AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1199400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1199400 MtrunA17_Chr8g0364791 85.560 464 43 5 1 460 1 444 0.0 783
Msa1199400 MtrunA17_Chr8g0384201 70.000 500 87 11 1 454 1 483 0.0 649
Msa1199400 MtrunA17_Chr3g0130101 63.830 235 79 3 1 229 1 235 8.32e-105 316
Msa1199400 MtrunA17_Chr1g0201021 54.857 175 79 0 7 181 20 194 6.20e-65 219
Msa1199400 MtrunA17_Chr1g0197361 55.233 172 71 3 8 176 10 178 7.61e-65 219
Msa1199400 MtrunA17_Chr3g0092671 52.571 175 77 3 7 178 6 177 9.01e-63 212
Msa1199400 MtrunA17_Chr1g0197351 50.000 220 96 5 6 219 42 253 1.85e-60 205
Msa1199400 MtrunA17_Chr6g0481091 53.595 153 71 0 6 158 6 158 1.49e-55 184
Msa1199400 MtrunA17_Chr2g0309891 52.866 157 73 1 1 156 1 157 8.71e-54 183
Msa1199400 MtrunA17_Chr5g0433781 50.888 169 82 1 1 168 1 169 5.90e-53 188
Msa1199400 MtrunA17_Chr3g0109821 50.888 169 81 2 1 167 1 169 3.47e-52 186
Msa1199400 MtrunA17_Chr5g0428991 49.045 157 80 0 1 157 20 176 1.48e-50 181
Msa1199400 MtrunA17_Chr3g0128111 50.000 152 72 2 7 156 43 192 2.16e-49 169
Msa1199400 MtrunA17_Chr3g0128151 49.359 156 79 0 1 156 17 172 9.27e-49 176
Msa1199400 MtrunA17_Chr4g0056541 42.453 212 112 6 8 215 9 214 4.86e-48 169
Msa1199400 MtrunA17_Chr5g0400461 45.405 185 91 2 1 178 1 182 5.88e-48 167
Msa1199400 MtrunA17_Chr4g0054791 47.273 165 84 1 1 162 1 165 1.70e-47 166
Msa1199400 MtrunA17_Chr1g0200561 49.080 163 74 4 8 166 21 178 6.31e-47 165
Msa1199400 MtrunA17_Chr2g0309331 46.471 170 83 4 8 175 12 175 7.83e-47 165
Msa1199400 MtrunA17_Chr4g0060931 47.170 159 80 2 6 162 17 173 5.97e-46 163
Msa1199400 MtrunA17_Chr3g0091921 47.799 159 79 2 6 162 16 172 1.37e-45 160
Msa1199400 MtrunA17_Chr8g0372121 47.682 151 76 2 8 157 8 156 1.48e-45 160
Msa1199400 MtrunA17_Chr4g0017921 50.323 155 65 4 8 157 10 157 3.04e-45 161
Msa1199400 MtrunA17_Chr4g0018391 41.341 179 95 5 8 183 9 180 3.77e-45 160
Msa1199400 MtrunA17_Chr7g0217721 42.541 181 86 3 5 169 18 196 6.86e-45 160
Msa1199400 MtrunA17_Chr5g0398971 42.391 184 94 5 8 187 9 184 1.02e-44 159
Msa1199400 MtrunA17_Chr6g0453451 44.186 172 88 3 5 172 19 186 1.22e-44 158
Msa1199400 MtrunA17_Chr6g0484441 47.682 151 75 2 6 156 5 151 1.25e-44 159
Msa1199400 MtrunA17_Chr4g0076731 46.104 154 78 4 6 158 54 203 6.09e-44 159
Msa1199400 MtrunA17_Chr4g0038751 51.634 153 64 3 7 156 16 161 7.58e-44 155
Msa1199400 MtrunA17_Chr2g0318081 45.513 156 83 1 1 156 11 164 1.97e-43 156
Msa1199400 MtrunA17_Chr2g0316971 48.125 160 75 4 6 160 23 179 2.02e-43 157
Msa1199400 MtrunA17_Chr5g0405211 46.104 154 74 3 8 157 10 158 3.47e-43 155
Msa1199400 MtrunA17_Chr3g0124761 46.497 157 78 3 5 158 6 159 5.94e-43 153
Msa1199400 MtrunA17_Chr6g0453131 45.342 161 76 5 6 156 15 173 1.17e-42 155
Msa1199400 MtrunA17_Chr8g0361731 42.593 162 80 4 6 156 14 173 1.71e-42 154
Msa1199400 MtrunA17_Chr8g0346001 42.945 163 77 3 8 157 17 176 2.31e-42 155
Msa1199400 MtrunA17_Chr7g0253011 47.134 157 75 3 6 156 17 171 2.56e-42 154
Msa1199400 MtrunA17_Chr3g0139331 44.654 159 82 3 6 162 11 165 1.59e-41 150
Msa1199400 MtrunA17_Chr6g0461661 45.513 156 77 4 6 156 18 170 2.65e-41 151
Msa1199400 MtrunA17_Chr7g0217711 48.201 139 70 1 5 143 18 154 4.07e-41 144
Msa1199400 MtrunA17_Chr5g0417001 42.857 161 80 4 6 156 14 172 4.21e-41 150
Msa1199400 MtrunA17_Chr7g0252971 37.441 211 105 6 6 201 8 206 5.19e-41 149
Msa1199400 MtrunA17_Chr2g0318101 36.752 234 110 7 4 209 13 236 4.83e-40 147
Msa1199400 MtrunA17_Chr8g0359921 45.752 153 79 2 6 156 14 164 8.40e-40 145
Msa1199400 MtrunA17_Chr4g0042561 42.945 163 87 3 2 160 5 165 1.42e-39 143
Msa1199400 MtrunA17_Chr3g0130731 42.675 157 84 3 5 158 6 159 1.43e-39 144
Msa1199400 MtrunA17_Chr8g0384721 42.405 158 84 3 5 158 6 160 2.67e-39 143
Msa1199400 MtrunA17_Chr5g0417791 43.312 157 83 3 5 157 2 156 3.48e-38 139
Msa1199400 MtrunA17_Chr8g0345691 45.270 148 72 5 9 153 15 156 8.35e-38 142
Msa1199400 MtrunA17_Chr5g0442771 41.718 163 81 4 6 156 18 178 9.63e-38 140
Msa1199400 MtrunA17_Chr7g0214071 42.771 166 82 4 5 166 14 170 9.68e-38 138
Msa1199400 MtrunA17_Chr1g0147421 44.805 154 78 4 6 156 27 176 1.62e-37 140
Msa1199400 MtrunA17_Chr2g0312321 42.767 159 82 4 1 156 6 158 1.99e-37 139
Msa1199400 MtrunA17_Chr4g0047841 48.485 132 64 2 4 133 13 142 2.83e-37 139
Msa1199400 MtrunA17_Chr7g0263931 40.476 168 91 4 5 166 10 174 3.37e-37 139
Msa1199400 MtrunA17_Chr2g0311651 41.212 165 81 3 7 156 23 186 3.97e-37 138
Msa1199400 MtrunA17_Chr2g0326361 42.581 155 81 4 8 156 16 168 6.23e-37 138
Msa1199400 MtrunA17_Chr2g0311661 48.855 131 62 2 7 133 22 151 1.87e-36 135
Msa1199400 MtrunA17_Chr1g0183741 33.333 240 138 6 6 241 10 231 1.96e-36 135
Msa1199400 MtrunA17_Chr3g0144271 46.715 137 68 3 6 139 23 157 7.84e-36 137
Msa1199400 MtrunA17_Chr8g0345671 43.243 148 75 5 9 153 14 155 1.57e-35 135
Msa1199400 MtrunA17_Chr7g0261411 40.789 152 82 3 6 155 10 155 5.29e-35 132
Msa1199400 MtrunA17_Chr2g0321741 44.531 128 63 2 26 153 12 131 1.90e-34 132
Msa1199400 MtrunA17_Chr8g0345711 45.669 127 65 3 9 132 15 140 1.53e-33 124
Msa1199400 MtrunA17_Chr8g0385991 38.506 174 92 4 2 168 10 175 9.84e-33 124
Msa1199400 MtrunA17_Chr3g0131911 37.572 173 94 3 2 164 10 178 9.79e-32 121
Msa1199400 MtrunA17_Chr8g0345721 38.889 162 63 6 9 135 38 198 3.69e-31 119
Msa1199400 MtrunA17_Chr8g0345731 43.077 130 67 4 9 132 27 155 8.21e-31 117
Msa1199400 MtrunA17_Chr8g0345741 47.009 117 58 3 19 132 4 119 1.24e-30 115
Msa1199400 MtrunA17_Chr3g0113001 41.525 118 62 2 60 172 17 132 1.47e-28 114
Msa1199400 MtrunA17_Chr2g0321631 38.365 159 90 5 8 158 6 164 2.17e-28 112
Msa1199400 MtrunA17_Chr7g0266701 33.962 159 95 5 8 156 6 164 5.72e-26 106
Msa1199400 MtrunA17_Chr4g0026141 36.076 158 94 4 8 158 7 164 8.30e-26 105
Msa1199400 MtrunA17_Chr8g0345701 39.007 141 66 5 9 132 10 147 2.32e-25 102
Msa1199400 MtrunA17_Chr3g0113031 42.308 104 53 3 72 169 4 106 2.55e-25 104
Msa1199400 MtrunA17_Chr4g0050701 37.500 160 82 5 6 157 11 160 5.77e-25 101
Msa1199400 MtrunA17_Chr7g0243371 48.718 78 36 2 60 133 14 91 1.42e-19 84.3
Msa1199400 MtrunA17_Chr8g0384351 33.537 164 81 7 5 165 9 147 2.29e-18 82.8
Msa1199400 MtrunA17_Chr3g0130321 32.768 177 96 7 5 167 6 173 1.21e-15 75.5
Msa1199400 MtrunA17_Chr7g0251651 29.688 128 86 3 5 131 17 141 1.99e-13 68.9
Msa1199400 MtrunA17_Chr4g0040541 29.885 174 98 8 3 159 45 211 2.08e-11 64.7
Msa1199400 MtrunA17_Chr2g0282871 29.213 178 93 8 3 159 50 215 2.79e-11 64.3
Msa1199400 MtrunA17_Chr7g0251661 26.846 149 102 4 9 153 13 158 5.61e-11 60.8
Msa1199400 MtrunA17_Chr1g0168571 30.263 152 94 7 12 156 11 157 7.70e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1199400 AT5G09330.5 64.088 181 65 0 1 181 1 181 2.23e-85 270
Msa1199400 AT5G09330.2 64.088 181 65 0 1 181 1 181 2.23e-85 270
Msa1199400 AT5G09330.4 64.088 181 65 0 1 181 1 181 2.23e-85 270
Msa1199400 AT5G09330.3 64.088 181 65 0 1 181 1 181 2.23e-85 270
Msa1199400 AT5G09330.1 64.088 181 65 0 1 181 1 181 2.23e-85 270
Msa1199400 AT5G64060.1 63.889 180 65 0 1 180 1 180 1.18e-81 256
Msa1199400 AT5G04410.1 57.303 178 76 0 2 179 5 182 9.93e-74 242
Msa1199400 AT3G10500.1 57.059 170 73 0 2 171 5 174 2.08e-69 230
Msa1199400 AT3G10490.1 55.114 176 77 2 6 180 27 201 5.23e-67 214
Msa1199400 AT3G10480.1 56.322 174 74 2 6 178 27 199 2.45e-66 219
Msa1199400 AT3G10480.2 55.491 173 76 1 6 178 27 198 3.76e-66 219
Msa1199400 AT3G10490.2 55.114 176 77 2 6 180 27 201 4.26e-66 219
Msa1199400 AT3G10480.3 47.343 207 74 3 6 178 27 232 1.43e-59 204
