ATTCTCTGGCATAGATATGA+AGG | 0.508252 | 8_1:-45069685 | None:intergenic |
| TCCCTACATAGCTACAGAAT+GGG | 0.512003 | 8_1:+45068310 | Msa1196250:CDS |
| AAGGTAAGAAAATGCTTCAC+TGG | 0.513839 | 8_1:-45068233 | None:intergenic |
| AACAAAGTCACAGAGAGGTT+AGG | 0.530375 | 8_1:+45068256 | Msa1196250:CDS |
| ATCTTGTGTGGTAGATAGCG+TGG | 0.538989 | 8_1:-45065475 | None:intergenic |
| CAATAATTGTAATTCCCCTC+GGG | 0.543875 | 8_1:-45069714 | None:intergenic |
| TCTTGTGTGGTAGATAGCGT+GGG | 0.546750 | 8_1:-45065474 | None:intergenic |
| TGTTTGTCGGATTGAGTACC+GGG | 0.546928 | 8_1:+45067880 | Msa1196250:CDS |
| CCAATAATTGTAATTCCCCT+CGG | 0.549434 | 8_1:-45069715 | None:intergenic |
| GGGAAAACATTCCGATCTTG+TGG | 0.549779 | 8_1:+45068610 | Msa1196250:CDS |
| ATTAAATCCCTCCACAAGAT+CGG | 0.550656 | 8_1:-45068621 | None:intergenic |
| ATGATCACCTTGAAAATCGT+TGG | 0.554360 | 8_1:-45067907 | None:intergenic |
| ATTAAATTCGCCCATAAGAT+CGG | 0.555210 | 8_1:-45070142 | None:intergenic |
| TTGACACAATGTGAATCCAA+TGG | 0.569616 | 8_1:+45068650 | Msa1196250:CDS |
| CTTGATCCAGAATTTAACAA+AGG | 0.573154 | 8_1:+45067948 | Msa1196250:CDS |
| AAGAAGTGTCATAAAGGTGA+AGG | 0.589835 | 8_1:+45068113 | Msa1196250:CDS |
| AAACATTCCGATCTTGTGGA+GGG | 0.601247 | 8_1:+45068614 | Msa1196250:CDS |
| CCAGAGAATTAATTACCCGA+GGG | 0.604314 | 8_1:+45069699 | Msa1196250:CDS |
| CAAAGGTTTGATAAGTGCAG+AGG | 0.606415 | 8_1:+45067965 | Msa1196250:CDS |
| ATACTTGTTAAAGCGTTGAA+GGG | 0.606596 | 8_1:+45070198 | Msa1196250:CDS |
| AAAACATTCCGATCTTGTGG+AGG | 0.609107 | 8_1:+45068613 | Msa1196250:CDS |
| GATCAGGATGTTCGACAATG+AGG | 0.613657 | 8_1:-45068040 | None:intergenic |
| ATAAGTGCAGAGGTGTCTGA+TGG | 0.613968 | 8_1:+45067975 | Msa1196250:CDS |
| AAGACAAGAACTACAAACAA+TGG | 0.616882 | 8_1:+45068342 | Msa1196250:CDS |
| GCCAGAGAATTAATTACCCG+AGG | 0.623901 | 8_1:+45069698 | Msa1196250:CDS |
| TGTCGGATTGAGTACCGGGA+AGG | 0.635378 | 8_1:+45067884 | Msa1196250:CDS |
| CTTGTGTGGTAGATAGCGTG+GGG | 0.690663 | 8_1:-45065473 | None:intergenic |
| ACCTTAACAAAGTCACAGAG+AGG | 0.697804 | 8_1:+45068251 | Msa1196250:CDS |
| CAGAGAATTAATTACCCGAG+GGG | 0.717534 | 8_1:+45069700 | Msa1196250:CDS |
| GACATGACCATTGATACGAA+AGG | 0.722401 | 8_1:+45068008 | Msa1196250:CDS |
| AGAGAGGTTAGGAATGCACG+AGG | 0.754697 | 8_1:+45068267 | Msa1196250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAAGATTTTATATAATTA+GGG | - | chr8_1:45065705-45065724 | None:intergenic | 10.0% |
| !!! | ATTGAAGATTTTATATAATT+AGG | - | chr8_1:45065706-45065725 | None:intergenic | 10.0% |
| !!! | TTATATTTTCATATTCAAAA+TGG | - | chr8_1:45066394-45066413 | None:intergenic | 10.0% |
| !!! | AAATTTCAAATTTTATGAAT+GGG | - | chr8_1:45066603-45066622 | None:intergenic | 10.0% |
| !!! | AAAATTTCAAATTTTATGAA+TGG | - | chr8_1:45066604-45066623 | None:intergenic | 10.0% |
| !!! | GAAAATTTCTTTTTTATTTT+TGG | - | chr8_1:45067154-45067173 | None:intergenic | 10.0% |
| !! | TTAAATAAAAGTAAGTTATA+TGG | + | chr8_1:45068778-45068797 | Msa1196250:intron | 10.0% |
| !!! | ACTTTTTTTTATTTATTTTG+AGG | + | chr8_1:45068971-45068990 | Msa1196250:intron | 10.0% |
| !! | AAAAAAAAATGTATTATGTA+TGG | - | chr8_1:45069118-45069137 | None:intergenic | 10.0% |
| !!! | TATAACCTTTTTTAATTAAT+AGG | - | chr8_1:45069800-45069819 | None:intergenic | 10.0% |
| !! | ATTAATTAAAAAAGGTTATA+TGG | + | chr8_1:45069800-45069819 | Msa1196250:intron | 10.0% |
| !!! | ATTTCGTTTTATATTAATTC+TGG | + | chr8_1:45065551-45065570 | Msa1196250:intron | 15.0% |
| !! | AATAATGAAGAATAATTGTA+CGG | + | chr8_1:45066172-45066191 | Msa1196250:intron | 15.0% |
| !! | TGAATATGAAAATATAATCA+AGG | + | chr8_1:45066397-45066416 | Msa1196250:intron | 15.0% |
