AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1211970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1211970 MtrunA17_Chr4g0060841 90.449 356 8 1 1 330 1 356 0.0 654
Msa1211970 MtrunA17_Chr3g0134451 35.211 213 106 8 1 191 1 203 2.78e-26 106
Msa1211970 MtrunA17_Chr5g0417661 70.149 67 20 0 1 67 56 122 2.95e-25 98.6
Msa1211970 MtrunA17_Chr5g0417671 81.132 53 10 0 59 111 26 78 3.94e-23 91.7
Msa1211970 MtrunA17_Chr5g0425191 62.295 61 23 0 1 61 1 61 2.33e-21 87.4
Msa1211970 MtrunA17_Chr4g0044071 63.934 61 22 0 1 61 1 61 1.30e-20 85.9
Msa1211970 MtrunA17_Chr5g0427401 39.456 147 79 4 1 143 1 141 2.57e-18 82.4
Msa1211970 MtrunA17_Chr1g0159661 39.423 104 63 0 1 104 1 104 4.35e-17 78.2
Msa1211970 MtrunA17_Chr3g0125241 62.264 53 20 0 1 53 26 78 4.23e-16 75.9
Msa1211970 MtrunA17_Chr1g0173161 58.491 53 22 0 1 53 1 53 9.15e-16 71.6
Msa1211970 MtrunA17_Chr5g0412271 38.028 142 80 5 1 138 1 138 3.44e-15 73.9
Msa1211970 MtrunA17_Chr5g0412461 48.571 70 34 1 1 70 1 68 4.28e-15 73.6
Msa1211970 MtrunA17_Chr7g0246431 31.176 170 85 5 1 154 1 154 4.30e-15 73.2
Msa1211970 MtrunA17_Chr4g0020221 46.479 71 36 1 1 71 1 69 5.92e-15 73.6
Msa1211970 MtrunA17_Chr2g0279821 46.479 71 36 1 1 71 1 69 7.06e-15 73.2
Msa1211970 MtrunA17_Chr2g0308251 54.717 53 24 0 1 53 1 53 7.31e-15 69.3
Msa1211970 MtrunA17_Chr3g0142191 56.604 53 23 0 1 53 1 53 7.80e-15 72.8
Msa1211970 MtrunA17_Chr5g0420081 45.570 79 42 1 1 79 1 78 8.15e-15 72.8
Msa1211970 MtrunA17_Chr5g0427921 50.943 53 26 0 1 53 1 53 8.22e-15 68.2
Msa1211970 MtrunA17_Chr2g0284911 45.070 71 37 1 1 71 16 84 8.43e-15 73.2
Msa1211970 MtrunA17_Chr8g0351041 31.373 153 100 3 1 150 1 151 9.79e-15 70.9
Msa1211970 MtrunA17_Chr4g0057151 34.783 161 89 6 1 153 1 153 1.19e-14 71.6
Msa1211970 MtrunA17_Chr8g0366231 43.038 79 44 1 1 79 1 78 1.23e-14 72.4
Msa1211970 MtrunA17_Chr1g0164791 45.070 71 39 0 1 71 1 71 1.33e-14 72.4
Msa1211970 MtrunA17_Chr3g0097101 54.717 53 24 0 1 53 16 68 1.84e-14 72.0
Msa1211970 MtrunA17_Chr4g0061691 43.038 79 44 1 1 79 1 78 2.12e-14 71.6
Msa1211970 MtrunA17_Chr3g0077501 54.717 53 24 0 1 53 1 53 2.49e-14 71.2
Msa1211970 MtrunA17_Chr4g0049901 48.571 70 34 1 1 70 27 94 2.94e-14 71.2
Msa1211970 MtrunA17_Chr7g0246381 54.717 53 24 0 1 53 1 53 4.74e-14 66.6
Msa1211970 MtrunA17_Chr8g0380021 52.830 53 25 0 1 53 17 69 5.53e-14 70.9
Msa1211970 MtrunA17_Chr4g0049541 45.946 74 38 1 1 74 1 72 5.93e-14 70.1
Msa1211970 MtrunA17_Chr5g0411691 43.662 71 38 1 1 71 1 69 7.24e-14 70.1
Msa1211970 MtrunA17_Chr1g0204111 46.575 73 37 1 1 73 17 87 1.01e-13 70.1
Msa1211970 MtrunA17_Chr8g0351031 30.769 156 103 3 1 153 1 154 1.73e-13 68.9
Msa1211970 MtrunA17_Chr8g0377561 50.943 53 26 0 1 53 1 53 2.13e-13 65.5
Msa1211970 MtrunA17_Chr1g0175611 30.822 146 74 4 1 144 1 121 2.94e-13 67.0
Msa1211970 MtrunA17_Chr4g0061671 50.943 53 26 0 1 53 1 53 3.77e-13 67.0
Msa1211970 MtrunA17_Chr8g0351051 52.830 53 25 0 1 53 1 53 4.23e-13 68.2
Msa1211970 MtrunA17_Chr7g0220111 50.943 53 26 0 1 53 1 53 6.05e-13 67.8
Msa1211970 MtrunA17_Chr5g0420091 52.830 53 25 0 1 53 1 53 7.25e-13 67.0
Msa1211970 MtrunA17_Chr1g0208561 42.667 75 41 1 2 76 9 81 7.46e-13 67.0
Msa1211970 MtrunA17_Chr3g0089141 42.667 75 41 1 2 76 9 81 8.38e-13 67.0
Msa1211970 MtrunA17_Chr8g0379021 51.923 52 25 0 2 53 12 63 8.39e-13 65.9
Msa1211970 MtrunA17_Chr5g0404951 31.973 147 91 2 1 142 1 143 9.35e-13 67.0
Msa1211970 MtrunA17_Chr7g0220121 29.932 147 92 4 1 142 1 141 9.93e-13 67.4
Msa1211970 MtrunA17_Chr1g0166611 37.363 91 51 2 16 104 20 106 1.06e-12 64.7
Msa1211970 MtrunA17_Chr6g0455511 50.943 53 26 0 1 53 1 53 1.95e-12 66.2
Msa1211970 MtrunA17_Chr3g0122251 50.943 53 26 0 1 53 1 53 2.31e-12 65.9
Msa1211970 MtrunA17_Chr6g0474371 43.243 74 39 2 1 73 1 72 2.88e-12 64.7
Msa1211970 MtrunA17_Chr4g0052081 53.704 54 25 0 1 54 1 54 2.98e-12 64.3
Msa1211970 MtrunA17_Chr4g0018421 41.333 75 43 1 1 75 1 74 3.44e-12 64.7
Msa1211970 MtrunA17_Chr2g0333981 50.943 53 26 0 1 53 11 63 3.49e-12 64.3
Msa1211970 MtrunA17_Chr1g0208581 38.636 88 51 2 2 89 9 93 5.14e-12 64.7
Msa1211970 MtrunA17_Chr4g0074101 40.260 77 44 1 1 77 1 75 9.66e-12 63.2
Msa1211970 MtrunA17_Chr1g0175601 36.709 79 48 1 1 79 1 77 1.22e-11 62.8
Msa1211970 MtrunA17_Chr5g0419601 28.859 149 82 3 1 148 8 133 1.29e-11 63.5
