AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1210800


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1210800 MtrunA17_Chr4g0059631 77.972 286 25 2 4 289 1 248 2.30e-155 444
Msa1210800 MtrunA17_Chr4g0059631 78.030 264 40 4 289 543 1 255 1.32e-142 411
Msa1210800 MtrunA17_Chr4g0022641 53.793 290 103 5 4 289 1 263 1.38e-89 281
Msa1210800 MtrunA17_Chr4g0022641 51.237 283 97 4 289 543 1 270 5.70e-85 269
Msa1210800 MtrunA17_Chr1g0212471 62.987 154 55 1 4 155 1 154 7.06e-60 196
Msa1210800 MtrunA17_Chr1g0212471 55.346 159 60 2 289 436 1 159 1.93e-49 169
Msa1210800 MtrunA17_Chr2g0303981 50.617 162 77 3 6 165 5 165 1.79e-45 158
Msa1210800 MtrunA17_Chr2g0303981 46.309 149 69 3 291 429 5 152 3.03e-35 130
Msa1210800 MtrunA17_Chr6g0457851 40.385 156 90 1 3 155 10 165 2.24e-35 135
Msa1210800 MtrunA17_Chr6g0457851 34.839 155 89 2 287 429 9 163 6.45e-28 114
Msa1210800 MtrunA17_Chr1g0212151 42.581 155 86 1 4 155 1 155 1.65e-34 133
Msa1210800 MtrunA17_Chr1g0212151 39.333 150 79 2 289 426 1 150 1.33e-27 114
Msa1210800 MtrunA17_Chr6g0449851 38.462 156 93 1 4 156 1 156 1.59e-32 127
Msa1210800 MtrunA17_Chr6g0449851 36.601 153 85 2 289 429 1 153 4.52e-27 111
Msa1210800 MtrunA17_Chr6g0449861 34.184 196 120 3 3 189 8 203 2.39e-28 116
Msa1210800 MtrunA17_Chr6g0449861 33.129 163 93 3 279 429 3 161 2.79e-22 98.6
Msa1210800 MtrunA17_Chr3g0107381 31.618 136 87 4 4 138 1 131 8.20e-14 70.9
Msa1210800 MtrunA17_Chr3g0107381 26.180 233 136 9 289 509 1 209 2.42e-12 66.6
Msa1210800 MtrunA17_Chr2g0283941 29.655 145 91 3 5 141 3 144 1.31e-13 70.9
Msa1210800 MtrunA17_Chr2g0283941 29.655 145 82 5 290 417 3 144 8.20e-12 65.5
Msa1210800 MtrunA17_Chr5g0432691 32.075 106 68 3 4 108 1 103 5.45e-11 61.2
Msa1210800 MtrunA17_Chr3g0107461 31.092 119 74 4 4 117 1 116 7.99e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1210800 AT5G55690.1 33.113 151 90 3 4 150 1 144 2.18e-15 77.0
Msa1210800 AT5G55690.1 32.948 173 99 6 289 447 1 170 3.71e-12 67.4
Msa1210800 AT5G55690.2 33.113 151 90 3 4 150 1 144 2.18e-15 77.0
Msa1210800 AT5G55690.2 32.948 173 99 6 289 447 1 170 3.71e-12 67.4
Msa1210800 AT1G22590.2 35.849 106 64 3 4 108 1 103 7.98e-11 61.2

Find 95 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACACTTGTAAGGTCTTC+TGG 0.270047 8_1:+70022515 None:intergenic
TTTACACTTGTAAGGTCTTC+TGG 0.270047 8_1:+70028606 None:intergenic
TCCTGAGATATTTGATGTTA+AGG 0.348371 8_1:-70022450 Msa1210800:CDS
TCCTGAGATATTTGATGTTA+AGG 0.348371 8_1:-70028541 Msa1210800:CDS
GCACTTTGGATGTATTTCAT+AGG 0.357011 8_1:+70022677 None:intergenic
AGCCCACTAAGTTGGTTTGA+TGG 0.416723 8_1:+70022055 None:intergenic
AGCCCACTAAGTTGGTTTGA+TGG 0.416723 8_1:+70028246 None:intergenic
ACCATCTCACTTGTATAATC+AGG 0.418843 8_1:+70022004 None:intergenic
ACCATCTCACTTGTATAATC+AGG 0.418843 8_1:+70028195 None:intergenic
GATCAACAAGTTGACTAAGT+TGG 0.422061 8_1:+70021825 None:intergenic
ACAATCTCACTCATATAATC+AGG 0.433010 8_1:+70021893 None:intergenic
ACAATCTCACTCATATAATC+AGG 0.433010 8_1:+70028084 None:intergenic
GCAAGGAGTTTACACTTGTA+AGG 0.440354 8_1:+70022507 None:intergenic
GCAAGGAGTTTACACTTGTA+AGG 0.440354 8_1:+70028598 None:intergenic
AGTTGGTTTGCTGATGAACT+TGG 0.448642 8_1:+70021842 None:intergenic
AGTTGGTTTGATGGTGAACT+AGG 0.459766 8_1:+70028255 None:intergenic
CTAAAATGTGGATGCCAAGT+TGG 0.461195 8_1:+70028441 None:intergenic
ACTTTCAAACAGAGAAAGAA+TGG 0.462915 8_1:-70028729 Msa1210800:CDS
TCTTTCCAAACAAACTCATC+AGG 0.470431 8_1:+70027940 None:intergenic
AGTTGGTCTGCTGATGAACT+TGG 0.474993 8_1:+70028033 None:intergenic
GATCAACAAGTTGACTAAGT+TGG 0.479158 8_1:+70028016 None:intergenic
CTAAAATGTGGATGCCAAGT+TGG 0.479466 8_1:+70022350 None:intergenic
TAAAATGTGGATGCCAAGTT+GGG 0.491000 8_1:+70022351 None:intergenic
TAAAATGTGGATGCCAAGTT+GGG 0.491000 8_1:+70028442 None:intergenic
GCTTGCTTTATTGTGTATGA+TGG 0.491871 8_1:-70022569 Msa1210800:CDS
GCTTGCTTTATTGTGTATGA+TGG 0.491871 8_1:-70028660 Msa1210800:CDS
TCATCATCAAACCAACTTAG+TGG 0.501564 8_1:-70021947 Msa1210800:CDS
TCATCATCAAACCAACTTAG+TGG 0.501564 8_1:-70028138 Msa1210800:CDS
TCCTTAACATCAAATATCTC+AGG 0.501707 8_1:+70022449 None:intergenic
TCCTTAACATCAAATATCTC+AGG 0.501707 8_1:+70028540 None:intergenic
TCTCCACAAGCCCACTAAGT+TGG 0.502348 8_1:+70022047 None:intergenic
TCTCCACAAGCCCACTAAGT+TGG 0.502348 8_1:+70028238 None:intergenic
CTTTGAAAATAAGATAGAAA+AGG 0.507369 8_1:-70022423 Msa1210800:CDS
CTTTGAAAATAAGATAGAAA+AGG 0.507369 8_1:-70028514 Msa1210800:CDS
TCTCCACAAGCCCACTAAGT+TGG 0.508925 8_1:+70021936 None:intergenic
TCTCCACAAGCCCACTAAGT+TGG 0.508925 8_1:+70028127 None:intergenic
TTGTAAGAAGTCTGGAGCAA+AGG 0.512867 8_1:-70022591 Msa1210800:CDS
TTGTAAGAAGTCTGGAGCAA+AGG 0.512867 8_1:-70028682 Msa1210800:CDS
AACTTGTTGATCTTGATGAC+TGG 0.515181 8_1:-70021814 Msa1210800:CDS
AACTTGTTGATCTTGATGAC+TGG 0.515181 8_1:-70028005 Msa1210800:CDS
AGGTCTTCTGGCCATGTCGT+TGG 0.516955 8_1:+70028618 None:intergenic
TCACCATCAAACCAACTTAG+TGG 0.519319 8_1:-70022058 Msa1210800:CDS
TCACCATCAAACCAACTTAG+TGG 0.519319 8_1:-70028249 Msa1210800:CDS
ATTGTGGATTTCACTAGTCT+TGG 0.527589 8_1:-70021875 Msa1210800:CDS
ATTGTGGATTTCACTAGTCT+TGG 0.527589 8_1:-70028066 Msa1210800:CDS
AGTTGGTTTGATGATGAACT+AGG 0.530891 8_1:+70021953 None:intergenic
AGTTGGTTTGATGATGAACT+AGG 0.530891 8_1:+70028144 None:intergenic