| !!! | CATTTTAAACTATTTTTGAA+AGG | - | chr8_1:45066556-45066575 | None:intergenic | 15.0% |
| !!! | AAAATTTGAAATTTTGAAAG+TGG | + | chr8_1:45066609-45066628 | Msa1196250:intron | 15.0% |
| !!! | AAATTTGAAATTTGTAATAC+TGG | + | chr8_1:45066681-45066700 | Msa1196250:intron | 15.0% |
| !! | CTTAGAATTATCATAATAAA+CGG | - | chr8_1:45067203-45067222 | None:intergenic | 15.0% |
| !! | TATTTAAGTGAATTCTAATT+AGG | + | chr8_1:45067485-45067504 | Msa1196250:intron | 15.0% |
| !! | TATTTAGTGATAAATAAATG+CGG | + | chr8_1:45067544-45067563 | Msa1196250:intron | 15.0% |
| !! | AAATTAAATTCAAGAGTTAT+AGG | - | chr8_1:45068424-45068443 | None:intergenic | 15.0% |
| !! | TATAACTCTTGAATTTAATT+TGG | + | chr8_1:45068423-45068442 | Msa1196250:intron | 15.0% |
| !!! | TTTTACAATTTTTTATTCAC+AGG | - | chr8_1:45068915-45068934 | None:intergenic | 15.0% |
| !! | ACTAACCTATTAATTAAAAA+AGG | + | chr8_1:45069792-45069811 | Msa1196250:intron | 15.0% |
| !!! | GACATTTTAGGATTTTTTTA+AGG | + | chr8_1:45065780-45065799 | Msa1196250:intron | 20.0% |
| !!! | TAAGGTTCTTATTATTTTTC+TGG | + | chr8_1:45065822-45065841 | Msa1196250:intron | 20.0% |
| !! | TAAAAAATATTCTATCGTAG+TGG | - | chr8_1:45065982-45066001 | None:intergenic | 20.0% |
| !!! | TTTGTGAGAATTTTAACATA+GGG | - | chr8_1:45066083-45066102 | None:intergenic | 20.0% |
| !!! | ATTTTCATCATTGTTTCTTA+AGG | - | chr8_1:45066142-45066161 | None:intergenic | 20.0% |
| !! | TTGAATCAGCAAATATTATT+AGG | - | chr8_1:45066339-45066358 | None:intergenic | 20.0% |
| !!! | GATCTGAAATATATTTATAG+AGG | + | chr8_1:45066501-45066520 | Msa1196250:intron | 20.0% |
| !!! | CATTTTTAAGCATATGTAAT+CGG | - | chr8_1:45066732-45066751 | None:intergenic | 20.0% |
| !!! | AGACTTTTAGATTATATTGT+GGG | - | chr8_1:45066900-45066919 | None:intergenic | 20.0% |
| !!! | AAGACTTTTAGATTATATTG+TGG | - | chr8_1:45066901-45066920 | None:intergenic | 20.0% |
| !! | ATTTAGTGATAAATAAATGC+GGG | + | chr8_1:45067545-45067564 | Msa1196250:intron | 20.0% |
| !! | AACTATTGTAGCAATTAATA+AGG | + | chr8_1:45067580-45067599 | Msa1196250:intron | 20.0% |
| !! | ACTATTGTAGCAATTAATAA+GGG | + | chr8_1:45067581-45067600 | Msa1196250:intron | 20.0% |
| !! | AGAACATACTAATTATAATG+AGG | - | chr8_1:45067729-45067748 | None:intergenic | 20.0% |
| !!! | CTTTTAAATGCTTTTTCATT+AGG | + | chr8_1:45067853-45067872 | Msa1196250:intron | 20.0% |
| !!! | AAATGTAACTTCTGAAAATT+TGG | - | chr8_1:45068383-45068402 | None:intergenic | 20.0% |
| !!! | ATTTTCAGAAGTTACATTTT+TGG | + | chr8_1:45068384-45068403 | Msa1196250:intron | 20.0% |
| !!! | ATTTTGTTGAAGATAATCAA+CGG | + | chr8_1:45068517-45068536 | Msa1196250:intron | 20.0% |
| !! | CTTAACAATTATATAGAGTA+TGG | - | chr8_1:45068554-45068573 | None:intergenic | 20.0% |
| !! | ATTAGTTGTAAAATTACCAT+TGG | - | chr8_1:45068669-45068688 | None:intergenic | 20.0% |
| !!! | TACATTTTTTTTTGCATGAT+AGG | + | chr8_1:45069125-45069144 | Msa1196250:intron | 20.0% |
| !!! | ATTTCTCTTATAGTTTTTCT+TGG | - | chr8_1:45069333-45069352 | None:intergenic | 20.0% |
| !! | TGATATATGATAGAACATTA+TGG | + | chr8_1:45069394-45069413 | Msa1196250:intron | 20.0% |
| !!! | ATCACATATTCAATTTGTTT+TGG | + | chr8_1:45069505-45069524 | Msa1196250:intron | 20.0% |
| !!! | TCACATATTCAATTTGTTTT+GGG | + | chr8_1:45069506-45069525 | Msa1196250:intron | 20.0% |
| !!! | ATTTTTCTTTGACTTTTTCA+AGG | - | chr8_1:45069628-45069647 | None:intergenic | 20.0% |
| !!! | AAAAAATCCTGATAATTTTC+AGG | - | chr8_1:45069659-45069678 | None:intergenic | 20.0% |
| !! | TTAAAAAAGGTTATATGGTA+AGG | + | chr8_1:45069805-45069824 | Msa1196250:intron | 20.0% |
