AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1216300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1216300 MtrunA17_Chr4g0065541 85.102 443 66 0 55 497 16 458 0.0 774
Msa1216300 MtrunA17_Chr4g0065541 96.875 96 3 0 556 651 663 758 3.46e-56 203
Msa1216300 MtrunA17_Chr4g0065541 82.667 75 13 0 497 571 525 599 1.79e-30 127
Msa1216300 MtrunA17_Chr4g0065561 79.559 499 90 7 34 529 1 490 0.0 765
Msa1216300 MtrunA17_Chr4g0065561 85.417 96 14 0 556 651 671 766 9.07e-49 182
Msa1216300 MtrunA17_Chr4g0065561 82.192 73 13 0 499 571 535 607 6.70e-30 125
Msa1216300 MtrunA17_Chr4g0065531 82.320 362 64 0 34 395 1 362 0.0 615
Msa1216300 MtrunA17_Chr4g0066051 72.632 190 51 1 34 222 1 190 2.90e-86 269
Msa1216300 MtrunA17_Chr3g0140461 35.938 384 224 8 37 411 31 401 1.36e-65 221
Msa1216300 MtrunA17_Chr3g0140491 37.602 367 208 9 37 395 6 359 6.42e-65 218
Msa1216300 MtrunA17_Chr1g0149821 35.380 342 212 3 60 395 40 378 1.43e-58 202
Msa1216300 MtrunA17_Chr4g0065521 80.208 96 19 0 556 651 262 357 5.45e-46 167
Msa1216300 MtrunA17_Chr4g0065521 81.333 75 14 0 497 571 124 198 1.15e-31 126
Msa1216300 MtrunA17_Chr4g0065521 94.737 57 3 0 441 497 1 57 6.62e-27 112
Msa1216300 MtrunA17_Chr4g0065511 31.105 344 229 5 60 398 35 375 9.17e-44 161
Msa1216300 MtrunA17_Chr4g0065501 33.523 352 214 7 60 398 37 381 3.04e-43 160
Msa1216300 MtrunA17_Chr4g0066061 79.452 73 15 0 499 571 54 126 4.44e-31 118
Msa1216300 MtrunA17_Chr8g0358061 40.606 165 53 4 453 576 60 220 7.26e-26 110
Msa1216300 MtrunA17_Chr8g0357931 54.128 109 40 2 453 561 444 542 1.14e-25 112
Msa1216300 MtrunA17_Chr8g0357791 70.175 57 17 0 505 561 28 84 7.24e-22 90.9
Msa1216300 MtrunA17_Chr4g0065461 45.217 115 58 2 56 167 27 139 2.42e-21 90.5
Msa1216300 MtrunA17_Chr4g0065451 32.927 164 99 4 238 400 1 154 8.10e-21 89.7
Msa1216300 MtrunA17_Chr3g0081071 65.574 61 21 0 501 561 20 80 7.28e-20 89.7
Msa1216300 MtrunA17_Chr3g0081071 30.928 97 66 1 556 651 154 250 4.00e-15 75.9
Msa1216300 MtrunA17_Chr8g0358161 67.213 61 20 0 501 561 137 197 1.24e-19 90.9
Msa1216300 MtrunA17_Chr7g0236531 72.414 58 16 0 499 556 127 184 1.68e-19 90.9
Msa1216300 MtrunA17_Chr8g0358081 67.213 61 20 0 501 561 552 612 1.84e-19 93.2
Msa1216300 MtrunA17_Chr8g0357991 70.690 58 17 0 504 561 579 636 3.22e-19 92.4
Msa1216300 MtrunA17_Chr8g0357981 68.852 61 19 0 501 561 396 456 3.25e-19 92.0
Msa1216300 MtrunA17_Chr8g0361161 61.972 71 27 0 501 571 135 205 3.55e-19 89.7
Msa1216300 MtrunA17_Chr8g0358141 44.444 99 49 2 463 561 137 229 4.37e-19 90.1
Msa1216300 MtrunA17_Chr8g0357961 68.966 58 18 0 504 561 578 635 7.22e-19 91.3