TATAATCAGGATTAACAACT+TGG 0.538229 8_1:+70021906 None:intergenic
TATAATCAGGATTAACAACT+TGG 0.538229 8_1:+70028097 None:intergenic
AAACCAACTTAGTGGGCTTG+TGG 0.552156 8_1:-70021939 Msa1210800:CDS
AAACCAACTTAGTGGGCTTG+TGG 0.552156 8_1:-70022050 Msa1210800:CDS
AAACCAACTTAGTGGGCTTG+TGG 0.552156 8_1:-70028130 Msa1210800:CDS
AAACCAACTTAGTGGGCTTG+TGG 0.552156 8_1:-70028241 Msa1210800:CDS
CATCATCAAACCAACTTAGT+GGG 0.554520 8_1:-70021946 Msa1210800:CDS
CATCATCAAACCAACTTAGT+GGG 0.554520 8_1:-70028137 Msa1210800:CDS
AGGAGGCAAATCACCAAGAC+TGG 0.555082 8_1:+70021973 None:intergenic
AGGAGGCAAATCACCAAGAC+TGG 0.555082 8_1:+70028164 None:intergenic
ACTTTCAAACAGAGAAAGCA+TGG 0.556747 8_1:-70022638 Msa1210800:CDS
AGGTCTTCTGGCCATGTCGT+AGG 0.557005 8_1:+70022527 None:intergenic
ATGGTGGATTTCACCAGTCT+TGG 0.561657 8_1:-70021986 Msa1210800:CDS
ATGGTGGATTTCACCAGTCT+TGG 0.561657 8_1:-70028177 Msa1210800:CDS
TCATCCAAATTACTAAAATG+TGG 0.563288 8_1:+70028429 None:intergenic
TGATTATATGAGTGAGATTG+TGG 0.565961 8_1:-70021891 Msa1210800:CDS
TGATTATATGAGTGAGATTG+TGG 0.565961 8_1:-70028082 Msa1210800:CDS
TCATCCAAGTTACTAAAATG+TGG 0.567439 8_1:+70022338 None:intergenic
TGGTTTGCTGATGAACTTGG+AGG 0.570787 8_1:+70021845 None:intergenic
TCACTAAGATCTACCCAACT+TGG 0.574367 8_1:-70022364 Msa1210800:CDS
TCACTAAGATCTACCCAACT+TGG 0.574367 8_1:-70028455 Msa1210800:CDS
TATAATCAGGATCAACAACT+TGG 0.576059 8_1:+70022017 None:intergenic
TATAATCAGGATCAACAACT+TGG 0.576059 8_1:+70028208 None:intergenic
CACCATCAAACCAACTTAGT+GGG 0.576425 8_1:-70022057 Msa1210800:CDS
CACCATCAAACCAACTTAGT+GGG 0.576425 8_1:-70028248 Msa1210800:CDS
AGTGGGCTTGTGGAGAGGAA+TGG 0.577682 8_1:-70022040 Msa1210800:CDS
AGTGGGCTTGTGGAGAGGAA+TGG 0.577682 8_1:-70028231 Msa1210800:CDS
ATTCTGATACTCTTGAAGCA+AGG 0.580425 8_1:+70028581 None:intergenic
TGGTCTGCTGATGAACTTGG+AGG 0.582147 8_1:+70028036 None:intergenic
AACTTAGTGGGCTTGTGGAG+AGG 0.584533 8_1:-70022045 Msa1210800:CDS
AACTTAGTGGGCTTGTGGAG+AGG 0.584533 8_1:-70028236 Msa1210800:CDS
TGATTATACAAGTGAGATGG+TGG 0.591946 8_1:-70022002 Msa1210800:CDS
TGATTATACAAGTGAGATGG+TGG 0.591946 8_1:-70028193 Msa1210800:CDS
ACAAATAGAAACTAGCACCT+TGG 0.593239 8_1:-70028322 Msa1210800:CDS
TGGTTTGATGGTGAACTAGG+AGG 0.598871 8_1:+70028258 None:intergenic
AAACAAAGATTAACAAAGTG+CGG 0.604618 8_1:-70022397 Msa1210800:CDS
AAACAAAGATTAACAAAGTG+CGG 0.604618 8_1:-70028488 Msa1210800:CDS
AATCATGTCACATATATCCA+AGG 0.609547 8_1:+70028305 None:intergenic
TGGATAAATCAATTAGATGA+TGG 0.616770 8_1:-70021794 Msa1210800:CDS
TGGATAAATCAATTAGATGA+TGG 0.616770 8_1:-70027985 Msa1210800:CDS
ATAATGTTGAACCAACGACA+TGG 0.647240 8_1:-70028629 Msa1210800:CDS
TGGTTTGATGATGAACTAGG+AGG 0.662339 8_1:+70021956 None:intergenic
TGGTTTGATGATGAACTAGG+AGG 0.662339 8_1:+70028147 None:intergenic
TCCTGATTATACAAGTGAGA+TGG 0.678910 8_1:-70022005 Msa1210800:CDS
TCCTGATTATACAAGTGAGA+TGG 0.678910 8_1:-70028196 Msa1210800:CDS
ATAATCTTGAACCTACGACA+TGG 0.691525 8_1:-70022538 Msa1210800:CDS
AAGTTGGGTAGATCTTAGTG+AGG 0.717752 8_1:+70022366 None:intergenic
AAGTTGGGTAGATCTTAGTG+AGG 0.717752 8_1:+70028457 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAATATACAACTTAAA+AGG + chr8_1:70026698-70026717 None:intergenic 10.0%
!! AAAGAATTATAATATAATAC+TGG + chr8_1:70027782-70027801 None:intergenic 10.0%
!!! ATATTATAATTCTTTTACAT+TGG - chr8_1:70027787-70027806 Msa1210800:intron 10.0%
!!! TTTTCTTTAAATTTGTAGAA+TGG - chr8_1:70021840-70021859 Msa1210800:CDS 15.0%
!! TTTCTTTAAATTTGTAGAAT+GGG - chr8_1:70021841-70021860 Msa1210800:CDS 15.0%
!!! AATTATTTTTATGTAAGATG+AGG + chr8_1:70023156-70023175 None:intergenic 15.0%
!!! ATCTTCCATTTAATTTTTTT+GGG + chr8_1:70023611-70023630 None:intergenic 15.0%
!!! TATCTTCCATTTAATTTTTT+TGG + chr8_1:70023612-70023631 None:intergenic 15.0%
!!! AAATAATTGACTATGATTTT+TGG - chr8_1:70023852-70023871 Msa1210800:intron 15.0%
!!! AATAATTGACTATGATTTTT+GGG - chr8_1:70023853-70023872 Msa1210800:intron 15.0%
!! AAATATTGAAATGAACTATA+CGG + chr8_1:70024650-70024669 None:intergenic 15.0%
!!! CACTAATAGTTTTTTTTTTA+AGG - chr8_1:70024746-70024765 Msa1210800:intron 15.0%
!!! TTTTTTATAGAATAGCTATT+AGG + chr8_1:70024778-70024797 None:intergenic 15.0%
!!! AAATCTTTTATTGAACTATT+AGG + chr8_1:70024804-70024823 None:intergenic 15.0%
!!! AAGATTTAATTTTGGTAAAA+AGG + chr8_1:70024847-70024866 None:intergenic 15.0%
!! AAAAAAAGTTTCAAATAAAG+TGG + chr8_1:70024961-70024980 None:intergenic 15.0%
!!! TATCTTCCATTTAATTTTTT+AGG + chr8_1:70023612-70023631 None:intergenic 15.0%
!! ATTTCATAATTCAAACAAAA+TGG - chr8_1:70026817-70026836 Msa1210800:intron 15.0%
!!! TTGGATTTAAAATATTGTAA+TGG + chr8_1:70026889-70026908 None:intergenic 15.0%
!! ATTCCTTAAAAAAAACTATT+CGG + chr8_1:70026947-70026966 None:intergenic 15.0%
!! TAAATAAATAGAATGACATA+TGG + chr8_1:70027522-70027541 None:intergenic 15.0%
!!! AAGAATATAAGAAATTTTAG+AGG + chr8_1:70027641-70027660 None:intergenic 15.0%
!!! TTTTCTTTAAATTTGTAGAA+TGG - chr8_1:70021840-70021859 Msa1210800:CDS 15.0%
!! TTTCTTTAAATTTGTAGAAT+GGG - chr8_1:70021841-70021860 Msa1210800:CDS 15.0%
!!! CTTTGAAAATAAGATAGAAA+AGG - chr8_1:70022131-70022150 Msa1210800:intron 20.0%
!! ACTTAAATTAAACAACTCTA+TGG + chr8_1:70022907-70022926 None:intergenic 20.0%
!!! AGAAGTGTTTTCAATATTTT+CGG + chr8_1:70023320-70023339 None:intergenic 20.0%