| !! | TTTAACTAGACTAAAATGTA+TGG | - | chr8_1:45070030-45070049 | None:intergenic | 20.0% |
| !!! | TTTTAGGATTTTTTTAAGGC+AGG | + | chr8_1:45065784-45065803 | Msa1196250:intron | 25.0% |
| !!! | AGGTTATTTTTGTGAGTTTA+AGG | + | chr8_1:45065804-45065823 | Msa1196250:intron | 25.0% |
| ! | ATGGACACAAGAATTTATAA+TGG | + | chr8_1:45065903-45065922 | Msa1196250:intron | 25.0% |
| ! | GTGCTATAGAAATATTGTTA+GGG | - | chr8_1:45066027-45066046 | None:intergenic | 25.0% |
| !! | ATTCTTGTTGTAAAGATAGT+GGG | - | chr8_1:45066050-45066069 | None:intergenic | 25.0% |
| !!! | GTTTGTGAGAATTTTAACAT+AGG | - | chr8_1:45066084-45066103 | None:intergenic | 25.0% |
| ! | TATCACTCTCAAATGAATAT+AGG | + | chr8_1:45066210-45066229 | Msa1196250:intron | 25.0% |
| ! | ATAATCAAGGTTTCACAAAA+TGG | + | chr8_1:45066410-45066429 | Msa1196250:intron | 25.0% |
| ! | GAAAAGACACAAATTTGAAA+TGG | + | chr8_1:45066575-45066594 | Msa1196250:intron | 25.0% |
| ! | AAATTTGTAATACTGGTAAC+TGG | + | chr8_1:45066688-45066707 | Msa1196250:intron | 25.0% |
| ! | GAAAAGAAGAAAAACTATTG+AGG | - | chr8_1:45066950-45066969 | None:intergenic | 25.0% |
| !! | TAGTTTTTCTTCTTTTCTGA+CGG | + | chr8_1:45066953-45066972 | Msa1196250:intron | 25.0% |
| !! | TTTTCACTATCCAAAATTCT+TGG | + | chr8_1:45067169-45067188 | Msa1196250:intron | 25.0% |
| ! | AGAATTATCATAATAAACGG+TGG | - | chr8_1:45067200-45067219 | None:intergenic | 25.0% |
| ! | TCGTAATTGTTTAAAGAAAG+AGG | - | chr8_1:45067350-45067369 | None:intergenic | 25.0% |
| ! | TAAACAATTACGATCTACAA+CGG | + | chr8_1:45067357-45067376 | Msa1196250:intron | 25.0% |
| ! | CAATAAAAGGAGAAATACAA+AGG | - | chr8_1:45067432-45067451 | None:intergenic | 25.0% |
| ! | TAACTTTAATGAGTTACACT+TGG | + | chr8_1:45067689-45067708 | Msa1196250:intron | 25.0% |
| ! | AATGTTGAATTCAGCTAAAA+GGG | - | chr8_1:45067799-45067818 | None:intergenic | 25.0% |
| !! | TTCATTAGGAATTTGTTTGT+CGG | + | chr8_1:45067867-45067886 | Msa1196250:intron | 25.0% |
| ! | ATCAAACCTTTGTTAAATTC+TGG | - | chr8_1:45067957-45067976 | None:intergenic | 25.0% |
| !! | ATCAAACCTTTGTCAATTTT+TGG | - | chr8_1:45068065-45068084 | None:intergenic | 25.0% |
| !!! | GAAAAAAAGAAGTGTCATAA+AGG | + | chr8_1:45068107-45068126 | Msa1196250:CDS | 25.0% |
| ! | AATGTCTTAATCTTTCAGAT+AGG | + | chr8_1:45068578-45068597 | Msa1196250:intron | 25.0% |
| ! | ATACATGTAGATTATGTAGT+AGG | + | chr8_1:45069255-45069274 | Msa1196250:intron | 25.0% |
| ! | TACATGTAGATTATGTAGTA+GGG | + | chr8_1:45069256-45069275 | Msa1196250:intron | 25.0% |
| ! | ACAAATATCTAGAGATTAAC+AGG | + | chr8_1:45069358-45069377 | Msa1196250:intron | 25.0% |
| !!! | CACATATTCAATTTGTTTTG+GGG | + | chr8_1:45069507-45069526 | Msa1196250:intron | 25.0% |
| ! | AGTTACAAATGAATCATAGA+GGG | - | chr8_1:45069558-45069577 | None:intergenic | 25.0% |
| ! | AAGTTACAAATGAATCATAG+AGG | - | chr8_1:45069559-45069578 | None:intergenic | 25.0% |
| !!! | TTAAAAAGTTTTGTTGTCTC+AGG | + | chr8_1:45069578-45069597 | Msa1196250:intron | 25.0% |
| ! | ATTAATAGGTTAGTGTTCAA+TGG | - | chr8_1:45069786-45069805 | None:intergenic | 25.0% |
| !! | TATATTTTGTTCAAGAACTG+AGG | + | chr8_1:45069969-45069988 | Msa1196250:intron | 25.0% |
| ! | TCTAAGTAGTTGCTAATATA+TGG | + | chr8_1:45070070-45070089 | Msa1196250:intron | 25.0% |
| !!! | GCTTATTTTATATTTCCAAC+AGG | + | chr8_1:45070095-45070114 | Msa1196250:intron | 25.0% |
| TCAGCAACATCATTATCTTT+GGG | - | chr8_1:45065432-45065451 | None:intergenic | 30.0% | |
| AAAAACTTACGAATCTTGTG+TGG | - | chr8_1:45065490-45065509 | None:intergenic | 30.0% | |
| ! | ATTAGGTTTTCGGACATTTT+AGG | + | chr8_1:45065768-45065787 | Msa1196250:intron | 30.0% |
| ! | ATGCGAAAAATAAAGAGTGT+AGG | + | chr8_1:45065870-45065889 | Msa1196250:intron | 30.0% |
