Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1214150 | XP_003609137.1 | 98.065 | 155 | 1 | 1 | 1 | 155 | 1 | 153 | 2.10e-107 | 313 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1214150 | sp|P49592|NC2B_ARATH | 82.051 | 156 | 24 | 2 | 1 | 154 | 1 | 154 | 3.41e-90 | 262 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa1214150 | TF | NF-YB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1214150 | MtrunA17_Chr4g0062271 | 98.065 | 155 | 1 | 1 | 1 | 155 | 1 | 153 | 1.93e-111 | 313 |
| Msa1214150 | MtrunA17_Chr2g0307551 | 83.871 | 155 | 23 | 1 | 1 | 155 | 1 | 153 | 1.46e-95 | 273 |
| Msa1214150 | MtrunA17_Chr1g0185911 | 40.230 | 87 | 48 | 2 | 12 | 96 | 30 | 114 | 1.07e-15 | 70.5 |
| Msa1214150 | MtrunA17_Chr3g0102351 | 36.250 | 80 | 49 | 1 | 12 | 91 | 28 | 105 | 4.04e-14 | 66.6 |
| Msa1214150 | MtrunA17_Chr7g0263601 | 36.585 | 82 | 50 | 1 | 12 | 93 | 27 | 106 | 4.57e-14 | 65.9 |
| Msa1214150 | MtrunA17_Chr5g0446491 | 35.366 | 82 | 51 | 1 | 12 | 93 | 24 | 103 | 5.77e-14 | 65.9 |
| Msa1214150 | MtrunA17_Chr4g0076381 | 37.037 | 81 | 49 | 1 | 11 | 91 | 58 | 136 | 6.02e-14 | 67.0 |
| Msa1214150 | MtrunA17_Chr1g0165041 | 28.125 | 96 | 67 | 1 | 6 | 101 | 1 | 94 | 2.30e-13 | 64.3 |
| Msa1214150 | MtrunA17_Chr2g0296321 | 30.357 | 112 | 70 | 2 | 8 | 113 | 63 | 172 | 5.75e-13 | 64.3 |
| Msa1214150 | MtrunA17_Chr2g0290491 | 31.765 | 85 | 56 | 1 | 7 | 91 | 13 | 95 | 1.49e-12 | 62.0 |
| Msa1214150 | MtrunA17_Chr4g0067091 | 33.333 | 81 | 52 | 1 | 11 | 91 | 22 | 100 | 2.07e-12 | 62.4 |
| Msa1214150 | MtrunA17_Chr8g0384451 | 28.889 | 90 | 62 | 1 | 12 | 101 | 41 | 128 | 2.86e-12 | 62.0 |
| Msa1214150 | MtrunA17_Chr8g0382931 | 31.395 | 86 | 57 | 1 | 5 | 90 | 22 | 105 | 5.80e-12 | 60.8 |
| Msa1214150 | MtrunA17_Chr1g0195851 | 31.250 | 80 | 53 | 1 | 12 | 91 | 37 | 114 | 1.35e-11 | 59.7 |
| Msa1214150 | MtrunA17_Chr4g0076321 | 34.211 | 76 | 48 | 1 | 16 | 91 | 24 | 97 | 2.91e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1214150 | AT5G23090.5 | 82.051 | 156 | 24 | 2 | 1 | 154 | 1 | 154 | 3.46e-91 | 262 |
| Msa1214150 | AT5G23090.2 | 82.051 | 156 | 24 | 2 | 1 | 154 | 1 | 154 | 3.46e-91 | 262 |
| Msa1214150 | AT5G23090.1 | 82.051 | 156 | 24 | 2 | 1 | 154 | 1 | 154 | 3.46e-91 | 262 |
| Msa1214150 | AT5G23090.4 | 81.410 | 156 | 24 | 3 | 1 | 154 | 1 | 153 | 1.28e-88 | 255 |
| Msa1214150 | AT5G08190.1 | 86.713 | 143 | 17 | 1 | 1 | 143 | 1 | 141 | 1.63e-81 | 238 |
| Msa1214150 | AT5G08190.2 | 86.014 | 143 | 17 | 2 | 1 | 143 | 1 | 140 | 6.53e-79 | 231 |
| Msa1214150 | AT5G23090.3 | 74.359 | 156 | 23 | 3 | 1 | 154 | 1 | 141 | 1.61e-78 | 229 |
| Msa1214150 | AT2G38880.7 | 30.476 | 105 | 71 | 1 | 12 | 116 | 22 | 124 | 4.61e-15 | 68.2 |
| Msa1214150 | AT2G38880.3 | 31.776 | 107 | 69 | 2 | 12 | 116 | 22 | 126 | 1.36e-14 | 67.0 |
| Msa1214150 | AT2G38880.11 | 33.684 | 95 | 59 | 2 | 12 | 104 | 22 | 114 | 1.40e-14 | 67.4 |
| Msa1214150 | AT2G38880.8 | 33.684 | 95 | 59 | 2 | 12 | 104 | 22 | 114 | 1.40e-14 | 67.4 |
| Msa1214150 | AT2G38880.2 | 31.776 | 107 | 69 | 2 | 12 | 116 | 22 | 126 | 1.58e-14 | 66.6 |
| Msa1214150 | AT2G38880.1 | 31.776 | 107 | 69 | 2 | 12 | 116 | 22 | 126 | 1.58e-14 | 66.6 |
| Msa1214150 | AT2G38880.5 | 31.776 | 107 | 69 | 2 | 12 | 116 | 22 | 126 | 1.58e-14 | 66.6 |
| Msa1214150 | AT4G14540.1 | 30.392 | 102 | 69 | 1 | 12 | 113 | 22 | 121 | 1.63e-14 | 67.4 |
| Msa1214150 | AT3G53340.5 | 34.314 | 102 | 64 | 2 | 12 | 113 | 30 | 128 | 4.09e-14 | 66.6 |
| Msa1214150 | AT3G53340.1 | 34.314 | 102 | 64 | 2 | 12 | 113 | 30 | 128 | 4.09e-14 | 66.6 |
| Msa1214150 | AT5G47640.1 | 30.088 | 113 | 76 | 2 | 12 | 124 | 28 | 137 | 5.29e-14 | 66.6 |
| Msa1214150 | AT2G37060.2 | 35.366 | 82 | 51 | 1 | 12 | 93 | 31 | 110 | 5.47e-14 | 66.2 |
| Msa1214150 | AT2G37060.3 | 35.366 | 82 | 51 | 1 | 12 | 93 | 31 | 110 | 5.47e-14 | 66.2 |
| Msa1214150 | AT2G37060.1 | 35.366 | 82 | 51 | 1 | 12 | 93 | 31 | 110 | 5.47e-14 | 66.2 |
| Msa1214150 | AT2G38880.4 | 34.483 | 87 | 53 | 2 | 12 | 96 | 22 | 106 | 6.35e-14 | 64.3 |
| Msa1214150 | AT5G47670.2 | 37.037 | 81 | 49 | 1 | 11 | 91 | 29 | 107 | 8.30e-14 | 66.2 |
| Msa1214150 | AT5G47670.1 | 36.145 | 83 | 51 | 1 | 11 | 93 | 58 | 138 | 1.16e-13 | 66.2 |
| Msa1214150 | AT5G47670.3 | 36.145 | 83 | 51 | 1 | 11 | 93 | 58 | 138 | 1.16e-13 | 66.2 |
| Msa1214150 | AT3G53340.4 | 36.250 | 80 | 49 | 1 | 12 | 91 | 30 | 107 | 5.23e-13 | 62.4 |
| Msa1214150 | AT2G38880.9 | 30.612 | 98 | 66 | 1 | 12 | 109 | 22 | 117 | 1.18e-12 | 62.0 |
| Msa1214150 | AT2G38880.10 | 30.612 | 98 | 66 | 1 | 12 | 109 | 22 | 117 | 1.18e-12 | 62.0 |