Msa1199400 AT1G34190.1 50.000 174 87 0 7 180 17 190 1.11e-58 202
Msa1199400 AT1G34180.3 47.826 184 90 1 7 184 17 200 1.47e-58 199
Msa1199400 AT1G34180.1 47.826 184 90 1 7 184 17 200 9.23e-58 200
Msa1199400 AT3G17730.1 54.430 158 72 0 1 158 1 158 1.73e-56 187
Msa1199400 AT1G34180.4 44.898 196 90 2 7 184 17 212 4.44e-55 190
Msa1199400 AT1G34180.2 44.898 196 90 2 7 184 17 212 2.10e-54 191
Msa1199400 AT1G65910.1 49.701 167 84 0 1 167 1 167 1.27e-53 190
Msa1199400 AT3G49530.2 45.274 201 95 3 1 200 8 194 1.31e-53 185
Msa1199400 AT3G49530.1 45.274 201 95 3 1 200 8 194 4.09e-53 185
Msa1199400 AT1G33060.1 50.641 156 77 0 1 156 19 174 2.87e-52 186
Msa1199400 AT1G33060.2 50.641 156 77 0 1 156 19 174 2.96e-52 187
Msa1199400 AT5G24590.2 50.633 158 77 1 1 157 8 165 3.91e-52 182
Msa1199400 AT2G27300.1 50.980 153 67 2 1 153 9 153 3.19e-51 177
Msa1199400 AT3G03200.1 52.866 157 73 1 1 156 1 157 1.63e-49 176
Msa1199400 AT5G46590.1 52.597 154 69 3 6 156 6 158 4.41e-49 170
Msa1199400 AT4G17980.1 50.968 155 72 2 6 156 6 160 1.27e-48 167
Msa1199400 AT5G17260.1 50.318 157 77 1 1 156 1 157 2.19e-48 173
Msa1199400 AT4G17980.2 50.000 160 76 2 1 156 1 160 3.05e-48 167
Msa1199400 AT4G35580.1 46.795 156 83 0 1 156 4 159 1.31e-47 171
Msa1199400 AT4G35580.3 46.795 156 83 0 1 156 4 159 1.51e-47 172
Msa1199400 AT4G35580.2 46.795 156 83 0 1 156 4 159 1.84e-47 171
Msa1199400 AT5G22290.1 49.020 153 71 2 1 153 16 161 1.91e-47 167
Msa1199400 AT5G46590.2 55.556 135 59 1 6 139 6 140 2.16e-47 165
Msa1199400 AT5G61430.1 47.799 159 79 2 6 162 16 172 3.66e-47 166
Msa1199400 AT1G54330.1 49.080 163 80 1 1 163 1 160 4.13e-47 165
Msa1199400 AT3G44290.2 47.368 152 72 2 2 153 10 153 6.23e-47 162
Msa1199400 AT4G10350.1 48.701 154 72 2 8 157 11 161 1.04e-46 165
Msa1199400 AT1G12260.1 42.077 183 97 4 8 187 9 185 1.47e-46 166
Msa1199400 AT1G12260.2 42.077 183 97 4 8 187 9 185 1.55e-46 164
Msa1199400 AT1G62700.1 41.579 190 102 5 8 193 9 193 2.03e-46 166
Msa1199400 AT1G62700.2 41.579 190 102 5 8 193 9 193 2.03e-46 166
Msa1199400 AT1G33280.1 48.701 154 69 3 8 157 10 157 3.24e-46 162
Msa1199400 AT1G71930.2 46.203 158 78 3 8 162 11 164 3.39e-46 163
Msa1199400 AT1G71930.1 46.203 158 78 3 8 162 11 164 3.39e-46 163
Msa1199400 AT5G39610.1 49.057 159 77 2 6 162 20 176 6.51e-46 161
Msa1199400 AT3G44290.1 47.368 152 72 2 2 153 10 153 7.19e-46 162
Msa1199400 AT1G32870.2 49.405 168 81 2 6 171 10 175 7.07e-45 164
Msa1199400 AT1G32870.1 49.405 168 81 2 6 171 10 175 8.85e-45 164
Msa1199400 AT1G32510.1 45.283 159 79 2 6 156 6 164 1.53e-44 157
Msa1199400 AT5G07680.2 46.250 160 80 3 6 162 3 159 1.64e-44 158
Msa1199400 AT4G27410.2 36.752 234 145 2 1 233 9 240 1.64e-44 158
Msa1199400 AT1G32870.3 49.405 168 81 2 6 171 46 211 2.23e-44 164
Msa1199400 AT5G07680.1 46.250 160 80 3 6 162 17 173 2.34e-44 158
Msa1199400 AT1G01720.1 43.085 188 96 4 5 184 6 190 3.98e-44 156
Msa1199400 AT2G24430.2 48.366 153 74 3 6 156 16 165 6.29e-44 157
Msa1199400 AT2G24430.1 48.366 153 74 3 6 156 16 165 6.29e-44 157
Msa1199400 AT4G36160.1 44.000 175 80 5 8 177 12 173 7.40e-44 158
Msa1199400 AT4G36160.3 44.000 175 80 5 8 177 12 173 7.40e-44 158
Msa1199400 AT4G36160.2 44.000 175 80 5 8 177 16 177 9.62e-44 158
Msa1199400 AT2G18060.3 42.857 175 81 5 8 177 11 171 1.41e-43 157
Msa1199400 AT2G18060.1 42.857 175 81 5 8 177 11 171 1.41e-43 157
Msa1199400 AT2G02450.1 44.805 154 80 3 6 158 51 200 3.52e-43 156
Msa1199400 AT3G12977.1 44.099 161 87 2 1 160 13 171 4.51e-43 153
Msa1199400 AT5G62380.2 45.283 159 80 3 2 157 3 157 4.89e-43 155
Msa1199400 AT5G62380.1 45.283 159 80 3 2 157 3 157 4.89e-43 155
Msa1199400 AT2G02450.2 44.805 154 80 3 6 158 51 200 5.81e-43 157
Msa1199400 AT3G29035.1 46.108 167 86 2 6 170 24 188 8.15e-43 154
Msa1199400 AT3G04060.1 45.625 160 82 3 3 159 17 174 8.96e-43 154
Msa1199400 AT1G79580.3 47.368 152 75 3 8 157 19 167 1.06e-42 155
Msa1199400 AT1G79580.5 47.368 152 75 3 8 157 19 167 1.06e-42 155
Msa1199400 AT1G79580.4 47.368 152 75 3 8 157 19 167 1.06e-42 155
Msa1199400 AT1G79580.2 47.368 152 75 3 8 157 19 167 1.06e-42 155
Msa1199400 AT1G79580.1 47.368 152 75 3 8 157 19 167 1.06e-42 155
Msa1199400 AT3G18400.1 44.586 157 84 2 6 162 5 158 1.07e-42 153
Msa1199400 AT2G43000.1 47.020 151 77 2 7 156 19 167 1.09e-42 152
Msa1199400 AT1G69490.1 42.473 186 99 4 6 187 9 190 1.66e-42 151
Msa1199400 AT4G27410.3 35.341 249 145 3 1 233 9 257 1.82e-42 153
Msa1199400 AT5G18270.2 47.799 159 74 4 6 159 21 175 1.99e-42 153
Msa1199400 AT5G18270.1 47.170 159 75 4 6 159 21 175 2.03e-42 153
Msa1199400 AT5G66300.1 43.636 165 89 3 8 170 14 176 3.85e-42 151
Msa1199400 AT5G08790.1 44.304 158 80 3 6 158 7 161 6.07e-42 150
Msa1199400 AT1G26870.1 45.062 162 76 4 6 156 16 175 6.47e-42 154
Msa1199400 AT1G77450.1 46.104 154 77 3 8 158 12 162 1.14e-41 149
Msa1199400 AT1G76420.1 47.097 155 77 3 6 158 22 173 1.20e-41 151
Msa1199400 AT5G53950.1 49.359 156 71 4 6 156 17 169 1.42e-41 152
Msa1199400 AT2G46770.1 41.916 167 77 4 8 157 18 181 1.90e-41 151
Msa1199400 AT3G15500.1 43.949 157 86 1 1 157 9 163 3.10e-41 149
Msa1199400 AT1G52890.1 43.949 157 86 1 6 162 14 168 4.23e-41 149
Msa1199400 AT2G17040.1 45.098 153 74 3 7 156 7 152 8.10e-41 147
Msa1199400 AT5G39820.1 40.805 174 78 4 6 156 20 191 9.49e-41 149
Msa1199400 AT3G15170.1 45.625 160 79 4 8 162 22 178 2.39e-40 147
Msa1199400 AT3G61910.1 41.566 166 77 4 8 156 13 175 1.42e-39 145
Msa1199400 AT1G56010.2 40.331 181 94 4 1 173 14 188 2.28e-39 145
Msa1199400 AT1G32770.1 41.071 168 82 3 5 158 15 179 3.59e-39 145
Msa1199400 AT5G63790.1 42.405 158 83 3 6 158 50 204 5.81e-39 143
Msa1199400 AT5G63790.2 42.405 158 83 3 6 158 60 214 6.22e-39 144
Msa1199400 AT5G13180.1 45.122 164 82 3 2 163 10 167 2.45e-38 140
Msa1199400 AT1G61110.1 42.169 166 81 3 4 156 14 177 5.11e-38 141
Msa1199400 AT3G04070.2 42.331 163 80 3 6 156 10 170 9.17e-37 138
Msa1199400 AT3G15510.1 41.250 160 79 3 10 156 21 178 1.69e-36 138
Msa1199400 AT2G33480.2 44.872 156 79 2 2 157 11 159 2.19e-36 135
Msa1199400 AT2G33480.1 44.872 156 81 1 2 157 11 161 2.85e-36 135
Msa1199400 AT3G12910.1 39.521 167 81 4 7 156 22 185 7.21e-35 132
Msa1199400 AT3G04070.1 37.430 179 82 3 6 156 10 186 1.23e-34 133
Msa1199400 AT4G28530.1 41.176 170 76 4 5 156 9 172 1.60e-34 132
Msa1199400 AT4G01520.1 43.791 153 76 4 9 156 7 154 3.12e-34 130
Msa1199400 AT5G04395.1 45.205 146 66 3 6 137 28 173 3.26e-34 127
Msa1199400 AT4G01540.3 44.444 153 75 4 9 156 7 154 2.29e-33 130
Msa1199400 AT4G01540.4 44.444 153 75 4 9 156 7 154 2.85e-33 130
Msa1199400 AT4G01540.2 44.444 153 75 4 9 156 7 154 4.00e-33 130
Msa1199400 AT4G01540.1 44.444 153 75 4 9 156 7 154 5.47e-33 130
Msa1199400 AT3G12977.2 50.485 103 50 1 60 161 17 119 1.06e-32 124
Msa1199400 AT3G10490.4 54.902 102 44 2 80 180 1 101 1.91e-32 127
Msa1199400 AT3G10490.3 54.902 102 44 2 80 180 1 101 1.91e-32 127
Msa1199400 AT5G61430.2 50.476 105 50 1 60 162 5 109 4.76e-32 124
Msa1199400 AT1G52880.1 40.252 159 81 3 10 156 21 177 2.33e-31 123
Msa1199400 AT4G01550.1 36.866 217 112 8 5 209 3 206 4.74e-31 125
Msa1199400 AT4G10350.2 51.579 95 46 0 63 157 20 114 2.11e-30 119
Msa1199400 AT1G56010.1 43.590 117 63 1 60 173 5 121 2.29e-28 113
Msa1199400 AT3G44350.2 37.107 159 95 5 5 158 4 162 3.09e-26 107
Msa1199400 AT5G22380.1 34.783 161 98 5 5 158 4 164 1.38e-25 105
Msa1199400 AT3G44350.1 37.580 157 93 5 5 156 4 160 3.97e-24 98.6
Msa1199400 AT3G04420.2 37.333 150 87 4 9 156 6 150 6.86e-23 99.0