| ! | TGCGAAAAATAAAGAGTGTA+GGG | + | chr8_1:45065871-45065890 | Msa1196250:intron | 30.0% |
| ! | GGTGCTATAGAAATATTGTT+AGG | - | chr8_1:45066028-45066047 | None:intergenic | 30.0% |
| ! | TTCTTGTTGTAAAGATAGTG+GGG | - | chr8_1:45066049-45066068 | None:intergenic | 30.0% |
| ! | GATTCTTGTTGTAAAGATAG+TGG | - | chr8_1:45066051-45066070 | None:intergenic | 30.0% |
| GATTCTTGTTAAAGACAGTA+GGG | - | chr8_1:45066120-45066139 | None:intergenic | 30.0% | |
| ! | AGGAAAAAGAGTACAAGATA+GGG | - | chr8_1:45066281-45066300 | None:intergenic | 30.0% |
| TCAGCAAATATTATTAGGCT+AGG | - | chr8_1:45066334-45066353 | None:intergenic | 30.0% | |
| !! | GAAATTTTGAAAGTGGTAAC+CGG | + | chr8_1:45066616-45066635 | Msa1196250:intron | 30.0% |
| TAACAAATTACACCCCTATA+TGG | - | chr8_1:45066645-45066664 | None:intergenic | 30.0% | |
| GTAATCGGATACACATTATA+TGG | - | chr8_1:45066717-45066736 | None:intergenic | 30.0% | |
| ATCTTCATCTTAATTTCCTC+TGG | + | chr8_1:45066922-45066941 | Msa1196250:intron | 30.0% | |
| ! | AGTTTTTCTTCTTTTCTGAC+GGG | + | chr8_1:45066954-45066973 | Msa1196250:intron | 30.0% |
| GAATATTTCCTTCTTAGACT+CGG | - | chr8_1:45067003-45067022 | None:intergenic | 30.0% | |
| ACGAATCTAAGTTCTATTCT+TGG | + | chr8_1:45067062-45067081 | Msa1196250:intron | 30.0% | |
| ATCTAAGTTCTATTCTTGGA+TGG | + | chr8_1:45067066-45067085 | Msa1196250:intron | 30.0% | |
| TCTTCAATTCTTAGTCAAAG+GGG | - | chr8_1:45067126-45067145 | None:intergenic | 30.0% | |
| CTCTTCAATTCTTAGTCAAA+GGG | - | chr8_1:45067127-45067146 | None:intergenic | 30.0% | |
| ACTCTTCAATTCTTAGTCAA+AGG | - | chr8_1:45067128-45067147 | None:intergenic | 30.0% | |
| ! | ATTCTAAGAGAACTTCTATG+TGG | + | chr8_1:45067215-45067234 | Msa1196250:intron | 30.0% |
| ATAAACCCAGTCAAAACAAT+TGG | + | chr8_1:45067388-45067407 | Msa1196250:intron | 30.0% | |
| CAAAGGAAGAGAATGAATTA+TGG | - | chr8_1:45067415-45067434 | None:intergenic | 30.0% | |
| CTACGTTAGTTGACAATAAA+AGG | - | chr8_1:45067445-45067464 | None:intergenic | 30.0% | |
| CAATGTTGAATTCAGCTAAA+AGG | - | chr8_1:45067800-45067819 | None:intergenic | 30.0% | |
| GCTGAATTCAACATTGATAA+TGG | + | chr8_1:45067804-45067823 | Msa1196250:intron | 30.0% | |
| CTTGATCCAGAATTTAACAA+AGG | + | chr8_1:45067948-45067967 | Msa1196250:CDS | 30.0% | |
| AAGACAAGAACTACAAACAA+TGG | + | chr8_1:45068342-45068361 | Msa1196250:CDS | 30.0% | |
| !!! | ATAAAGTGTTGTTTTGCAGA+AGG | + | chr8_1:45068739-45068758 | Msa1196250:intron | 30.0% |
| !!! | TCTTTTTTTGCCACTTATCA+TGG | + | chr8_1:45069041-45069060 | Msa1196250:intron | 30.0% |
| !!! | CTTTTTTTGCCACTTATCAT+GGG | + | chr8_1:45069042-45069061 | Msa1196250:intron | 30.0% |
| ! | AAAACTTTTCCCATGATAAG+TGG | - | chr8_1:45069054-45069073 | None:intergenic | 30.0% |
| GAGTGTAGTAAAATCAATAG+AGG | + | chr8_1:45069299-45069318 | Msa1196250:intron | 30.0% | |
| ATATCTAGAGATTAACAGGT+TGG | + | chr8_1:45069362-45069381 | Msa1196250:intron | 30.0% | |
| !!! | TCTTTGACTTTTTCAAGGAA+GGG | - | chr8_1:45069623-45069642 | None:intergenic | 30.0% |
| !!! | TTCTTTGACTTTTTCAAGGA+AGG | - | chr8_1:45069624-45069643 | None:intergenic | 30.0% |
| GGGAATTACAATTATTGGTA+TGG | + | chr8_1:45069720-45069739 | Msa1196250:intron | 30.0% | |
| AATATAAACTGTCCTTCATG+AGG | + | chr8_1:45069891-45069910 | Msa1196250:intron | 30.0% | |
| CAACAGGTGTATGATTTATT+GGG | + | chr8_1:45070111-45070130 | Msa1196250:intron | 30.0% | |
| GGAAAATATACCGATCTTAT+GGG | + | chr8_1:45070132-45070151 | Msa1196250:CDS | 30.0% | |
| ATTAAATTCGCCCATAAGAT+CGG | - | chr8_1:45070145-45070164 | None:intergenic | 30.0% | |