| Msa1214150 | AT2G38880.6 | 30.612 | 98 | 66 | 1 | 12 | 109 | 22 | 117 | 1.18e-12 | 62.0 |
| Msa1214150 | AT3G53340.3 | 32.222 | 90 | 59 | 1 | 12 | 101 | 30 | 117 | 1.31e-12 | 62.0 |
| Msa1214150 | AT3G53340.2 | 32.222 | 90 | 59 | 1 | 12 | 101 | 30 | 117 | 1.31e-12 | 62.0 |
| Msa1214150 | AT1G21970.1 | 31.325 | 83 | 55 | 1 | 11 | 93 | 59 | 139 | 2.11e-12 | 63.2 |
| Msa1214150 | AT2G13570.1 | 31.646 | 79 | 52 | 1 | 12 | 90 | 37 | 113 | 3.32e-11 | 59.3 |
| Msa1214150 | AT1G09030.1 | 29.268 | 82 | 56 | 1 | 12 | 93 | 4 | 83 | 4.89e-11 | 57.8 |
Find 76 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTAGCTAATCTAATTT+TGG | 0.141370 | 8_1:+74640922 | None:intergenic |
| TGGTCACCATCTGGCTGTTT+TGG | 0.240495 | 8_1:+74640942 | None:intergenic |
| TGGTTTATTCACTTACTTAC+AGG | 0.241229 | 8_1:+74644469 | None:intergenic |
| ATACTTTAAAAGCTGGTAAA+TGG | 0.274950 | 8_1:-74641061 | Msa1214150:CDS |
| AGTAAGTGGAAAACGCGTTT+TGG | 0.275923 | 8_1:-74644557 | None:intergenic |
| TGGGTTGATATATAAATTTA+TGG | 0.301770 | 8_1:+74644432 | None:intergenic |
| CGCTCGCTCGCAACAAGAAT+TGG | 0.318059 | 8_1:-74644502 | Msa1214150:five_prime_UTR |
| AGGACCGACCTCTGCTATAT+TGG | 0.324322 | 8_1:-74640901 | Msa1214150:three_prime_UTR |
| TTTCCCCAGGTGCTTGGATT+TGG | 0.324476 | 8_1:-74641829 | Msa1214150:intron |
| GGTGAAGACATGGTTGGGTT+GGG | 0.381862 | 8_1:+74644413 | None:intergenic |
| GAGCGAGCGAGCATACGCTT+AGG | 0.402192 | 8_1:+74644520 | None:intergenic |
| CAGCAAGATACTTTAAAAGC+TGG | 0.415421 | 8_1:-74641068 | Msa1214150:CDS |
| TGCGCCTGAGCACGTATTGA+AGG | 0.421286 | 8_1:-74642601 | Msa1214150:CDS |
| AGCACTCGATCAATAGATCT+TGG | 0.421579 | 8_1:+74643375 | None:intergenic |
| CTCTCTGCTACATACTTCAT+TGG | 0.429101 | 8_1:+74642638 | None:intergenic |
| TAAATTTATGGAGAAGAGAA+TGG | 0.429357 | 8_1:+74644444 | None:intergenic |
| CAATTCTTCTTCAGTTCAAT+CGG | 0.432071 | 8_1:-74644349 | Msa1214150:intron |
| TATGTAGCAGAGAGGACAAA+AGG | 0.468267 | 8_1:-74642629 | Msa1214150:CDS |
| TTATGGAGAAGAGAATGGTT+TGG | 0.473705 | 8_1:+74644449 | None:intergenic |
| GGGTGAAGACATGGTTGGGT+TGG | 0.476941 | 8_1:+74644412 | None:intergenic |
| GAAGCACGGACAGGAGTAAG+AGG | 0.478497 | 8_1:+74640861 | None:intergenic |
| GCACGTATTGAAGGCTCTAC+AGG | 0.479345 | 8_1:-74642592 | Msa1214150:intron |
| ATGAATGTAACAGAAATAAA+CGG | 0.481772 | 8_1:+74640624 | None:intergenic |
| AAAATTATTCACTAGTTCGC+TGG | 0.489203 | 8_1:-74640817 | Msa1214150:three_prime_UTR |
| CGATTTGCCAACGATATCCA+TGG | 0.490386 | 8_1:+74644226 | None:intergenic |
| GGTGAAGGAGGAGGCGCAGA+GGG | 0.490980 | 8_1:+74644392 | None:intergenic |
| GAGGCCCGCGCTAGGATGAA+TGG | 0.491671 | 8_1:-74640978 | Msa1214150:CDS |
| CAGAGGGTGAAGACATGGTT+GGG | 0.495823 | 8_1:+74644408 | None:intergenic |
| CCCGCGCTAGGATGAATGGT+GGG | 0.499784 | 8_1:-74640974 | Msa1214150:CDS |
| CAAAATTAGATTAGCTAGGA+AGG | 0.514662 | 8_1:-74640921 | Msa1214150:exon |
| GCACTCGATCAATAGATCTT+GGG | 0.526789 | 8_1:+74643376 | None:intergenic |
| AGGTTAAATTATGGATCCCA+TGG | 0.527047 | 8_1:-74644243 | Msa1214150:exon |
| CCCACCATTCATCCTAGCGC+GGG | 0.529331 | 8_1:+74640974 | None:intergenic |
| AGAGCCTTCAATACGTGCTC+AGG | 0.530619 | 8_1:+74642597 | None:intergenic |
| AGCTCACAGGAAGCACGGAC+AGG | 0.544447 | 8_1:+74640852 | None:intergenic |
| GACGAAGACGGTGAAGGAGG+AGG | 0.547112 | 8_1:+74644383 | None:intergenic |
| CGTGAAGACGAAGACGGTGA+AGG | 0.559050 | 8_1:+74644377 | None:intergenic |
| GGTTTATTCACTTACTTACA+GGG | 0.564413 | 8_1:+74644470 | None:intergenic |
| CTATTGATCGAGTGCTGTGT+AGG | 0.564923 | 8_1:-74643368 | Msa1214150:intron |
| CCCCACCATTCATCCTAGCG+CGG | 0.565574 | 8_1:+74640973 | None:intergenic |
| GCAGAGGGTGAAGACATGGT+TGG | 0.576788 | 8_1:+74644407 | None:intergenic |
| CACTAGTTCGCTGGCCAATG+TGG | 0.578767 | 8_1:-74640808 | Msa1214150:three_prime_UTR |
| AAAGCTGGTAAATGGAGCAA+TGG | 0.581041 | 8_1:-74641053 | Msa1214150:CDS |
| TAGTGTGTAGAAGATCCAAA+AGG | 0.583993 | 8_1:+74640696 | None:intergenic |
| AGCATACGAACAACACAAGC+TGG | 0.587192 | 8_1:-74641782 | Msa1214150:CDS |
| AGGCGCAGAGGGTGAAGACA+TGG | 0.589515 | 8_1:+74644403 | None:intergenic |
| CGGTGAAGGAGGAGGCGCAG+AGG | 0.590540 | 8_1:+74644391 | None:intergenic |
| GTTTATAAATCTCATCTCAT+CGG | 0.592523 | 8_1:-74642664 | Msa1214150:CDS |
| ATGGATCCCATGGATATCGT+TGG | 0.592534 | 8_1:-74644233 | Msa1214150:CDS |
| GCTATATTGGAGCACATAGG+AGG | 0.600323 | 8_1:-74640888 | Msa1214150:three_prime_UTR |
| AATTGAGCTCACAGGAAGCA+CGG | 0.602703 | 8_1:+74640847 | None:intergenic |
| TGACCAAAATTAGATTAGCT+AGG | 0.603970 | 8_1:-74640925 | Msa1214150:exon |