Msa1211970 MtrunA17_Chr3g0099421 39.326 89 49 3 2 89 34 118 1.64e-11 63.5
Msa1211970 MtrunA17_Chr4g0018951 31.538 130 74 3 14 133 24 148 2.13e-11 61.6
Msa1211970 MtrunA17_Chr8g0355091 38.202 89 50 3 2 89 9 93 2.24e-11 63.2
Msa1211970 MtrunA17_Chr8g0376821 46.296 54 29 0 1 54 1 54 2.42e-11 62.0
Msa1211970 MtrunA17_Chr1g0206701 38.202 89 50 3 2 89 9 93 2.70e-11 62.8
Msa1211970 MtrunA17_Chr2g0317451 38.043 92 54 2 2 93 9 97 2.84e-11 62.8
Msa1211970 MtrunA17_Chr1g0180591 37.662 77 46 1 1 77 1 75 2.86e-11 61.6
Msa1211970 MtrunA17_Chr2g0317481 38.043 92 54 2 2 93 9 97 3.09e-11 62.8
Msa1211970 MtrunA17_Chr8g0357771 28.221 163 86 4 1 161 1 134 3.63e-11 61.2
Msa1211970 MtrunA17_Chr3g0099411 38.202 89 50 3 2 89 9 93 4.95e-11 61.6
Msa1211970 MtrunA17_Chr2g0292791 38.202 89 50 3 2 89 9 93 5.67e-11 62.0
Msa1211970 MtrunA17_Chr1g0206721 38.202 89 50 3 2 89 9 93 6.12e-11 61.6
Msa1211970 MtrunA17_Chr1g0169761 46.296 54 29 0 1 54 1 54 6.15e-11 60.8
Msa1211970 MtrunA17_Chr2g0325971 40.000 75 43 1 2 76 9 81 6.63e-11 61.6
Msa1211970 MtrunA17_Chr4g0052061 48.148 54 28 0 1 54 1 54 6.73e-11 60.1
Msa1211970 MtrunA17_Chr5g0422941 42.857 77 41 2 2 77 9 83 7.05e-11 61.6
Msa1211970 MtrunA17_Chr1g0188671 42.857 77 41 2 2 77 47 121 8.55e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1211970 AT1G18750.4 47.841 301 112 8 1 270 1 287 4.15e-81 251
Msa1211970 AT1G18750.1 47.508 301 113 7 1 270 1 287 8.31e-81 251
Msa1211970 AT2G03060.3 45.614 285 105 6 1 250 1 270 4.25e-71 226
Msa1211970 AT2G03060.7 45.614 285 105 6 1 250 1 270 4.25e-71 226
Msa1211970 AT2G03060.1 45.614 285 105 6 1 250 1 270 4.25e-71 226
Msa1211970 AT2G03060.2 45.614 285 105 6 1 250 1 270 5.61e-71 226
Msa1211970 AT1G18750.3 41.916 334 116 12 1 270 1 320 3.33e-66 214
Msa1211970 AT1G69540.1 39.088 307 131 8 1 266 1 292 1.45e-57 190
Msa1211970 AT1G69540.2 41.264 269 121 5 1 234 1 267 2.45e-57 190
Msa1211970 AT1G18750.2 40.392 255 107 8 47 270 1 241 5.78e-50 170
Msa1211970 AT2G03060.6 34.804 204 83 6 82 250 24 212 3.12e-25 103
Msa1211970 AT2G03060.5 34.804 204 83 6 82 250 24 212 3.12e-25 103
Msa1211970 AT2G03060.4 34.804 204 83 6 82 250 24 212 3.12e-25 103
Msa1211970 AT1G77980.1 44.828 116 51 3 1 104 1 115 3.80e-24 101
Msa1211970 AT1G22130.1 55.696 79 34 1 1 79 1 78 3.54e-23 98.6
Msa1211970 AT1G77950.3 43.220 118 52 4 1 108 1 113 6.57e-22 93.6
Msa1211970 AT1G77950.2 43.220 118 52 4 1 108 1 113 6.57e-22 93.6
Msa1211970 AT1G77950.1 43.220 118 52 4 1 108 1 113 6.57e-22 93.6
Msa1211970 AT1G77950.4 43.220 118 52 4 1 108 1 113 6.57e-22 93.6
Msa1211970 AT2G26320.1 47.561 82 43 0 1 82 17 98 3.50e-19 82.0
Msa1211970 AT1G18750.6 33.735 166 91 7 110 270 46 197 1.52e-18 84.7
Msa1211970 AT1G18750.5 33.133 166 92 6 110 270 34 185 1.65e-18 84.3
Msa1211970 AT2G03710.1 38.462 143 73 5 1 133 1 138 1.30e-16 79.0
Msa1211970 AT2G03710.2 38.462 143 73 5 1 133 1 138 1.38e-16 78.6
Msa1211970 AT2G03710.3 38.462 143 73 5 1 133 1 138 4.36e-16 75.9
Msa1211970 AT5G13790.1 38.384 99 57 2 1 97 1 97 6.04e-16 77.0
Msa1211970 AT4G24540.1 47.222 72 36 1 1 72 1 70 9.44e-16 75.5
Msa1211970 AT5G23260.3 47.887 71 37 0 1 71 1 71 1.53e-15 75.5
Msa1211970 AT5G23260.2 47.887 71 37 0 1 71 1 71 1.78e-15 75.5
Msa1211970 AT5G23260.1 47.887 71 37 0 1 71 17 87 2.22e-15 75.5
Msa1211970 AT5G23260.4 47.887 71 37 0 1 71 17 87 2.24e-15 75.5
Msa1211970 AT3G57390.3 42.353 85 47 1 1 85 1 83 2.57e-15 74.7
Msa1211970 AT3G57390.1 42.353 85 47 1 1 85 1 83 3.35e-15 74.7
Msa1211970 AT5G13790.2 43.056 72 39 1 1 72 1 70 4.63e-15 74.7
Msa1211970 AT4G09960.2 30.667 150 90 5 1 143 1 143 5.33e-15 73.6
Msa1211970 AT3G57230.2 44.444 72 38 1 1 72 1 70 6.71e-15 71.2
Msa1211970 AT4G09960.1 29.878 164 96 6 1 157 1 152 9.44e-15 73.2
Msa1211970 AT4G09960.5 29.878 164 96 6 1 157 11 162 9.60e-15 73.2
Msa1211970 AT4G09960.6 29.878 164 96 6 1 157 2 153 1.05e-14 72.8
Msa1211970 AT1G26310.1 43.038 79 44 1 1 79 1 78 1.63e-14 72.8
Msa1211970 AT3G57230.1 44.444 72 38 1 1 72 1 70 1.86e-14 72.4
Msa1211970 AT3G57230.4 44.444 72 38 1 1 72 1 70 1.86e-14 72.4
Msa1211970 AT5G51870.2 34.932 146 72 6 1 132 1 137 1.93e-14 70.9
Msa1211970 AT2G14210.1 43.590 78 43 1 1 78 1 77 1.97e-14 72.0
Msa1211970 AT2G14210.2 43.590 78 43 1 1 78 1 77 2.14e-14 72.0