| !! | ATACTTGTTAAAGCGTTGAA+GGG | + | chr8_1:45070198-45070217 | Msa1196250:CDS | 30.0% |
| GTCAGCAACATCATTATCTT+TGG | - | chr8_1:45065433-45065452 | None:intergenic | 35.0% | |
| AATGGTTCCCTTCTAAACTA+AGG | + | chr8_1:45065921-45065940 | Msa1196250:intron | 35.0% | |
| ATGGTTCCCTTCTAAACTAA+GGG | + | chr8_1:45065922-45065941 | Msa1196250:intron | 35.0% | |
| GATTTGCCCTTAGTTTAGAA+GGG | - | chr8_1:45065931-45065950 | None:intergenic | 35.0% | |
| TTACAAGAAAACTTACCCCA+AGG | + | chr8_1:45065999-45066018 | Msa1196250:intron | 35.0% | |
| AAATATTGTTAGGGAGCCTT+GGG | - | chr8_1:45066018-45066037 | None:intergenic | 35.0% | |
| GGATTCTTGTTAAAGACAGT+AGG | - | chr8_1:45066121-45066140 | None:intergenic | 35.0% | |
| CACTCTCAAATGAATATAGG+AGG | + | chr8_1:45066213-45066232 | Msa1196250:intron | 35.0% | |
| !!! | GGTTTTTTAGTGAGCTTGAT+TGG | + | chr8_1:45066234-45066253 | Msa1196250:intron | 35.0% |
| ! | GGAAAAAGAGTACAAGATAG+GGG | - | chr8_1:45066280-45066299 | None:intergenic | 35.0% |
| ! | GAGGAAAAAGAGTACAAGAT+AGG | - | chr8_1:45066282-45066301 | None:intergenic | 35.0% |
| AAGATGTATTAAACCTGCGA+AGG | - | chr8_1:45066304-45066323 | None:intergenic | 35.0% | |
| TTCTTAGACATTGCTTCACA+TGG | + | chr8_1:45066765-45066784 | Msa1196250:intron | 35.0% | |
| TCTTAGACATTGCTTCACAT+GGG | + | chr8_1:45066766-45066785 | Msa1196250:intron | 35.0% | |
| TGTGGGAATCATTGTAAGTA+TGG | - | chr8_1:45066883-45066902 | None:intergenic | 35.0% | |
| ! | GTTTTTCTTCTTTTCTGACG+GGG | + | chr8_1:45066955-45066974 | Msa1196250:intron | 35.0% |
| ! | TTTTTCTTCTTTTCTGACGG+GGG | + | chr8_1:45066956-45066975 | Msa1196250:intron | 35.0% |
| CACAAACAATTGAGTTCAAG+TGG | + | chr8_1:45067027-45067046 | Msa1196250:intron | 35.0% | |
| CTTCAATTCTTAGTCAAAGG+GGG | - | chr8_1:45067125-45067144 | None:intergenic | 35.0% | |
| AATTACGATCTACAACGGTT+TGG | + | chr8_1:45067362-45067381 | Msa1196250:intron | 35.0% | |
| !!! | ATGGTCCAATTGTTTTGACT+GGG | - | chr8_1:45067396-45067415 | None:intergenic | 35.0% |
| !!! | TATGGTCCAATTGTTTTGAC+TGG | - | chr8_1:45067397-45067416 | None:intergenic | 35.0% |
| TAATAAGGGATGCGCAAAAT+AGG | + | chr8_1:45067595-45067614 | Msa1196250:intron | 35.0% | |
| ATGATCACCTTGAAAATCGT+TGG | - | chr8_1:45067910-45067929 | None:intergenic | 35.0% | |
| !! | CCTTTGTCAATTTTTGGATC+AGG | - | chr8_1:45068059-45068078 | None:intergenic | 35.0% |
| CCTGATCCAAAAATTGACAA+AGG | + | chr8_1:45068056-45068075 | Msa1196250:CDS | 35.0% | |
| !! | AAGAAGTGTCATAAAGGTGA+AGG | + | chr8_1:45068113-45068132 | Msa1196250:CDS | 35.0% |
| TGTTGCATGATGAAGATTAC+AGG | + | chr8_1:45068142-45068161 | Msa1196250:intron | 35.0% | |
| AAGGTAAGAAAATGCTTCAC+TGG | - | chr8_1:45068236-45068255 | None:intergenic | 35.0% | |
| ! | GTAGGGACTTCTCAAATTTT+TGG | - | chr8_1:45068297-45068316 | None:intergenic | 35.0% |
| ! | TTTCAGATAGGCGATTTGTT+GGG | + | chr8_1:45068590-45068609 | Msa1196250:intron | 35.0% |
| ATTAAATCCCTCCACAAGAT+CGG | - | chr8_1:45068624-45068643 | None:intergenic | 35.0% | |
| TTGACACAATGTGAATCCAA+TGG | + | chr8_1:45068650-45068669 | Msa1196250:CDS | 35.0% | |
| !! | TTTTGCGTCGCTTTATCTTT+AGG | + | chr8_1:45068816-45068835 | Msa1196250:intron | 35.0% |
| AGAGAAGATAAAGAGAGAGT+CGG | + | chr8_1:45069168-45069187 | Msa1196250:intron | 35.0% | |
| AGAACCTATCACGGAAAATA+TGG | + | chr8_1:45069194-45069213 | Msa1196250:intron | 35.0% | |
| ! | ATAGGTGGTTTGGAAATGTA+TGG | + | chr8_1:45069229-45069248 | Msa1196250:intron | 35.0% |
| AAGCGATCCTGAAAATTATC+AGG | + | chr8_1:45069649-45069668 | Msa1196250:CDS | 35.0% | |
| ATTCTCTGGCATAGATATGA+AGG | - | chr8_1:45069688-45069707 | None:intergenic | 35.0% | |