!!! TTCTACATTTTTATTGTTTC+TGG - chr8_1:70023340-70023359 Msa1210800:intron 20.0%
!! TCAATCCCAAAAAAATTAAA+TGG - chr8_1:70023603-70023622 Msa1210800:intron 20.0%
!!! ATACGTGAGATTTTTTAATA+TGG - chr8_1:70023705-70023724 Msa1210800:intron 20.0%
!!! ATACGTGAGATTTTTTAATA+TGG - chr8_1:70023705-70023724 Msa1210800:intron 20.0%
!!! ATTTTTCAGTCATTTTAGTT+AGG - chr8_1:70023804-70023823 Msa1210800:intron 20.0%
!! TAAATAAGAATTCCAATAAG+GGG + chr8_1:70024382-70024401 None:intergenic 20.0%
!! GTAAATAAGAATTCCAATAA+GGG + chr8_1:70024383-70024402 None:intergenic 20.0%
!!! GACATGTTTTTTATTATTGA+CGG + chr8_1:70024939-70024958 None:intergenic 20.0%
!! TATTTATAGATTAGGATTGT+GGG + chr8_1:70025259-70025278 None:intergenic 20.0%
!!! GGATGTATTTTTTTTTTAGA+GGG + chr8_1:70025285-70025304 None:intergenic 20.0%
!!! TAAAACAAACACAAGTTTTA+GGG - chr8_1:70025586-70025605 Msa1210800:intron 20.0%
!!! TATCTTTTTGTGGTTTTATA+AGG + chr8_1:70025729-70025748 None:intergenic 20.0%
!! CTCAATCCTAAAAAATTAAA+TGG - chr8_1:70025784-70025803 Msa1210800:intron 20.0%
!!! GGAAGATATTTACAATTTTT+CGG - chr8_1:70023624-70023643 Msa1210800:intron 20.0%
!!! ATATTTACAATTTTTCGGAT+TGG - chr8_1:70025810-70025829 Msa1210800:intron 20.0%
!!! AAAGTTGTTTTTTTATTACC+CGG + chr8_1:70026458-70026477 None:intergenic 20.0%
!!! TTTATAAGTTGATTTTCAAG+TGG + chr8_1:70026534-70026553 None:intergenic 20.0%
!! TAAAATCAGACTTTGATATT+TGG + chr8_1:70026908-70026927 None:intergenic 20.0%
!!! ATTCCGAATAGTTTTTTTTA+AGG - chr8_1:70026941-70026960 Msa1210800:intron 20.0%
!!! TTTTTTATGGAATAGCTATT+AGG + chr8_1:70026973-70026992 None:intergenic 20.0%
!!! AACAATCAGGATTTTTTTTA+TGG + chr8_1:70026986-70027005 None:intergenic 20.0%
!! TATTTATAGATTAGGAATGT+GGG + chr8_1:70027239-70027258 None:intergenic 20.0%
!!! TTTTCCTTTTTATAATCACT+AGG - chr8_1:70027677-70027696 Msa1210800:intron 20.0%
!! ATTTCCTAGTGATTATAAAA+AGG + chr8_1:70027684-70027703 None:intergenic 20.0%
!! ATAGTAACAGTAGAAATTTA+AGG + chr8_1:70027729-70027748 None:intergenic 20.0%
!!! ACACAAGTATTAGTTTTTAT+AGG - chr8_1:70027829-70027848 Msa1210800:intron 20.0%
!!! CTTTGAAAATAAGATAGAAA+AGG - chr8_1:70022131-70022150 Msa1210800:intron 20.0%
!!! CTCAAGTATTGGTTTTTTAT+AGG - chr8_1:70021739-70021758 Msa1210800:CDS 25.0%
! AAACAAAGATTAACAAAGTG+CGG - chr8_1:70022157-70022176 Msa1210800:intron 25.0%
! TCATCCAAATTACTAAAATG+TGG + chr8_1:70022219-70022238 None:intergenic 25.0%
!!! ATGATTGATTTTTCTGATCT+TGG - chr8_1:70022357-70022376 Msa1210800:CDS 25.0%
! TATAATCAGGATTAACAACT+TGG + chr8_1:70022551-70022570 None:intergenic 25.0%
! TGGATAAATCAATTAGATGA+TGG - chr8_1:70022660-70022679 Msa1210800:CDS 25.0%
!! TTTTTAATCTCAGAAAGAAG+AGG - chr8_1:70022734-70022753 Msa1210800:intron 25.0%
!! TTTTAATCTCAGAAAGAAGA+GGG - chr8_1:70022735-70022754 Msa1210800:intron 25.0%
!! TAAATTATATGTGCTGTTGA+TGG + chr8_1:70022952-70022971 None:intergenic 25.0%
! GGAACATGTTCATAATATAT+TGG + chr8_1:70023037-70023056 None:intergenic 25.0%
!!! TATTTTTATGTAAGATGAGG+CGG + chr8_1:70023153-70023172 None:intergenic 25.0%
!!! AATGTTTTCAAGAAGTAAAC+AGG + chr8_1:70023182-70023201 None:intergenic 25.0%
!! TAAAACCAACACAAGTTTTA+GGG - chr8_1:70023411-70023430 Msa1210800:intron 25.0%
!!! ATCTAGTTCTATGAACTTAA+GGG + chr8_1:70023473-70023492 None:intergenic 25.0%
!!! AATCTAGTTCTATGAACTTA+AGG + chr8_1:70023474-70023493 None:intergenic 25.0%
! TTAAAAAATCTCACGTATTG+TGG + chr8_1:70023703-70023722 None:intergenic 25.0%
!! TATTTGAAACTCCTCTAAAT+TGG + chr8_1:70023837-70023856 None:intergenic 25.0%
! CAATGCAAAATTATGCAAAT+CGG - chr8_1:70023959-70023978 Msa1210800:intron 25.0%
! TTCTTCTTGAAACTTATCTT+GGG + chr8_1:70024081-70024100 None:intergenic 25.0%
! TTTCTTCTTGAAACTTATCT+TGG + chr8_1:70024082-70024101 None:intergenic 25.0%
! AATTAGTGCAAAAAATACAC+TGG - chr8_1:70024173-70024192 Msa1210800:intron 25.0%
!!! TTTATATGCTGATTTATGAG+TGG + chr8_1:70024292-70024311 None:intergenic 25.0%
! ATCATTCATTCAGAATGAAT+AGG - chr8_1:70024332-70024351 Msa1210800:intron 25.0%
! GGTAAATAAGAATTCCAATA+AGG + chr8_1:70024384-70024403 None:intergenic 25.0%
! CTTATTTACCATGTTCTTTA+TGG - chr8_1:70024394-70024413 Msa1210800:intron 25.0%
! AAGAAAATCCATAAAGAACA+TGG + chr8_1:70024405-70024424 None:intergenic 25.0%
! ACCCTTGGAATAAATTAATT+GGG - chr8_1:70024433-70024452 Msa1210800:intron 25.0%
! ACCCAATTAATTTATTCCAA+GGG + chr8_1:70024437-70024456 None:intergenic 25.0%
! AACCCAATTAATTTATTCCA+AGG + chr8_1:70024438-70024457 None:intergenic 25.0%
! GTAGAAATATTATTGTCGAT+CGG - chr8_1:70024900-70024919 Msa1210800:intron 25.0%
! ATTTATAGATTAGGATTGTG+GGG + chr8_1:70025258-70025277 None:intergenic 25.0%
! GTATTTATAGATTAGGATTG+TGG + chr8_1:70025260-70025279 None:intergenic 25.0%
!!! GGGATGTATTTTTTTTTTAG+AGG + chr8_1:70025286-70025305 None:intergenic 25.0%
!! AATGTTTTCACAAAGTAAAC+AGG + chr8_1:70025356-70025375 None:intergenic 25.0%
! AAGAAGATAAAGTGATAGTT+AGG - chr8_1:70025457-70025476 Msa1210800:intron 25.0%
!!! AAAAGAGACTTTTAAAGTGA+AGG + chr8_1:70025551-70025570 None:intergenic 25.0%
!!! GTTTGTTTTACTTGTTAACT+CGG + chr8_1:70025576-70025595 None:intergenic 25.0%
!! GTAAAACAAACACAAGTTTT+AGG - chr8_1:70025585-70025604 Msa1210800:intron 25.0%
!! TAATGTTTTCGCAAAGTAAA+TGG - chr8_1:70025625-70025644 Msa1210800:intron 25.0%
!!! AACTAGTTCTATGAACTTAA+GGG + chr8_1:70025652-70025671 None:intergenic 25.0%