| ATGTGATTCTAAACAGAAGA+GGG | 0.604038 | 8_1:+74640735 | None:intergenic |
| GGATATCGTTGGCAAATCGA+AGG | 0.607995 | 8_1:-74644222 | Msa1214150:CDS |
| GATTTGCCAACGATATCCAT+GGG | 0.608748 | 8_1:+74644227 | None:intergenic |
| TTGTACACAATTGAGCTCAC+AGG | 0.609129 | 8_1:+74640839 | None:intergenic |
| AATTCATCGATAAAATACAA+TGG | 0.623929 | 8_1:+74640776 | None:intergenic |
| GAAGACGAAGACGGTGAAGG+AGG | 0.625107 | 8_1:+74644380 | None:intergenic |
| AATGGAGAGCACATCCACAT+TGG | 0.629798 | 8_1:+74640794 | None:intergenic |
| AAGCATTAGCAGAACAACAA+AGG | 0.632993 | 8_1:-74641010 | Msa1214150:CDS |
| TGCTCCAATATAGCAGAGGT+CGG | 0.635764 | 8_1:+74640897 | None:intergenic |
| GCCCGCGCTAGGATGAATGG+TGG | 0.635837 | 8_1:-74640975 | Msa1214150:CDS |
| ACAACACAAGCTGGAGACCA+TGG | 0.639569 | 8_1:-74641773 | Msa1214150:intron |
| CATGTGATTCTAAACAGAAG+AGG | 0.642354 | 8_1:+74640734 | None:intergenic |
| CAATATCAGAAATATTAATG+TGG | 0.647267 | 8_1:-74640601 | Msa1214150:three_prime_UTR |
| GAAGATGCTTCGCTTCCCAA+AGG | 0.654221 | 8_1:-74644200 | Msa1214150:intron |
| AACAGAAATAAACGGAACGA+TGG | 0.659340 | 8_1:+74640632 | None:intergenic |
| ATTGCTCCAAAACAGCCAGA+TGG | 0.666319 | 8_1:-74640948 | Msa1214150:CDS |
| CCGCGCTAGGATGAATGGTG+GGG | 0.672298 | 8_1:-74640973 | Msa1214150:CDS |
| GAGATGCGTGAAGACGAAGA+CGG | 0.673292 | 8_1:+74644371 | None:intergenic |
| TATGTGCTCCAATATAGCAG+AGG | 0.684635 | 8_1:+74640893 | None:intergenic |
| ACAACAAAGGATGTTTGCAG+AGG | 0.686768 | 8_1:-74640997 | Msa1214150:CDS |
| TCTGCTATATTGGAGCACAT+AGG | 0.687889 | 8_1:-74640891 | Msa1214150:three_prime_UTR |
| CTTGGGTGTCTCTCGCCACG+CGG | 0.690389 | 8_1:+74643393 | None:intergenic |
| CAATGAAGTATGTAGCAGAG+AGG | 0.698906 | 8_1:-74642637 | Msa1214150:CDS |
| CAATGGAGCTGAGATGACTG+AGG | 0.705174 | 8_1:-74641036 | Msa1214150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTATTATTTTTTTT+AGG | - | chr8_1:74640855-74640874 | Msa1214150:three_prime_UTR | 0.0% |
| !! | AAAAAAAAAAAAAAAAAAAA+CGG | + | chr8_1:74641173-74641192 | None:intergenic | 0.0% |
| !!! | ATTTTTTTTAGGTTAAATTA+TGG | - | chr8_1:74640866-74640885 | Msa1214150:three_prime_UTR | 10.0% |
| !!! | ATTACTAATATTTGTTTTAT+CGG | - | chr8_1:74640956-74640975 | Msa1214150:CDS | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGAAC+AGG | - | chr8_1:74641177-74641196 | Msa1214150:intron | 10.0% |
| !! | TTTATAATGATAATTAATAG+TGG | - | chr8_1:74641557-74641576 | Msa1214150:intron | 10.0% |
| !!! | ATGTTTTTTTATTTTTTTTG+AGG | - | chr8_1:74642020-74642039 | Msa1214150:intron | 10.0% |
| !!! | TGTTTTTTTATTTTTTTTGA+GGG | - | chr8_1:74642021-74642040 | Msa1214150:intron | 10.0% |
| !! | TTAACTAAAAAAAAAACTAT+GGG | + | chr8_1:74643008-74643027 | None:intergenic | 10.0% |
| !!! | ATTTATTTCAATTCTAAAAT+CGG | - | chr8_1:74643163-74643182 | Msa1214150:intron | 10.0% |
| !! | AACAATGACAAAAATAATTA+AGG | - | chr8_1:74641683-74641702 | Msa1214150:intron | 15.0% |
| !!! | GAGTTTATTATTTTATTTCA+GGG | - | chr8_1:74641828-74641847 | Msa1214150:intron | 15.0% |
| !!! | AACATTTTAATTATAATCCA+TGG | + | chr8_1:74641978-74641997 | None:intergenic | 15.0% |
| !!! | GTTTTTTTATTTTTTTTGAG+GGG | - | chr8_1:74642022-74642041 | Msa1214150:intron | 15.0% |
| !! | GCAAATTTATATAATCTTAT+GGG | + | chr8_1:74642239-74642258 | None:intergenic | 15.0% |
| !! | CTAAGATTATCAAAAATAAA+TGG | + | chr8_1:74642385-74642404 | None:intergenic | 15.0% |
| !! | ATTAAATTTGACTATTCAAA+TGG | - | chr8_1:74642611-74642630 | Msa1214150:CDS | 15.0% |
| !! | TTAAATTTGACTATTCAAAT+GGG | - | chr8_1:74642612-74642631 | Msa1214150:CDS | 15.0% |
| !! | AATAGATCTTTAATCAATAA+AGG | + | chr8_1:74642883-74642902 | None:intergenic | 15.0% |
| !! | CTTAACTAAAAAAAAAACTA+TGG | + | chr8_1:74643009-74643028 | None:intergenic | 15.0% |
| !!! | TAAATTTGTTTTGAATGAAA+TGG | + | chr8_1:74643148-74643167 | None:intergenic | 15.0% |
| !!! | TTTTACACTATTTTTTGTTT+TGG | + | chr8_1:74643475-74643494 | None:intergenic | 15.0% |
| !! | TTTAAAAACACAAACTAAAA+TGG | + | chr8_1:74643542-74643561 | None:intergenic | 15.0% |
| !!! | TTTAGTTTGTGTTTTTAAAT+CGG | - | chr8_1:74643543-74643562 | Msa1214150:intron | 15.0% |
| !!! | TAATTATTTTATTTGCCTTT+TGG | - | chr8_1:74644407-74644426 | Msa1214150:five_prime_UTR | 15.0% |
| !!! | TGGGTTGATATATAAATTTA+TGG | + | chr8_1:74640689-74640708 | None:intergenic | 20.0% |
| !! | ATATGCAATGTCTTTATAAT+TGG | - | chr8_1:74641084-74641103 | Msa1214150:intron | 20.0% |
| !! | ACAAATATTATATACTCTGA+TGG | + | chr8_1:74641276-74641295 | None:intergenic | 20.0% |
| !!! | CAATGGACAATTTTTTAAAT+GGG | - | chr8_1:74641523-74641542 | Msa1214150:intron | 20.0% |