| CAATAATTGTAATTCCCCTC+GGG | - | chr8_1:45069717-45069736 | None:intergenic | 35.0% | |
| CCAATAATTGTAATTCCCCT+CGG | - | chr8_1:45069718-45069737 | None:intergenic | 35.0% | |
| ! | ACCTGAAGAAAAAGAAGTGT+TGG | + | chr8_1:45069917-45069936 | Msa1196250:intron | 35.0% |
| ! | TCCAACACTTCTTTTTCTTC+AGG | - | chr8_1:45069921-45069940 | None:intergenic | 35.0% |
| GTTTACACTCCATTCAGTTT+AGG | + | chr8_1:45069991-45070010 | Msa1196250:intron | 35.0% | |
| CAATCAGATCCTAAACTGAA+TGG | - | chr8_1:45070003-45070022 | None:intergenic | 35.0% | |
| CCAATAAATCATACACCTGT+TGG | - | chr8_1:45070113-45070132 | None:intergenic | 35.0% | |
| CCAACAGGTGTATGATTTAT+TGG | + | chr8_1:45070110-45070129 | Msa1196250:intron | 35.0% | |
| GGGAAAATATACCGATCTTA+TGG | + | chr8_1:45070131-45070150 | Msa1196250:CDS | 35.0% | |
| CTTCAACGCTTTAACAAGTA+TGG | - | chr8_1:45070199-45070218 | None:intergenic | 35.0% | |
| !! | CATACTTGTTAAAGCGTTGA+AGG | + | chr8_1:45070197-45070216 | Msa1196250:CDS | 35.0% |
| ATAAGTTCAGAGTGCAACCT+AGG | + | chr8_1:45065738-45065757 | Msa1196250:intron | 40.0% | |
| TAAGTTCAGAGTGCAACCTA+GGG | + | chr8_1:45065739-45065758 | Msa1196250:intron | 40.0% | |
| AAAACCTAATTCACCTCCCT+AGG | - | chr8_1:45065758-45065777 | None:intergenic | 40.0% | |
| ! | AGGGAGGTGAATTAGGTTTT+CGG | + | chr8_1:45065758-45065777 | Msa1196250:intron | 40.0% |
| GAGTGTAGGGAAGAGAAAAA+TGG | + | chr8_1:45065884-45065903 | Msa1196250:intron | 40.0% | |
| GGATTTGCCCTTAGTTTAGA+AGG | - | chr8_1:45065932-45065951 | None:intergenic | 40.0% | |
| ! | ATCGTAGTGGAATTCCTTCA+CGG | - | chr8_1:45065969-45065988 | None:intergenic | 40.0% |
| AATATTGTTAGGGAGCCTTG+GGG | - | chr8_1:45066017-45066036 | None:intergenic | 40.0% | |
| GAAATATTGTTAGGGAGCCT+TGG | - | chr8_1:45066019-45066038 | None:intergenic | 40.0% | |
| ! | TAGTGAGCTTGATTGGTGTT+TGG | + | chr8_1:45066241-45066260 | Msa1196250:intron | 40.0% |
| ! | AGTGAGCTTGATTGGTGTTT+GGG | + | chr8_1:45066242-45066261 | Msa1196250:intron | 40.0% |
| ATGTATTAAACCTGCGAAGG+AGG | - | chr8_1:45066301-45066320 | None:intergenic | 40.0% | |
| TGAAAGGTAGCATTGCTTCA+TGG | - | chr8_1:45066540-45066559 | None:intergenic | 40.0% | |
| TGGTAACCGGTTACCATATA+GGG | + | chr8_1:45066629-45066648 | Msa1196250:intron | 40.0% | |
| TTACACCCCTATATGGTAAC+CGG | - | chr8_1:45066638-45066657 | None:intergenic | 40.0% | |
| CTTAGACATTGCTTCACATG+GGG | + | chr8_1:45066767-45066786 | Msa1196250:intron | 40.0% | |
| ! | AAAAACTATTGAGGCACCAG+AGG | - | chr8_1:45066941-45066960 | None:intergenic | 40.0% |
| AAACTCAACCGAGTCTAAGA+AGG | + | chr8_1:45066992-45067011 | Msa1196250:intron | 40.0% | |
| AACAATCACTTGTCGAACTC+CGG | + | chr8_1:45067089-45067108 | Msa1196250:intron | 40.0% | |
| ! | GGTGGAAACACCAAGAATTT+TGG | - | chr8_1:45067182-45067201 | None:intergenic | 40.0% |
| CGACTTAGCTCAATTACATG+TGG | + | chr8_1:45067256-45067275 | Msa1196250:intron | 40.0% | |
| TTGTTTGTCGGATTGAGTAC+CGG | + | chr8_1:45067879-45067898 | Msa1196250:CDS | 40.0% | |
| CAAAGGTTTGATAAGTGCAG+AGG | + | chr8_1:45067965-45067984 | Msa1196250:CDS | 40.0% | |
| GACATGACCATTGATACGAA+AGG | + | chr8_1:45068008-45068027 | Msa1196250:CDS | 40.0% | |
| ACCTTAACAAAGTCACAGAG+AGG | + | chr8_1:45068251-45068270 | Msa1196250:CDS | 40.0% | |
| ACCTCTCTGTGACTTTGTTA+AGG | - | chr8_1:45068255-45068274 | None:intergenic | 40.0% | |
| AACAAAGTCACAGAGAGGTT+AGG | + | chr8_1:45068256-45068275 | Msa1196250:CDS | 40.0% | |
| TCCCTACATAGCTACAGAAT+GGG | + | chr8_1:45068310-45068329 | Msa1196250:CDS | 40.0% | |
| TCCCATTCTGTAGCTATGTA+GGG | - | chr8_1:45068314-45068333 | None:intergenic | 40.0% | |
| TTCCCATTCTGTAGCTATGT+AGG | - | chr8_1:45068315-45068334 | None:intergenic | 40.0% | |