Msa1216300 MtrunA17_Chr8g0358071 65.574 61 21 0 501 561 567 627 8.65e-19 90.9
Msa1216300 MtrunA17_Chr8g0358031 67.213 61 20 0 501 561 570 630 1.03e-18 90.9
Msa1216300 MtrunA17_Chr8g0361141 61.972 71 27 0 501 571 607 677 1.52e-18 90.1
Msa1216300 MtrunA17_Chr8g0358101 65.574 61 21 0 501 561 555 615 1.98e-18 89.7
Msa1216300 MtrunA17_Chr4g0055011 67.241 58 19 0 499 556 160 217 2.77e-18 87.4
Msa1216300 MtrunA17_Chr7g0236551 72.414 58 16 0 499 556 577 634 2.82e-18 89.4
Msa1216300 MtrunA17_Chr7g0236691 70.690 58 17 0 499 556 589 646 3.39e-18 89.0
Msa1216300 MtrunA17_Chr8g0360201 60.563 71 28 0 501 571 497 567 3.69e-18 89.0
Msa1216300 MtrunA17_Chr8g0357881 68.421 57 18 0 505 561 571 627 4.62e-18 88.6
Msa1216300 MtrunA17_Chr3g0081011 67.213 61 20 0 501 561 430 490 5.06e-18 88.2
Msa1216300 MtrunA17_Chr3g0081011 31.206 141 82 3 511 651 533 658 1.94e-14 76.6
Msa1216300 MtrunA17_Chr7g0236571 70.690 58 17 0 499 556 428 485 5.53e-18 88.2
Msa1216300 MtrunA17_Chr7g0236471 70.690 58 17 0 499 556 429 486 5.63e-18 88.2
Msa1216300 MtrunA17_Chr3g0081001 66.129 62 21 0 500 561 433 494 5.71e-18 88.2
Msa1216300 MtrunA17_Chr3g0081001 32.632 95 63 1 557 651 569 662 2.13e-12 70.5
Msa1216300 MtrunA17_Chr8g0357831 73.585 53 14 0 504 556 286 338 6.31e-18 87.4
Msa1216300 MtrunA17_Chr8g0354391 66.667 57 19 0 505 561 29 85 8.27e-18 83.6
Msa1216300 MtrunA17_Chr8g0354391 31.250 96 66 0 556 651 159 254 1.42e-13 71.2
Msa1216300 MtrunA17_Chr8g0358121 65.574 61 21 0 501 561 553 613 1.11e-17 87.4
Msa1216300 MtrunA17_Chr8g0357631 73.585 53 14 0 504 556 562 614 1.16e-17 87.4
Msa1216300 MtrunA17_Chr8g0357761 73.585 53 14 0 504 556 574 626 1.20e-17 87.4
Msa1216300 MtrunA17_Chr7g0236651 70.690 58 17 0 499 556 574 631 1.25e-17 87.4
Msa1216300 MtrunA17_Chr3g0082941 66.129 62 21 0 500 561 263 324 1.27e-17 86.3
Msa1216300 MtrunA17_Chr3g0082941 33.333 96 54 1 556 651 398 483 9.15e-12 67.8
Msa1216300 MtrunA17_Chr7g0236561 68.966 58 18 0 499 556 594 651 1.42e-17 87.0
Msa1216300 MtrunA17_Chr4g0023201 62.500 56 21 0 501 556 15 70 1.74e-17 79.0
Msa1216300 MtrunA17_Chr1g0206551 65.517 58 20 0 499 556 124 181 1.90e-17 84.7
Msa1216300 MtrunA17_Chr8g0357651 71.698 53 15 0 504 556 564 616 2.07e-17 86.7
Msa1216300 MtrunA17_Chr8g0357691 71.698 53 15 0 504 556 572 624 3.14e-17 85.9
Msa1216300 MtrunA17_Chr5g0426941 61.905 63 24 0 499 561 428 490 4.26e-17 85.5
Msa1216300 MtrunA17_Chr3g0081031 63.934 61 22 0 501 561 443 503 4.30e-17 85.5
Msa1216300 MtrunA17_Chr3g0081031 31.959 97 61 2 557 651 578 671 3.73e-11 66.2
Msa1216300 MtrunA17_Chr8g0357861 60.000 65 24 1 504 566 27 91 4.51e-17 77.4