| !!! | CTCTATTTTATTTGTTTCTA+GGG | - | chr8_1:74641616-74641635 | Msa1214150:intron | 20.0% |
| !!! | CGAGTTTATTATTTTATTTC+AGG | - | chr8_1:74641827-74641846 | Msa1214150:intron | 20.0% |
| !!! | TGAGTTTCTTCTTTTATTTT+AGG | - | chr8_1:74641871-74641890 | Msa1214150:intron | 20.0% |
| !!! | GAGTTTCTTCTTTTATTTTA+GGG | - | chr8_1:74641872-74641891 | Msa1214150:intron | 20.0% |
| !! | AATAATAACCAAATATCACT+AGG | + | chr8_1:74642068-74642087 | None:intergenic | 20.0% |
| !! | TTAATTTAGATTCAAATCTG+AGG | - | chr8_1:74642135-74642154 | Msa1214150:intron | 20.0% |
| !! | TACTATATGACTGTATATTA+TGG | + | chr8_1:74642203-74642222 | None:intergenic | 20.0% |
| !! | GGCAAATTTATATAATCTTA+TGG | + | chr8_1:74642240-74642259 | None:intergenic | 20.0% |
| !! | AGACAGACATAAAATAAAAA+TGG | + | chr8_1:74642321-74642340 | None:intergenic | 20.0% |
| !!! | TGTCTGTCTAAATTTTTTTT+AGG | - | chr8_1:74642332-74642351 | Msa1214150:intron | 20.0% |
| !!! | AAATTTTTTTTAGGCTGTTT+AGG | - | chr8_1:74642341-74642360 | Msa1214150:intron | 20.0% |
| !! | AAAGTGAAATGAAATAAATG+TGG | + | chr8_1:74642790-74642809 | None:intergenic | 20.0% |
| !!! | GTATTGAGTAGTTAAATTTT+AGG | + | chr8_1:74642847-74642866 | None:intergenic | 20.0% |
| !! | ATTCATAATCAAAATTACCA+TGG | + | chr8_1:74643365-74643384 | None:intergenic | 20.0% |
| !!! | CAAGTATTCATACATTTTAA+AGG | + | chr8_1:74643449-74643468 | None:intergenic | 20.0% |
| !!! | TTAGTTTGTGTTTTTAAATC+GGG | - | chr8_1:74643544-74643563 | Msa1214150:intron | 20.0% |
| !! | ATAACTACTAAGAAATATGT+AGG | + | chr8_1:74643718-74643737 | None:intergenic | 20.0% |
| !! | AAAAGTAAAATCATATGCAA+TGG | + | chr8_1:74643987-74644006 | None:intergenic | 20.0% |
| !! | AATTCATCGATAAAATACAA+TGG | + | chr8_1:74644345-74644364 | None:intergenic | 20.0% |
| !! | ATGAATGTAACAGAAATAAA+CGG | + | chr8_1:74644497-74644516 | None:intergenic | 20.0% |
| !! | CAATATCAGAAATATTAATG+TGG | - | chr8_1:74644517-74644536 | Msa1214150:five_prime_UTR | 20.0% |
| ! | TAAATTTATGGAGAAGAGAA+TGG | + | chr8_1:74640677-74640696 | None:intergenic | 25.0% |
| ! | AATTGGAATCAATTCGTTAT+CGG | - | chr8_1:74641017-74641036 | Msa1214150:CDS | 25.0% |
| ! | AAATTGGATGAGGTTATAAT+TGG | - | chr8_1:74641052-74641071 | Msa1214150:CDS | 25.0% |
| ! | AACTCATATTCAGAATCTTA+AGG | + | chr8_1:74641122-74641141 | None:intergenic | 25.0% |
| !! | CAAAGAGTGCAATTTAAAAA+CGG | + | chr8_1:74641212-74641231 | None:intergenic | 25.0% |
| ! | AAACAGAAAAACATTAAGCT+GGG | + | chr8_1:74641414-74641433 | None:intergenic | 25.0% |
| !! | TTAATGTTTTTCTGTTTGCA+AGG | - | chr8_1:74641417-74641436 | Msa1214150:intron | 25.0% |
| !! | TACTACTGTTTTGTGAAAAT+TGG | - | chr8_1:74641468-74641487 | Msa1214150:intron | 25.0% |
| ! | TTTATATAACAGTTGTCGAA+AGG | - | chr8_1:74641497-74641516 | Msa1214150:intron | 25.0% |
| ! | CCATTTAAAAAATTGTCCAT+TGG | + | chr8_1:74641525-74641544 | None:intergenic | 25.0% |
| !!! | CCAATGGACAATTTTTTAAA+TGG | - | chr8_1:74641522-74641541 | Msa1214150:intron | 25.0% |
| !! | ATATGATTTTCCTCAAGTTT+TGG | - | chr8_1:74641581-74641600 | Msa1214150:intron | 25.0% |
| !!! | GCTCTATTTTATTTGTTTCT+AGG | - | chr8_1:74641615-74641634 | Msa1214150:intron | 25.0% |
| !!! | TTTTTTGAGGGGAATTAAAA+TGG | - | chr8_1:74642033-74642052 | Msa1214150:intron | 25.0% |
| ! | CTGTATATTATGGTGATTTA+TGG | + | chr8_1:74642193-74642212 | None:intergenic | 25.0% |
| ! | ATACAGTCATATAGTATCTT+TGG | - | chr8_1:74642207-74642226 | Msa1214150:intron | 25.0% |
| ! | TAATCGATCTAAAAACAAGA+CGG | + | chr8_1:74642261-74642280 | None:intergenic | 25.0% |
| !! | GTTACTGAATAAGATTTTGT+TGG | - | chr8_1:74642414-74642433 | Msa1214150:intron | 25.0% |
| ! | GTTTATAAATCTCATCTCAT+CGG | - | chr8_1:74642454-74642473 | Msa1214150:intron | 25.0% |
| !!! | AGTAGTTAAATTTTAGGTGT+TGG | + | chr8_1:74642841-74642860 | None:intergenic | 25.0% |
| ! | GATCTTTAATCAATAAAGGA+TGG | + | chr8_1:74642879-74642898 | None:intergenic | 25.0% |
| ! | CAGAGATAAATATGTATGTA+AGG | + | chr8_1:74643102-74643121 | None:intergenic | 25.0% |
| ! | TCAATAAACGAAATCATATC+AGG | + | chr8_1:74643260-74643279 | None:intergenic | 25.0% |
| ! | TCAAGTATTCAGCATAAATA+CGG | + | chr8_1:74643391-74643410 | None:intergenic | 25.0% |
| !!! | CTCTACACTAACTTTTATTT+GGG | + | chr8_1:74643503-74643522 | None:intergenic | 25.0% |
| !! | ACTCTACACTAACTTTTATT+TGG | + | chr8_1:74643504-74643523 | None:intergenic | 25.0% |
| !!! | TAGTTTGTGTTTTTAAATCG+GGG | - | chr8_1:74643545-74643564 | Msa1214150:intron | 25.0% |
| ! | TATGTAGTGTTTATTGATCT+GGG | - | chr8_1:74643945-74643964 | Msa1214150:intron | 25.0% |