| CTTTCAGATAGGCGATTTGT+TGG | + | chr8_1:45068589-45068608 | Msa1196250:intron | 40.0% | |
| AAAACATTCCGATCTTGTGG+AGG | + | chr8_1:45068613-45068632 | Msa1196250:CDS | 40.0% | |
| AAACATTCCGATCTTGTGGA+GGG | + | chr8_1:45068614-45068633 | Msa1196250:CDS | 40.0% | |
| GCCTCTCTATTGAGAAATGA+TGG | + | chr8_1:45069085-45069104 | Msa1196250:intron | 40.0% | |
| GCCATCATTTCTCAATAGAG+AGG | - | chr8_1:45069089-45069108 | None:intergenic | 40.0% | |
| ! | TATTGAGAAATGATGGCGCT+AGG | + | chr8_1:45069092-45069111 | Msa1196250:intron | 40.0% |
| GAGAAGATAAAGAGAGAGTC+GGG | + | chr8_1:45069169-45069188 | Msa1196250:intron | 40.0% | |
| AGAAGATAAAGAGAGAGTCG+GGG | + | chr8_1:45069170-45069189 | Msa1196250:intron | 40.0% | |
| ACCTATCACGGAAAATATGG+TGG | + | chr8_1:45069197-45069216 | Msa1196250:intron | 40.0% | |
| ! | ACCACCATATTTTCCGTGAT+AGG | - | chr8_1:45069201-45069220 | None:intergenic | 40.0% |
| ATATGGTGGTAACTCGACAT+AGG | + | chr8_1:45069211-45069230 | Msa1196250:intron | 40.0% | |
| CCAGAGAATTAATTACCCGA+GGG | + | chr8_1:45069699-45069718 | Msa1196250:CDS | 40.0% | |
| CAGAGAATTAATTACCCGAG+GGG | + | chr8_1:45069700-45069719 | Msa1196250:CDS | 40.0% | |
| CCGAGGGGAATTACAATTAT+TGG | + | chr8_1:45069715-45069734 | Msa1196250:CDS | 40.0% | |
| !! | TCTTCAGGTTTTCCTCATGA+AGG | - | chr8_1:45069906-45069925 | None:intergenic | 40.0% |
| TCTTGTGTGGTAGATAGCGT+GGG | - | chr8_1:45065477-45065496 | None:intergenic | 45.0% | |
| ATCTTGTGTGGTAGATAGCG+TGG | - | chr8_1:45065478-45065497 | None:intergenic | 45.0% | |
| ! | TCGTAGTGGAATTCCTTCAC+GGG | - | chr8_1:45065968-45065987 | None:intergenic | 45.0% |
| ! | TACTCTTTTTCCTCCTTCGC+AGG | + | chr8_1:45066288-45066307 | Msa1196250:intron | 45.0% |
| GTGGTAACCGGTTACCATAT+AGG | + | chr8_1:45066628-45066647 | Msa1196250:intron | 45.0% | |
| GGTAACCGGTTACCATATAG+GGG | + | chr8_1:45066630-45066649 | Msa1196250:intron | 45.0% | |
| TTGTCGAACTCCGGATTACT+AGG | + | chr8_1:45067098-45067117 | Msa1196250:intron | 45.0% | |
| TGTCGAACTCCGGATTACTA+GGG | + | chr8_1:45067099-45067118 | Msa1196250:intron | 45.0% | |
| TGTTTGTCGGATTGAGTACC+GGG | + | chr8_1:45067880-45067899 | Msa1196250:CDS | 45.0% | |
| !! | TTGAAAATCGTTGGCCTTCC+CGG | - | chr8_1:45067901-45067920 | None:intergenic | 45.0% |
| !! | ATAAGTGCAGAGGTGTCTGA+TGG | + | chr8_1:45067975-45067994 | Msa1196250:CDS | 45.0% |
| GCGATCACCTTTCGTATCAA+TGG | - | chr8_1:45068018-45068037 | None:intergenic | 45.0% | |
| GATCAGGATGTTCGACAATG+AGG | - | chr8_1:45068043-45068062 | None:intergenic | 45.0% | |
| GTCCCTACATAGCTACAGAA+TGG | + | chr8_1:45068309-45068328 | Msa1196250:CDS | 45.0% | |
| GGGAAAACATTCCGATCTTG+TGG | + | chr8_1:45068610-45068629 | Msa1196250:CDS | 45.0% | |
| GTAACTCGACATAGGTGGTT+TGG | + | chr8_1:45069219-45069238 | Msa1196250:intron | 45.0% | |
| GCCAGAGAATTAATTACCCG+AGG | + | chr8_1:45069698-45069717 | Msa1196250:CDS | 45.0% | |
| CCCTCGGGTAATTAATTCTC+TGG | - | chr8_1:45069702-45069721 | None:intergenic | 45.0% | |
| !!! | TAAAAAAAAAAGTATTTTAA+CGG | + | chr8_1:45067316-45067335 | Msa1196250:intron | 5.0% |
| !! | TTTAATTAAATTATAATCAA+TGG | - | chr8_1:45067654-45067673 | None:intergenic | 5.0% |
| !! | ATTGATTATAATTTAATTAA+AGG | + | chr8_1:45067653-45067672 | Msa1196250:intron | 5.0% |
| !! | TTATTAGAAATAATAATAAA+GGG | - | chr8_1:45068723-45068742 | None:intergenic | 5.0% |
| !! | TTTATTAGAAATAATAATAA+AGG | - | chr8_1:45068724-45068743 | None:intergenic | 5.0% |
| CTTGTGTGGTAGATAGCGTG+GGG | - | chr8_1:45065476-45065495 | None:intergenic | 50.0% | |
| GCAACCTAGGGAGGTGAATT+AGG | + | chr8_1:45065751-45065770 | Msa1196250:intron | 50.0% | |