Msa1211970 AT2G22540.3 45.714 70 36 1 1 70 1 68 2.35e-14 72.0
Msa1211970 AT2G22540.1 45.714 70 36 1 1 70 1 68 2.35e-14 72.0
Msa1211970 AT2G45660.1 32.484 157 98 4 1 153 1 153 2.35e-14 71.6
Msa1211970 AT2G45660.2 32.278 158 99 4 1 154 1 154 2.38e-14 70.1
Msa1211970 AT4G37940.3 45.070 71 37 1 1 71 1 69 2.46e-14 70.5
Msa1211970 AT3G61120.1 28.309 272 156 11 1 261 1 244 2.66e-14 72.0
Msa1211970 AT4G37940.4 45.070 71 37 1 1 71 1 69 3.03e-14 71.2
Msa1211970 AT4G09960.3 29.878 164 96 6 1 157 27 178 3.07e-14 72.0
Msa1211970 AT4G37435.1 45.070 71 38 1 1 71 1 70 3.57e-14 70.5
Msa1211970 AT5G51870.5 34.932 146 72 6 1 132 24 160 4.03e-14 70.5
Msa1211970 AT4G37940.1 45.070 71 37 1 1 71 1 69 4.06e-14 71.2
Msa1211970 AT1G69120.2 43.038 79 44 1 1 79 1 78 4.28e-14 71.2
Msa1211970 AT1G69120.1 43.038 79 44 1 1 79 1 78 5.53e-14 71.2
Msa1211970 AT2G22540.2 52.830 53 25 0 1 53 1 53 5.54e-14 70.9
Msa1211970 AT5G51870.1 34.932 146 72 6 1 132 1 137 5.89e-14 70.5
Msa1211970 AT4G11880.2 29.381 194 111 9 1 187 1 175 7.13e-14 69.3
Msa1211970 AT4G11880.3 29.381 194 111 9 1 187 1 175 7.13e-14 69.3
Msa1211970 AT5G51870.3 34.932 146 72 6 1 132 11 147 7.32e-14 70.5
Msa1211970 AT5G51870.4 34.932 146 72 6 1 132 1 137 7.76e-14 70.1
Msa1211970 AT3G58780.2 52.830 53 25 0 1 53 16 68 1.05e-13 70.1
Msa1211970 AT1G71692.1 42.500 80 45 1 1 80 1 79 1.20e-13 69.3
Msa1211970 AT3G58780.1 52.830 53 25 0 1 53 16 68 1.21e-13 70.1
Msa1211970 AT2G42830.1 52.830 53 25 0 1 53 16 68 1.22e-13 70.1
Msa1211970 AT2G42830.2 52.830 53 25 0 1 53 16 68 1.27e-13 70.1
Msa1211970 AT3G54340.1 29.008 131 90 2 1 131 1 128 1.32e-13 69.7
Msa1211970 AT3G58780.5 52.830 53 25 0 1 53 22 74 1.36e-13 70.1
Msa1211970 AT4G09960.4 29.878 164 96 6 1 157 96 247 1.53e-13 70.9
Msa1211970 AT3G58780.3 52.830 53 25 0 1 53 16 68 2.02e-13 70.1
Msa1211970 AT4G18960.1 53.846 52 24 0 2 53 18 69 2.10e-13 69.7
Msa1211970 AT5G60910.1 34.351 131 77 4 1 123 1 130 2.36e-13 69.3
Msa1211970 AT2G22630.1 43.750 80 41 2 1 78 1 78 2.73e-13 68.9
Msa1211970 AT2G22630.2 43.750 80 41 2 1 78 1 78 2.73e-13 68.9
Msa1211970 AT3G58780.4 52.830 53 25 0 1 53 16 68 2.79e-13 69.7
Msa1211970 AT5G20240.2 36.782 87 55 0 1 87 1 87 3.13e-13 67.0
Msa1211970 AT5G62165.14 40.789 76 43 1 1 76 1 74 3.83e-13 65.5
Msa1211970 AT5G10140.2 52.830 53 25 0 1 53 1 53 3.98e-13 67.0
Msa1211970 AT5G10140.1 52.830 53 25 0 1 53 1 53 4.21e-13 67.8
Msa1211970 AT5G20240.1 50.943 53 26 0 1 53 1 53 4.72e-13 67.8
Msa1211970 AT5G10140.4 52.830 53 25 0 1 53 1 53 5.02e-13 67.0
Msa1211970 AT5G10140.3 52.830 53 25 0 1 53 1 53 5.15e-13 67.0
Msa1211970 AT3G30260.1 40.845 71 41 1 1 71 1 70 5.22e-13 68.2
Msa1211970 AT2G45650.1 52.830 53 25 0 1 53 1 53 7.95e-13 67.8
Msa1211970 AT5G62165.3 30.247 162 99 4 1 155 1 155 1.88e-12 66.2
Msa1211970 AT5G62165.1 30.247 162 99 4 1 155 1 155 1.88e-12 66.2
Msa1211970 AT5G62165.2 30.247 162 99 4 1 155 1 155 1.88e-12 66.2
Msa1211970 AT4G11880.4 52.830 53 25 0 1 53 1 53 2.28e-12 65.9
Msa1211970 AT4G11880.1 52.830 53 25 0 1 53 1 53 2.28e-12 65.9
Msa1211970 AT1G24260.3 50.943 53 26 0 1 53 1 53 2.28e-12 66.2
Msa1211970 AT5G62165.6 40.789 76 43 1 1 76 1 74 2.86e-12 64.3
Msa1211970 AT5G62165.9 40.789 76 43 1 1 76 1 74 2.86e-12 64.3
Msa1211970 AT5G62165.7 40.789 76 43 1 1 76 1 74 2.86e-12 64.3
Msa1211970 AT5G62165.8 40.789 76 43 1 1 76 1 74 2.86e-12 64.3
Msa1211970 AT5G62165.13 40.789 76 43 1 1 76 1 74 2.86e-12 64.3
Msa1211970 AT1G24260.1 50.943 53 26 0 1 53 1 53 2.87e-12 66.2
Msa1211970 AT1G24260.2 50.943 53 26 0 1 53 1 53 2.90e-12 66.2
Msa1211970 AT5G62165.17 43.662 71 38 1 1 71 1 69 3.07e-12 64.3
Msa1211970 AT5G62165.12 43.662 71 38 1 1 71 1 69 3.07e-12 64.3
Msa1211970 AT5G62165.11 43.662 71 38 1 1 71 1 69 3.07e-12 64.3
Msa1211970 AT5G15800.1 50.943 53 26 0 1 53 1 53 3.19e-12 66.2
Msa1211970 AT4G22950.3 30.435 161 99 5 1 155 1 154 3.23e-12 65.5
Msa1211970 AT4G22950.1 30.435 161 99 5 1 155 1 154 3.23e-12 65.5
Msa1211970 AT5G62165.10 40.789 76 43 1 1 76 1 74 3.79e-12 65.1
Msa1211970 AT5G62165.4 40.789 76 43 1 1 76 1 74 3.79e-12 65.1
Msa1211970 AT5G15800.2 50.943 53 26 0 1 53 1 53 4.13e-12 65.9
Msa1211970 AT3G02310.2 50.943 53 26 0 1 53 1 53 5.41e-12 64.7
Msa1211970 AT5G51860.2 42.466 73 40 1 1 73 1 71 5.75e-12 64.7
Msa1211970 AT3G02310.1 50.943 53 26 0 1 53 1 53 6.27e-12 65.1