!!! AAACTAGTTCTATGAACTTA+AGG + chr8_1:70025653-70025672 None:intergenic 25.0%
! TAAAACCACAAAAAGATAGA+AGG - chr8_1:70025731-70025750 Msa1210800:intron 25.0%
!!! TAAGTTTTGATCCAATTTAG+AGG - chr8_1:70026051-70026070 Msa1210800:intron 25.0%
! AAGTCTCAAGATAAATTTCA+AGG - chr8_1:70026299-70026318 Msa1210800:intron 25.0%
! ACTTAAAAAGACCAAGAAAA+AGG - chr8_1:70026330-70026349 Msa1210800:intron 25.0%
! AATGAATGATTATGAATGAG+AGG + chr8_1:70026564-70026583 None:intergenic 25.0%
! ATGGTAAATAAACCCAATAA+GGG + chr8_1:70026625-70026644 None:intergenic 25.0%
! ATCCGATTAATTTATTCGAT+GGG + chr8_1:70026669-70026688 None:intergenic 25.0%
! TATCCGATTAATTTATTCGA+TGG + chr8_1:70026670-70026689 None:intergenic 25.0%
! AAATCTTGTATTGAACAATC+AGG + chr8_1:70026999-70027018 None:intergenic 25.0%
! GTATTTATAGATTAGGAATG+TGG + chr8_1:70027240-70027259 None:intergenic 25.0%
! AAGGGATGTATTTATAGATT+AGG + chr8_1:70027247-70027266 None:intergenic 25.0%
! AAACAAAAAGAGTGAAGTAA+GGG + chr8_1:70027281-70027300 None:intergenic 25.0%
!!! AACGTGTTTTTTACCTTAAA+CGG + chr8_1:70027354-70027373 None:intergenic 25.0%
! TAAATAGAATGACATATGGA+GGG + chr8_1:70027518-70027537 None:intergenic 25.0%
! ATAAATAGAATGACATATGG+AGG + chr8_1:70027519-70027538 None:intergenic 25.0%
! ACTAGGAAATTTCAAATAGA+TGG - chr8_1:70027694-70027713 Msa1210800:intron 25.0%
! AAACAAAGATTAACAAAGTG+CGG - chr8_1:70022157-70022176 Msa1210800:intron 25.0%
! NNNNNNGTCACATATATCCA+AGG + chr8_1:70028434-70028453 None:intergenic 25.0%
!!! ATGATTGATTTTTCTGATCT+TGG - chr8_1:70022357-70022376 Msa1210800:CDS 25.0%
! TATAATCAGGATTAACAACT+TGG + chr8_1:70022551-70022570 None:intergenic 25.0%
! TGGATAAATCAATTAGATGA+TGG - chr8_1:70022660-70022679 Msa1210800:CDS 25.0%
TTATAGGATTCAGCAAGAAA+AGG - chr8_1:70021755-70021774 Msa1210800:CDS 30.0%
TATAGGATTCAGCAAGAAAA+GGG - chr8_1:70021756-70021775 Msa1210800:CDS 30.0%
! GCATTTTGGATGTATTTCAT+AGG + chr8_1:70021880-70021899 None:intergenic 30.0%
ACTTTCAAACAGAGAAAGAA+TGG - chr8_1:70021916-70021935 Msa1210800:CDS 30.0%
! TCTGAATTTTGTAAGAAGTC+TGG - chr8_1:70021955-70021974 Msa1210800:CDS 30.0%
TCCTGAGATATTTGATGTTA+AGG - chr8_1:70022104-70022123 Msa1210800:intron 30.0%
TCCTTAACATCAAATATCTC+AGG + chr8_1:70022108-70022127 None:intergenic 30.0%
!! GCATCCACATTTTAGTAATT+TGG - chr8_1:70022212-70022231 Msa1210800:intron 30.0%
AATCATGTCACATATATCCA+AGG + chr8_1:70022343-70022362 None:intergenic 30.0%
TATAATCAGGATCAACAACT+TGG + chr8_1:70022440-70022459 None:intergenic 30.0%
ACAATCTCACTCATATAATC+AGG + chr8_1:70022564-70022583 None:intergenic 30.0%
TGATTATATGAGTGAGATTG+TGG - chr8_1:70022563-70022582 Msa1210800:CDS 30.0%
!! AGTTTTGATGGTTTGAAACT+AGG - chr8_1:70022765-70022784 Msa1210800:intron 30.0%
! CATATTGTAAAACTCTGAAG+AGG - chr8_1:70023127-70023146 Msa1210800:intron 30.0%
ATTCTCGTATCTCTTTGTTA+AGG + chr8_1:70023238-70023257 None:intergenic 30.0%
!!! GTTGGTTTTACATGTTAACT+CGG + chr8_1:70023401-70023420 None:intergenic 30.0%
! GTAAAACCAACACAAGTTTT+AGG - chr8_1:70023410-70023429 Msa1210800:intron 30.0%
AGAACTAGATTTCTATGAAG+AGG - chr8_1:70023483-70023502 Msa1210800:intron 30.0%
!! TATCTTTCTGTGGTGTTATA+AGG + chr8_1:70023550-70023569 None:intergenic 30.0%
TTATAACACCACAGAAAGAT+AGG - chr8_1:70023549-70023568 Msa1210800:intron 30.0%
AAGACACACTCAAGTTATTA+TGG - chr8_1:70023650-70023669 Msa1210800:intron 30.0%
TTATTATGGTTCACACAATC+TGG - chr8_1:70023664-70023683 Msa1210800:intron 30.0%
TATTATGGTTCACACAATCT+GGG - chr8_1:70023665-70023684 Msa1210800:intron 30.0%
TAAGATGAGTTGTCATTAGA+GGG + chr8_1:70023769-70023788 None:intergenic 30.0%
!! TAGGTTTTGATCCAATTTAG+AGG - chr8_1:70023823-70023842 Msa1210800:intron 30.0%
ACATCAAAAAGACCAAAGAA+CGG + chr8_1:70023935-70023954 None:intergenic 30.0%
! AAAGCATCTCATAAGGATTT+GGG - chr8_1:70023988-70024007 Msa1210800:intron 30.0%
!!! AAAGCTGTTTTTTTTCCCAA+AGG + chr8_1:70024216-70024235 None:intergenic 30.0%
!!! CTTTTTGTTGTTTTTCTCTG+CGG - chr8_1:70024232-70024251 Msa1210800:intron 30.0%
!!! TTTTTGTTGTTTTTCTCTGC+GGG - chr8_1:70024233-70024252 Msa1210800:intron 30.0%
TGGATTTGAGCTGAAAAATT+GGG + chr8_1:70024272-70024291 None:intergenic 30.0%
AATGAATGATTGTGAATGAG+AGG + chr8_1:70024322-70024341 None:intergenic 30.0%
ATTAGATTCAAGTCCATCTA+AGG + chr8_1:70024359-70024378 None:intergenic 30.0%
GACCCTTGGAATAAATTAAT+TGG - chr8_1:70024432-70024451 Msa1210800:intron 30.0%
TTGTGCACATTAGAACATTT+CGG - chr8_1:70024510-70024529 Msa1210800:intron 30.0%
ATGAAATCCAAAACGATGTA+GGG + chr8_1:70024564-70024583 None:intergenic 30.0%
TATGAAATCCAAAACGATGT+AGG + chr8_1:70024565-70024584 None:intergenic 30.0%
ATTTCATAATCCAAACCAGA+TGG - chr8_1:70024577-70024596 Msa1210800:intron 30.0%
!! GTTTATTTTTCCATCTGGTT+TGG + chr8_1:70024590-70024609 None:intergenic 30.0%
!! TGAGAGTTTATTTTTCCATC+TGG + chr8_1:70024595-70024614 None:intergenic 30.0%
ATATAATGAAAAACGCACGT+TGG - chr8_1:70024878-70024897 Msa1210800:intron 30.0%
AAATTTCGCCGTGATAATTA+GGG - chr8_1:70025180-70025199 Msa1210800:intron 30.0%
!! TTGATTTTGTTTCCCAAATC+AGG - chr8_1:70025226-70025245 Msa1210800:intron 30.0%
GAGGGATGTATTTATAGATT+AGG + chr8_1:70025267-70025286 None:intergenic 30.0%
TCACTTTATCTTCTTTCCAT+CGG + chr8_1:70025452-70025471 None:intergenic 30.0%
! AGTTAGGAATGATGCATTTT+CGG - chr8_1:70025473-70025492 Msa1210800:intron 30.0%