Msa1216300 MtrunA17_Chr7g0236161 67.857 56 18 0 501 556 561 616 5.91e-17 85.1
Msa1216300 MtrunA17_Chr7g0236201 67.857 56 18 0 501 556 561 616 6.17e-17 85.1
Msa1216300 MtrunA17_Chr7g0236121 67.857 56 18 0 501 556 595 650 6.34e-17 85.1
Msa1216300 MtrunA17_Chr8g0354331 68.421 57 18 0 505 561 195 251 7.17e-17 83.6
Msa1216300 MtrunA17_Chr8g0354331 32.292 96 64 1 556 651 325 419 2.21e-12 69.7
Msa1216300 MtrunA17_Chr5g0428521 62.069 58 22 0 499 556 89 146 8.49e-17 80.1
Msa1216300 MtrunA17_Chr7g0236641 65.517 58 20 0 499 556 614 671 8.54e-17 84.7
Msa1216300 MtrunA17_Chr3g0092301 65.517 58 20 0 499 556 19 76 8.67e-17 80.5
Msa1216300 MtrunA17_Chr4g0048631 69.643 56 17 0 501 556 623 678 1.08e-16 84.3
Msa1216300 MtrunA17_Chr2g0280771 63.793 58 21 0 499 556 571 628 1.14e-16 84.0
Msa1216300 MtrunA17_Chr1g0206351 61.905 63 24 0 499 561 442 504 1.21e-16 84.0
Msa1216300 MtrunA17_Chr8g0357711 69.811 53 16 0 504 556 571 623 1.23e-16 84.0
Msa1216300 MtrunA17_Chr2g0280751 67.241 58 19 0 499 556 615 672 1.82e-16 83.6
Msa1216300 MtrunA17_Chr7g0236231 63.793 58 21 0 499 556 607 664 1.91e-16 83.6
Msa1216300 MtrunA17_Chr8g0354441 66.667 57 19 0 505 561 445 501 2.28e-16 83.2
Msa1216300 MtrunA17_Chr1g0206531 65.517 58 20 0 499 556 426 483 2.38e-16 82.8
Msa1216300 MtrunA17_Chr1g0206451 65.517 58 20 0 499 556 461 518 2.51e-16 82.8
Msa1216300 MtrunA17_Chr8g0354421 66.667 57 19 0 505 561 458 514 2.66e-16 82.8
Msa1216300 MtrunA17_Chr7g0236341 67.857 56 18 0 501 556 609 664 2.74e-16 83.2
Msa1216300 MtrunA17_Chr8g0340111 65.517 58 20 0 499 556 593 650 2.84e-16 82.8
Msa1216300 MtrunA17_Chr8g0354431 66.667 57 19 0 505 561 437 493 2.84e-16 82.8
Msa1216300 MtrunA17_Chr8g0354431 32.292 96 64 1 556 651 567 661 3.99e-11 66.2
Msa1216300 MtrunA17_Chr2g0280781 66.071 56 19 0 501 556 601 656 3.02e-16 82.8
Msa1216300 MtrunA17_Chr8g0361431 65.517 58 20 0 499 556 573 630 3.21e-16 82.8
Msa1216300 MtrunA17_Chr2g0280791 63.793 58 21 0 499 556 610 667 3.30e-16 82.8
Msa1216300 MtrunA17_Chr5g0394021 69.231 52 16 0 505 556 416 467 3.59e-16 82.4
Msa1216300 MtrunA17_Chr2g0280801 63.793 58 21 0 499 556 616 673 3.61e-16 82.8
Msa1216300 MtrunA17_Chr2g0280831 62.069 58 22 0 499 556 184 241 3.82e-16 81.3
Msa1216300 MtrunA17_Chr1g0206211 60.345 58 23 0 499 556 116 173 3.95e-16 77.4
Msa1216300 MtrunA17_Chr1g0205771 62.069 58 22 0 499 556 432 489 4.13e-16 82.0
Msa1216300 MtrunA17_Chr8g0354271 64.912 57 20 0 505 561 430 486 4.20e-16 82.0
Msa1216300 MtrunA17_Chr2g0280691 71.429 56 16 0 501 556 617 672 6.32e-16 82.0
Msa1216300 MtrunA17_Chr8g0340051 62.069 58 22 0 499 556 117 174 7.03e-16 79.7