Msa1211970 AT5G51860.1 42.466 73 40 1 1 73 1 71 6.31e-12 64.7
Msa1211970 AT5G65050.2 50.943 53 26 0 1 53 1 53 8.21e-12 63.5
Msa1211970 AT4G22950.2 50.943 53 26 0 1 53 1 53 8.26e-12 63.5
Msa1211970 AT2G34440.1 26.415 159 101 3 1 153 1 149 1.29e-11 62.8
Msa1211970 AT5G65060.2 30.519 154 89 3 1 154 1 136 1.48e-11 63.2
Msa1211970 AT5G65050.3 43.662 71 39 1 1 71 1 70 1.63e-11 63.2
Msa1211970 AT5G65050.1 43.662 71 39 1 1 71 1 70 1.74e-11 62.8
Msa1211970 AT5G65050.5 43.662 71 39 1 1 71 1 70 1.93e-11 62.8
Msa1211970 AT5G65070.4 47.170 53 28 0 1 53 1 53 2.03e-11 61.6
Msa1211970 AT5G65070.1 47.170 53 28 0 1 53 1 53 3.69e-11 62.0
Msa1211970 AT3G66656.1 46.296 54 29 0 1 54 1 54 4.11e-11 61.6
Msa1211970 AT1G01530.1 48.148 54 28 0 1 54 6 59 4.19e-11 62.8
Msa1211970 AT4G36590.1 43.662 71 38 1 2 72 7 75 5.63e-11 62.4
Msa1211970 AT5G65070.3 47.170 53 28 0 1 53 1 53 6.04e-11 62.0
Msa1211970 AT5G65070.5 47.170 53 28 0 1 53 1 53 6.35e-11 61.6
Msa1211970 AT5G65070.2 47.170 53 28 0 1 53 1 53 6.68e-11 62.0

Find 82 sgRNAs with CRISPR-Local

Find 152 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATTGAAGATAAAGAAAT+TGG 0.209657 8_1:+71796754 Msa1211970:CDS
GTTCTAATTGAGCAGGAAAA+TGG 0.237423 8_1:+71797421 Msa1211970:intron
CCAAGCTATTCTGGTTATAC+TGG 0.263985 8_1:+71799141 Msa1211970:CDS
TGCACATTTAAGTAAGGATT+TGG 0.267580 8_1:-71799249 None:intergenic
CCAAAATCACTATTTGAAAA+TGG 0.281681 8_1:+71799390 Msa1211970:CDS
TTGAAAATGGACACCAGTTC+TGG 0.282537 8_1:+71799403 Msa1211970:CDS
AACCAAAGTTTATGTCATTC+AGG 0.285801 8_1:+71798849 Msa1211970:CDS
TTGTAGACCAGACATCATTA+AGG 0.306825 8_1:-71798765 None:intergenic
ATTTCACTCCCAAGCTATTC+TGG 0.310454 8_1:+71799132 Msa1211970:CDS
GTCCACAAGAAAGGGCTAAA+AGG 0.330693 8_1:+71797330 Msa1211970:CDS
GGTACCTTGAATGAGTTAAA+TGG 0.339481 8_1:+71799222 Msa1211970:CDS
CGCATTCAAGTGACATTAGT+TGG 0.358372 8_1:-71798628 None:intergenic
TGTAAAGATACAAGATTTCC+TGG 0.370430 8_1:+71797608 Msa1211970:CDS
CCCTTTCTTGTGGACTAAGT+TGG 0.379881 8_1:-71797322 None:intergenic
ACATGTCACTACTTTGGGTC+AGG 0.387955 8_1:+71799194 Msa1211970:CDS
CCTTTCTTGTGGACTAAGTT+GGG 0.389274 8_1:-71797321 None:intergenic
AAGGGTAAAGTCATCCCTTC+TGG 0.392867 8_1:-71798746 None:intergenic
AGGAAAGCCTACGTTATTAC+AGG 0.394098 8_1:+71796895 Msa1211970:CDS
CACTGTTGCACATTTAAGTA+AGG 0.404816 8_1:-71799255 None:intergenic
CTCTCCACATGTCACTACTT+TGG 0.406741 8_1:+71799188 Msa1211970:CDS
TCTCAGTTATTGGAGTAATC+TGG 0.414099 8_1:+71798380 Msa1211970:intron
TCTCCACATGTCACTACTTT+GGG 0.420528 8_1:+71799189 Msa1211970:CDS
ACTTTACCCTTAATGATGTC+TGG 0.424560 8_1:+71798758 Msa1211970:CDS
CCCAACTTAGTCCACAAGAA+AGG 0.426307 8_1:+71797321 Msa1211970:CDS
ATCATGATCCAATTTCTTGA+AGG 0.431577 8_1:-71797586 None:intergenic
CTTGGAACATCTTAGACAAA+TGG 0.436675 8_1:+71798416 Msa1211970:CDS
TTATTTGATTTGATATTGAT+TGG 0.438851 8_1:-71799333 None:intergenic
GTTCACTAGGTAACATCAAC+TGG 0.439721 8_1:-71798829 None:intergenic
CACCTGAATGACATAAACTT+TGG 0.443645 8_1:-71798851 None:intergenic
CAATCGATTGTCTATACAAA+AGG 0.445203 8_1:+71798461 Msa1211970:CDS
TGTAGACCAGACATCATTAA+GGG 0.446718 8_1:-71798764 None:intergenic
TTCACTTCCTCGAGATCTTG+TGG 0.468977 8_1:-71799300 None:intergenic
GATCATAATTGTTATTAACT+TGG 0.470376 8_1:-71799365 None:intergenic
AAGAATCTCAACCTTTGTCT+TGG 0.471192 8_1:+71798786 Msa1211970:CDS
TACAAGATTTCCTGGGTTCA+AGG 0.476006 8_1:+71797616 Msa1211970:CDS
ATTTCCATTTAACTCATTCA+AGG 0.477610 8_1:-71799226 None:intergenic
TTATACTGGGAACTGCAAAC+TGG 0.478109 8_1:+71799155 Msa1211970:CDS
ATTGCTATGTATAACGAGAA+TGG 0.479596 8_1:+71799450 Msa1211970:CDS
TGGGAACTGCAAACTGGAGG+TGG 0.480619 8_1:+71799161 Msa1211970:CDS
CAGTATAACCAGAATAGCTT+GGG 0.488834 8_1:-71799140 None:intergenic
TTGATTTGATATTGATTGGT+TGG 0.490496 8_1:-71799329 None:intergenic
TCCTCGAGATCTTGTGGAGG+AGG 0.496372 8_1:-71799294 None:intergenic
AAAACTACATGCTTACCCTA+TGG 0.497229 8_1:-71799476 None:intergenic
ACTACTTTGGGTCAGGGTGG+TGG 0.504351 8_1:+71799201 Msa1211970:CDS
TCTGGAGAAGATCAATAACT+TGG 0.508786 8_1:+71798398 Msa1211970:CDS
CATTTGTAGAATTCCAGAAC+TGG 0.509091 8_1:-71799416 None:intergenic
CCAGTATAACCAGAATAGCT+TGG 0.510057 8_1:-71799141 None:intergenic
GTCACTTGAATGCGTTAACC+AGG 0.524046 8_1:+71798637 Msa1211970:CDS