| !! | ATACTTTAAAAGCTGGTAAA+TGG | - | chr8_1:74644057-74644076 | Msa1214150:intron | 25.0% |
| GGTTTATTCACTTACTTACA+GGG | + | chr8_1:74640651-74640670 | None:intergenic | 30.0% | |
| TGGTTTATTCACTTACTTAC+AGG | + | chr8_1:74640652-74640671 | None:intergenic | 30.0% | |
| CAATTCTTCTTCAGTTCAAT+CGG | - | chr8_1:74640769-74640788 | Msa1214150:three_prime_UTR | 30.0% | |
| AAATTGCAGATCTGAAAAGA+AGG | + | chr8_1:74640812-74640831 | None:intergenic | 30.0% | |
| TTGATCTGTTAAATTGGATG+AGG | - | chr8_1:74641042-74641061 | Msa1214150:CDS | 30.0% | |
| ! | TAGATGTTTTACTTAGCTTC+AGG | - | chr8_1:74641307-74641326 | Msa1214150:intron | 30.0% |
| CAAACAGAAAAACATTAAGC+TGG | + | chr8_1:74641415-74641434 | None:intergenic | 30.0% | |
| ! | AACAAATAAAATAGAGCGCT+TGG | + | chr8_1:74641612-74641631 | None:intergenic | 30.0% |
| !!! | TTTTATTTGTTTCTAGGGCA+TGG | - | chr8_1:74641621-74641640 | Msa1214150:intron | 30.0% |
| !!! | ATGTCGACAAATTTTTTCCA+TGG | - | chr8_1:74641958-74641977 | Msa1214150:intron | 30.0% |
| ! | ACGATCAGTATATCTTTTCA+GGG | - | chr8_1:74642112-74642131 | Msa1214150:intron | 30.0% |
| TCATATGGTATGTTATGGTT+GGG | + | chr8_1:74642169-74642188 | None:intergenic | 30.0% | |
| ATCATATGGTATGTTATGGT+TGG | + | chr8_1:74642170-74642189 | None:intergenic | 30.0% | |
| ATGGATCATATGGTATGTTA+TGG | + | chr8_1:74642174-74642193 | None:intergenic | 30.0% | |
| ATGGTGATTTATGGATCATA+TGG | + | chr8_1:74642184-74642203 | None:intergenic | 30.0% | |
| TATCGCCAAAGATATTACTA+TGG | + | chr8_1:74642290-74642309 | None:intergenic | 30.0% | |
| TGTTTAGGCTTACTAGATTA+CGG | - | chr8_1:74642356-74642375 | Msa1214150:intron | 30.0% | |
| AATAACAGATAAGAACCAGA+TGG | + | chr8_1:74642588-74642607 | None:intergenic | 30.0% | |
| CATTGTATCATTAAGAACCT+TGG | + | chr8_1:74642668-74642687 | None:intergenic | 30.0% | |
| ATGTAAACAAGCTATGCTTT+AGG | - | chr8_1:74642685-74642704 | Msa1214150:intron | 30.0% | |
| !!! | GGTTTCAATTTTGACTATGA+AGG | + | chr8_1:74642769-74642788 | None:intergenic | 30.0% |
| !!! | ATTTTAGGTGTTGGAATGTT+TGG | + | chr8_1:74642832-74642851 | None:intergenic | 30.0% |
| ATTAATTACAACCAGTTTGC+AGG | + | chr8_1:74643056-74643075 | None:intergenic | 30.0% | |
| GATAAATATGTATGTAAGGC+AGG | + | chr8_1:74643098-74643117 | None:intergenic | 30.0% | |
| AAGTATTCAGCATAAATACG+GGG | + | chr8_1:74643389-74643408 | None:intergenic | 30.0% | |
| CAAGTATTCAGCATAAATAC+GGG | + | chr8_1:74643390-74643409 | None:intergenic | 30.0% | |
| !! | CACACCGTAAAGATTTTAAT+GGG | - | chr8_1:74643634-74643653 | Msa1214150:intron | 30.0% |
| !! | ACACCGTAAAGATTTTAATG+GGG | - | chr8_1:74643635-74643654 | Msa1214150:intron | 30.0% |
| ACACCCCATTAAAATCTTTA+CGG | + | chr8_1:74643641-74643660 | None:intergenic | 30.0% | |
| !! | AGATTTTAATGGGGTGTTTT+CGG | - | chr8_1:74643644-74643663 | Msa1214150:intron | 30.0% |
| !! | TTAATTTTAACAGACAGCAG+AGG | + | chr8_1:74643690-74643709 | None:intergenic | 30.0% |
| AGAACACCAAGCTATTTATT+GGG | + | chr8_1:74643784-74643803 | None:intergenic | 30.0% | |
| AACTCAAATAAATCCCAGAT+GGG | + | chr8_1:74643849-74643868 | None:intergenic | 30.0% | |
| CTATGTAGTGTTTATTGATC+TGG | - | chr8_1:74643944-74643963 | Msa1214150:intron | 30.0% | |
| AGTAAAATCATATGCAATGG+TGG | + | chr8_1:74643984-74644003 | None:intergenic | 30.0% | |
| ! | TGACCAAAATTAGATTAGCT+AGG | - | chr8_1:74644193-74644212 | Msa1214150:intron | 30.0% |
| ! | CTTCCTAGCTAATCTAATTT+TGG | + | chr8_1:74644199-74644218 | None:intergenic | 30.0% |
| ! | CAAAATTAGATTAGCTAGGA+AGG | - | chr8_1:74644197-74644216 | Msa1214150:intron | 30.0% |
| AAAATTATTCACTAGTTCGC+TGG | - | chr8_1:74644301-74644320 | Msa1214150:intron | 30.0% | |
| ATGTGATTCTAAACAGAAGA+GGG | + | chr8_1:74644386-74644405 | None:intergenic | 30.0% | |
| TTATGGAGAAGAGAATGGTT+TGG | + | chr8_1:74640672-74640691 | None:intergenic | 35.0% | |
| AGGTTAAATTATGGATCCCA+TGG | - | chr8_1:74640875-74640894 | Msa1214150:three_prime_UTR | 35.0% | |
| ! | ATAGTTTGTATCGTGATGCT+TGG | - | chr8_1:74640992-74641011 | Msa1214150:CDS | 35.0% |
| TATCGTGATGCTTGGAAAAT+TGG | - | chr8_1:74641000-74641019 | Msa1214150:CDS | 35.0% | |
| GTCTTTATAATTGGTGCAAC+AGG | - | chr8_1:74641093-74641112 | Msa1214150:intron | 35.0% | |
| AGATAACTAAGACATGTTGG+CGG | + | chr8_1:74641375-74641394 | None:intergenic | 35.0% | |
| TGCAGATAACTAAGACATGT+TGG | + | chr8_1:74641378-74641397 | None:intergenic | 35.0% | |
| ACATGTCTTAGTTATCTGCA+TGG | - | chr8_1:74641378-74641397 | Msa1214150:intron | 35.0% | |
| !! | TGATTTTCCTCAAGTTTTGG+TGG | - | chr8_1:74641584-74641603 | Msa1214150:intron | 35.0% |