Msa1216300 MtrunA17_Chr8g0354281 64.912 57 20 0 505 561 430 486 7.70e-16 81.3
Msa1216300 MtrunA17_Chr8g0354281 32.292 96 63 1 556 651 560 653 1.33e-11 67.8
Msa1216300 MtrunA17_Chr3g0098781 58.065 62 26 0 501 562 2 63 1.02e-15 77.0
Msa1216300 MtrunA17_Chr8g0340071 62.069 58 22 0 499 556 591 648 1.04e-15 81.3
Msa1216300 MtrunA17_Chr1g0206331 66.667 57 19 0 500 556 425 481 1.10e-15 80.9
Msa1216300 MtrunA17_Chr3g0084691 59.677 62 25 0 501 562 613 674 1.52e-15 80.5
Msa1216300 MtrunA17_Chr3g0093161 63.793 58 21 0 499 556 586 643 1.79e-15 80.5
Msa1216300 MtrunA17_Chr8g0340091 60.000 65 24 1 499 561 620 684 1.89e-15 80.5
Msa1216300 MtrunA17_Chr3g0078531 60.345 58 23 0 499 556 616 673 1.95e-15 80.1
Msa1216300 MtrunA17_Chr4g0023221 64.912 57 20 0 500 556 820 876 1.95e-15 80.5
Msa1216300 MtrunA17_Chr8g0361441 66.071 56 19 0 501 556 597 652 1.97e-15 80.1
Msa1216300 MtrunA17_Chr1g0154331 56.522 69 27 1 501 569 130 195 2.09e-15 78.2
Msa1216300 MtrunA17_Chr1g0206231 63.793 58 21 0 499 556 435 492 2.33e-15 79.7
Msa1216300 MtrunA17_Chr8g0357891 66.038 53 18 0 509 561 15 67 2.40e-15 71.6
Msa1216300 MtrunA17_Chr1g0206461 62.069 58 22 0 499 556 422 479 2.48e-15 79.7
Msa1216300 MtrunA17_Chr1g0206391 60.345 58 23 0 499 556 129 186 2.49e-15 78.2
Msa1216300 MtrunA17_Chr4g0048711 69.231 52 16 0 505 556 24 75 2.50e-15 78.2
Msa1216300 MtrunA17_Chr4g0048711 42.029 69 39 1 557 625 155 222 1.26e-11 66.6
Msa1216300 MtrunA17_Chr4g0020081 63.793 58 21 0 499 556 600 657 2.65e-15 79.7
Msa1216300 MtrunA17_Chr4g0042401 62.295 61 23 0 501 561 594 654 3.01e-15 79.7
Msa1216300 MtrunA17_Chr1g0160921 41.489 94 37 1 463 556 122 197 3.23e-15 78.2
Msa1216300 MtrunA17_Chr3g0078551 66.038 53 18 0 504 556 618 670 3.47e-15 79.3
Msa1216300 MtrunA17_Chr4g0076271 40.336 119 56 5 466 576 25 136 3.50e-15 76.3
Msa1216300 MtrunA17_Chr3g0084661 59.016 61 25 0 501 561 124 184 3.94e-15 77.4
Msa1216300 MtrunA17_Chr2g0280711 64.286 56 20 0 501 556 621 676 3.94e-15 79.3
Msa1216300 MtrunA17_Chr8g0354351 61.404 57 22 0 505 561 428 484 4.01e-15 79.0
Msa1216300 MtrunA17_Chr8g0340081 60.000 65 24 1 499 561 595 659 5.06e-15 79.0
Msa1216300 MtrunA17_Chr2g0280681 60.656 61 24 0 501 561 592 652 5.29e-15 79.0
Msa1216300 MtrunA17_Chr5g0428571 50.667 75 36 1 499 572 387 461 5.65e-15 78.2
Msa1216300 MtrunA17_Chr4g0048781 41.304 92 52 2 556 646 213 303 5.68e-15 76.3
Msa1216300 MtrunA17_Chr4g0048781 67.308 52 17 0 505 556 83 134 1.02e-14 75.5
Msa1216300 MtrunA17_Chr1g0206361 63.333 60 21 1 505 564 438 496 6.50e-15 78.2
Msa1216300 MtrunA17_Chr4g0023111 62.500 56 21 0 501 556 805 860 6.68e-15 78.6
Msa1216300 MtrunA17_Chr1g0206521 67.308 52 17 0 505 556 1072 1123 6.69e-15 79.0