Msa1199400 AT2G33480.3 47.368 95 50 0 63 157 10 104 1.83e-22 95.5
Msa1199400 AT3G04420.1 37.333 150 87 4 9 156 6 150 2.76e-22 98.2
Msa1199400 AT1G02230.1 39.062 128 70 3 9 131 6 130 5.05e-22 97.4
Msa1199400 AT1G02250.1 38.281 128 71 4 9 131 6 130 1.35e-20 93.6
Msa1199400 AT4G28530.2 37.405 131 62 3 5 117 9 137 1.95e-19 89.4
Msa1199400 AT1G02220.1 33.108 148 89 4 9 154 6 145 1.18e-18 88.2
Msa1199400 AT2G18060.2 41.489 94 41 3 86 177 2 83 2.05e-18 85.5
Msa1199400 AT5G64530.2 39.394 132 64 5 6 135 3 120 2.10e-18 82.4
Msa1199400 AT5G64530.1 39.394 132 64 5 6 135 3 120 2.27e-18 83.2
Msa1199400 AT2G43000.2 42.529 87 49 1 71 156 3 89 1.55e-17 81.3
Msa1199400 AT5G22290.2 46.269 67 30 1 87 153 2 62 1.19e-16 79.7
Msa1199400 AT1G01010.1 32.692 156 86 6 9 153 6 153 4.19e-16 80.5
Msa1199400 AT3G56530.1 30.201 149 99 3 8 154 54 199 3.69e-14 73.6
Msa1199400 AT3G04430.1 30.435 138 72 6 12 132 6 136 2.83e-12 66.2
Msa1199400 AT5G56620.2 29.167 240 118 11 6 210 43 265 5.20e-11 64.7
Msa1199400 AT5G56620.3 29.167 240 118 11 6 210 43 265 5.72e-11 64.7
Msa1199400 AT4G28500.1 30.286 175 96 9 3 159 56 222 5.78e-11 63.9
Msa1199400 AT3G55210.1 25.926 162 102 5 6 154 11 167 8.50e-11 63.2

Find 187 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATCTCCTCCTCCGAATT+AGG 0.112675 8_1:-51460372 Msa1199400:five_prime_UTR
TGAAAACGATGATTCAATTT+TGG 0.123042 8_1:+51460327 None:intergenic
CCCATATTGTGCACCATTCC+TGG 0.177058 8_1:+51457598 None:intergenic
CTCCAGTCTTCCTCATTAAA+TGG 0.199186 8_1:+51457572 None:intergenic
TTCGATGGCTATACCGAAAT+TGG 0.217229 8_1:-51459992 Msa1199400:exon
AGCAACCCGAGAAACGATTT+TGG 0.238011 8_1:-51460435 Msa1199400:five_prime_UTR
CTCCATGCTATTGGATATAA+TGG 0.269719 8_1:-51457455 Msa1199400:CDS
CCCAGGAATGGTGCACAATA+TGG 0.271510 8_1:-51457599 Msa1199400:CDS
CCTATTTGACATTCATTTGC+AGG 0.281187 8_1:+51457167 None:intergenic
CCTTTCCAGTATGAAATATC+AGG 0.282193 8_1:+51459563 None:intergenic
TAAAGACACATTGTTTGAAT+TGG 0.282968 8_1:-51456385 Msa1199400:three_prime_UTR
ATCCAATAGCATGGAGATTC+TGG 0.283199 8_1:+51457462 None:intergenic
CGAAACCCCGGAACCAATTT+CGG 0.285219 8_1:+51459979 None:intergenic
CAATCTCCTCCTCCGAATTA+GGG 0.309625 8_1:-51460371 Msa1199400:five_prime_UTR
CCTGTTTGACATGAATTTGC+AGG 0.309691 8_1:+51457332 None:intergenic
CCTGCAAATTCATGTCAAAT+AGG 0.314809 8_1:-51457293 Msa1199400:CDS
CCTGTTTGACGTGAATTTGC+AGG 0.316892 8_1:+51457128 None:intergenic
CCTGCAAATGAATGTCAAAT+AGG 0.318011 8_1:-51457167 Msa1199400:CDS
CCTATTTGACATGAATTTGC+AGG 0.318113 8_1:+51457293 None:intergenic
TTATCTCCAAAACGGTGATT+TGG 0.320011 8_1:-51459728 Msa1199400:CDS
GACATAATTTCAAGATATAA+TGG 0.320590 8_1:+51456129 None:intergenic
ATGAATCGATCTACGGAAAC+AGG 0.329353 8_1:-51459655 Msa1199400:CDS
ATCTAGACTCCGAGATGTTC+TGG 0.337030 8_1:-51456564 Msa1199400:CDS
GACCAGAATCTCCATGCTAT+TGG 0.337192 8_1:-51457464 Msa1199400:CDS
GCAATAGTGCCAAAGTATTA+AGG 0.338033 8_1:+51456452 None:intergenic
AGTAATGTATTATTGTGATT+TGG 0.338142 8_1:-51456320 Msa1199400:three_prime_UTR
CCTGTTTGACATGAATTTGC+TGG 0.344593 8_1:+51457386 None:intergenic
TTTCACTTTAGAACCTTGTT+TGG 0.353707 8_1:-51456178 Msa1199400:three_prime_UTR
GATCTACGGAAACAGGGTTT+TGG 0.358106 8_1:-51459648 Msa1199400:CDS
ACCACTCCAAATCACCGTTT+TGG 0.358606 8_1:+51459722 None:intergenic
GTAATGTATTATTGTGATTT+GGG 0.363376 8_1:-51456319 Msa1199400:three_prime_UTR
GGCTATACCGAAATTGGTTC+CGG 0.364984 8_1:-51459986 Msa1199400:CDS
CCTTCAAATTCATGTCAAAC+AGG 0.368528 8_1:-51457209 Msa1199400:CDS
AAAGACACATTGTTTGAATT+GGG 0.372063 8_1:-51456384 Msa1199400:three_prime_UTR
CCAGAAGGTGATTTGGTCAT+TGG 0.375489 8_1:-51456418 Msa1199400:three_prime_UTR
TGACATTCATTTGCAGGATC+GGG 0.375493 8_1:+51457173 None:intergenic
GGGTTTCGATTCTCTCCAAC+TGG 0.381256 8_1:-51459964 Msa1199400:CDS
TTATGAACCTTGGCAAGCTT+TGG 0.383206 8_1:-51460282 Msa1199400:five_prime_UTR
GGATGACTACTTGGATTTCA+TGG 0.384800 8_1:-51456596 Msa1199400:CDS
TTTGGGAGACCTGGATTGCT+TGG 0.388164 8_1:-51456671 Msa1199400:CDS
GATTTGGTCATTGGCACATA+TGG 0.392401 8_1:-51456409 Msa1199400:three_prime_UTR
TTGGGAGACCTGGATTGCTT+GGG 0.394189 8_1:-51456670 Msa1199400:CDS
ATGTGCTAAAGTCAGCATTC+TGG 0.394807 8_1:+51456638 None:intergenic
TGGCACTATTGCTGCAGTGC+TGG 0.394915 8_1:-51456441 Msa1199400:three_prime_UTR
GACTGATAGAGGAATTGTTC+AGG 0.397382 8_1:-51459479 Msa1199400:intron
CCAATGACCAAATCACCTTC+TGG 0.400154 8_1:+51456418 None:intergenic
TGATCAAATATTTCCTCAAA+AGG 0.402857 8_1:-51459933 Msa1199400:CDS
CTCGTGGGGATCGTACTGAT+TGG 0.405759 8_1:-51459537 Msa1199400:CDS
TCATCGGCGGAACCCTAATT+CGG 0.407702 8_1:+51460359 None:intergenic
TAAAATCCAAAATCGTTTCT+CGG 0.418105 8_1:+51460429 None:intergenic
AAGTCAGCATTCTGGCCAAC+AGG 0.430726 8_1:+51456646 None:intergenic
GCTATACCGAAATTGGTTCC+GGG 0.435182 8_1:-51459985 Msa1199400:CDS
GATAAGGATTTGACTGATAG+AGG 0.435530 8_1:-51459490 Msa1199400:CDS
CCATATTGTGCACCATTCCT+GGG 0.435926 8_1:+51457599 None:intergenic
AAAACCCTGATATTTCATAC+TGG 0.438226 8_1:-51459568 Msa1199400:CDS
TGACATGAATTTGCAGGGTA+GGG 0.440925 8_1:+51457299 None:intergenic
TGACATGAATTTGCAGGGTC+GGG 0.444499 8_1:+51457338 None:intergenic
TGTCCGATAGGGAAGAAGTA+TGG 0.449188 8_1:-51459691 Msa1199400:CDS
TGACATGAATTTGCTGGATC+GGG 0.450774 8_1:+51457392 None:intergenic
CCTGTTTGACATGAATTTGA+AGG 0.451294 8_1:+51457209 None:intergenic
CCTGCAAATTCACGTCAAAC+AGG 0.452097 8_1:-51457128 Msa1199400:CDS
TGACGTGAATTTGCAGGGTC+GGG 0.454809 8_1:+51457134 None:intergenic
TGTCAAACAGGATTACAAAC+AGG 0.456291 8_1:-51457374 Msa1199400:CDS
AAAATCCAAAATCGTTTCTC+GGG 0.458565 8_1:+51460430 None:intergenic
CCAGCAAATTCATGTCAAAC+AGG 0.459332 8_1:-51457386 Msa1199400:CDS
CAACAGGTCCCAAGCAATCC+AGG 0.459478 8_1:+51456662 None:intergenic
AAAATGGCATTAACATTATG+AGG 0.460148 8_1:+51456814 None:intergenic
CCTGTGAATTCATGTCAAAC+AGG 0.460258 8_1:-51457251 Msa1199400:CDS
TGACATGAATTTGAAGGGTC+GGG 0.460660 8_1:+51457215 None:intergenic
GGAGATTGAATGATTTCAAT+CGG 0.460952 8_1:+51460386 None:intergenic
CAACAGAATAATCAAATTGT+GGG 0.461766 8_1:-51459598 Msa1199400:CDS
TGAGTATAGGCTTGAAGATA+AGG 0.462659 8_1:-51459506 Msa1199400:CDS
TTGACATTCATTTGCAGGAT+CGG 0.462975 8_1:+51457172 None:intergenic
CGTCACTGGACTTGATCACT+AGG 0.464527 8_1:-51460238 Msa1199400:five_prime_UTR
CCAGGAATGGTGCACAATAT+GGG 0.464995 8_1:-51457598 Msa1199400:CDS
GTGCTGGCCAGAAGGTGATT+TGG 0.466035 8_1:-51456425 Msa1199400:three_prime_UTR
ATTGGGTTATGCATGAGTAT+AGG 0.467758 8_1:-51459519 Msa1199400:CDS
CCTGCAAATTCATGTCAAAC+AGG 0.469358 8_1:-51457332 Msa1199400:CDS
AAAAGGAAGGTCCTGGTCCC+AGG 0.470057 8_1:-51457616 Msa1199400:CDS
CACATACGGAATGGCTCCTA+CGG 0.471738 8_1:-51456620 Msa1199400:CDS
ATATCCATGCCAAGTCAATC+AGG 0.473006 8_1:-51457428 Msa1199400:CDS
CGTTCATACTTTATGAACCT+TGG 0.474224 8_1:-51460292 Msa1199400:five_prime_UTR
CATATACAAATACGCACCTT+GGG 0.480163 8_1:-51459863 Msa1199400:CDS
TTGACGTGAATTTGCAGGGT+CGG 0.485241 8_1:+51457133 None:intergenic
TTGACATGAATTTGCAGGGT+AGG 0.487996 8_1:+51457298 None:intergenic
AGTGCAGCTGGCTCAGCAAA+TGG 0.489746 8_1:+51457530 None:intergenic
AAAGTGGGAGCTAGTGCAGC+TGG 0.489936 8_1:+51457518 None:intergenic
TCGTGGGGATCGTACTGATT+GGG 0.493211 8_1:-51459536 Msa1199400:CDS
AACCATTTAATGAGGAAGAC+TGG 0.493900 8_1:-51457574 Msa1199400:CDS
CTGGATTGCTTGGGACCTGT+TGG 0.494191 8_1:-51456661 Msa1199400:CDS
GATTTATCTTATCTCCAAAA+CGG 0.496570 8_1:-51459736 Msa1199400:CDS
CCTGTTTGACATGAATTCAC+AGG 0.497735 8_1:+51457251 None:intergenic
AAATTCATGTAAAACAAGAT+TGG 0.499270 8_1:-51457078 Msa1199400:CDS