| ! | TTTTTGTCATTGTTGCTGTC+AGG | + | chr8_1:74641677-74641696 | None:intergenic | 35.0% |
| CTATCATGTTTCAAGCAACT+AGG | + | chr8_1:74641926-74641945 | None:intergenic | 35.0% | |
| ! | CACGATCAGTATATCTTTTC+AGG | - | chr8_1:74642111-74642130 | Msa1214150:intron | 35.0% |
| !!! | TGTTTTTAGATCGATTACGC+CGG | - | chr8_1:74642264-74642283 | Msa1214150:intron | 35.0% |
| ! | ATTTTATGGTCTGGGAAACA+GGG | + | chr8_1:74642929-74642948 | None:intergenic | 35.0% |
| GCAGGAAAAGTTGAATAACA+GGG | + | chr8_1:74643038-74643057 | None:intergenic | 35.0% | |
| TGCAGGAAAAGTTGAATAAC+AGG | + | chr8_1:74643039-74643058 | None:intergenic | 35.0% | |
| ! | ATTCAACTTTTCCTGCAAAC+TGG | - | chr8_1:74643042-74643061 | Msa1214150:intron | 35.0% |
| ! | TTGATTTTCACATTTTCCCC+AGG | - | chr8_1:74643276-74643295 | Msa1214150:intron | 35.0% |
| ! | GCACACCGTAAAGATTTTAA+TGG | - | chr8_1:74643633-74643652 | Msa1214150:intron | 35.0% |
| AAACTCCCCAATAAATAGCT+TGG | - | chr8_1:74643775-74643794 | Msa1214150:intron | 35.0% | |
| GAACACCAAGCTATTTATTG+GGG | + | chr8_1:74643783-74643802 | None:intergenic | 35.0% | |
| CAGAACACCAAGCTATTTAT+TGG | + | chr8_1:74643785-74643804 | None:intergenic | 35.0% | |
| TTCTGTAGTTATGAGGAATG+AGG | - | chr8_1:74643800-74643819 | Msa1214150:intron | 35.0% | |
| GAACTCAAATAAATCCCAGA+TGG | + | chr8_1:74643850-74643869 | None:intergenic | 35.0% | |
| ! | CAGCAAGATACTTTAAAAGC+TGG | - | chr8_1:74644050-74644069 | Msa1214150:intron | 35.0% |
| AAGCATTAGCAGAACAACAA+AGG | - | chr8_1:74644108-74644127 | Msa1214150:intron | 35.0% | |
| !! | ATCTAATTTTGGTCACCATC+TGG | + | chr8_1:74644188-74644207 | None:intergenic | 35.0% |
| CATGTGATTCTAAACAGAAG+AGG | + | chr8_1:74644387-74644406 | None:intergenic | 35.0% | |
| TAGTGTGTAGAAGATCCAAA+AGG | + | chr8_1:74644425-74644444 | None:intergenic | 35.0% | |
| AACAGAAATAAACGGAACGA+TGG | + | chr8_1:74644489-74644508 | None:intergenic | 35.0% | |
| GCAGATCTGAAAAGAAGGAA+GGG | + | chr8_1:74640807-74640826 | None:intergenic | 40.0% | |
| TGCAGATCTGAAAAGAAGGA+AGG | + | chr8_1:74640808-74640827 | None:intergenic | 40.0% | |
| GATTTGCCAACGATATCCAT+GGG | + | chr8_1:74640894-74640913 | None:intergenic | 40.0% | |
| !! | TCGGCGTTGATCTGTTAAAT+TGG | - | chr8_1:74641036-74641055 | Msa1214150:CDS | 40.0% |
| GATGGATAGCTTAAGTCGTT+AGG | + | chr8_1:74641258-74641277 | None:intergenic | 40.0% | |
| GCACTCGATCAATAGATCTT+GGG | + | chr8_1:74641745-74641764 | None:intergenic | 40.0% | |
| AGCACTCGATCAATAGATCT+TGG | + | chr8_1:74641746-74641765 | None:intergenic | 40.0% | |
| GGGAATTAAAATGGTTGCTG+TGG | - | chr8_1:74642042-74642061 | Msa1214150:intron | 40.0% | |
| GCCAAAGATATTACTATGGC+CGG | + | chr8_1:74642286-74642305 | None:intergenic | 40.0% | |
| CTCTCTGCTACATACTTCAT+TGG | + | chr8_1:74642483-74642502 | None:intergenic | 40.0% | |
| CAATGAAGTATGTAGCAGAG+AGG | - | chr8_1:74642481-74642500 | Msa1214150:intron | 40.0% | |
| TATGTAGCAGAGAGGACAAA+AGG | - | chr8_1:74642489-74642508 | Msa1214150:intron | 40.0% | |
| TCAAATGGGACCATACATCT+TGG | - | chr8_1:74642626-74642645 | Msa1214150:CDS | 40.0% | |
| CAAATGGGACCATACATCTT+GGG | - | chr8_1:74642627-74642646 | Msa1214150:CDS | 40.0% | |
| ATAACAGTGCCCAAGATGTA+TGG | + | chr8_1:74642639-74642658 | None:intergenic | 40.0% | |
| ! | ATCTTGGGCACTGTTATGTT+TGG | - | chr8_1:74642642-74642661 | Msa1214150:CDS | 40.0% |
| ACCGTAACTGATGTGAAAGA+AGG | - | chr8_1:74642735-74642754 | Msa1214150:intron | 40.0% | |
| GCCTTCTTTCACATCAGTTA+CGG | + | chr8_1:74642739-74642758 | None:intergenic | 40.0% | |
| ! | CATTTTATGGTCTGGGAAAC+AGG | + | chr8_1:74642930-74642949 | None:intergenic | 40.0% |
| ! | GTGCACACATTTTATGGTCT+GGG | + | chr8_1:74642937-74642956 | None:intergenic | 40.0% |
| ! | AGTGCACACATTTTATGGTC+TGG | + | chr8_1:74642938-74642957 | None:intergenic | 40.0% |
| ! | TCGTGAGTGCACACATTTTA+TGG | + | chr8_1:74642943-74642962 | None:intergenic | 40.0% |
| CTATACGACACCAATTCCTA+AGG | + | chr8_1:74643609-74643628 | None:intergenic | 40.0% | |
| !! | CTTGGTGTTCTGTAGTTATG+AGG | - | chr8_1:74643793-74643812 | Msa1214150:intron | 40.0% |
| TTGCACAAAGATAACCCATC+TGG | - | chr8_1:74643832-74643851 | Msa1214150:intron | 40.0% | |
| TGCACAAAGATAACCCATCT+GGG | - | chr8_1:74643833-74643852 | Msa1214150:intron | 40.0% | |
| ! | ATTTGAGTTCACGAGTGTTC+TGG | - | chr8_1:74643860-74643879 | Msa1214150:intron | 40.0% |
| GAACTCTCATTGACATTGTG+TGG | - | chr8_1:74643895-74643914 | Msa1214150:intron | 40.0% | |
| TGTGGCTATTGAGAGACAAT+AGG | - | chr8_1:74643913-74643932 | Msa1214150:intron | 40.0% | |
| GTGGCTATTGAGAGACAATA+GGG | - | chr8_1:74643914-74643933 | Msa1214150:intron | 40.0% | |