| ! | CGTAGTGGAATTCCTTCACG+GGG | - | chr8_1:45065967-45065986 | None:intergenic | 50.0% |
| ! | GGGAAGGCCAACGATTTTCA+AGG | + | chr8_1:45067900-45067919 | Msa1196250:CDS | 50.0% |
| AGAGAGGTTAGGAATGCACG+AGG | + | chr8_1:45068267-45068286 | Msa1196250:CDS | 50.0% | |
| AGTCGGGGTAGAACCTATCA+CGG | + | chr8_1:45069185-45069204 | Msa1196250:intron | 50.0% | |
| TGGTGGTAACTCGACATAGG+TGG | + | chr8_1:45069214-45069233 | Msa1196250:intron | 50.0% | |
| ACTAAGTGGGGTCTGCTACA+TGG | - | chr8_1:45069431-45069450 | None:intergenic | 50.0% | |
| ATGTAGCAGACCCCACTTAG+TGG | + | chr8_1:45069430-45069449 | Msa1196250:intron | 50.0% | |
| TGTAGCAGACCCCACTTAGT+GGG | + | chr8_1:45069431-45069450 | Msa1196250:intron | 50.0% | |
| ! | GTAGATAGCGTGGGGCGTTT+GGG | - | chr8_1:45065468-45065487 | None:intergenic | 55.0% |
| GTTCAGAGTGCAACCTAGGG+AGG | + | chr8_1:45065742-45065761 | Msa1196250:intron | 55.0% | |
| ATTCCTTCACGGGGTGTGGA+GGG | - | chr8_1:45065958-45065977 | None:intergenic | 55.0% | |
| AATTCCTTCACGGGGTGTGG+AGG | - | chr8_1:45065959-45065978 | None:intergenic | 55.0% | |
| TGGAATTCCTTCACGGGGTG+TGG | - | chr8_1:45065962-45065981 | None:intergenic | 55.0% | |
| CAAAGGGGGCCCTAGTAATC+CGG | - | chr8_1:45067111-45067130 | None:intergenic | 55.0% | |
| !! | TGTCGGATTGAGTACCGGGA+AGG | + | chr8_1:45067884-45067903 | Msa1196250:CDS | 55.0% |
| AAGCCTCGTCCCACTAAGTG+GGG | - | chr8_1:45069443-45069462 | None:intergenic | 55.0% | |
| CAAGCCTCGTCCCACTAAGT+GGG | - | chr8_1:45069444-45069463 | None:intergenic | 55.0% | |
| ! | GGTAGATAGCGTGGGGCGTT+TGG | - | chr8_1:45065469-45065488 | None:intergenic | 60.0% |
| AGACCCCACTTAGTGGGACG+AGG | + | chr8_1:45069437-45069456 | Msa1196250:intron | 60.0% | |
| GCAAGCCTCGTCCCACTAAG+TGG | - | chr8_1:45069445-45069464 | None:intergenic | 60.0% | |
| TTCACGGGGTGTGGAGGGAG+TGG | - | chr8_1:45065953-45065972 | None:intergenic | 65.0% | |
| ACTCCCTCCACACCCCGTGA+AGG | + | chr8_1:45065952-45065971 | Msa1196250:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 45065420 | 45070245 | 45065420 | ID=Msa1196250;Name=Msa1196250 |
| chr8_1 | mRNA | 45065420 | 45070245 | 45065420 | ID=Msa1196250-mRNA-1;Parent=Msa1196250;Name=Msa1196250-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0|0|1|1|1|6|0|272 |
| chr8_1 | exon | 45065420 | 45065499 | 45065420 | ID=Msa1196250-mRNA-1:exon:14460;Parent=Msa1196250-mRNA-1 |
| chr8_1 | exon | 45067875 | 45068134 | 45067875 | ID=Msa1196250-mRNA-1:exon:14461;Parent=Msa1196250-mRNA-1 |
| chr8_1 | exon | 45068227 | 45068363 | 45068227 | ID=Msa1196250-mRNA-1:exon:14462;Parent=Msa1196250-mRNA-1 |
| chr8_1 | exon | 45068596 | 45068671 | 45068596 | ID=Msa1196250-mRNA-1:exon:14463;Parent=Msa1196250-mRNA-1 |
| chr8_1 | exon | 45069600 | 45069736 | 45069600 | ID=Msa1196250-mRNA-1:exon:14464;Parent=Msa1196250-mRNA-1 |
| chr8_1 | exon | 45070117 | 45070245 | 45070117 | ID=Msa1196250-mRNA-1:exon:14465;Parent=Msa1196250-mRNA-1 |
| chr8_1 | CDS | 45065420 | 45065499 | 45065420 | ID=Msa1196250-mRNA-1:cds;Parent=Msa1196250-mRNA-1 |
| chr8_1 | CDS | 45067875 | 45068134 | 45067875 | ID=Msa1196250-mRNA-1:cds;Parent=Msa1196250-mRNA-1 |
| chr8_1 | CDS | 45068227 | 45068363 | 45068227 | ID=Msa1196250-mRNA-1:cds;Parent=Msa1196250-mRNA-1 |
| chr8_1 | CDS | 45068596 | 45068671 | 45068596 | ID=Msa1196250-mRNA-1:cds;Parent=Msa1196250-mRNA-1 |
| chr8_1 | CDS | 45069600 | 45069736 | 45069600 | ID=Msa1196250-mRNA-1:cds;Parent=Msa1196250-mRNA-1 |
| chr8_1 | CDS | 45070117 | 45070245 | 45070117 | ID=Msa1196250-mRNA-1:cds;Parent=Msa1196250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