Msa1216300 MtrunA17_Chr1g0206521 67.308 52 17 0 505 556 430 481 6.81e-15 79.0
Msa1216300 MtrunA17_Chr4g0048581 65.517 58 20 0 499 556 620 677 7.83e-15 78.2
Msa1216300 MtrunA17_Chr2g0318811 66.667 57 18 1 500 556 591 646 7.86e-15 78.2
Msa1216300 MtrunA17_Chr8g0361331 55.385 65 29 0 501 565 76 140 8.67e-15 72.0
Msa1216300 MtrunA17_Chr1g0154311 64.286 56 20 0 501 556 442 497 9.05e-15 77.8
Msa1216300 MtrunA17_Chr4g0042361 53.731 67 31 0 504 570 633 699 9.05e-15 78.2
Msa1216300 MtrunA17_Chr3g0084431 58.065 62 26 0 501 562 585 646 1.15e-14 77.8
Msa1216300 MtrunA17_Chr5g0393981 58.621 58 24 0 499 556 485 542 1.19e-14 77.8
Msa1216300 MtrunA17_Chr1g0154371 62.500 56 21 0 501 556 447 502 1.21e-14 77.4
Msa1216300 MtrunA17_Chr3g0084681 59.016 61 25 0 501 561 555 615 1.23e-14 77.8
Msa1216300 MtrunA17_Chr4g0048791 67.925 53 17 0 504 556 626 678 1.27e-14 77.8
Msa1216300 MtrunA17_Chr4g0048791 41.304 92 50 3 556 646 757 845 2.89e-12 70.1
Msa1216300 MtrunA17_Chr5g0394001 61.404 57 22 0 500 556 419 475 1.30e-14 77.4
Msa1216300 MtrunA17_Chr2g0280731 63.158 57 21 0 499 555 639 695 1.33e-14 77.8
Msa1216300 MtrunA17_Chr8g0361281 62.500 56 21 0 501 556 604 659 1.50e-14 77.4
Msa1216300 MtrunA17_Chr4g0048661 67.308 52 17 0 505 556 132 183 1.53e-14 75.5
Msa1216300 MtrunA17_Chr4g0048661 47.143 70 36 1 556 625 262 330 1.20e-13 72.8
Msa1216300 MtrunA17_Chr4g0048731 67.308 52 17 0 505 556 141 192 1.53e-14 75.5
Msa1216300 MtrunA17_Chr4g0042381 59.016 61 25 0 501 561 544 604 1.54e-14 77.4
Msa1216300 MtrunA17_Chr8g0361301 52.857 70 33 0 501 570 597 666 1.56e-14 77.4
Msa1216300 MtrunA17_Chr7g0236511 65.517 58 20 0 499 556 590 647 1.59e-14 77.4
Msa1216300 MtrunA17_Chr1g0206561 56.667 60 26 0 497 556 416 475 1.60e-14 77.0
Msa1216300 MtrunA17_Chr8g0361261 52.857 70 33 0 501 570 628 697 1.70e-14 77.4
Msa1216300 MtrunA17_Chr4g0042391 59.016 61 25 0 501 561 544 604 1.71e-14 77.0
Msa1216300 MtrunA17_Chr3g0084411 62.500 56 21 0 501 556 590 645 1.82e-14 77.0
Msa1216300 MtrunA17_Chr3g0084421 52.113 71 34 0 501 571 553 623 1.90e-14 77.0
Msa1216300 MtrunA17_Chr4g0048801 59.016 61 25 0 501 561 609 669 1.91e-14 77.0
Msa1216300 MtrunA17_Chr6g0474831 64.151 53 19 0 504 556 150 202 1.96e-14 74.7
Msa1216300 MtrunA17_Chr4g0042441 62.295 61 23 0 501 561 591 651 2.11e-14 77.0
Msa1216300 MtrunA17_Chr1g0206401 58.621 58 24 0 499 556 439 496 2.18e-14 76.6
Msa1216300 MtrunA17_Chr6g0484231 65.385 52 18 0 505 556 143 194 2.29e-14 75.5
Msa1216300 MtrunA17_Chr3g0078541 58.621 58 24 0 499 556 619 676 2.51e-14 76.6
Msa1216300 MtrunA17_Chr5g0428601 58.621 58 24 0 499 556 242 299 2.54e-14 75.1