!!! AGAACTAGTTTTCTATGAAG+AGG - chr8_1:70025662-70025681 Msa1210800:intron 30.0%
AATCAGAACCATAATCAAAG+TGG - chr8_1:70025700-70025719 Msa1210800:intron 30.0%
TAAGGATACCACTTTGATTA+TGG + chr8_1:70025711-70025730 None:intergenic 30.0%
TTCGTATCTCTTACTTTGAT+AGG + chr8_1:70025856-70025875 None:intergenic 30.0%
TCGTAAAATCTCACGTATTA+TGG + chr8_1:70025961-70025980 None:intergenic 30.0%
!! GTTCTAAAACTCCTCTAAAT+TGG + chr8_1:70026065-70026084 None:intergenic 30.0%
!!! TAGAGGAGTTTTAGAACAAT+TGG - chr8_1:70026068-70026087 Msa1210800:intron 30.0%
!!! AGTTTTAGAACAATTGGCTA+TGG - chr8_1:70026074-70026093 Msa1210800:intron 30.0%
CAATGCAAAATCATGCAAAT+CGG - chr8_1:70026184-70026203 Msa1210800:intron 30.0%
ATGAGAATTTGTGAAGACAA+TGG - chr8_1:70026223-70026242 Msa1210800:intron 30.0%
TGAGAATTTGTGAAGACAAT+GGG - chr8_1:70026224-70026243 Msa1210800:intron 30.0%
! TCTCTAAAGACATTACAAAG+TGG - chr8_1:70026262-70026281 Msa1210800:intron 30.0%
! ATGCATTTTTGCCTTTTTCT+TGG + chr8_1:70026344-70026363 None:intergenic 30.0%
AAAAGGCAAAAATGCATAAG+AGG - chr8_1:70026347-70026366 Msa1210800:intron 30.0%
TGGATTTGGATTGAAAAACT+GGG + chr8_1:70026514-70026533 None:intergenic 30.0%
!!! AGTTGATTTTCAAGTGGATT+TGG + chr8_1:70026528-70026547 None:intergenic 30.0%
ATTAGATTCAAGTCCATCTA+AGG + chr8_1:70024359-70024378 None:intergenic 30.0%
TTGAATCTAATCCCCTTATT+GGG - chr8_1:70024368-70024387 Msa1210800:intron 30.0%
TGGTAAATAAACCCAATAAG+GGG + chr8_1:70026624-70026643 None:intergenic 30.0%
CATGGTAAATAAACCCAATA+AGG + chr8_1:70026626-70026645 None:intergenic 30.0%
GATTAATTTATTCGATGGGT+CGG + chr8_1:70026665-70026684 None:intergenic 30.0%
GACCCATCGAATAAATTAAT+CGG - chr8_1:70026664-70026683 Msa1210800:intron 30.0%
ATGAAATCCAAAATGTTGCA+TGG + chr8_1:70026804-70026823 None:intergenic 30.0%
AATTTCGCCGTGTAATAATT+AGG - chr8_1:70027161-70027180 Msa1210800:intron 30.0%
ATTTCGCCGTGTAATAATTA+GGG - chr8_1:70027162-70027181 Msa1210800:intron 30.0%
TTGTTGCCCTAATTATTACA+CGG + chr8_1:70027171-70027190 None:intergenic 30.0%
! GTAAGGGTTTAGTTTAACAA+GGG + chr8_1:70027265-70027284 None:intergenic 30.0%
! AGTAAGGGTTTAGTTTAACA+AGG + chr8_1:70027266-70027285 None:intergenic 30.0%
CAAACAAAAAGAGTGAAGTA+AGG + chr8_1:70027282-70027301 None:intergenic 30.0%
! TCTGAATTTTGTAAGAAGTC+TGG - chr8_1:70021955-70021974 Msa1210800:CDS 30.0%
TCCTGAGATATTTGATGTTA+AGG - chr8_1:70022104-70022123 Msa1210800:intron 30.0%
TCCTTAACATCAAATATCTC+AGG + chr8_1:70022108-70022127 None:intergenic 30.0%
TCATCCAAGTTACTAAAATG+TGG + chr8_1:70028310-70028329 None:intergenic 30.0%
TATAATCAGGATCAACAACT+TGG + chr8_1:70022440-70022459 None:intergenic 30.0%
ACAATCTCACTCATATAATC+AGG + chr8_1:70022564-70022583 None:intergenic 30.0%
TGATTATATGAGTGAGATTG+TGG - chr8_1:70022563-70022582 Msa1210800:CDS 30.0%
TCTTTCCAAAAAAACTCATC+AGG + chr8_1:70028899-70028918 None:intergenic 30.0%
ATAGGATTCAGCAAGAAAAG+GGG - chr8_1:70021757-70021776 Msa1210800:CDS 35.0%
! GTTTGCGAGATTTTGCATTT+TGG + chr8_1:70021894-70021913 None:intergenic 35.0%
! GCTTGCTTTATTGTGTATGA+TGG - chr8_1:70021985-70022004 Msa1210800:CDS 35.0%
ATAATGTTGAACCAACGACA+TGG - chr8_1:70022016-70022035 Msa1210800:CDS 35.0%
TTTACACTTGTAAGGTCTTC+TGG + chr8_1:70022042-70022061 None:intergenic 35.0%
ATTCTGATACTCTTGAAGCA+AGG + chr8_1:70022067-70022086 None:intergenic 35.0%
TAAAATGTGGATGCCAAGTT+GGG + chr8_1:70022206-70022225 None:intergenic 35.0%
ACAAATAGAAACTAGCACCT+TGG - chr8_1:70022323-70022342 Msa1210800:CDS 35.0%
TCCTGATTATACAAGTGAGA+TGG - chr8_1:70022449-70022468 Msa1210800:CDS 35.0%
ACCATCTCACTTGTATAATC+AGG + chr8_1:70022453-70022472 None:intergenic 35.0%
TGATTATACAAGTGAGATGG+TGG - chr8_1:70022452-70022471 Msa1210800:CDS 35.0%
!! AGTTGGTTTGATGATGAACT+AGG + chr8_1:70022504-70022523 None:intergenic 35.0%
TCATCATCAAACCAACTTAG+TGG - chr8_1:70022507-70022526 Msa1210800:intron 35.0%
CATCATCAAACCAACTTAGT+GGG - chr8_1:70022508-70022527 Msa1210800:intron 35.0%
! ATTGTGGATTTCACTAGTCT+TGG - chr8_1:70022579-70022598 Msa1210800:CDS 35.0%
! GATCAACAAGTTGACTAAGT+TGG + chr8_1:70022632-70022651 None:intergenic 35.0%
!! AACTTGTTGATCTTGATGAC+TGG - chr8_1:70022640-70022659 Msa1210800:CDS 35.0%
TCTTTCCAAACAAACTCATC+AGG + chr8_1:70022708-70022727 None:intergenic 35.0%
CTATGTTTGTGTTGTGAACT+TGG - chr8_1:70022857-70022876 Msa1210800:intron 35.0%
TTGTTAGCAATTGCTCTCTA+AGG - chr8_1:70022989-70023008 Msa1210800:intron 35.0%
CTTGAAGTGAGTCATTCTAA+TGG - chr8_1:70023258-70023277 Msa1210800:intron 35.0%
TCAATCCCTAAAACTTGTGT+TGG + chr8_1:70023419-70023438 None:intergenic 35.0%
AACCAGAACCATAATCAATG+TGG - chr8_1:70023521-70023540 Msa1210800:intron 35.0%
! TAAGGATGCCACATTGATTA+TGG + chr8_1:70023532-70023551 None:intergenic 35.0%
GTAAGATGAGTTGTCATTAG+AGG + chr8_1:70023770-70023789 None:intergenic 35.0%
AAAAAGACCAAAGAACGGTT+TGG + chr8_1:70023930-70023949 None:intergenic 35.0%
! CAAAGCATCTCATAAGGATT+TGG - chr8_1:70023987-70024006 Msa1210800:intron 35.0%
CCACTTTGTAATATCTTCAG+AGG + chr8_1:70024040-70024059 None:intergenic 35.0%
! CCTCTGAAGATATTACAAAG+TGG - chr8_1:70024037-70024056 Msa1210800:intron 35.0%
TTGAAACTTATCTTGGGACT+TGG + chr8_1:70024075-70024094 None:intergenic 35.0%
AGAAAAAGACGAAAACGCAT+TGG - chr8_1:70024120-70024139 Msa1210800:intron 35.0%
GTGGATTTGAGCTGAAAAAT+TGG + chr8_1:70024273-70024292 None:intergenic 35.0%