ACTTATTCGAAGCGGAAAAG+TGG 0.527998 8_1:+71796800 Msa1211970:CDS
CCAACTTAGTCCACAAGAAA+GGG 0.532263 8_1:+71797322 Msa1211970:CDS
CAAGCTATTCTGGTTATACT+GGG 0.535943 8_1:+71799142 Msa1211970:CDS
GACAAATGGAAGACTCACTC+AGG 0.540615 8_1:+71798430 Msa1211970:CDS
CCTTTGTCTTGGCTTCTAAG+TGG 0.542337 8_1:+71798797 Msa1211970:CDS
ATAACGAGAATGGTTTCCAT+AGG 0.556985 8_1:+71799460 Msa1211970:CDS
ATTGATTCATAGTTACCAGA+AGG 0.565773 8_1:+71798731 Msa1211970:intron
CATGTCACTACTTTGGGTCA+GGG 0.574709 8_1:+71799195 Msa1211970:CDS
CTGTTGGAGAAAACATGAGA+AGG 0.576749 8_1:-71796874 None:intergenic
CTTATTCGAAGCGGAAAAGT+GGG 0.585417 8_1:+71796801 Msa1211970:CDS
CAATCACTTACCTTGAACCC+AGG 0.589742 8_1:-71797626 None:intergenic
ATTACGTTACATAGTGACAA+TGG 0.595952 8_1:+71799081 Msa1211970:intron
CGTTCTCCCTGTAATAACGT+AGG 0.597125 8_1:-71796902 None:intergenic
GTAAAGATACAAGATTTCCT+GGG 0.597719 8_1:+71797609 Msa1211970:CDS
TAACGAGAATGGTTTCCATA+GGG 0.598896 8_1:+71799461 Msa1211970:CDS
CCCTCCTCCACAAGATCTCG+AGG 0.601305 8_1:+71799293 Msa1211970:CDS
CCTCGAGATCTTGTGGAGGA+GGG 0.602901 8_1:-71799293 None:intergenic
CAATATCAAATCAAATAACG+TGG 0.608707 8_1:+71799338 Msa1211970:CDS
ATAGCTTGGGAGTGAAATGT+TGG 0.609782 8_1:-71799127 None:intergenic
GTCACTACTTTGGGTCAGGG+TGG 0.612222 8_1:+71799198 Msa1211970:CDS
GACATAAACTTTGGTTCACT+AGG 0.613858 8_1:-71798842 None:intergenic
GGGAACTGCAAACTGGAGGT+GGG 0.623032 8_1:+71799162 Msa1211970:CDS
AATAACGTAGGCTTTCCTGT+TGG 0.623309 8_1:-71796890 None:intergenic
AATTCTACAAATGACTCTTG+TGG 0.631946 8_1:+71799426 Msa1211970:CDS
TTGATTCATAGTTACCAGAA+GGG 0.636080 8_1:+71798732 Msa1211970:intron
ACTTCCTCGAGATCTTGTGG+AGG 0.636550 8_1:-71799297 None:intergenic
TACTGGGAACTGCAAACTGG+AGG 0.648889 8_1:+71799158 Msa1211970:CDS
GCTTCGAATAAGTCACATGT+CGG 0.667125 8_1:-71796790 None:intergenic
ACAAATGGAAGACTCACTCA+GGG 0.670210 8_1:+71798431 Msa1211970:CDS
TGACCCAAAGTAGTGACATG+TGG 0.672596 8_1:-71799192 None:intergenic
GGAAAGCCTACGTTATTACA+GGG 0.679926 8_1:+71796896 Msa1211970:CDS
GACATGTGACTTATTCGAAG+CGG 0.683369 8_1:+71796792 Msa1211970:CDS
CCACTTAGAAGCCAAGACAA+AGG 0.694579 8_1:-71798797 None:intergenic
CGTTATTACAGGGAGAACGA+AGG 0.718082 8_1:+71796906 Msa1211970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTCAAATATTTTAAAAAAA+TGG + chr8_1:71797108-71797127 Msa1211970:intron 10.0%
!!! TAGTATATCTATTTTTTTTA+AGG - chr8_1:71797171-71797190 None:intergenic 10.0%
!! ATAATAATAGATAGAAAAAA+GGG - chr8_1:71798681-71798700 None:intergenic 10.0%
!! TATAATAATAGATAGAAAAA+AGG - chr8_1:71798682-71798701 None:intergenic 10.0%
!! TAAATTGAAGATAAAGAAAT+TGG + chr8_1:71796754-71796773 Msa1211970:CDS 15.0%
!! TTTATTCACAAATTATCAAA+TGG + chr8_1:71797746-71797765 Msa1211970:intron 15.0%
!! TTATTCACAAATTATCAAAT+GGG + chr8_1:71797747-71797766 Msa1211970:intron 15.0%
!!! TATTGATATTTTGATTTCAT+CGG + chr8_1:71798585-71798604 Msa1211970:intron 15.0%
!!! TTATTTGATTTGATATTGAT+TGG - chr8_1:71799336-71799355 None:intergenic 15.0%
!!! ACTTATCATTTTAATCTCAA+AGG + chr8_1:71797080-71797099 Msa1211970:intron 20.0%
!!! ATTTTATTTTTCCAGCAATA+TGG + chr8_1:71797277-71797296 Msa1211970:intron 20.0%
!! AAAGTAATATATGAATTACG+AGG - chr8_1:71797476-71797495 None:intergenic 20.0%
!!! TTTGGTCTTGTTTAAAATTT+AGG + chr8_1:71797551-71797570 Msa1211970:intron 20.0%
!! AATCTTCAAAATCATTTACA+AGG - chr8_1:71797676-71797695 None:intergenic 20.0%
!! TGCAATATGAAAATTAAAAC+AGG - chr8_1:71797703-71797722 None:intergenic 20.0%
!! CGAAAAATTTAAATTGAACA+AGG - chr8_1:71798077-71798096 None:intergenic 20.0%
!! TGATAGTATTTGACATAATT+TGG - chr8_1:71798316-71798335 None:intergenic 20.0%
!! TGTCAAATACTATCATAATT+TGG + chr8_1:71798321-71798340 Msa1211970:intron 20.0%
!! GTCAAATACTATCATAATTT+GGG + chr8_1:71798322-71798341 Msa1211970:intron 20.0%
!! ATATGTAATATCTCAGTTAT+TGG + chr8_1:71798370-71798389 Msa1211970:intron 20.0%
!! TCTATACAAAAGGTAATATT+TGG + chr8_1:71798471-71798490 Msa1211970:intron 20.0%
!! AAAATACACTATTATTTACC+TGG - chr8_1:71798658-71798677 None:intergenic 20.0%
!!! GATCATAATTGTTATTAACT+TGG - chr8_1:71799368-71799387 None:intergenic 20.0%
! CGAAGGTAATGTAATAATAA+CGG + chr8_1:71796923-71796942 Msa1211970:intron 25.0%
!! TTTCTCATTTTATCACAAGA+AGG - chr8_1:71796998-71797017 None:intergenic 25.0%
! CTTGTGATAAAATGAGAAAA+TGG + chr8_1:71796999-71797018 Msa1211970:intron 25.0%