GAGCGTCGGCCTTAATACTT+TGG 0.504382 8_1:-51456461 Msa1199400:three_prime_UTR
AATCTGTAAGGTATTTCAAA+AGG 0.505571 8_1:-51457633 Msa1199400:CDS
ATCGTGAATGAACACGCTCT+TGG 0.506536 8_1:-51456267 Msa1199400:three_prime_UTR
TTGATCAATTCAACTCCAGT+TGG 0.510807 8_1:+51459949 None:intergenic
CTTCCATACTTCTTCCCTAT+CGG 0.514378 8_1:+51459688 None:intergenic
TTGACATGAATTTGCAGGGT+CGG 0.514389 8_1:+51457337 None:intergenic
TTGACATGAATTTGCTGGAT+CGG 0.514396 8_1:+51457391 None:intergenic
ACATATACAAATACGCACCT+TGG 0.514869 8_1:-51459864 Msa1199400:CDS
CTGTTTGACATGAATTTGAA+GGG 0.516573 8_1:+51457210 None:intergenic
ATTGATTTGATTCGATTCGA+TGG 0.521027 8_1:-51460007 Msa1199400:exon
GAATTTGCAGGGTCGGGAGA+AGG 0.521896 8_1:+51457344 None:intergenic
CTGTTTGACGTGAATTTGCA+GGG 0.521995 8_1:+51457129 None:intergenic
GAGGAGACAATGCAAACTGC+AGG 0.522031 8_1:+51456833 None:intergenic
GGATTCCTATGTAATCTGTA+AGG 0.523374 8_1:-51457645 Msa1199400:CDS
AGAAGTATGGAAGTGGGTCG+AGG 0.523425 8_1:-51459678 Msa1199400:CDS
TCAACAGAATAATCAAATTG+TGG 0.524176 8_1:-51459599 Msa1199400:CDS
TCAGAAAATATCATGCCAAA+AGG 0.525023 8_1:+51456489 None:intergenic
TGGTATTTCTTCTGTCCGAT+AGG 0.528063 8_1:-51459703 Msa1199400:CDS
TTGACATGAATTTGAAGGGT+CGG 0.530544 8_1:+51457214 None:intergenic
TTCCTCAAAAGGAAAGTGAT+GGG 0.530868 8_1:-51459922 Msa1199400:CDS
CAATCCTGATTGACTTGGCA+TGG 0.531426 8_1:+51457424 None:intergenic
CTGTTTGACATGAATTTGCA+GGG 0.532638 8_1:+51457333 None:intergenic
GAGTGCTGCGGAACCTAAGT+TGG 0.533048 8_1:-51456539 Msa1199400:CDS
TATGAATTATCCACAGGGTC+GGG 0.534846 8_1:+51457047 None:intergenic
GTGAATGAACACGCTCTTGG+TGG 0.535364 8_1:-51456264 Msa1199400:three_prime_UTR
CATGAATTTGCAGGGCCAGT+GGG 0.536500 8_1:+51457092 None:intergenic
AAATACCTTACAGATTACAT+AGG 0.536956 8_1:+51457640 None:intergenic
GGCATCAATCCTGATTGACT+TGG 0.537086 8_1:+51457419 None:intergenic
AACCATTATATCCAATAGCA+TGG 0.540691 8_1:+51457453 None:intergenic
GAATTTGCTGGATCGGGAGA+AGG 0.544144 8_1:+51457398 None:intergenic
TTATCCACAGGGTCGGGAGA+AGG 0.544235 8_1:+51457053 None:intergenic
TGATGATATGAATTATCCAC+AGG 0.545478 8_1:+51457041 None:intergenic
TTTCCTCAAAAGGAAAGTGA+TGG 0.545620 8_1:-51459923 Msa1199400:CDS
GAATTTGAAGGGTCGGGAGA+CGG 0.546357 8_1:+51457221 None:intergenic
TGAGACAATTATCAAAGGAA+AGG 0.549181 8_1:+51456294 None:intergenic
GGATTGGAGCTGTCTCCCAC+TGG 0.549474 8_1:-51457107 Msa1199400:CDS
CTTTCCAGTATGAAATATCA+GGG 0.551975 8_1:+51459564 None:intergenic
GGTATTTCTTCTGTCCGATA+GGG 0.553898 8_1:-51459702 Msa1199400:CDS
AATGCTGACTTTAGCACATA+CGG 0.554890 8_1:-51456634 Msa1199400:CDS
TGTAAGGTATTTCAAAAGGA+AGG 0.556870 8_1:-51457629 Msa1199400:CDS
ACATACGGAATGGCTCCTAC+GGG 0.561143 8_1:-51456619 Msa1199400:CDS
GAAGGTCCTGGTCCCAGGAA+TGG 0.561485 8_1:-51457611 Msa1199400:CDS
GACTGGAGTGATGATGAAGT+AGG 0.564465 8_1:-51457557 Msa1199400:CDS
GAATTTGCAGGGTAGGGAGA+AGG 0.564807 8_1:+51457305 None:intergenic
TCATTTGCAGGATCGGGAGA+CGG 0.564896 8_1:+51457179 None:intergenic
AGGAGACAATGCAAACTGCA+GGG 0.573526 8_1:+51456834 None:intergenic
ACATGAATTTGCAGGGCCAG+TGG 0.576347 8_1:+51457091 None:intergenic
GGCCAGGAAAACAATGCTGA+AGG 0.577250 8_1:-51456721 Msa1199400:intron
AAATTCACGTCAAACAGGAT+TGG 0.579546 8_1:-51457123 Msa1199400:CDS
ATATGAATTATCCACAGGGT+CGG 0.580394 8_1:+51457046 None:intergenic
ATAGGGAAGAAGTATGGAAG+TGG 0.581783 8_1:-51459685 Msa1199400:CDS
GTATTTCAAAAGGAAGGTCC+TGG 0.582263 8_1:-51457623 Msa1199400:CDS
AAAGTATGAACGGTGACGAA+CGG 0.583154 8_1:+51460303 None:intergenic
ATACGGAATGGCTCCTACGG+GGG 0.584987 8_1:-51456617 Msa1199400:CDS
GTCACTGGACTTGATCACTA+GGG 0.585300 8_1:-51460237 Msa1199400:five_prime_UTR
TTAGATGTCACAGGCAAAGT+GGG 0.587463 8_1:+51457503 None:intergenic
TACTGGAAAGGCACCTCGTG+GGG 0.589079 8_1:-51459551 Msa1199400:CDS
ACAAAACTATTAGATGTCAC+AGG 0.590588 8_1:+51457494 None:intergenic
CTGTTTGACATGAATTCACA+GGG 0.594081 8_1:+51457252 None:intergenic
TTGCTGCAGTGCTGGCCAGA+AGG 0.594223 8_1:-51456433 Msa1199400:three_prime_UTR
CCTGATATTTCATACTGGAA+AGG 0.594945 8_1:-51459563 Msa1199400:CDS
CTATTTGACATGAATTTGCA+GGG 0.594947 8_1:+51457294 None:intergenic
ATATGGGAAACCATTTAATG+AGG 0.595239 8_1:-51457582 Msa1199400:CDS
AGCACTCTGCCAGAACATCT+CGG 0.596496 8_1:+51456555 None:intergenic
TAACTACCTGGGAGATCCCA+AGG 0.602529 8_1:+51459847 None:intergenic
ATTAGATGTCACAGGCAAAG+TGG 0.604507 8_1:+51457502 None:intergenic
TGTGCACCATTCCTGGGACC+AGG 0.606475 8_1:+51457605 None:intergenic
TACGCACCTTGGGATCTCCC+AGG 0.607324 8_1:-51459853 Msa1199400:intron
TGACTTTAGCACATACGGAA+TGG 0.608742 8_1:-51456629 Msa1199400:CDS
GTCGAGGATGAATCGATCTA+CGG 0.611940 8_1:-51459662 Msa1199400:CDS
TCCAAAACGGTGATTTGGAG+TGG 0.615601 8_1:-51459723 Msa1199400:CDS
TTTGCAGGGTCGGGAGAAGG+CGG 0.617658 8_1:+51457347 None:intergenic
CAAGGTTCATAAAGTATGAA+CGG 0.619816 8_1:+51460293 None:intergenic
ATACTGGAAAGGCACCTCGT+GGG 0.623402 8_1:-51459552 Msa1199400:CDS
TATCTTGAAATTATGTCCAG+AGG 0.624506 8_1:-51456123 None:intergenic
CTATACCGAAATTGGTTCCG+GGG 0.624855 8_1:-51459984 Msa1199400:CDS
AAGAACACCAAAGCTTGCCA+AGG 0.628416 8_1:+51460275 None:intergenic
GAATTCACAGGGTCTACAGA+AGG 0.634919 8_1:+51457263 None:intergenic
TCCTCAAAAGGAAAGTGATG+GGG 0.636372 8_1:-51459921 Msa1199400:CDS
AACAGAATAATCAAATTGTG+GGG 0.640227 8_1:-51459597 Msa1199400:CDS
CATACTGGAAAGGCACCTCG+TGG 0.642917 8_1:-51459553 Msa1199400:CDS
CTTCAAATTCATGTCAAACA+GGG 0.645767 8_1:-51457208 Msa1199400:CDS
TGAATCGATCTACGGAAACA+GGG 0.649117 8_1:-51459654 Msa1199400:CDS
GATGTTCTGGCAGAGTGCTG+CGG 0.652067 8_1:-51456551 Msa1199400:CDS
TAGGGAAGAAGTATGGAAGT+GGG 0.665858 8_1:-51459684 Msa1199400:CDS
TCGGCGGAACCCTAATTCGG+AGG 0.668086 8_1:+51460362 None:intergenic
GTTGGAGAGAATCGAAACCC+CGG 0.668142 8_1:+51459967 None:intergenic
GGAGACAATGCAAACTGCAG+GGG 0.668304 8_1:+51456835 None:intergenic
CATACGGAATGGCTCCTACG+GGG 0.702272 8_1:-51456618 Msa1199400:CDS
CGACGACGACATATTGCCTG+AGG 0.702294 8_1:-51456976 Msa1199400:intron
GCTACGACAACAAACAACCT+CGG 0.727689 8_1:-51460052 Msa1199400:five_prime_UTR
GATGATATGAATTATCCACA+GGG 0.748736 8_1:+51457042 None:intergenic
AATTACAGAATTCAACACCG+AGG 0.767050 8_1:+51460035 None:intergenic
CAATCAGTACGATCCCCACG+AGG 0.773083 8_1:+51459538 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAATTTAAGAGTTTA+AGG - chr8_1:51457645-51457664 Msa1199400:CDS 10.0%
!!! ATAAGTAAATTTTTTTTTGT+AGG - chr8_1:51457706-51457725 Msa1199400:intron 10.0%
!!! TAAGTAAATTTTTTTTTGTA+GGG - chr8_1:51457707-51457726 Msa1199400:intron 10.0%
!! AATACTATTAAAATTAAGTA+AGG - chr8_1:51457736-51457755 Msa1199400:intron 10.0%
!!! AATGAAAAATTCTTTATTTT+GGG + chr8_1:51460064-51460083 None:intergenic 10.0%
!! CTACTAAAAAATATATATAA+AGG + chr8_1:51460221-51460240 None:intergenic 10.0%
!! AATGCTATTAAAATTAAGTA+AGG + chr8_1:51457323-51457342 None:intergenic 15.0%
!! AAGCATAAATTAAACAAATT+TGG + chr8_1:51457395-51457414 None:intergenic 15.0%
!!! AATTTTTGCGATATTTTTTT+CGG + chr8_1:51457479-51457498 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG + chr8_1:51457514-51457533 None:intergenic 15.0%
!!! AAACAAAATTTATTTTAGCA+TGG - chr8_1:51457674-51457693 Msa1199400:intron 15.0%
!!! AATAACATATTTCTATTTCA+AGG + chr8_1:51458651-51458670 None:intergenic 15.0%
!!! ATAGAAATATGTTATTTCAT+TGG - chr8_1:51458655-51458674 Msa1199400:intron 15.0%
!!! CAATGAAAAATTCTTTATTT+TGG + chr8_1:51460065-51460084 None:intergenic 15.0%
!!! CAAAATAAAGAATTTTTCAT+TGG - chr8_1:51460063-51460082 Msa1199400:five_prime_UTR 15.0%
!! ATAAAAAAAAATTCCAAACA+AGG + chr8_1:51460414-51460433 None:intergenic 15.0%