Msa1216300 MtrunA17_Chr1g0206421 63.158 57 21 0 500 556 318 374 2.61e-14 76.3
Msa1216300 MtrunA17_Chr5g0428101 58.621 58 24 0 499 556 590 647 2.76e-14 76.6
Msa1216300 MtrunA17_Chr1g0154351 60.714 56 22 0 501 556 449 504 3.52e-14 75.9
Msa1216300 MtrunA17_Chr2g0318831 67.308 52 17 0 505 556 597 648 3.69e-14 76.3
Msa1216300 MtrunA17_Chr4g0042341 52.941 68 32 0 504 571 617 684 4.68e-14 75.9
Msa1216300 MtrunA17_Chr5g0428581 60.714 56 22 0 501 556 135 190 4.87e-14 74.3
Msa1216300 MtrunA17_Chr5g0428111 58.621 58 24 0 499 556 592 649 5.40e-14 75.5
Msa1216300 MtrunA17_Chr2g0315151 58.621 58 24 0 499 556 755 812 6.21e-14 75.5
Msa1216300 MtrunA17_Chr5g0422921 58.621 58 24 0 499 556 587 644 6.29e-14 75.5
Msa1216300 MtrunA17_Chr7g0239281 46.429 84 44 1 466 549 295 377 6.31e-14 75.1
Msa1216300 MtrunA17_Chr4g0042351 57.377 61 26 0 501 561 544 604 6.69e-14 75.1
Msa1216300 MtrunA17_Chr6g0475111 56.140 57 25 0 500 556 677 733 8.08e-14 75.1
Msa1216300 MtrunA17_Chr3g0084451 54.839 62 28 0 501 562 597 658 8.12e-14 75.1
Msa1216300 MtrunA17_Chr6g0474851 57.895 57 24 0 500 556 18 74 8.40e-14 72.0
Msa1216300 MtrunA17_Chr2g0314841 43.158 95 35 2 463 556 731 807 8.53e-14 75.1
Msa1216300 MtrunA17_Chr8g0347571 56.140 57 25 0 500 556 660 716 8.80e-14 75.1
Msa1216300 MtrunA17_Chr3g0078521 62.264 53 20 0 504 556 613 665 9.97e-14 74.7
Msa1216300 MtrunA17_Chr2g0323231 57.143 56 24 0 501 556 269 324 1.02e-13 73.9
Msa1216300 MtrunA17_Chr8g0357911 66.667 45 15 0 512 556 24 68 1.09e-13 68.2
Msa1216300 MtrunA17_Chr2g0314991 36.885 122 55 3 435 556 1224 1323 1.10e-13 75.1
Msa1216300 MtrunA17_Chr2g0314991 36.066 122 56 3 435 556 258 357 5.87e-13 72.8
Msa1216300 MtrunA17_Chr6g0475201 61.017 59 21 1 504 560 668 726 1.20e-13 74.7
Msa1216300 MtrunA17_Chr2g0314911 37.705 122 54 3 435 556 709 808 1.21e-13 74.7
Msa1216300 MtrunA17_Chr6g0474871 57.895 57 24 0 500 556 655 711 1.41e-13 74.3
Msa1216300 MtrunA17_Chr3g0084441 49.296 71 36 0 501 571 597 667 1.48e-13 74.3
Msa1216300 MtrunA17_Chr6g0474811 57.895 57 24 0 500 556 663 719 1.62e-13 74.3
Msa1216300 MtrunA17_Chr2g0281241 55.556 54 24 0 499 552 153 206 1.71e-13 72.0
Msa1216300 MtrunA17_Chr5g0394011 57.143 63 27 0 499 561 440 502 1.72e-13 73.9
Msa1216300 MtrunA17_Chr1g0206261 63.462 52 19 0 505 556 183 234 1.79e-13 72.8
Msa1216300 MtrunA17_Chr2g0280701 56.897 58 25 0 499 556 589 646 1.79e-13 73.9
Msa1216300 MtrunA17_Chr2g0280701 38.272 81 47 1 556 633 725 805 2.66e-11 67.0
Msa1216300 MtrunA17_Chr2g0314881 44.211 95 34 3 463 556 299 375 1.86e-13 73.6
Msa1216300 MtrunA17_Chr1g0154321 58.929 56 23 0 501 556 459 514 1.93e-13 73.9