AGAATGAATAGGTCCTTAGA+TGG - chr8_1:70024343-70024362 Msa1210800:intron 35.0%
CTTGAATCTAATCCCCTTAT+TGG - chr8_1:70024367-70024386 Msa1210800:intron 35.0%
! AAAAACACCCTACATCGTTT+TGG - chr8_1:70024554-70024573 Msa1210800:intron 35.0%
GAAATTTCGCCGTGATAATT+AGG - chr8_1:70025179-70025198 Msa1210800:intron 35.0%
TCTTGTTGCCCTAATTATCA+CGG + chr8_1:70025191-70025210 None:intergenic 35.0%
AAGACACAATCAAGTTATCG+TGG - chr8_1:70025885-70025904 Msa1210800:intron 35.0%
TAAGATGACCTGTCATTAGA+GGG + chr8_1:70026001-70026020 None:intergenic 35.0%
TTAAGATGACCTGTCATTAG+AGG + chr8_1:70026002-70026021 None:intergenic 35.0%
!! ACCAAAGAACGACTTGTTTT+CGG + chr8_1:70026149-70026168 None:intergenic 35.0%
!! ACAATGGGTTATGATTCAAG+AGG - chr8_1:70026239-70026258 Msa1210800:intron 35.0%
! TGTTTTTCTCTGCAGATTTG+AGG - chr8_1:70026482-70026501 Msa1210800:intron 35.0%
! GTTTTTCTCTGCAGATTTGA+GGG - chr8_1:70026483-70026502 Msa1210800:intron 35.0%
GTGGATTTGGATTGAAAAAC+TGG + chr8_1:70026515-70026534 None:intergenic 35.0%
AGAATGAAGTAGTCCTTAGA+TGG - chr8_1:70026585-70026604 Msa1210800:intron 35.0%
CTTGAATCTAATCCCCTTAT+TGG - chr8_1:70024367-70024386 Msa1210800:intron 35.0%
AATGTTGTAGTGCACATGAA+GGG + chr8_1:70026744-70026763 None:intergenic 35.0%
AAATGTTGTAGTGCACATGA+AGG + chr8_1:70026745-70026764 None:intergenic 35.0%
ATCCAAAATGTTGCATGGTA+GGG + chr8_1:70026799-70026818 None:intergenic 35.0%
AATCCAAAATGTTGCATGGT+AGG + chr8_1:70026800-70026819 None:intergenic 35.0%
!!! GTGTTTTTTACCTTAAACGG+TGG + chr8_1:70027351-70027370 None:intergenic 35.0%
TGGTTCTTTGCTTTCTTTCT+GGG + chr8_1:70027569-70027588 None:intergenic 35.0%
ATGGTTCTTTGCTTTCTTTC+TGG + chr8_1:70027570-70027589 None:intergenic 35.0%
! AAACGTTGAGATGAGTTGAA+TGG + chr8_1:70027589-70027608 None:intergenic 35.0%
TTATAGGACTCAGCAAGAAA+AGG - chr8_1:70027845-70027864 Msa1210800:intron 35.0%
TATAGGACTCAGCAAGAAAA+GGG - chr8_1:70027846-70027865 Msa1210800:intron 35.0%
GCACTTTGGATGTATTTCAT+AGG + chr8_1:70027971-70027990 None:intergenic 35.0%
ACTTTCAAACAGAGAAAGCA+TGG - chr8_1:70028007-70028026 Msa1210800:CDS 35.0%
! GCTTGCTTTATTGTGTATGA+TGG - chr8_1:70021985-70022004 Msa1210800:CDS 35.0%
ATAATCTTGAACCTACGACA+TGG - chr8_1:70028107-70028126 Msa1210800:CDS 35.0%
TTTACACTTGTAAGGTCTTC+TGG + chr8_1:70022042-70022061 None:intergenic 35.0%
ATTCTGATACTCTTGAAGCA+AGG + chr8_1:70022067-70022086 None:intergenic 35.0%
TAAAATGTGGATGCCAAGTT+GGG + chr8_1:70022206-70022225 None:intergenic 35.0%
!! GCATCCACATTTTAGTAACT+TGG - chr8_1:70028303-70028322 Msa1210800:CDS 35.0%
ACAAATAGAAACTAGCACCT+TGG - chr8_1:70022323-70022342 Msa1210800:CDS 35.0%
TCCTGATTATACAAGTGAGA+TGG - chr8_1:70022449-70022468 Msa1210800:CDS 35.0%
ACCATCTCACTTGTATAATC+AGG + chr8_1:70022453-70022472 None:intergenic 35.0%
TGATTATACAAGTGAGATGG+TGG - chr8_1:70022452-70022471 Msa1210800:CDS 35.0%
!! AGTTGGTTTGATGATGAACT+AGG + chr8_1:70022504-70022523 None:intergenic 35.0%
TCATCATCAAACCAACTTAG+TGG - chr8_1:70022507-70022526 Msa1210800:intron 35.0%
CATCATCAAACCAACTTAGT+GGG - chr8_1:70022508-70022527 Msa1210800:intron 35.0%
! ATTGTGGATTTCACTAGTCT+TGG - chr8_1:70022579-70022598 Msa1210800:CDS 35.0%
! GATCAACAAGTTGACTAAGT+TGG + chr8_1:70022632-70022651 None:intergenic 35.0%
!! AACTTGTTGATCTTGATGAC+TGG - chr8_1:70022640-70022659 Msa1210800:CDS 35.0%
!!! GTCAACCTGATGAGTTTTTT+TGG - chr8_1:70028891-70028910 Msa1210800:intron 35.0%
! TTGTAAGAAGTCTGGAGCAA+AGG - chr8_1:70021963-70021982 Msa1210800:CDS 40.0%
GCAAGGAGTTTACACTTGTA+AGG + chr8_1:70022050-70022069 None:intergenic 40.0%
AAGTTGGGTAGATCTTAGTG+AGG + chr8_1:70022191-70022210 None:intergenic 40.0%
TCACTAAGATCTACCCAACT+TGG - chr8_1:70022190-70022209 Msa1210800:intron 40.0%
CTAAAATGTGGATGCCAAGT+TGG + chr8_1:70022207-70022226 None:intergenic 40.0%
!! AGTTGGTTTGATGGTGAACT+AGG + chr8_1:70022393-70022412 None:intergenic 40.0%
TCACCATCAAACCAACTTAG+TGG - chr8_1:70022396-70022415 Msa1210800:CDS 40.0%
CACCATCAAACCAACTTAGT+GGG - chr8_1:70022397-70022416 Msa1210800:CDS 40.0%
!! TGGTTTGATGATGAACTAGG+AGG + chr8_1:70022501-70022520 None:intergenic 40.0%
!! TAGATGATGGTGTTTTGTGC+TGG - chr8_1:70022673-70022692 Msa1210800:CDS 40.0%
!! AGATGATGGTGTTTTGTGCT+GGG - chr8_1:70022674-70022693 Msa1210800:CDS 40.0%
! GTCAACCTGATGAGTTTGTT+TGG - chr8_1:70022700-70022719 Msa1210800:intron 40.0%
TAATCTCAGAAAGAAGAGGG+TGG - chr8_1:70022738-70022757 Msa1210800:intron 40.0%
!! CACTTTACCCTCTAGAGTAT+AGG - chr8_1:70023075-70023094 Msa1210800:intron 40.0%
AGTGAGACCTATACTCTAGA+GGG + chr8_1:70023085-70023104 None:intergenic 40.0%
AAGTGAGACCTATACTCTAG+AGG + chr8_1:70023086-70023105 None:intergenic 40.0%
! AAAAGAGACCTTTGAAGGGA+AGG + chr8_1:70023376-70023395 None:intergenic 40.0%
GGAGAAAAGAGACCTTTGAA+GGG + chr8_1:70023380-70023399 None:intergenic 40.0%
! TGCCACATTGATTATGGTTC+TGG + chr8_1:70023526-70023545 None:intergenic 40.0%
ATTCGACTCCTATCTTTCTG+TGG + chr8_1:70023560-70023579 None:intergenic 40.0%
!!! CCAAAGAACGGTTTGGTTTT+GGG + chr8_1:70023923-70023942 None:intergenic 40.0%
!!! ACCAAAGAACGGTTTGGTTT+TGG + chr8_1:70023924-70023943 None:intergenic 40.0%
! GCAAAGCAAAGCATCTCATA+AGG - chr8_1:70023981-70024000 Msa1210800:intron 40.0%
AAAAGACGAAAACGCATTGG+AGG - chr8_1:70024123-70024142 Msa1210800:intron 40.0%
TTTGCACTAATTCACACACC+CGG + chr8_1:70024165-70024184 None:intergenic 40.0%