!!! AATTACTATGAGCTTTATTA+GGG - chr8_1:51457155-51457174 Msa1199400:CDS 20.0%
!!! TATTGGGTTAATTATGTTTT+TGG + chr8_1:51457794-51457813 None:intergenic 20.0%
!!! CAAACCAATCTAATATTTTT+AGG + chr8_1:51458284-51458303 None:intergenic 20.0%
!!! CTAAAAATATTAGATTGGTT+TGG - chr8_1:51458282-51458301 Msa1199400:intron 20.0%
!! ATTCATAGATATATTACCTT+TGG - chr8_1:51458483-51458502 Msa1199400:intron 20.0%
!! AGTAAAATATGCACTTTATA+AGG + chr8_1:51458716-51458735 None:intergenic 20.0%
!! ATTAACATGATTCTATTTCA+AGG + chr8_1:51458749-51458768 None:intergenic 20.0%
!! ATGATTAAAATATGCAAGAA+GGG + chr8_1:51458831-51458850 None:intergenic 20.0%
!! AATGATTAAAATATGCAAGA+AGG + chr8_1:51458832-51458851 None:intergenic 20.0%
!!! GCATATTTTAATCATTTGAT+TGG - chr8_1:51458836-51458855 Msa1199400:intron 20.0%
!! AAATTCATGTAAAACAAGAT+TGG - chr8_1:51459498-51459517 Msa1199400:CDS 20.0%
!!! TGATGTTTCTTTTTTATGTA+TGG - chr8_1:51459676-51459695 Msa1199400:CDS 20.0%
!! ATCACAATCATTTAGTAAAA+TGG + chr8_1:51459781-51459800 None:intergenic 20.0%
!! AGTAATGTATTATTGTGATT+TGG - chr8_1:51460256-51460275 Msa1199400:five_prime_UTR 20.0%
!! GTAATGTATTATTGTGATTT+GGG - chr8_1:51460257-51460276 Msa1199400:five_prime_UTR 20.0%
!! GACATAATTTCAAGATATAA+TGG + chr8_1:51460450-51460469 None:intergenic 20.0%
! TAAAATCCAAAATCGTTTCT+CGG + chr8_1:51456150-51456169 None:intergenic 25.0%
!! AAAACGATGATTCAATTTTG+GGG + chr8_1:51456250-51456269 None:intergenic 25.0%
!! GAAAACGATGATTCAATTTT+GGG + chr8_1:51456251-51456270 None:intergenic 25.0%
!! TGAAAACGATGATTCAATTT+TGG + chr8_1:51456252-51456271 None:intergenic 25.0%
! TGATCAAATATTTCCTCAAA+AGG - chr8_1:51456643-51456662 Msa1199400:CDS 25.0%
! GTGAAATTAATTAACTACCT+GGG + chr8_1:51456743-51456762 None:intergenic 25.0%
! TGTGAAATTAATTAACTACC+TGG + chr8_1:51456744-51456763 None:intergenic 25.0%
! GATTTATCTTATCTCCAAAA+CGG - chr8_1:51456840-51456859 Msa1199400:CDS 25.0%
! TCAACAGAATAATCAAATTG+TGG - chr8_1:51456977-51456996 Msa1199400:CDS 25.0%
! CAACAGAATAATCAAATTGT+GGG - chr8_1:51456978-51456997 Msa1199400:CDS 25.0%
! AACAGAATAATCAAATTGTG+GGG - chr8_1:51456979-51456998 Msa1199400:CDS 25.0%
!!! GAATTACTATGAGCTTTATT+AGG - chr8_1:51457154-51457173 Msa1199400:CDS 25.0%
!!! TAAGTTAGCATTTTGATATG+TGG - chr8_1:51457185-51457204 Msa1199400:CDS 25.0%
! AAACAAATTTGGATTGAGTA+AGG + chr8_1:51457384-51457403 None:intergenic 25.0%
! GTGTTAAGAACGTTATTAAA+AGG - chr8_1:51457449-51457468 Msa1199400:CDS 25.0%
! ATGCTCGGTATTTAATTATT+GGG + chr8_1:51457810-51457829 None:intergenic 25.0%
!! AGGGTTATTAGAGTAAATTT+TGG - chr8_1:51457872-51457891 Msa1199400:intron 25.0%
!! GGGTTATTAGAGTAAATTTT+GGG - chr8_1:51457873-51457892 Msa1199400:intron 25.0%
! CAATAACATATGCAAATATG+AGG - chr8_1:51457934-51457953 Msa1199400:intron 25.0%
!!! TTACATGTGTTTGTTGTTAT+GGG + chr8_1:51457966-51457985 None:intergenic 25.0%
!!! TTTACATGTGTTTGTTGTTA+TGG + chr8_1:51457967-51457986 None:intergenic 25.0%
! ATAACAACAAACACATGTAA+AGG - chr8_1:51457966-51457985 Msa1199400:intron 25.0%
!!! AATCTAATATTTTTAGGTGC+AGG + chr8_1:51458278-51458297 None:intergenic 25.0%
! TGCACCTAAAAATATTAGAT+TGG - chr8_1:51458277-51458296 Msa1199400:intron 25.0%
!! AATTTTGAATGCACATGTAT+AGG - chr8_1:51458620-51458639 Msa1199400:intron 25.0%
!! ATTTTGAATGCACATGTATA+GGG - chr8_1:51458621-51458640 Msa1199400:intron 25.0%
! AATATGCACTTTATAAGGTA+AGG + chr8_1:51458711-51458730 None:intergenic 25.0%
!! AAAACAGCAAATCTCATTTT+GGG + chr8_1:51458789-51458808 None:intergenic 25.0%
!! AAAAACAGCAAATCTCATTT+TGG + chr8_1:51458790-51458809 None:intergenic 25.0%
! AATGTATTCACAATGAAAAC+AGG + chr8_1:51458874-51458893 None:intergenic 25.0%
!! ACATTTTTAACAAGCTCTTT+TGG - chr8_1:51458889-51458908 Msa1199400:intron 25.0%
! AAATACCTTACAGATTACAT+AGG + chr8_1:51458939-51458958 None:intergenic 25.0%
!! AATCTGTAAGGTATTTCAAA+AGG - chr8_1:51458943-51458962 Msa1199400:intron 25.0%
!!! TTGTTTTACATGAATTTGCA+GGG + chr8_1:51459495-51459514 None:intergenic 25.0%
! CAAGAAAACAAAAAAACACA+AGG + chr8_1:51459647-51459666 None:intergenic 25.0%
! AAAATGGCATTAACATTATG+AGG + chr8_1:51459765-51459784 None:intergenic 25.0%
!! CTGAATACTGACATTATTTT+TGG - chr8_1:51459834-51459853 Msa1199400:intron 25.0%
! TAAAGACACATTGTTTGAAT+TGG - chr8_1:51460191-51460210 Msa1199400:five_prime_UTR 25.0%
! AAAGACACATTGTTTGAATT+GGG - chr8_1:51460192-51460211 Msa1199400:five_prime_UTR 25.0%
!!! TTTTCTGAGACAATTATCAA+AGG + chr8_1:51460290-51460309 None:intergenic 25.0%
! GAAAAAATGTATGCACAAAT+CGG + chr8_1:51460382-51460401 None:intergenic 25.0%
AAAATCCAAAATCGTTTCTC+GGG + chr8_1:51456149-51456168 None:intergenic 30.0%
! GAGAAACGATTTTGGATTTT+AGG - chr8_1:51456149-51456168 Msa1199400:three_prime_UTR 30.0%
GGAGATTGAATGATTTCAAT+CGG + chr8_1:51456193-51456212 None:intergenic 30.0%
!! ATTTTGGGGGAAAAATTCAT+CGG + chr8_1:51456236-51456255 None:intergenic 30.0%
! AAACGATGATTCAATTTTGG+GGG + chr8_1:51456249-51456268 None:intergenic 30.0%
CAAGGTTCATAAAGTATGAA+CGG + chr8_1:51456286-51456305 None:intergenic 30.0%
!!! CAATTTTTTTTTGACGACTG+AGG - chr8_1:51456491-51456510 Msa1199400:three_prime_UTR 30.0%
!! ATTGATTTGATTCGATTCGA+TGG - chr8_1:51456569-51456588 Msa1199400:CDS 30.0%
AAAACCCTGATATTTCATAC+TGG - chr8_1:51457008-51457027 Msa1199400:CDS 30.0%
CTTTCCAGTATGAAATATCA+GGG + chr8_1:51457015-51457034 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG + chr8_1:51457751-51457770 None:intergenic 30.0%
!!! GAGTGCAGAAATTTTTTGTA+GGG + chr8_1:51457352-51457371 None:intergenic 30.0%
!!! TGAGTGCAGAAATTTTTTGT+AGG + chr8_1:51457353-51457372 None:intergenic 30.0%
!!! TTTTGCGATATTTTTTTCGG+AGG + chr8_1:51457476-51457495 None:intergenic 30.0%
! CTAGTTTAGAACACTATGAA+AGG + chr8_1:51457611-51457630 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr8_1:51457751-51457770 Msa1199400:intron 30.0%
CATGCTCGGTATTTAATTAT+TGG + chr8_1:51457811-51457830 None:intergenic 30.0%
! TAACCCTGATTCAAGTTATT+TGG + chr8_1:51457859-51457878 None:intergenic 30.0%
!! AATATTAGATTGGTTTGGTG+TGG - chr8_1:51458287-51458306 Msa1199400:intron 30.0%
!! ACTCTTAGTGTTGATACTAT+TGG - chr8_1:51458402-51458421 Msa1199400:intron 30.0%
!!! GCATTTTAAAGTTTGAAGTG+TGG - chr8_1:51458566-51458585 Msa1199400:intron 30.0%
! TTTTGAATGCACATGTATAG+GGG - chr8_1:51458622-51458641 Msa1199400:intron 30.0%
!!! CTGTTTTTACATGATGAAGT+TGG - chr8_1:51458802-51458821 Msa1199400:intron 30.0%
TATTCACAATGAAAACAGGA+CGG + chr8_1:51458870-51458889 None:intergenic 30.0%
! GGTTTGTCTTTTTAAATCAC+AGG - chr8_1:51458910-51458929 Msa1199400:intron 30.0%
! TGTAAGGTATTTCAAAAGGA+AGG - chr8_1:51458947-51458966 Msa1199400:intron 30.0%
ATATGGGAAACCATTTAATG+AGG - chr8_1:51458994-51459013 Msa1199400:intron 30.0%
ACAAAACTATTAGATGTCAC+AGG + chr8_1:51459085-51459104 None:intergenic 30.0%
AACCATTATATCCAATAGCA+TGG + chr8_1:51459126-51459145 None:intergenic 30.0%
CTATTTGACATGAATTTGCA+GGG + chr8_1:51459285-51459304 None:intergenic 30.0%
CTGTTTGACATGAATTTGAA+GGG + chr8_1:51459369-51459388 None:intergenic 30.0%
CTTCAAATTCATGTCAAACA+GGG - chr8_1:51459368-51459387 Msa1199400:intron 30.0%
!!! CTTGTTTTACATGAATTTGC+AGG + chr8_1:51459496-51459515 None:intergenic 30.0%
GATGATATGAATTATCCACA+GGG + chr8_1:51459537-51459556 None:intergenic 30.0%
TGATGATATGAATTATCCAC+AGG + chr8_1:51459538-51459557 None:intergenic 30.0%
! TTAGTGTTTTCTACTCTTGT+AGG - chr8_1:51459701-51459720 Msa1199400:CDS 30.0%
!!! CTATCAACTGACTTTTTTGA+TGG - chr8_1:51459882-51459901 Msa1199400:CDS 30.0%
!!! AACTGACTTTTTTGATGGTT+TGG - chr8_1:51459887-51459906 Msa1199400:CDS 30.0%