Msa1216300 MtrunA17_Chr3g0084491 56.452 62 27 0 501 562 597 658 1.97e-13 73.9
Msa1216300 MtrunA17_Chr8g0376131 63.462 52 19 0 505 556 147 198 2.12e-13 72.4
Msa1216300 MtrunA17_Chr5g0438071 61.111 54 21 0 503 556 753 806 2.38e-13 73.6
Msa1216300 MtrunA17_Chr2g0314901 36.066 122 56 3 435 556 716 815 2.55e-13 73.6
Msa1216300 MtrunA17_Chr2g0312571 54.839 62 28 0 495 556 133 194 2.85e-13 72.4
Msa1216300 MtrunA17_Chr4g0048741 67.308 52 17 0 505 556 627 678 2.91e-13 73.2
Msa1216300 MtrunA17_Chr4g0048741 42.857 70 39 1 556 625 757 825 2.20e-11 67.4
Msa1216300 MtrunA17_Chr2g0314861 61.538 52 20 0 505 556 15 66 3.50e-13 70.5
Msa1216300 MtrunA17_Chr2g0312561 60.000 55 22 0 502 556 135 189 3.54e-13 71.6
Msa1216300 MtrunA17_Chr6g0475091 56.140 57 25 0 500 556 671 727 3.92e-13 72.8
Msa1216300 MtrunA17_Chr2g0314821 44.211 95 34 3 463 556 734 810 4.65e-13 72.8
Msa1216300 MtrunA17_Chr6g0474861 56.140 57 25 0 500 556 376 432 5.16e-13 72.0
Msa1216300 MtrunA17_Chr2g0315061 40.426 94 39 2 463 556 107 183 5.21e-13 71.2
Msa1216300 MtrunA17_Chr8g0359651 58.929 56 23 0 501 556 758 813 5.31e-13 72.4
Msa1216300 MtrunA17_Chr1g0206291 59.615 52 21 0 505 556 447 498 5.43e-13 72.0
Msa1216300 MtrunA17_Chr8g0359691 45.570 79 36 1 478 556 739 810 8.15e-13 72.0
Msa1216300 MtrunA17_Chr8g0361251 57.377 61 26 0 501 561 597 657 9.84e-13 71.6
Msa1216300 MtrunA17_Chr6g0474901 57.895 57 24 0 500 556 656 712 9.94e-13 71.6
Msa1216300 MtrunA17_Chr2g0324481 41.379 87 51 0 504 590 441 527 1.03e-12 71.2
Msa1216300 MtrunA17_Chr8g0359641 63.462 52 19 0 505 556 762 813 1.04e-12 71.6
Msa1216300 MtrunA17_Chr4g0058891 60.377 53 21 0 504 556 380 432 1.14e-12 71.2
Msa1216300 MtrunA17_Chr2g0318841 63.158 57 20 1 500 556 592 647 1.23e-12 71.2
Msa1216300 MtrunA17_Chr3g0109431 57.692 52 22 0 505 556 422 473 1.24e-12 70.9
Msa1216300 MtrunA17_Chr4g0047561 53.226 62 29 0 502 563 139 200 1.42e-12 69.7
Msa1216300 MtrunA17_Chr8g0354301 63.636 44 16 0 518 561 3 46 1.60e-12 63.2
Msa1216300 MtrunA17_Chr7g0226891 55.357 56 25 0 501 556 140 195 2.26e-12 69.3
Msa1216300 MtrunA17_Chr8g0379931 56.140 57 25 0 500 556 797 853 2.34e-12 70.5
Msa1216300 MtrunA17_Chr2g0291501 51.667 60 29 0 497 556 724 783 3.07e-12 70.1
Msa1216300 MtrunA17_Chr8g0358821 55.556 54 24 0 503 556 780 833 3.22e-12 70.1
Msa1216300 MtrunA17_Chr7g0273311 61.538 52 20 0 505 556 14 65 3.33e-12 66.2
Msa1216300 MtrunA17_Chr2g0315081 59.259 54 22 0 503 556 747 800 4.29e-12 69.7
Msa1216300 MtrunA17_Chr2g0281971 53.226 62 29 0 502 563 141 202 4.70e-12 68.2
Msa1216300 MtrunA17_Chr8g0365311 56.364 55 24 0 502 556 196 250 4.94e-12 66.6