!!! ATCATTTTAATCTCAAAGGA+CGG + chr8_1:71797084-71797103 Msa1211970:intron 25.0%
!!! ACTTTTACACACTTTAAAGA+TGG - chr8_1:71797208-71797227 None:intergenic 25.0%
! TCAGTCATTGCTTAAAAATT+TGG + chr8_1:71797533-71797552 Msa1211970:intron 25.0%
! GAAAAAAACCTTCAAGAAAT+TGG + chr8_1:71797578-71797597 Msa1211970:CDS 25.0%
! TACACACTCATAATTAATAC+AGG - chr8_1:71798042-71798061 None:intergenic 25.0%
!!! CGACAAACACATTTTTTTTT+GGG - chr8_1:71798249-71798268 None:intergenic 25.0%
!!! TCGACAAACACATTTTTTTT+TGG - chr8_1:71798250-71798269 None:intergenic 25.0%
!! AGTTTGTACCAAAAAAGTAT+AGG - chr8_1:71798275-71798294 None:intergenic 25.0%
!! TAATCACAACGATTTTCTAA+GGG - chr8_1:71798546-71798565 None:intergenic 25.0%
!! TTAATCACAACGATTTTCTA+AGG - chr8_1:71798547-71798566 None:intergenic 25.0%
!! AAAGAGCTTTATAACAAAAG+TGG + chr8_1:71798900-71798919 Msa1211970:intron 25.0%
! ATTTCCATTTAACTCATTCA+AGG - chr8_1:71799229-71799248 None:intergenic 25.0%
!! TTGATTTGATATTGATTGGT+TGG - chr8_1:71799332-71799351 None:intergenic 25.0%
! CAATATCAAATCAAATAACG+TGG + chr8_1:71799338-71799357 Msa1211970:CDS 25.0%
!! CCATTTTCAAATAGTGATTT+TGG - chr8_1:71799393-71799412 None:intergenic 25.0%
! CCAAAATCACTATTTGAAAA+TGG + chr8_1:71799390-71799409 Msa1211970:CDS 25.0%
TTAAAGTGTGTAAAAGTCGA+AGG + chr8_1:71797211-71797230 Msa1211970:intron 30.0%
!! TTATTTTTCCAGCAATATGG+AGG + chr8_1:71797280-71797299 Msa1211970:intron 30.0%
! TTTTCTTGTTCTAATTGAGC+AGG + chr8_1:71797414-71797433 Msa1211970:intron 30.0%
ATCATGATCCAATTTCTTGA+AGG - chr8_1:71797589-71797608 None:intergenic 30.0%
TGTAAAGATACAAGATTTCC+TGG + chr8_1:71797608-71797627 Msa1211970:CDS 30.0%
GTAAAGATACAAGATTTCCT+GGG + chr8_1:71797609-71797628 Msa1211970:CDS 30.0%
!! ATTGCTTTAGAATCTTAAGC+TGG + chr8_1:71797776-71797795 Msa1211970:intron 30.0%
AGAATCTTAAGCTGGTAATT+AGG + chr8_1:71797784-71797803 Msa1211970:intron 30.0%
CAATTGAACTCATAACACTT+TGG - chr8_1:71797813-71797832 None:intergenic 30.0%
ATACAAAATTGGTAAGGTAG+AGG - chr8_1:71797998-71798017 None:intergenic 30.0%
AAGCACATACAAAATTGGTA+AGG - chr8_1:71798004-71798023 None:intergenic 30.0%
TTGCAAAGCACATACAAAAT+TGG - chr8_1:71798009-71798028 None:intergenic 30.0%
!!! TTTTTTGGGTGGTGTTTATT+TGG - chr8_1:71798235-71798254 None:intergenic 30.0%
!!! CAAACACATTTTTTTTTGGG+TGG - chr8_1:71798246-71798265 None:intergenic 30.0%
!!! TGTCGAAACCTATACTTTTT+TGG + chr8_1:71798264-71798283 Msa1211970:intron 30.0%
CAATCGATTGTCTATACAAA+AGG + chr8_1:71798461-71798480 Msa1211970:CDS 30.0%
! AGGTAATATTTGGTTTCATG+CGG + chr8_1:71798481-71798500 Msa1211970:intron 30.0%
! AATCACAACGATTTTCTAAG+GGG - chr8_1:71798545-71798564 None:intergenic 30.0%
! ATTGATTCATAGTTACCAGA+AGG + chr8_1:71798731-71798750 Msa1211970:intron 30.0%
TTGATTCATAGTTACCAGAA+GGG + chr8_1:71798732-71798751 Msa1211970:intron 30.0%
AACCAAAGTTTATGTCATTC+AGG + chr8_1:71798849-71798868 Msa1211970:CDS 30.0%
ATTACGTTACATAGTGACAA+TGG + chr8_1:71799081-71799100 Msa1211970:intron 30.0%
TGCACATTTAAGTAAGGATT+TGG - chr8_1:71799252-71799271 None:intergenic 30.0%
AATTCTACAAATGACTCTTG+TGG + chr8_1:71799426-71799445 Msa1211970:CDS 30.0%
ATTGCTATGTATAACGAGAA+TGG + chr8_1:71799450-71799469 Msa1211970:CDS 30.0%
GTTCTAATTGAGCAGGAAAA+TGG + chr8_1:71797421-71797440 Msa1211970:intron 35.0%
! AGATTCTCACTTGATGACTT+AGG - chr8_1:71797848-71797867 None:intergenic 35.0%
AAGTGAGAATCTTACAAGCT+CGG + chr8_1:71797856-71797875 Msa1211970:intron 35.0%
!! GTTTATTTGGTGTGAGCTAA+AGG - chr8_1:71798222-71798241 None:intergenic 35.0%
TCTCAGTTATTGGAGTAATC+TGG + chr8_1:71798380-71798399 Msa1211970:intron 35.0%
TCTGGAGAAGATCAATAACT+TGG + chr8_1:71798398-71798417 Msa1211970:CDS 35.0%
CTTGGAACATCTTAGACAAA+TGG + chr8_1:71798416-71798435 Msa1211970:CDS 35.0%
!!! GATATTTTGATTTCATCGGC+AGG + chr8_1:71798589-71798608 Msa1211970:intron 35.0%
ACTTTACCCTTAATGATGTC+TGG + chr8_1:71798758-71798777 Msa1211970:CDS 35.0%
TGTAGACCAGACATCATTAA+GGG - chr8_1:71798767-71798786 None:intergenic 35.0%
TTGTAGACCAGACATCATTA+AGG - chr8_1:71798768-71798787 None:intergenic 35.0%
AAGAATCTCAACCTTTGTCT+TGG + chr8_1:71798786-71798805 Msa1211970:CDS 35.0%
! GACATAAACTTTGGTTCACT+AGG - chr8_1:71798845-71798864 None:intergenic 35.0%
CACCTGAATGACATAAACTT+TGG - chr8_1:71798854-71798873 None:intergenic 35.0%