!!! ACTGACTTTTTTGATGGTTT+GGG - chr8_1:51459888-51459907 Msa1199400:CDS 30.0%
! GAATTTTTCATTGGTCCTTT+TGG - chr8_1:51460072-51460091 Msa1199400:five_prime_UTR 30.0%
TCAGAAAATATCATGCCAAA+AGG + chr8_1:51460090-51460109 None:intergenic 30.0%
TGAGACAATTATCAAAGGAA+AGG + chr8_1:51460285-51460304 None:intergenic 30.0%
!! TTTCACTTTAGAACCTTGTT+TGG - chr8_1:51460398-51460417 Msa1199400:five_prime_UTR 30.0%
CGTTCATACTTTATGAACCT+TGG - chr8_1:51456284-51456303 Msa1199400:three_prime_UTR 35.0%
TCAAAAACTTCTTTCGTCAC+TGG - chr8_1:51456324-51456343 Msa1199400:three_prime_UTR 35.0%
AATTACAGAATTCAACACCG+AGG + chr8_1:51456544-51456563 None:intergenic 35.0%
TTGATCAATTCAACTCCAGT+TGG + chr8_1:51456630-51456649 None:intergenic 35.0%
TTTCCTCAAAAGGAAAGTGA+TGG - chr8_1:51456653-51456672 Msa1199400:CDS 35.0%
TTCCTCAAAAGGAAAGTGAT+GGG - chr8_1:51456654-51456673 Msa1199400:CDS 35.0%
ACATATACAAATACGCACCT+TGG - chr8_1:51456712-51456731 Msa1199400:CDS 35.0%
CATATACAAATACGCACCTT+GGG - chr8_1:51456713-51456732 Msa1199400:CDS 35.0%
TTATCTCCAAAACGGTGATT+TGG - chr8_1:51456848-51456867 Msa1199400:CDS 35.0%
CCTTTCCAGTATGAAATATC+AGG + chr8_1:51457016-51457035 None:intergenic 35.0%
CCTGATATTTCATACTGGAA+AGG - chr8_1:51457013-51457032 Msa1199400:CDS 35.0%
ATTGGGTTATGCATGAGTAT+AGG - chr8_1:51457057-51457076 Msa1199400:CDS 35.0%
TGAGTATAGGCTTGAAGATA+AGG - chr8_1:51457070-51457089 Msa1199400:CDS 35.0%
GATAAGGATTTGACTGATAG+AGG - chr8_1:51457086-51457105 Msa1199400:CDS 35.0%
!! CATTTTGATATGTGGTAGCA+GGG - chr8_1:51457193-51457212 Msa1199400:CDS 35.0%
!! ATTTTGATATGTGGTAGCAG+GGG - chr8_1:51457194-51457213 Msa1199400:CDS 35.0%
! TACAAGGTCGCAATTTTGTA+GGG + chr8_1:51457767-51457786 None:intergenic 35.0%
! TTACAAGGTCGCAATTTTGT+AGG + chr8_1:51457766-51457785 None:intergenic 35.0%
! TTACAAGGTCGCAATTTTGT+AGG - chr8_1:51457766-51457785 Msa1199400:intron 35.0%
! TACAAGGTCGCAATTTTGTA+GGG - chr8_1:51457767-51457786 Msa1199400:intron 35.0%
AGTGCCAAATAACTTGAATC+AGG - chr8_1:51457852-51457871 Msa1199400:intron 35.0%
GTGCCAAATAACTTGAATCA+GGG - chr8_1:51457853-51457872 Msa1199400:intron 35.0%
AGGAACTAAATGAACAAGAG+TGG - chr8_1:51457986-51458005 Msa1199400:intron 35.0%
! AGTTCCTTCTCTTGTTGTAT+GGG + chr8_1:51458029-51458048 None:intergenic 35.0%
! TAGTTCCTTCTCTTGTTGTA+TGG + chr8_1:51458030-51458049 None:intergenic 35.0%
!!! TTTTTAGGTGCAGGTAAGAA+AGG + chr8_1:51458269-51458288 None:intergenic 35.0%
AACTTCAAAACTACCACACA+GGG + chr8_1:51458345-51458364 None:intergenic 35.0%
TTATGTGCATCCACAATCAA+AGG + chr8_1:51458371-51458390 None:intergenic 35.0%
AATGCCATTAGTGACATAGT+AGG + chr8_1:51458523-51458542 None:intergenic 35.0%
TACTATGTCACTAATGGCAT+TGG - chr8_1:51458522-51458541 Msa1199400:intron 35.0%
GGATTCCTATGTAATCTGTA+AGG - chr8_1:51458931-51458950 Msa1199400:intron 35.0%
AACCATTTAATGAGGAAGAC+TGG - chr8_1:51459002-51459021 Msa1199400:intron 35.0%
CTCCATGCTATTGGATATAA+TGG - chr8_1:51459121-51459140 Msa1199400:intron 35.0%
!! TTGACATGAATTTGCTGGAT+CGG + chr8_1:51459188-51459207 None:intergenic 35.0%
TGTCAAACAGGATTACAAAC+AGG - chr8_1:51459202-51459221 Msa1199400:intron 35.0%
CTGTTTGACATGAATTTGCA+GGG + chr8_1:51459246-51459265 None:intergenic 35.0%
CCTATTTGACATGAATTTGC+AGG + chr8_1:51459286-51459305 None:intergenic 35.0%
CCTGCAAATTCATGTCAAAT+AGG - chr8_1:51459283-51459302 Msa1199400:intron 35.0%
CTGTTTGACATGAATTCACA+GGG + chr8_1:51459327-51459346 None:intergenic 35.0%
TTGACATGAATTTGAAGGGT+CGG + chr8_1:51459365-51459384 None:intergenic 35.0%
CCTGTTTGACATGAATTTGA+AGG + chr8_1:51459370-51459389 None:intergenic 35.0%
CCTTCAAATTCATGTCAAAC+AGG - chr8_1:51459367-51459386 Msa1199400:intron 35.0%
TTGACATTCATTTGCAGGAT+CGG + chr8_1:51459407-51459426 None:intergenic 35.0%
CCTATTTGACATTCATTTGC+AGG + chr8_1:51459412-51459431 None:intergenic 35.0%
CCTGCAAATGAATGTCAAAT+AGG - chr8_1:51459409-51459428 Msa1199400:intron 35.0%
AAATTCACGTCAAACAGGAT+TGG - chr8_1:51459453-51459472 Msa1199400:intron 35.0%
ATATGAATTATCCACAGGGT+CGG + chr8_1:51459533-51459552 None:intergenic 35.0%
AGCGACTCTTGATTTCTTTA+AGG - chr8_1:51459807-51459826 Msa1199400:intron 35.0%
!!! TACTGACATTATTTTTGGCC+AGG - chr8_1:51459839-51459858 Msa1199400:intron 35.0%
!! AATGCTGACTTTAGCACATA+CGG - chr8_1:51459942-51459961 Msa1199400:CDS 35.0%
!!! CTTTATTTTGGGTCCAACTT+AGG + chr8_1:51460053-51460072 None:intergenic 35.0%
! GCAATAGTGCCAAAGTATTA+AGG + chr8_1:51460127-51460146 None:intergenic 35.0%
AAAGTATGAACGGTGACGAA+CGG + chr8_1:51456276-51456295 None:intergenic 40.0%
TTATGAACCTTGGCAAGCTT+TGG - chr8_1:51456294-51456313 Msa1199400:three_prime_UTR 40.0%
TTCGATGGCTATACCGAAAT+TGG - chr8_1:51456584-51456603 Msa1199400:CDS 40.0%
TCCTCAAAAGGAAAGTGATG+GGG - chr8_1:51456655-51456674 Msa1199400:CDS 40.0%
TGGTATTTCTTCTGTCCGAT+AGG - chr8_1:51456873-51456892 Msa1199400:intron 40.0%
GGTATTTCTTCTGTCCGATA+GGG - chr8_1:51456874-51456893 Msa1199400:intron 40.0%
CTTCCATACTTCTTCCCTAT+CGG + chr8_1:51456891-51456910 None:intergenic 40.0%
! ATAGGGAAGAAGTATGGAAG+TGG - chr8_1:51456891-51456910 Msa1199400:intron 40.0%
! TAGGGAAGAAGTATGGAAGT+GGG - chr8_1:51456892-51456911 Msa1199400:intron 40.0%
ATGAATCGATCTACGGAAAC+AGG - chr8_1:51456921-51456940 Msa1199400:intron 40.0%
TGAATCGATCTACGGAAACA+GGG - chr8_1:51456922-51456941 Msa1199400:intron 40.0%
!!! GTTTTGGAAAGCTACTGGTA+AGG - chr8_1:51456944-51456963 Msa1199400:intron 40.0%
GACTGATAGAGGAATTGTTC+AGG - chr8_1:51457097-51457116 Msa1199400:CDS 40.0%
!! GCATTTTGATATGTGGTAGC+AGG - chr8_1:51457192-51457211 Msa1199400:CDS 40.0%
AGTTGTGCCTCACCAATATT+GGG + chr8_1:51457232-51457251 None:intergenic 40.0%
AAGTTGTGCCTCACCAATAT+TGG + chr8_1:51457233-51457252 None:intergenic 40.0%
!! GTGTTTGTTGTTATGGGCTT+GGG + chr8_1:51457960-51457979 None:intergenic 40.0%
!! TGTGTTTGTTGTTATGGGCT+TGG + chr8_1:51457961-51457980 None:intergenic 40.0%
! TTCCTTCTCTTGTTGTATGG+GGG + chr8_1:51458027-51458046 None:intergenic 40.0%
! GTTCCTTCTCTTGTTGTATG+GGG + chr8_1:51458028-51458047 None:intergenic 40.0%
CCTTGTCTGTGAGTTTAGTT+CGG + chr8_1:51458181-51458200 None:intergenic 40.0%
GGAAAAGTCTTTGTAGATGC+AGG + chr8_1:51458248-51458267 None:intergenic 40.0%
ACTTCAAAACTACCACACAG+GGG + chr8_1:51458344-51458363 None:intergenic 40.0%
CAACTTCAAAACTACCACAC+AGG + chr8_1:51458346-51458365 None:intergenic 40.0%
TGAAGTTGTGCCTTTGATTG+TGG - chr8_1:51458358-51458377 Msa1199400:intron 40.0%
TCCACCTACTATGTCACTAA+TGG - chr8_1:51458516-51458535 Msa1199400:intron 40.0%
GTATTTCAAAAGGAAGGTCC+TGG - chr8_1:51458953-51458972 Msa1199400:intron 40.0%
CTCCAGTCTTCCTCATTAAA+TGG + chr8_1:51459007-51459026 None:intergenic 40.0%
TTAGATGTCACAGGCAAAGT+GGG + chr8_1:51459076-51459095 None:intergenic 40.0%
ATTAGATGTCACAGGCAAAG+TGG + chr8_1:51459077-51459096 None:intergenic 40.0%
ATCCAATAGCATGGAGATTC+TGG + chr8_1:51459117-51459136 None:intergenic 40.0%
ATATCCATGCCAAGTCAATC+AGG - chr8_1:51459148-51459167 Msa1199400:intron 40.0%
!! TGACATGAATTTGCTGGATC+GGG + chr8_1:51459187-51459206 None:intergenic 40.0%
CCTGTTTGACATGAATTTGC+TGG + chr8_1:51459193-51459212 None:intergenic 40.0%
CCAGCAAATTCATGTCAAAC+AGG - chr8_1:51459190-51459209 Msa1199400:intron 40.0%
TTGACATGAATTTGCAGGGT+CGG + chr8_1:51459242-51459261 None:intergenic 40.0%
CCTGTTTGACATGAATTTGC+AGG + chr8_1:51459193-51459212 None:intergenic 40.0%
CCTGCAAATTCATGTCAAAC+AGG - chr8_1:51459244-51459263 Msa1199400:intron 40.0%
TGACATGAATTTGCAGGGTA+GGG + chr8_1:51459280-51459299 None:intergenic 40.0%