! TTTTCTTGTTAGACGACCCT+TGG - chr8_1:70024418-70024437 Msa1210800:intron 40.0%
GCACAAGAAGCTTAAAGACT+GGG + chr8_1:70024496-70024515 None:intergenic 40.0%
TGCACAAGAAGCTTAAAGAC+TGG + chr8_1:70024497-70024516 None:intergenic 40.0%
CACATATAAGAAACGCACGT+TGG - chr8_1:70025154-70025173 Msa1210800:intron 40.0%
TATGTCCAAAGTGAGCTAGA+GGG + chr8_1:70025306-70025325 None:intergenic 40.0%
! TTTGAAGTGAGTCATTCCGA+TGG - chr8_1:70025433-70025452 Msa1210800:intron 40.0%
! CGACTCCTTCTATCTTTTTG+TGG + chr8_1:70025739-70025758 None:intergenic 40.0%
TTGAGATACCCTCTAATGAC+AGG - chr8_1:70023758-70023777 Msa1210800:intron 40.0%
!! CCAAAGAACGACTTGTTTTC+GGG + chr8_1:70026148-70026167 None:intergenic 40.0%
!!! GCTAGTGCATTTTTTTGCAC+TGG + chr8_1:70026422-70026441 None:intergenic 40.0%
GGCTAACAAGAAGAGAAACA+TGG + chr8_1:70026644-70026663 None:intergenic 40.0%
AAGATCATCTCCACCGTTTA+AGG - chr8_1:70027338-70027357 Msa1210800:intron 40.0%
ATAGGACTCAGCAAGAAAAG+GGG - chr8_1:70027847-70027866 Msa1210800:intron 40.0%
! TTTTGCGAGATTTCGCACTT+TGG + chr8_1:70027985-70028004 None:intergenic 40.0%
! TTGTAAGAAGTCTGGAGCAA+AGG - chr8_1:70021963-70021982 Msa1210800:CDS 40.0%
GCAAGGAGTTTACACTTGTA+AGG + chr8_1:70022050-70022069 None:intergenic 40.0%
AAGTTGGGTAGATCTTAGTG+AGG + chr8_1:70022191-70022210 None:intergenic 40.0%
TCACTAAGATCTACCCAACT+TGG - chr8_1:70022190-70022209 Msa1210800:intron 40.0%
CTAAAATGTGGATGCCAAGT+TGG + chr8_1:70022207-70022226 None:intergenic 40.0%
!! AGTTGGTTTGATGGTGAACT+AGG + chr8_1:70022393-70022412 None:intergenic 40.0%
TCACCATCAAACCAACTTAG+TGG - chr8_1:70022396-70022415 Msa1210800:CDS 40.0%
CACCATCAAACCAACTTAGT+GGG - chr8_1:70022397-70022416 Msa1210800:CDS 40.0%
!! TGGTTTGATGATGAACTAGG+AGG + chr8_1:70022501-70022520 None:intergenic 40.0%
!! AGTTGGTTTGCTGATGAACT+TGG + chr8_1:70028806-70028825 None:intergenic 40.0%
!! TAGATGATGGTGTTTTGTGC+TGG - chr8_1:70022673-70022692 Msa1210800:CDS 40.0%
!! AGATGATGGTGTTTTGTGCT+GGG - chr8_1:70022674-70022693 Msa1210800:CDS 40.0%
!! TGGTTTGATGGTGAACTAGG+AGG + chr8_1:70022390-70022409 None:intergenic 45.0%
!! AGCCCACTAAGTTGGTTTGA+TGG + chr8_1:70022402-70022421 None:intergenic 45.0%
!! AAACCAACTTAGTGGGCTTG+TGG - chr8_1:70022404-70022423 Msa1210800:CDS 45.0%
!! ATGGTGGATTTCACCAGTCT+TGG - chr8_1:70022468-70022487 Msa1210800:CDS 45.0%
!! AAACCAACTTAGTGGGCTTG+TGG - chr8_1:70022404-70022423 Msa1210800:CDS 45.0%
! AGTTGGTCTGCTGATGAACT+TGG + chr8_1:70022615-70022634 None:intergenic 45.0%
!! GTGCTGAGTTGATGGAGTAA+TGG + chr8_1:70023058-70023077 None:intergenic 45.0%
!! AGGGTAAAGTGCTGAGTTGA+TGG + chr8_1:70023066-70023085 None:intergenic 45.0%
ATGCAAGACCTTCCCTTCAA+AGG - chr8_1:70023365-70023384 Msa1210800:intron 45.0%
CGGAGAAAAGAGACCTTTGA+AGG + chr8_1:70023381-70023400 None:intergenic 45.0%
CCCAAAACCAAACCGTTCTT+TGG - chr8_1:70023920-70023939 Msa1210800:intron 45.0%
TTGCACTAATTCACACACCC+GGG + chr8_1:70024164-70024183 None:intergenic 45.0%
AAAAAATACACTGGCGCGTG+AGG - chr8_1:70024182-70024201 Msa1210800:intron 45.0%
! TGTTTTTCTCTGCGGGTTTG+AGG - chr8_1:70024240-70024259 Msa1210800:intron 45.0%
! GTTTTTCTCTGCGGGTTTGA+GGG - chr8_1:70024241-70024260 Msa1210800:intron 45.0%
GTGGGGTTATAGCCTGATTT+GGG + chr8_1:70025241-70025260 None:intergenic 45.0%
TGTGGGGTTATAGCCTGATT+TGG + chr8_1:70025242-70025261 None:intergenic 45.0%
! TACATCCCTCTAGCTCACTT+TGG - chr8_1:70025298-70025317 Msa1210800:intron 45.0%
GTATGTCCAAAGTGAGCTAG+AGG + chr8_1:70025307-70025326 None:intergenic 45.0%
AGTCTCGTTTCTCGCTGTTA+AGG + chr8_1:70025413-70025432 None:intergenic 45.0%
CCCGAAAACAAGTCGTTCTT+TGG - chr8_1:70026145-70026164 Msa1210800:intron 45.0%
AATGCATAAGAGGACAGCAG+CGG - chr8_1:70026357-70026376 Msa1210800:intron 45.0%
AGGCGAACAACATCACACTA+AGG + chr8_1:70026387-70026406 None:intergenic 45.0%
TAGTGTGATGTTGTTCGCCT+TGG - chr8_1:70026387-70026406 Msa1210800:intron 45.0%
AGTGTGATGTTGTTCGCCTT+GGG - chr8_1:70026388-70026407 Msa1210800:intron 45.0%
! CACCCTACCATGCAACATTT+TGG - chr8_1:70026794-70026813 Msa1210800:intron 45.0%
GTGGGCTTACAGCTTGATTT+GGG + chr8_1:70027221-70027240 None:intergenic 45.0%
TGTGGGCTTACAGCTTGATT+TGG + chr8_1:70027222-70027241 None:intergenic 45.0%
! CTTTCTGGGTGCAAGTTGAA+TGG + chr8_1:70027555-70027574 None:intergenic 45.0%
!! TGGTTTGATGGTGAACTAGG+AGG + chr8_1:70022390-70022409 None:intergenic 45.0%
!! AGCCCACTAAGTTGGTTTGA+TGG + chr8_1:70022402-70022421 None:intergenic 45.0%
!! AAACCAACTTAGTGGGCTTG+TGG - chr8_1:70022404-70022423 Msa1210800:CDS 45.0%
!! ATGGTGGATTTCACCAGTCT+TGG - chr8_1:70022468-70022487 Msa1210800:CDS 45.0%
!! AAACCAACTTAGTGGGCTTG+TGG - chr8_1:70022404-70022423 Msa1210800:CDS 45.0%
!! TGGTTTGCTGATGAACTTGG+AGG + chr8_1:70028803-70028822 None:intergenic 45.0%
!!! TTAAATAAAAGATTTAATTT+TGG + chr8_1:70024855-70024874 None:intergenic 5.0%
!!! AGTTTTTTTTTTTTATTTTA+TGG + chr8_1:70025024-70025043 None:intergenic 5.0%
!! ACAAAAAAAATAAATAAATT+AGG - chr8_1:70025059-70025078 Msa1210800:intron 5.0%
!! CAAAAAAAATAAATAAATTA+GGG - chr8_1:70025060-70025079 Msa1210800:intron 5.0%
TCTCCACAAGCCCACTAAGT+TGG + chr8_1:70022410-70022429 None:intergenic 50.0%
!! AACTTAGTGGGCTTGTGGAG+AGG - chr8_1:70022409-70022428 Msa1210800:CDS 50.0%
AGGAGGCAAATCACCAAGAC+TGG + chr8_1:70022484-70022503 None:intergenic 50.0%
TCTCCACAAGCCCACTAAGT+TGG + chr8_1:70022410-70022429 None:intergenic 50.0%