| AAAGCTGGTAAATGGAGCAA+TGG | - | chr8_1:74644065-74644084 | Msa1214150:intron | 40.0% | |
| ACAACAAAGGATGTTTGCAG+AGG | - | chr8_1:74644121-74644140 | Msa1214150:intron | 40.0% | |
| TATGTGCTCCAATATAGCAG+AGG | + | chr8_1:74644228-74644247 | None:intergenic | 40.0% | |
| TCTGCTATATTGGAGCACAT+AGG | - | chr8_1:74644227-74644246 | Msa1214150:CDS | 40.0% | |
| TTGTACACAATTGAGCTCAC+AGG | + | chr8_1:74644282-74644301 | None:intergenic | 40.0% | |
| ATGGATCCCATGGATATCGT+TGG | - | chr8_1:74640885-74640904 | Msa1214150:three_prime_UTR | 45.0% | |
| CGATTTGCCAACGATATCCA+TGG | + | chr8_1:74640895-74640914 | None:intergenic | 45.0% | |
| GGATATCGTTGGCAAATCGA+AGG | - | chr8_1:74640896-74640915 | Msa1214150:three_prime_UTR | 45.0% | |
| ! | AGACATGTTGGCGGATGTTT+AGG | + | chr8_1:74641366-74641385 | None:intergenic | 45.0% |
| CAGTTGTCGAAAGGAACCAA+TGG | - | chr8_1:74641506-74641525 | Msa1214150:intron | 45.0% | |
| ! | CTATTGATCGAGTGCTGTGT+AGG | - | chr8_1:74641750-74641769 | Msa1214150:intron | 45.0% |
| TGCTGTGGCCTAGTGATATT+TGG | - | chr8_1:74642057-74642076 | Msa1214150:intron | 45.0% | |
| GCCGGCCATAGTAATATCTT+TGG | - | chr8_1:74642282-74642301 | Msa1214150:intron | 45.0% | |
| AGCATACGAACAACACAAGC+TGG | - | chr8_1:74643336-74643355 | Msa1214150:intron | 45.0% | |
| ATGATAAACAGACCGCGTTG+AGG | - | chr8_1:74643571-74643590 | Msa1214150:intron | 45.0% | |
| TGATAAACAGACCGCGTTGA+GGG | - | chr8_1:74643572-74643591 | Msa1214150:intron | 45.0% | |
| !!! | ATCTGGCTGTTTTGGAGCAA+TGG | + | chr8_1:74644171-74644190 | None:intergenic | 45.0% |
| ATTGCTCCAAAACAGCCAGA+TGG | - | chr8_1:74644170-74644189 | Msa1214150:intron | 45.0% | |
| TGCTCCAATATAGCAGAGGT+CGG | + | chr8_1:74644224-74644243 | None:intergenic | 45.0% | |
| GCTATATTGGAGCACATAGG+AGG | - | chr8_1:74644230-74644249 | Msa1214150:CDS | 45.0% | |
| AATTGAGCTCACAGGAAGCA+CGG | + | chr8_1:74644274-74644293 | None:intergenic | 45.0% | |
| ! | AATGGAGAGCACATCCACAT+TGG | + | chr8_1:74644327-74644346 | None:intergenic | 45.0% |
| GGTGAAGACATGGTTGGGTT+GGG | + | chr8_1:74640708-74640727 | None:intergenic | 50.0% | |
| CAGAGGGTGAAGACATGGTT+GGG | + | chr8_1:74640713-74640732 | None:intergenic | 50.0% | |
| GAGATGCGTGAAGACGAAGA+CGG | + | chr8_1:74640750-74640769 | None:intergenic | 50.0% | |
| GAAGATGCTTCGCTTCCCAA+AGG | - | chr8_1:74640918-74640937 | Msa1214150:exon | 50.0% | |
| ! | CGAGAGAGAAGCGTACCTTT+GGG | + | chr8_1:74640936-74640955 | None:intergenic | 50.0% |
| ! | TCGAGAGAGAAGCGTACCTT+TGG | + | chr8_1:74640937-74640956 | None:intergenic | 50.0% |
| !! | CTTGGTGCCACCAAAACTTG+AGG | + | chr8_1:74641594-74641613 | None:intergenic | 50.0% |
| AGAGCCTTCAATACGTGCTC+AGG | + | chr8_1:74642524-74642543 | None:intergenic | 50.0% | |
| GCACGTATTGAAGGCTCTAC+AGG | - | chr8_1:74642526-74642545 | Msa1214150:intron | 50.0% | |
| CAGATGGCTGTGCAGAACTT+TGG | + | chr8_1:74642572-74642591 | None:intergenic | 50.0% | |
| CAAAGTTCTGCACAGCCATC+TGG | - | chr8_1:74642570-74642589 | Msa1214150:intron | 50.0% | |
| GGCACTGTTATGTTTGGCCA+AGG | - | chr8_1:74642648-74642667 | Msa1214150:CDS | 50.0% | |
| CAGGACGAGGTAATATCTCG+TGG | + | chr8_1:74642967-74642986 | None:intergenic | 50.0% | |
| TGCTATTGTGCTTCAGGACG+AGG | + | chr8_1:74642980-74642999 | None:intergenic | 50.0% | |
| TCCTGAAGCACAATAGCAGC+TGG | - | chr8_1:74642982-74643001 | Msa1214150:intron | 50.0% | |
| ! | TCACATTTTCCCCAGGTGCT+TGG | - | chr8_1:74643283-74643302 | Msa1214150:intron | 50.0% |
| TTTCCCCAGGTGCTTGGATT+TGG | - | chr8_1:74643289-74643308 | Msa1214150:intron | 50.0% | |
| ACAACACAAGCTGGAGACCA+TGG | - | chr8_1:74643345-74643364 | Msa1214150:intron | 50.0% | |
| GATAAACAGACCGCGTTGAG+GGG | - | chr8_1:74643573-74643592 | Msa1214150:intron | 50.0% | |
| CTCCTGCAGACCTTAGGAAT+TGG | - | chr8_1:74643596-74643615 | Msa1214150:intron | 50.0% | |
| CACCAATTCCTAAGGTCTGC+AGG | + | chr8_1:74643601-74643620 | None:intergenic | 50.0% | |
| !! | TTAATGGGGTGTTTTCGGCG+TGG | - | chr8_1:74643649-74643668 | Msa1214150:intron | 50.0% |
| CAATGGAGCTGAGATGACTG+AGG | - | chr8_1:74644082-74644101 | Msa1214150:intron | 50.0% | |
| ! | TGGTCACCATCTGGCTGTTT+TGG | + | chr8_1:74644179-74644198 | None:intergenic | 50.0% |
| AGGACCGACCTCTGCTATAT+TGG | - | chr8_1:74644217-74644236 | Msa1214150:CDS | 50.0% | |
| AGCGAGCGAGCATACGCTTA+GGG | + | chr8_1:74640600-74640619 | None:intergenic | 55.0% | |
| CGCTCGCTCGCAACAAGAAT+TGG | - | chr8_1:74640616-74640635 | Msa1214150:three_prime_UTR | 55.0% | |
| GGGTGAAGACATGGTTGGGT+TGG | + | chr8_1:74640709-74640728 | None:intergenic | 55.0% | |