TTGACATGAATTTGCAGGGT+AGG + chr8_1:51459242-51459261 None:intergenic 40.0%
CCTGTTTGACATGAATTCAC+AGG + chr8_1:51459328-51459347 None:intergenic 40.0%
CCTGTGAATTCATGTCAAAC+AGG - chr8_1:51459325-51459344 Msa1199400:intron 40.0%
TGACATGAATTTGAAGGGTC+GGG + chr8_1:51459364-51459383 None:intergenic 40.0%
TGACATTCATTTGCAGGATC+GGG + chr8_1:51459406-51459425 None:intergenic 40.0%
CTGTTTGACGTGAATTTGCA+GGG + chr8_1:51459450-51459469 None:intergenic 40.0%
TATGAATTATCCACAGGGTC+GGG + chr8_1:51459532-51459551 None:intergenic 40.0%
GAAACAGATTAGCATACCTC+AGG + chr8_1:51459619-51459638 None:intergenic 40.0%
ATGTGCTAAAGTCAGCATTC+TGG + chr8_1:51459941-51459960 None:intergenic 40.0%
TGACTTTAGCACATACGGAA+TGG - chr8_1:51459947-51459966 Msa1199400:CDS 40.0%
GGATGACTACTTGGATTTCA+TGG - chr8_1:51459980-51459999 Msa1199400:CDS 40.0%
! GATTTGGTCATTGGCACATA+TGG - chr8_1:51460167-51460186 Msa1199400:five_prime_UTR 40.0%
! AGCAACCCGAGAAACGATTT+TGG - chr8_1:51456141-51456160 Msa1199400:three_prime_UTR 45.0%
TCAATCTCCTCCTCCGAATT+AGG - chr8_1:51456204-51456223 Msa1199400:three_prime_UTR 45.0%
CAATCTCCTCCTCCGAATTA+GGG - chr8_1:51456205-51456224 Msa1199400:three_prime_UTR 45.0%
TTGGGGGAAAAATTCATCGG+CGG + chr8_1:51456233-51456252 None:intergenic 45.0%
AAGAACACCAAAGCTTGCCA+AGG + chr8_1:51456304-51456323 None:intergenic 45.0%
GTCACTGGACTTGATCACTA+GGG - chr8_1:51456339-51456358 Msa1199400:three_prime_UTR 45.0%
GCTACGACAACAAACAACCT+CGG - chr8_1:51456524-51456543 Msa1199400:exon 45.0%
! GGCTATACCGAAATTGGTTC+CGG - chr8_1:51456590-51456609 Msa1199400:CDS 45.0%
! GCTATACCGAAATTGGTTCC+GGG - chr8_1:51456591-51456610 Msa1199400:CDS 45.0%
! CTATACCGAAATTGGTTCCG+GGG - chr8_1:51456592-51456611 Msa1199400:CDS 45.0%
! TCCCCATCACTTTCCTTTTG+AGG + chr8_1:51456659-51456678 None:intergenic 45.0%
! TCCAAAACGGTGATTTGGAG+TGG - chr8_1:51456853-51456872 Msa1199400:CDS 45.0%
! ACCACTCCAAATCACCGTTT+TGG + chr8_1:51456857-51456876 None:intergenic 45.0%
TGTCCGATAGGGAAGAAGTA+TGG - chr8_1:51456885-51456904 Msa1199400:intron 45.0%
GTCGAGGATGAATCGATCTA+CGG - chr8_1:51456914-51456933 Msa1199400:intron 45.0%
! GATCTACGGAAACAGGGTTT+TGG - chr8_1:51456928-51456947 Msa1199400:intron 45.0%
!!! ACAGGGTTTTGGAAAGCTAC+TGG - chr8_1:51456939-51456958 Msa1199400:intron 45.0%
AGCGGTAGTTAACTCATGCT+CGG + chr8_1:51457825-51457844 None:intergenic 45.0%
TATTTGGCACTCGTTGCAAG+CGG + chr8_1:51457843-51457862 None:intergenic 45.0%
! TCCTTCTCTTGTTGTATGGG+GGG + chr8_1:51458026-51458045 None:intergenic 45.0%
!! TTTTGGTGTATGACCAGCTG+CGG + chr8_1:51458077-51458096 None:intergenic 45.0%
! TGTGAGTTTAGTTCGGCTAC+TGG + chr8_1:51458174-51458193 None:intergenic 45.0%
CCGAACTAAACTCACAGACA+AGG - chr8_1:51458178-51458197 Msa1199400:intron 45.0%
CTACTGCTTAAAGCAGCTGA+TGG - chr8_1:51458202-51458221 Msa1199400:intron 45.0%
GGTGGAGACATAAAAGCCAA+AGG + chr8_1:51458502-51458521 None:intergenic 45.0%
GCCATTAGTGACATAGTAGG+TGG + chr8_1:51458520-51458539 None:intergenic 45.0%
! GCATTGGCCTCTTCTAAATG+CGG - chr8_1:51458538-51458557 Msa1199400:intron 45.0%
! CATTGGCCTCTTCTAAATGC+GGG - chr8_1:51458539-51458558 Msa1199400:intron 45.0%
! ATTGGCCTCTTCTAAATGCG+GGG - chr8_1:51458540-51458559 Msa1199400:intron 45.0%
CCATATTGTGCACCATTCCT+GGG + chr8_1:51458980-51458999 None:intergenic 45.0%
CCAGGAATGGTGCACAATAT+GGG - chr8_1:51458978-51458997 Msa1199400:intron 45.0%
! GACTGGAGTGATGATGAAGT+AGG - chr8_1:51459019-51459038 Msa1199400:intron 45.0%
GACCAGAATCTCCATGCTAT+TGG - chr8_1:51459112-51459131 Msa1199400:intron 45.0%
!! CAATCCTGATTGACTTGGCA+TGG + chr8_1:51459155-51459174 None:intergenic 45.0%
GGCATCAATCCTGATTGACT+TGG + chr8_1:51459160-51459179 None:intergenic 45.0%
TGACATGAATTTGCAGGGTC+GGG + chr8_1:51459241-51459260 None:intergenic 45.0%
GAATTCACAGGGTCTACAGA+AGG + chr8_1:51459316-51459335 None:intergenic 45.0%
TTGACGTGAATTTGCAGGGT+CGG + chr8_1:51459446-51459465 None:intergenic 45.0%
CCTGTTTGACGTGAATTTGC+AGG + chr8_1:51459451-51459470 None:intergenic 45.0%
CCTGCAAATTCACGTCAAAC+AGG - chr8_1:51459448-51459467 Msa1199400:intron 45.0%
AGGAGACAATGCAAACTGCA+GGG + chr8_1:51459745-51459764 None:intergenic 45.0%
! CACCTTCAGCATTGTTTTCC+TGG + chr8_1:51459860-51459879 None:intergenic 45.0%
!! TTTTGATGGTTTGGGAGACC+TGG - chr8_1:51459896-51459915 Msa1199400:CDS 45.0%
ATCTAGACTCCGAGATGTTC+TGG - chr8_1:51460012-51460031 Msa1199400:five_prime_UTR 45.0%
! ATTTTCTGACGACTGAGCGT+CGG - chr8_1:51460101-51460120 Msa1199400:five_prime_UTR 45.0%
CCAATGACCAAATCACCTTC+TGG + chr8_1:51460161-51460180 None:intergenic 45.0%
!! CCAGAAGGTGATTTGGTCAT+TGG - chr8_1:51460158-51460177 Msa1199400:five_prime_UTR 45.0%
ATCGTGAATGAACACGCTCT+TGG - chr8_1:51460309-51460328 Msa1199400:five_prime_UTR 45.0%
TCATCGGCGGAACCCTAATT+CGG + chr8_1:51456220-51456239 None:intergenic 50.0%
CGTCACTGGACTTGATCACT+AGG - chr8_1:51456338-51456357 Msa1199400:three_prime_UTR 50.0%
CGAAACCCCGGAACCAATTT+CGG + chr8_1:51456600-51456619 None:intergenic 50.0%
GTTGGAGAGAATCGAAACCC+CGG + chr8_1:51456612-51456631 None:intergenic 50.0%
GGGTTTCGATTCTCTCCAAC+TGG - chr8_1:51456612-51456631 Msa1199400:CDS 50.0%
TAACTACCTGGGAGATCCCA+AGG + chr8_1:51456732-51456751 None:intergenic 50.0%
! AGAAGTATGGAAGTGGGTCG+AGG - chr8_1:51456898-51456917 Msa1199400:intron 50.0%
!! ATACTGGAAAGGCACCTCGT+GGG - chr8_1:51457024-51457043 Msa1199400:CDS 50.0%
!! TCGTGGGGATCGTACTGATT+GGG - chr8_1:51457040-51457059 Msa1199400:CDS 50.0%
TTGATATGTGGTAGCAGGGG+CGG - chr8_1:51457197-51457216 Msa1199400:CDS 50.0%
CTCACCAATATTGGGAGTCC+AGG + chr8_1:51457224-51457243 None:intergenic 50.0%
CTGGACTCCCAATATTGGTG+AGG - chr8_1:51457222-51457241 Msa1199400:CDS 50.0%
AACAAGAGTGGTTGTGCTGC+TGG - chr8_1:51457998-51458017 Msa1199400:intron 50.0%
ACCCCCCATACAACAAGAGA+AGG - chr8_1:51458022-51458041 Msa1199400:intron 50.0%
!!! TCGGCTACTGGTGCTGTTTT+GGG + chr8_1:51458162-51458181 None:intergenic 50.0%
!!! TTCGGCTACTGGTGCTGTTT+TGG + chr8_1:51458163-51458182 None:intergenic 50.0%
TCAAAACTACCACACAGGGG+CGG + chr8_1:51458341-51458360 None:intergenic 50.0%
TTGGCCTCTTCTAAATGCGG+GGG - chr8_1:51458541-51458560 Msa1199400:intron 50.0%
CCCAGGAATGGTGCACAATA+TGG - chr8_1:51458977-51458996 Msa1199400:intron 50.0%
CCCATATTGTGCACCATTCC+TGG + chr8_1:51458981-51459000 None:intergenic 50.0%
!! GAATTTGCTGGATCGGGAGA+AGG + chr8_1:51459181-51459200 None:intergenic 50.0%
GAATTTGCAGGGTAGGGAGA+AGG + chr8_1:51459274-51459293 None:intergenic 50.0%
GAATTTGAAGGGTCGGGAGA+CGG + chr8_1:51459358-51459377 None:intergenic 50.0%
TCATTTGCAGGATCGGGAGA+CGG + chr8_1:51459400-51459419 None:intergenic 50.0%
TGACGTGAATTTGCAGGGTC+GGG + chr8_1:51459445-51459464 None:intergenic 50.0%
CATGAATTTGCAGGGCCAGT+GGG + chr8_1:51459487-51459506 None:intergenic 50.0%
ACATGAATTTGCAGGGCCAG+TGG + chr8_1:51459488-51459507 None:intergenic 50.0%
GGAGACAATGCAAACTGCAG+GGG + chr8_1:51459744-51459763 None:intergenic 50.0%
GAGGAGACAATGCAAACTGC+AGG + chr8_1:51459746-51459765 None:intergenic 50.0%
GGCCAGGAAAACAATGCTGA+AGG - chr8_1:51459855-51459874 Msa1199400:CDS 50.0%
TTTGGGAGACCTGGATTGCT+TGG - chr8_1:51459905-51459924 Msa1199400:CDS 50.0%
TTGGGAGACCTGGATTGCTT+GGG - chr8_1:51459906-51459925 Msa1199400:CDS 50.0%
AAGTCAGCATTCTGGCCAAC+AGG + chr8_1:51459933-51459952 None:intergenic 50.0%
CACATACGGAATGGCTCCTA+CGG - chr8_1:51459956-51459975 Msa1199400:CDS 50.0%
ACATACGGAATGGCTCCTAC+GGG - chr8_1:51459957-51459976 Msa1199400:CDS 50.0%
AGCACTCTGCCAGAACATCT+CGG + chr8_1:51460024-51460043 None:intergenic 50.0%
!! GAGCGTCGGCCTTAATACTT+TGG - chr8_1:51460115-51460134 Msa1199400:five_prime_UTR 50.0%