CAGTATAACCAGAATAGCTT+GGG - chr8_1:71799143-71799162 None:intergenic 35.0%
! CAAGCTATTCTGGTTATACT+GGG + chr8_1:71799142-71799161 Msa1211970:CDS 35.0%
GGTACCTTGAATGAGTTAAA+TGG + chr8_1:71799222-71799241 Msa1211970:CDS 35.0%
CACTGTTGCACATTTAAGTA+AGG - chr8_1:71799258-71799277 None:intergenic 35.0%
CATTTGTAGAATTCCAGAAC+TGG - chr8_1:71799419-71799438 None:intergenic 35.0%
ATAACGAGAATGGTTTCCAT+AGG + chr8_1:71799460-71799479 Msa1211970:CDS 35.0%
TAACGAGAATGGTTTCCATA+GGG + chr8_1:71799461-71799480 Msa1211970:CDS 35.0%
GCTTCGAATAAGTCACATGT+CGG - chr8_1:71796793-71796812 None:intergenic 40.0%
GACATGTGACTTATTCGAAG+CGG + chr8_1:71796792-71796811 Msa1211970:CDS 40.0%
ACTTATTCGAAGCGGAAAAG+TGG + chr8_1:71796800-71796819 Msa1211970:CDS 40.0%
CTTATTCGAAGCGGAAAAGT+GGG + chr8_1:71796801-71796820 Msa1211970:CDS 40.0%
CTGTTGGAGAAAACATGAGA+AGG - chr8_1:71796877-71796896 None:intergenic 40.0%
! CTTCTCATGTTTTCTCCAAC+AGG + chr8_1:71796875-71796894 Msa1211970:CDS 40.0%
AATAACGTAGGCTTTCCTGT+TGG - chr8_1:71796893-71796912 None:intergenic 40.0%
AGGAAAGCCTACGTTATTAC+AGG + chr8_1:71796895-71796914 Msa1211970:CDS 40.0%
GGAAAGCCTACGTTATTACA+GGG + chr8_1:71796896-71796915 Msa1211970:CDS 40.0%
AATGATCTCCTCCATATTGC+TGG - chr8_1:71797291-71797310 None:intergenic 40.0%
! CCTTTCTTGTGGACTAAGTT+GGG - chr8_1:71797324-71797343 None:intergenic 40.0%
CCAACTTAGTCCACAAGAAA+GGG + chr8_1:71797322-71797341 Msa1211970:CDS 40.0%
! AACCTTTTAGCCCTTTCTTG+TGG - chr8_1:71797335-71797354 None:intergenic 40.0%
TACAAGATTTCCTGGGTTCA+AGG + chr8_1:71797616-71797635 Msa1211970:CDS 40.0%
ATATTGCAGCAGTCAAACAG+TGG + chr8_1:71797715-71797734 Msa1211970:intron 40.0%
! TGAGTTCAATTGCCATTTGC+AGG + chr8_1:71797821-71797840 Msa1211970:intron 40.0%
CAGAAATACAACAGAGACTG+AGG + chr8_1:71797883-71797902 Msa1211970:intron 40.0%
ACAAATGGAAGACTCACTCA+GGG + chr8_1:71798431-71798450 Msa1211970:CDS 40.0%
!! ACAACGATTTTCTAAGGGGA+CGG - chr8_1:71798541-71798560 None:intergenic 40.0%
CGCATTCAAGTGACATTAGT+TGG - chr8_1:71798631-71798650 None:intergenic 40.0%
GTTCACTAGGTAACATCAAC+TGG - chr8_1:71798832-71798851 None:intergenic 40.0%
ATAGCTTGGGAGTGAAATGT+TGG - chr8_1:71799130-71799149 None:intergenic 40.0%
ATTTCACTCCCAAGCTATTC+TGG + chr8_1:71799132-71799151 Msa1211970:CDS 40.0%
CCAGTATAACCAGAATAGCT+TGG - chr8_1:71799144-71799163 None:intergenic 40.0%
! CCAAGCTATTCTGGTTATAC+TGG + chr8_1:71799141-71799160 Msa1211970:CDS 40.0%
TTATACTGGGAACTGCAAAC+TGG + chr8_1:71799155-71799174 Msa1211970:CDS 40.0%
TCTCCACATGTCACTACTTT+GGG + chr8_1:71799189-71799208 Msa1211970:CDS 40.0%
TTGAAAATGGACACCAGTTC+TGG + chr8_1:71799403-71799422 Msa1211970:CDS 40.0%
CGTTCTCCCTGTAATAACGT+AGG - chr8_1:71796905-71796924 None:intergenic 45.0%
CGTTATTACAGGGAGAACGA+AGG + chr8_1:71796906-71796925 Msa1211970:CDS 45.0%
CCCAACTTAGTCCACAAGAA+AGG + chr8_1:71797321-71797340 Msa1211970:CDS 45.0%
! CCCTTTCTTGTGGACTAAGT+TGG - chr8_1:71797325-71797344 None:intergenic 45.0%
GTCCACAAGAAAGGGCTAAA+AGG + chr8_1:71797330-71797349 Msa1211970:CDS 45.0%
CAATCACTTACCTTGAACCC+AGG - chr8_1:71797629-71797648 None:intergenic 45.0%
GATGACTTAGGTCCTGCAAA+TGG - chr8_1:71797836-71797855 None:intergenic 45.0%
!!! AGGTGCAACTTTGGAGCTTT+TGG + chr8_1:71797903-71797922 Msa1211970:intron 45.0%
! TTGGTGTGAGCTAAAGGCAT+GGG - chr8_1:71798216-71798235 None:intergenic 45.0%
! TTTGGTGTGAGCTAAAGGCA+TGG - chr8_1:71798217-71798236 None:intergenic 45.0%
GACAAATGGAAGACTCACTC+AGG + chr8_1:71798430-71798449 Msa1211970:CDS 45.0%
!! CAACGATTTTCTAAGGGGAC+GGG - chr8_1:71798540-71798559 None:intergenic 45.0%
GTCACTTGAATGCGTTAACC+AGG + chr8_1:71798637-71798656 Msa1211970:CDS 45.0%
AAGGGTAAAGTCATCCCTTC+TGG - chr8_1:71798749-71798768 None:intergenic 45.0%
CCACTTAGAAGCCAAGACAA+AGG - chr8_1:71798800-71798819 None:intergenic 45.0%
CCTTTGTCTTGGCTTCTAAG+TGG + chr8_1:71798797-71798816 Msa1211970:CDS 45.0%
CTCTCCACATGTCACTACTT+TGG + chr8_1:71799188-71799207 Msa1211970:CDS 45.0%
TGACCCAAAGTAGTGACATG+TGG - chr8_1:71799195-71799214 None:intergenic 45.0%
ACATGTCACTACTTTGGGTC+AGG + chr8_1:71799194-71799213 Msa1211970:CDS 45.0%
CATGTCACTACTTTGGGTCA+GGG + chr8_1:71799195-71799214 Msa1211970:CDS 45.0%
TTCACTTCCTCGAGATCTTG+TGG - chr8_1:71799303-71799322 None:intergenic 45.0%
!! AATAAAAATAAATATTTAGT+GGG - chr8_1:71797369-71797388 None:intergenic 5.0%