| GCAGAGGGTGAAGACATGGT+TGG | + | chr8_1:74640714-74640733 | None:intergenic | 55.0% | |
| GAAGACGAAGACGGTGAAGG+AGG | + | chr8_1:74640741-74640760 | None:intergenic | 55.0% | |
| CGTGAAGACGAAGACGGTGA+AGG | + | chr8_1:74640744-74640763 | None:intergenic | 55.0% | |
| TGCGCCTGAGCACGTATTGA+AGG | - | chr8_1:74642517-74642536 | Msa1214150:intron | 55.0% | |
| GCCAGCTGCTATTGTGCTTC+AGG | + | chr8_1:74642986-74643005 | None:intergenic | 55.0% | |
| TCGCCAAATCCAAGCACCTG+GGG | + | chr8_1:74643295-74643314 | None:intergenic | 55.0% | |
| CTCGCCAAATCCAAGCACCT+GGG | + | chr8_1:74643296-74643315 | None:intergenic | 55.0% | |
| ACTCGCCAAATCCAAGCACC+TGG | + | chr8_1:74643297-74643316 | None:intergenic | 55.0% | |
| GAAGCACGGACAGGAGTAAG+AGG | + | chr8_1:74644260-74644279 | None:intergenic | 55.0% | |
| CACTAGTTCGCTGGCCAATG+TGG | - | chr8_1:74644310-74644329 | Msa1214150:intron | 55.0% | |
| GAGCGAGCGAGCATACGCTT+AGG | + | chr8_1:74640601-74640620 | None:intergenic | 60.0% | |
| AGGCGCAGAGGGTGAAGACA+TGG | + | chr8_1:74640718-74640737 | None:intergenic | 60.0% | |
| GACGAAGACGGTGAAGGAGG+AGG | + | chr8_1:74640738-74640757 | None:intergenic | 60.0% | |
| GTTACCGCAAGATGTCCGCG+TGG | - | chr8_1:74641710-74641729 | Msa1214150:intron | 60.0% | |
| CCCACCATTCATCCTAGCGC+GGG | + | chr8_1:74644147-74644166 | None:intergenic | 60.0% | |
| CCCGCGCTAGGATGAATGGT+GGG | - | chr8_1:74644144-74644163 | Msa1214150:intron | 60.0% | |
| CCCCACCATTCATCCTAGCG+CGG | + | chr8_1:74644148-74644167 | None:intergenic | 60.0% | |
| CCGCGCTAGGATGAATGGTG+GGG | - | chr8_1:74644145-74644164 | Msa1214150:intron | 60.0% | |
| ! | AGCTCACAGGAAGCACGGAC+AGG | + | chr8_1:74644269-74644288 | None:intergenic | 60.0% |
| ! | GGTGAAGGAGGAGGCGCAGA+GGG | + | chr8_1:74640729-74640748 | None:intergenic | 65.0% |
| CTCGCCACGCGGACATCTTG+CGG | + | chr8_1:74641717-74641736 | None:intergenic | 65.0% | |
| CTTGGGTGTCTCTCGCCACG+CGG | + | chr8_1:74641728-74641747 | None:intergenic | 65.0% | |
| TCTGCAGGAGCCCCTCAACG+CGG | + | chr8_1:74643586-74643605 | None:intergenic | 65.0% | |
| GAGGGGCTCCTGCAGACCTT+AGG | - | chr8_1:74643590-74643609 | Msa1214150:intron | 65.0% | |
| TGTTTGCAGAGGCCCGCGCT+AGG | - | chr8_1:74644132-74644151 | Msa1214150:intron | 65.0% | |
| GAGGCCCGCGCTAGGATGAA+TGG | - | chr8_1:74644140-74644159 | Msa1214150:intron | 65.0% | |
| GCCCGCGCTAGGATGAATGG+TGG | - | chr8_1:74644143-74644162 | Msa1214150:intron | 65.0% | |
| ! | CGGTGAAGGAGGAGGCGCAG+AGG | + | chr8_1:74640730-74640749 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 74640566 | 74644574 | 74640566 | ID=Msa1214150;Name=Msa1214150 |
| chr8_1 | mRNA | 74640566 | 74644574 | 74640566 | ID=Msa1214150-mRNA-1;Parent=Msa1214150;Name=Msa1214150-mRNA-1;_AED=0.15;_eAED=0.15;_QI=233|0.66|0.85|1|0.66|0.85|7|369|155 |
| chr8_1 | exon | 74640566 | 74641087 | 74640566 | ID=Msa1214150-mRNA-1:exon:25614;Parent=Msa1214150-mRNA-1 |
| chr8_1 | exon | 74641774 | 74641842 | 74641774 | ID=Msa1214150-mRNA-1:exon:25613;Parent=Msa1214150-mRNA-1 |
| chr8_1 | exon | 74642593 | 74642687 | 74642593 | ID=Msa1214150-mRNA-1:exon:25612;Parent=Msa1214150-mRNA-1 |
| chr8_1 | exon | 74643226 | 74643231 | 74643226 | ID=Msa1214150-mRNA-1:exon:25611;Parent=Msa1214150-mRNA-1 |
| chr8_1 | exon | 74643369 | 74643458 | 74643369 | ID=Msa1214150-mRNA-1:exon:25610;Parent=Msa1214150-mRNA-1 |
| chr8_1 | exon | 74644201 | 74644263 | 74644201 | ID=Msa1214150-mRNA-1:exon:25609;Parent=Msa1214150-mRNA-1 |
| chr8_1 | exon | 74644350 | 74644574 | 74644350 | ID=Msa1214150-mRNA-1:exon:25608;Parent=Msa1214150-mRNA-1 |
| chr8_1 | five_prime_UTR | 74644350 | 74644574 | 74644350 | ID=Msa1214150-mRNA-1:five_prime_utr;Parent=Msa1214150-mRNA-1 |
| chr8_1 | five_prime_UTR | 74644256 | 74644263 | 74644256 | ID=Msa1214150-mRNA-1:five_prime_utr;Parent=Msa1214150-mRNA-1 |
| chr8_1 | CDS | 74644201 | 74644255 | 74644201 | ID=Msa1214150-mRNA-1:cds;Parent=Msa1214150-mRNA-1 |
| chr8_1 | CDS | 74643369 | 74643458 | 74643369 | ID=Msa1214150-mRNA-1:cds;Parent=Msa1214150-mRNA-1 |
| chr8_1 | CDS | 74643226 | 74643231 | 74643226 | ID=Msa1214150-mRNA-1:cds;Parent=Msa1214150-mRNA-1 |
| chr8_1 | CDS | 74642593 | 74642687 | 74642593 | ID=Msa1214150-mRNA-1:cds;Parent=Msa1214150-mRNA-1 |
| chr8_1 | CDS | 74641774 | 74641842 | 74641774 | ID=Msa1214150-mRNA-1:cds;Parent=Msa1214150-mRNA-1 |
| chr8_1 | CDS | 74640935 | 74641087 | 74640935 | ID=Msa1214150-mRNA-1:cds;Parent=Msa1214150-mRNA-1 |
| chr8_1 | three_prime_UTR | 74640566 | 74640934 | 74640566 | ID=Msa1214150-mRNA-1:three_prime_utr;Parent=Msa1214150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