GTGAATGAACACGCTCTTGG+TGG - chr8_1:51460312-51460331 Msa1199400:five_prime_UTR 50.0%
!! CATACTGGAAAGGCACCTCG+TGG - chr8_1:51457023-51457042 Msa1199400:CDS 55.0%
!! TACTGGAAAGGCACCTCGTG+GGG - chr8_1:51457025-51457044 Msa1199400:CDS 55.0%
CAATCAGTACGATCCCCACG+AGG + chr8_1:51457041-51457060 None:intergenic 55.0%
! CTCGTGGGGATCGTACTGAT+TGG - chr8_1:51457039-51457058 Msa1199400:CDS 55.0%
CGGACCTGGACTCCCAATAT+TGG - chr8_1:51457217-51457236 Msa1199400:CDS 55.0%
!! GCGGCTGTTATTGCTGGTTC+TGG + chr8_1:51458058-51458077 None:intergenic 55.0%
!! AGCTTGGGTGCTGTGGCTTT+TGG + chr8_1:51458094-51458113 None:intergenic 55.0%
! CGCTTTTGCTGCAGCAGCTT+GGG + chr8_1:51458109-51458128 None:intergenic 55.0%
!!! CGGCTACTGGTGCTGTTTTG+GGG + chr8_1:51458161-51458180 None:intergenic 55.0%
GCAACCCCCGCATTTAGAAG+AGG + chr8_1:51458548-51458567 None:intergenic 55.0%
AAAAGGAAGGTCCTGGTCCC+AGG - chr8_1:51458960-51458979 Msa1199400:intron 55.0%
! AGTGCAGCTGGCTCAGCAAA+TGG + chr8_1:51459049-51459068 None:intergenic 55.0%
AAAGTGGGAGCTAGTGCAGC+TGG + chr8_1:51459061-51459080 None:intergenic 55.0%
GAATTTGCAGGGTCGGGAGA+AGG + chr8_1:51459235-51459254 None:intergenic 55.0%
TTATCCACAGGGTCGGGAGA+AGG + chr8_1:51459526-51459545 None:intergenic 55.0%
CGACGACGACATATTGCCTG+AGG - chr8_1:51459600-51459619 Msa1199400:CDS 55.0%
CAACAGGTCCCAAGCAATCC+AGG + chr8_1:51459917-51459936 None:intergenic 55.0%
CTGGATTGCTTGGGACCTGT+TGG - chr8_1:51459915-51459934 Msa1199400:CDS 55.0%
CATACGGAATGGCTCCTACG+GGG - chr8_1:51459958-51459977 Msa1199400:CDS 55.0%
ATACGGAATGGCTCCTACGG+GGG - chr8_1:51459959-51459978 Msa1199400:CDS 55.0%
TCCTACGGGGGATGACTACT+TGG - chr8_1:51459971-51459990 Msa1199400:CDS 55.0%
TCCAAGTAGTCATCCCCCGT+AGG + chr8_1:51459975-51459994 None:intergenic 55.0%
!! GATGTTCTGGCAGAGTGCTG+CGG - chr8_1:51460025-51460044 Msa1199400:five_prime_UTR 55.0%
! GAGTGCTGCGGAACCTAAGT+TGG - chr8_1:51460037-51460056 Msa1199400:five_prime_UTR 55.0%
TGGCACTATTGCTGCAGTGC+TGG - chr8_1:51460135-51460154 Msa1199400:five_prime_UTR 55.0%
! GTGCTGGCCAGAAGGTGATT+TGG - chr8_1:51460151-51460170 Msa1199400:five_prime_UTR 55.0%
GCGGAACCCTAATTCGGAGG+AGG + chr8_1:51456214-51456233 None:intergenic 60.0%
TCGGCGGAACCCTAATTCGG+AGG + chr8_1:51456217-51456236 None:intergenic 60.0%
TACGCACCTTGGGATCTCCC+AGG - chr8_1:51456723-51456742 Msa1199400:intron 60.0%
CCAGCTGCGGCTGTTATTGC+TGG + chr8_1:51458064-51458083 None:intergenic 60.0%
CCAGCAATAACAGCCGCAGC+TGG - chr8_1:51458061-51458080 Msa1199400:intron 60.0%
! GCGCTTTTGCTGCAGCAGCT+TGG + chr8_1:51458110-51458129 None:intergenic 60.0%
! TTTGGGGCTGCTGGTGGGAT+GGG + chr8_1:51458145-51458164 None:intergenic 60.0%
!!! TTTTGGGGCTGCTGGTGGGA+TGG + chr8_1:51458146-51458165 None:intergenic 60.0%
!!! GCTGTTTTGGGGCTGCTGGT+GGG + chr8_1:51458150-51458169 None:intergenic 60.0%
!!! TGCTGTTTTGGGGCTGCTGG+TGG + chr8_1:51458151-51458170 None:intergenic 60.0%
!!! TGGTGCTGTTTTGGGGCTGC+TGG + chr8_1:51458154-51458173 None:intergenic 60.0%
TGCCACACCAGGACCTGTTC+AGG - chr8_1:51458314-51458333 Msa1199400:intron 60.0%
GACCTGAACAGGTCCTGGTG+TGG + chr8_1:51458319-51458338 None:intergenic 60.0%
GAAGGTCCTGGTCCCAGGAA+TGG - chr8_1:51458965-51458984 Msa1199400:intron 60.0%
TGTGCACCATTCCTGGGACC+AGG + chr8_1:51458974-51458993 None:intergenic 60.0%
TTTGCAGGGTCGGGAGAAGG+CGG + chr8_1:51459232-51459251 None:intergenic 60.0%
GGATTGGAGCTGTCTCCCAC+TGG - chr8_1:51459469-51459488 Msa1199400:intron 60.0%
!! TTGCTGCAGTGCTGGCCAGA+AGG - chr8_1:51460143-51460162 Msa1199400:five_prime_UTR 60.0%
! CTGCAGCAGCTTGGGTGCTG+TGG + chr8_1:51458101-51458120 None:intergenic 65.0%
GGTGTGGCACTTGCCACACC+AGG - chr8_1:51458303-51458322 Msa1199400:intron 65.0%
ACACAGGGGCGGACCTGAAC+AGG + chr8_1:51458330-51458349 None:intergenic 65.0%
TGTTCAGGTCCGCCCCTGTG+TGG - chr8_1:51458329-51458348 Msa1199400:intron 65.0%
TGTGGTAGCAGGGGCGGACC+TGG - chr8_1:51457203-51457222 Msa1199400:CDS 70.0%
GGGCGGACCTGAACAGGTCC+TGG + chr8_1:51458324-51458343 None:intergenic 70.0%
GGTGCCTTCTCCCGACCCTG+TGG - chr8_1:51459519-51459538 Msa1199400:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 51456126 51460472 51456126 ID=Msa1199400;Name=Msa1199400
chr8_1 mRNA 51456126 51460472 51456126 ID=Msa1199400-mRNA-1;Parent=Msa1199400;Name=Msa1199400-mRNA-1;_AED=0.06;_eAED=0.06;_QI=462|0.5|0.8|1|1|1|5|402|460
chr8_1 exon 51456126 51456737 51456126 ID=Msa1199400-mRNA-1:exon:16246;Parent=Msa1199400-mRNA-1
chr8_1 exon 51456828 51456875 51456828 ID=Msa1199400-mRNA-1:exon:16245;Parent=Msa1199400-mRNA-1
chr8_1 exon 51456977 51457666 51456977 ID=Msa1199400-mRNA-1:exon:16244;Parent=Msa1199400-mRNA-1
chr8_1 exon 51459480 51459757 51459480 ID=Msa1199400-mRNA-1:exon:16243;Parent=Msa1199400-mRNA-1
chr8_1 exon 51459854 51460472 51459854 ID=Msa1199400-mRNA-1:exon:16242;Parent=Msa1199400-mRNA-1
chr8_1 five_prime_UTR 51460011 51460472 51460011 ID=Msa1199400-mRNA-1:five_prime_utr;Parent=Msa1199400-mRNA-1
chr8_1 CDS 51459854 51460010 51459854 ID=Msa1199400-mRNA-1:cds;Parent=Msa1199400-mRNA-1
chr8_1 CDS 51459480 51459757 51459480 ID=Msa1199400-mRNA-1:cds;Parent=Msa1199400-mRNA-1
chr8_1 CDS 51456977 51457666 51456977 ID=Msa1199400-mRNA-1:cds;Parent=Msa1199400-mRNA-1
chr8_1 CDS 51456828 51456875 51456828 ID=Msa1199400-mRNA-1:cds;Parent=Msa1199400-mRNA-1
chr8_1 CDS 51456528 51456737 51456528 ID=Msa1199400-mRNA-1:cds;Parent=Msa1199400-mRNA-1
chr8_1 three_prime_UTR 51456126 51456527 51456126 ID=Msa1199400-mRNA-1:three_prime_utr;Parent=Msa1199400-mRNA-1
Gene Sequence

>Msa1199400

ATGGCTATACCGAAATTGGTTCCGGGGTTTCGATTCTCTCCAACTGGAGTTGAATTGATCAAATATTTCCTCAAAAGGAAAGTGATGGGGAAAAAGTTTCATAACGATGTCATTGCTGAACTTGACATATACAAATACGCACCTTGGGATCTCCCAGATTTATCTTATCTCCAAAACGGTGATTTGGAGTGGTATTTCTTCTGTCCGATAGGGAAGAAGTATGGAAGTGGGTCGAGGATGAATCGATCTACGGAAACAGGGTTTTGGAAAGCTACTGGTAAGGATAGAGCTGTTCAACAGAATAATCAAATTGTGGGGATGATTAAAACCCTGATATTTCATACTGGAAAGGCACCTCGTGGGGATCGTACTGATTGGGTTATGCATGAGTATAGGCTTGAAGATAAGGATTTGACTGATAGAGGAATTGTTCAGGATTCCTATGTAATCTGTAAGGTATTTCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAATATGGGAAACCATTTAATGAGGAAGACTGGAGTGATGATGAAGTAGGAATACCATTTGCTGAGCCAGCTGCACTAGCTCCCACTTTGCCTGTGACATCTAATAGTTTTGTTCTAAATGACCAGAATCTCCATGCTATTGGATATAATGGTTCAATATCCATGCCAAGTCAATCAGGATTGATGCCTTCTCCCGATCCAGCAAATTCATGTCAAACAGGATTACAAACAGGATTACCGCCTTCTCCCGACCCTGCAAATTCATGTCAAACAGGAGTTCCTTCTCCCTACCCTGCAAATTCATGTCAAATAGGATTGACGCCTTCTGTAGACCCTGTGAATTCATGTCAAACAGGATTTATGCCGTCTCCCGACCCTTCAAATTCATGTCAAACAGGGTATATGCCGTCTCCCGATCCTGCAAATGAATGTCAAATAGGATTTATGTCTCCCGACCCTGCAAATTCACGTCAAACAGGATTGGAGCTGTCTCCCACTGGCCCTGCAAATTCATGTAAAACAAGATTGGTGCCTTCTCCCGACCCTGTGGATAATTCATATCATCAAGCTGTTAATAATGATGACATTTTATCAATGCTTGATATGTTCGACGACGACATATTGCCTGAGGCTTCGTGTTTTAGCTATCCCCTGCAGTTTGCATTGTCTCCTCATAATGAAAACAATGCTGAAGGTGCACTATCAACTGACTTTTTTGATGGTTTGGGAGACCTGGATTGCTTGGGACCTGTTGGCCAGAATGCTGACTTTAGCACATACGGAATGGCTCCTACGGGGGATGACTACTTGGATTTCATGGAGTTGATTGATCTAGACTCCGAGATGTTCTGGCAGAGTGCTGCGGAACCTAAGTTGGACCCAAAATAA
Protein sequence

>Msa1199400

MAIPKLVPGFRFSPTGVELIKYFLKRKVMGKKFHNDVIAELDIYKYAPWDLPDLSYLQNGDLEWYFFCPIGKKYGSGSRMNRSTETGFWKATGKDRAVQQNNQIVGMIKTLIFHTGKAPRGDRTDWVMHEYRLEDKDLTDRGIVQDSYVICKVFQKEGPGPRNGAQYGKPFNEEDWSDDEVGIPFAEPAALAPTLPVTSNSFVLNDQNLHAIGYNGSISMPSQSGLMPSPDPANSCQTGLQTGLPPSPDPANSCQTGVPSPYPANSCQIGLTPSVDPVNSCQTGFMPSPDPSNSCQTGYMPSPDPANECQIGFMSPDPANSRQTGLELSPTGPANSCKTRLVPSPDPVDNSYHQAVNNDDILSMLDMFDDDILPEASCFSYPLQFALSPHNENNAEGALSTDFFDGLGDLDCLGPVGQNADFSTYGMAPTGDDYLDFMELIDLDSEMFWQSAAEPKLDPK*