!! AAATAAAAATAAATATTTAG+TGG - chr8_1:71797370-71797389 None:intergenic 5.0%
TTGCAGCAGTCAAACAGTGG+AGG + chr8_1:71797718-71797737 Msa1211970:intron 50.0%
CAGAGACTGAGGTGCAACTT+TGG + chr8_1:71797894-71797913 Msa1211970:intron 50.0%
! TGGTGTGAGCTAAAGGCATG+GGG - chr8_1:71798215-71798234 None:intergenic 50.0%
TACTGGGAACTGCAAACTGG+AGG + chr8_1:71799158-71799177 Msa1211970:CDS 50.0%
ACTTCCTCGAGATCTTGTGG+AGG - chr8_1:71799300-71799319 None:intergenic 50.0%
! TTCTAAGGGGACGGGAACGA+TGG - chr8_1:71798532-71798551 None:intergenic 55.0%
TGGGAACTGCAAACTGGAGG+TGG + chr8_1:71799161-71799180 Msa1211970:CDS 55.0%
GGGAACTGCAAACTGGAGGT+GGG + chr8_1:71799162-71799181 Msa1211970:CDS 55.0%
GTCACTACTTTGGGTCAGGG+TGG + chr8_1:71799198-71799217 Msa1211970:CDS 55.0%
ACTACTTTGGGTCAGGGTGG+TGG + chr8_1:71799201-71799220 Msa1211970:CDS 55.0%
CCTCGAGATCTTGTGGAGGA+GGG - chr8_1:71799296-71799315 None:intergenic 55.0%
TCCTCGAGATCTTGTGGAGG+AGG - chr8_1:71799297-71799316 None:intergenic 55.0%
CCCTCCTCCACAAGATCTCG+AGG + chr8_1:71799293-71799312 Msa1211970:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 71796743 71799494 71796743 ID=Msa1211970;Name=Msa1211970
chr8_1 mRNA 71796743 71799494 71796743 ID=Msa1211970-mRNA-1;Parent=Msa1211970;Name=Msa1211970-mRNA-1;_AED=0.08;_eAED=0.09;_QI=0|0|0|1|1|1|8|0|333
chr8_1 exon 71796743 71796927 71796743 ID=Msa1211970-mRNA-1:exon:24170;Parent=Msa1211970-mRNA-1
chr8_1 exon 71797292 71797351 71797292 ID=Msa1211970-mRNA-1:exon:24171;Parent=Msa1211970-mRNA-1
chr8_1 exon 71797436 71797454 71797436 ID=Msa1211970-mRNA-1:exon:24172;Parent=Msa1211970-mRNA-1
chr8_1 exon 71797573 71797637 71797573 ID=Msa1211970-mRNA-1:exon:24173;Parent=Msa1211970-mRNA-1
chr8_1 exon 71798386 71798482 71798386 ID=Msa1211970-mRNA-1:exon:24174;Parent=Msa1211970-mRNA-1
chr8_1 exon 71798611 71798658 71798611 ID=Msa1211970-mRNA-1:exon:24175;Parent=Msa1211970-mRNA-1
chr8_1 exon 71798743 71798870 71798743 ID=Msa1211970-mRNA-1:exon:24176;Parent=Msa1211970-mRNA-1
chr8_1 exon 71799095 71799494 71799095 ID=Msa1211970-mRNA-1:exon:24177;Parent=Msa1211970-mRNA-1
chr8_1 CDS 71796743 71796927 71796743 ID=Msa1211970-mRNA-1:cds;Parent=Msa1211970-mRNA-1
chr8_1 CDS 71797292 71797351 71797292 ID=Msa1211970-mRNA-1:cds;Parent=Msa1211970-mRNA-1
chr8_1 CDS 71797436 71797454 71797436 ID=Msa1211970-mRNA-1:cds;Parent=Msa1211970-mRNA-1
chr8_1 CDS 71797573 71797637 71797573 ID=Msa1211970-mRNA-1:cds;Parent=Msa1211970-mRNA-1
chr8_1 CDS 71798386 71798482 71798386 ID=Msa1211970-mRNA-1:cds;Parent=Msa1211970-mRNA-1
chr8_1 CDS 71798611 71798658 71798611 ID=Msa1211970-mRNA-1:cds;Parent=Msa1211970-mRNA-1
chr8_1 CDS 71798743 71798870 71798743 ID=Msa1211970-mRNA-1:cds;Parent=Msa1211970-mRNA-1
chr8_1 CDS 71799095 71799494 71799095 ID=Msa1211970-mRNA-1:cds;Parent=Msa1211970-mRNA-1
Gene Sequence

>Msa1211970

ATGGGGAGAGTTAAATTGAAGATAAAGAAATTGGAGAGCACAAGCAACCGACATGTGACTTATTCGAAGCGGAAAAGTGGGATCTTGAAGAAAGCAAAAGAGTTATCAATTCTATGTGATATAGATATTCTCCTTCTCATGTTTTCTCCAACAGGAAAGCCTACGTTATTACAGGGAGAACGAAGCAATATGGAGGAGATCATTGCAAAATTTGCCCAACTTAGTCCACAAGAAAGGGCTAAAAGGAAAATGGAAAGTCTTGAAGCACTGAAAAAAACCTTCAAGAAATTGGATCATGATGTAAAGATACAAGATTTCCTGGGTTCAAGTTATTGGAGTAATCTGGAGAAGATCAATAACTTGGAACATCTTAGACAAATGGAAGACTCACTCAGGGAATCAATCAATCGATTGTCTATACAAAAGGAAAATCTCGAAAAGCACCAACTAATGTCACTTGAATGCGTTAACCAGTTACCAGAAGGGATGACTTTACCCTTAATGATGTCTGGTCTACAAGAATCTCAACCTTTGTCTTGGCTTCTAAGTGGTGATAATCACCAGTTGATGTTACCTAGTGAACCAAAGTTTATGTCATTCAGTGACAATGGCAATAGAGATGTTGAGTGCTCAACCAACATTTCACTCCCAAGCTATTCTGGTTATACTGGGAACTGCAAACTGGAGGTGGGAAGCTCTCCACATGTCACTACTTTGGGTCAGGGTGGTGGTACCTTGAATGAGTTAAATGGAAATCCAAATCCTTACTTAAATGTGCAACAGTGTCAGCAGTTTGCATACCCTCCTCCACAAGATCTCGAGGAAGTGAAACATCACCAACCAATCAATATCAAATCAAATAACGTGGACTACCAAGTTAATAACAATTATGATCTGCCAAAATCACTATTTGAAAATGGACACCAGTTCTGGAATTCTACAAATGACTCTTGTGGTATTGCTATGTATAACGAGAATGGTTTCCATAGGGTAAGCATGTAG
Protein sequence

>Msa1211970

MGRVKLKIKKLESTSNRHVTYSKRKSGILKKAKELSILCDIDILLLMFSPTGKPTLLQGERSNMEEIIAKFAQLSPQERAKRKMESLEALKKTFKKLDHDVKIQDFLGSSYWSNLEKINNLEHLRQMEDSLRESINRLSIQKENLEKHQLMSLECVNQLPEGMTLPLMMSGLQESQPLSWLLSGDNHQLMLPSEPKFMSFSDNGNRDVECSTNISLPSYSGYTGNCKLEVGSSPHVTTLGQGGGTLNELNGNPNPYLNVQQCQQFAYPPPQDLEEVKHHQPINIKSNNVDYQVNNNYDLPKSLFENGHQFWNSTNDSCGIAMYNENGFHRVSM*