TGGTCTGCTGATGAACTTGG+AGG + chr8_1:70022612-70022631 None:intergenic 50.0%
!! GAGGGTGGTGCAAGTTTTGA+TGG - chr8_1:70022753-70022772 Msa1210800:intron 50.0%
TGCACTAATTCACACACCCG+GGG + chr8_1:70024163-70024182 None:intergenic 50.0%
GTGTGATGTTGTTCGCCTTG+GGG - chr8_1:70026389-70026408 Msa1210800:intron 50.0%
TGTGATGTTGTTCGCCTTGG+GGG - chr8_1:70026390-70026409 Msa1210800:intron 50.0%
AAAAAATGCACTAGCGCGCG+AGG - chr8_1:70026427-70026446 Msa1210800:intron 50.0%
TTGTAGTGCACATGAAGGGC+CGG + chr8_1:70026740-70026759 None:intergenic 50.0%
TCTCCACAAGCCCACTAAGT+TGG + chr8_1:70022410-70022429 None:intergenic 50.0%
!! AACTTAGTGGGCTTGTGGAG+AGG - chr8_1:70022409-70022428 Msa1210800:CDS 50.0%
AGGAGGCAAATCACCAAGAC+TGG + chr8_1:70022484-70022503 None:intergenic 50.0%
TCTCCACAAGCCCACTAAGT+TGG + chr8_1:70022410-70022429 None:intergenic 50.0%
AGGTCTTCTGGCCATGTCGT+TGG + chr8_1:70022030-70022049 None:intergenic 55.0%
! AGTGGGCTTGTGGAGAGGAA+TGG - chr8_1:70022414-70022433 Msa1210800:CDS 55.0%
AACGCATTGGAGGACAGCTC+TGG - chr8_1:70024133-70024152 Msa1210800:intron 55.0%
CGTGAGGTGTGTTCGCCTTT+GGG - chr8_1:70024198-70024217 Msa1210800:intron 55.0%
AGGTCTTCTGGCCATGTCGT+AGG + chr8_1:70022030-70022049 None:intergenic 55.0%
! AGTGGGCTTGTGGAGAGGAA+TGG - chr8_1:70022414-70022433 Msa1210800:CDS 55.0%
GCGTGAGGTGTGTTCGCCTT+TGG - chr8_1:70024197-70024216 Msa1210800:intron 60.0%
!! TGCACTGGTTCGCACCCCCA+AGG + chr8_1:70026407-70026426 None:intergenic 65.0%
! AGGACAGCTCTGGCACGCCC+CGG - chr8_1:70024143-70024162 Msa1210800:intron 70.0%
! ACTAGCGCGCGAGGCGCTTC+CGG - chr8_1:70026436-70026455 Msa1210800:intron 70.0%
! GGACAGCTCTGGCACGCCCC+GGG - chr8_1:70024144-70024163 Msa1210800:intron 75.0%
! CTAGCGCGCGAGGCGCTTCC+GGG - chr8_1:70026437-70026456 Msa1210800:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 70021736 70028931 70021736 ID=Msa1210800;Name=Msa1210800
chr8_1 mRNA 70021736 70028931 70021736 ID=Msa1210800-mRNA-1;Parent=Msa1210800;Name=Msa1210800-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|0.8|0.5|0.6|5|0|543
chr8_1 exon 70028924 70028931 70028924 ID=Msa1210800-mRNA-1:exon:23426;Parent=Msa1210800-mRNA-1
chr8_1 exon 70027955 70028809 70027955 ID=Msa1210800-mRNA-1:exon:23425;Parent=Msa1210800-mRNA-1
chr8_1 exon 70022520 70022718 70022520 ID=Msa1210800-mRNA-1:exon:23424;Parent=Msa1210800-mRNA-1
chr8_1 exon 70022269 70022492 70022269 ID=Msa1210800-mRNA-1:exon:23423;Parent=Msa1210800-mRNA-1
chr8_1 exon 70021736 70022081 70021736 ID=Msa1210800-mRNA-1:exon:23422;Parent=Msa1210800-mRNA-1
chr8_1 CDS 70028924 70028931 70028924 ID=Msa1210800-mRNA-1:cds;Parent=Msa1210800-mRNA-1
chr8_1 CDS 70027955 70028809 70027955 ID=Msa1210800-mRNA-1:cds;Parent=Msa1210800-mRNA-1
chr8_1 CDS 70022520 70022718 70022520 ID=Msa1210800-mRNA-1:cds;Parent=Msa1210800-mRNA-1
chr8_1 CDS 70022269 70022492 70022269 ID=Msa1210800-mRNA-1:cds;Parent=Msa1210800-mRNA-1
chr8_1 CDS 70021736 70022081 70021736 ID=Msa1210800-mRNA-1:cds;Parent=Msa1210800-mRNA-1
Gene Sequence

>Msa1210800

ACTCTCAAAATGGGTCGCGCAAAAATACCTATGAAATACATCCAAAATGCAAAATCTCGCAAACTAACTTTCAAACAGAGAAAGAATGGATTAGAAAAGAAAATTTCTGAATTTTGTAAGAAGTCTGGAGCAAAGGCTTGCTTTATTGTGTATGATGGTGATCATAATAATGTTGAACCAACGACATGGCCAGAAGACCTTACAAGTGTAAACTCCTTGCTTCAAGAGTATCAGAATCAAAAGATTGAGAAAACTCCTGAGATATTTGATGTTAAGGACTACTTTGAAAATAAGATAGAAAAGGTTGAAACAAAGATTAACAAAGTGCGGAGAGATATCCTCACTAAGATCTACCCAACTTGGCATCCACATTTTAGTAATTTGGATGAGAATCAACTCAGAGACTTCATTGCTACAATAAATGCTAAGATTCAAGCTTGCAATCACAAAATTAGCATGTTGAAAAATATGCAACAAATAGAAACTAGCACCTTGGATATATGTGACATGATTGATTTTTCTGATCTTGGTGATTTTCCTCCTAGTTCACCATCAAACCAACTTAGTGGGCTTGTGGAGAGGAATGGCCAAGTTGTTGATCCTGATTATACAAGTGAGATGGTGGATTTCACCAGTCTTGGTGATTTGCCTCCTAGTTCATCATCAAACCAACTTAGTGGGCTTGTGGAGATGAGTGACCAAGTTGTTAATCCTGATTATATGAGTGAGATTGTGGATTTCACTAGTCTTGGTGATTTGCCTCCAAGTTCATCAGCAGACCAACTTAGTCAACTTGTTGATCTTGATGACTGGATAAATCAATTAGATGATGGTGTTTTGTGCTGGGATTGTCAACCTGATGAAATGGGTCGCGCAAAAATACCTATGAAATACATCCAAAGTGCGAAATCTCGCAAAATAACTTTCAAACAGAGAAAGCATGGATTAGAAAAGAAAATTTCTGAATTTTGTAAGAAGTCTGGAGCAAAGGCTTGCTTTATTGTGTATGATGGTGATCATAATAATCTTGAACCTACGACATGGCCAGAAGACCTTACAAGTAATCAAAAGATTGAGAAAACTCCTGAGATATTTGATGTTAAGGACTACTTTGAAAATAAGATAGAAAAGGTTGAAACAAAGATTAACAAAGTGCGGAGAGATATCCTCACTAAGATCTACCCAACTTGGCATCCACATTTTAGTAACTTGGATGAGAATCAACTCAGAGACTTCATTGCTACAATAAATGCTAAGATTCAAGCTTGCAATCACAAAATTAGCATTTCACCATCAAACCAACTTAGTGGGCTTGTGGAGAGGAATGGCCAAGTTGTTGATCCTGATTATACAAGTGAGATGGTGGATTTCACCAGTCTTGGTGATTTGCCTCCTAGTTCATCATCAAACCAACTTAGTGGGCTTGTGGAGATGAGTGACCAAGTTGTTAATCCTGATTATATGAGTGAGATTGTGGATTTCACTAGTCTTGGTGATTTGCCTCCAAGTTCATCAGCAAACCAACTTAGTCAACTTGTTGATCTTGATGACTGGATAAATCAATTAGATGATGGTGTTTTGTGCTGGGATTGTCAACCTGATGAGTTTTTTTGGAAAGATCTTTCTTTTTAA

Protein sequence

>Msa1210800

TLKMGRAKIPMKYIQNAKSRKLTFKQRKNGLEKKISEFCKKSGAKACFIVYDGDHNNVEPTTWPEDLTSVNSLLQEYQNQKIEKTPEIFDVKDYFENKIEKVETKINKVRRDILTKIYPTWHPHFSNLDENQLRDFIATINAKIQACNHKISMLKNMQQIETSTLDICDMIDFSDLGDFPPSSPSNQLSGLVERNGQVVDPDYTSEMVDFTSLGDLPPSSSSNQLSGLVEMSDQVVNPDYMSEIVDFTSLGDLPPSSSADQLSQLVDLDDWINQLDDGVLCWDCQPDEMGRAKIPMKYIQSAKSRKITFKQRKHGLEKKISEFCKKSGAKACFIVYDGDHNNLEPTTWPEDLTSNQKIEKTPEIFDVKDYFENKIEKVETKINKVRRDILTKIYPTWHPHFSNLDENQLRDFIATINAKIQACNHKISISPSNQLSGLVERNGQVVDPDYTSEMVDFTSLGDLPPSSSSNQLSGLVEMSDQVVNPDYMSEIVDFTSLGDLPPSSSANQLSQLVDLDDWINQLDDGVLCWDCQPDEFFWKDLSF*