Msa1216300 MtrunA17_Chr2g0314961 55.556 54 24 0 502 555 248 301 5.14e-12 68.6
Msa1216300 MtrunA17_Chr3g0081101 27.083 96 69 1 557 651 64 159 5.18e-12 64.3
Msa1216300 MtrunA17_Chr7g0242201 49.206 63 32 0 501 563 135 197 5.80e-12 67.8
Msa1216300 MtrunA17_Chr6g0453561 30.526 95 66 0 557 651 93 187 6.98e-12 64.7
Msa1216300 MtrunA17_Chr4g0071371 50.000 60 30 0 497 556 222 281 7.17e-12 68.2
Msa1216300 MtrunA17_Chr5g0413171 54.386 57 26 0 505 561 182 238 8.85e-12 67.8
Msa1216300 MtrunA17_Chr5g0414561 55.556 54 24 0 503 556 438 491 9.42e-12 68.2
Msa1216300 MtrunA17_Chr4g0048681 43.939 66 36 1 556 621 505 569 9.86e-12 68.2
Msa1216300 MtrunA17_Chr4g0048641 39.583 96 55 3 556 651 683 775 1.20e-11 68.2
Msa1216300 MtrunA17_Chr8g0358781 51.852 54 26 0 503 556 435 488 1.22e-11 67.8
Msa1216300 MtrunA17_Chr3g0112111 52.542 59 26 1 498 556 438 494 1.37e-11 67.8
Msa1216300 MtrunA17_Chr7g0262521 55.357 56 25 0 505 560 442 497 1.58e-11 67.8
Msa1216300 MtrunA17_Chr5g0443691 44.444 72 38 1 505 576 196 265 1.60e-11 66.6
Msa1216300 MtrunA17_Chr8g0369231 48.333 60 31 0 497 556 361 420 1.85e-11 67.4
Msa1216300 MtrunA17_Chr7g0239361 46.053 76 39 2 497 571 443 517 1.85e-11 67.4
Msa1216300 MtrunA17_Chr4g0042421 62.745 51 19 0 501 551 595 645 1.86e-11 67.4
Msa1216300 MtrunA17_Chr3g0119041 55.172 58 26 0 499 556 429 486 1.90e-11 67.4
Msa1216300 MtrunA17_Chr7g0239261 40.426 94 37 1 463 556 410 484 1.91e-11 67.4
Msa1216300 MtrunA17_Chr2g0314201 46.667 60 32 0 497 556 93 152 2.17e-11 64.7
Msa1216300 MtrunA17_Chr7g0239381 53.704 54 25 0 503 556 435 488 2.74e-11 66.6
Msa1216300 MtrunA17_Chr6g0486961 43.421 76 43 0 497 572 773 848 2.77e-11 67.0
Msa1216300 MtrunA17_Chr7g0239371 54.717 53 24 0 504 556 432 484 2.79e-11 66.6
Msa1216300 MtrunA17_Chr5g0443531 61.538 52 20 0 505 556 773 824 2.81e-11 67.0
Msa1216300 MtrunA17_Chr7g0239181 48.333 60 31 0 497 556 437 496 3.21e-11 66.6
Msa1216300 MtrunA17_Chr7g0239331 44.000 75 41 1 497 571 427 500 3.44e-11 66.6
Msa1216300 MtrunA17_Chr6g0453591 44.615 65 36 0 505 569 4 68 3.86e-11 60.5
Msa1216300 MtrunA17_Chr8g0369211 51.923 52 25 0 505 556 722 773 4.73e-11 66.2
Msa1216300 MtrunA17_Chr7g0239221 50.000 60 30 0 497 556 431 490 4.96e-11 65.9
Msa1216300 MtrunA17_Chr1g0191381 50.000 60 30 0 497 556 238 297 5.19e-11 65.1
Msa1216300 MtrunA17_Chr7g0239321 48.333 60 31 0 497 556 426 485 5.44e-11 65.9
Msa1216300 MtrunA17_Chr1g0183041 55.357 56 25 0 505 560 447 502 5.50e-11 65.9
Msa1216300 MtrunA17_Chr7g0239191 48.333 60 31 0 497 556 460 519 5.70e-11 65.9
Msa1216300 MtrunA17_Chr1g0180951 50.000 60 30 0 497 556 184 243 6.09e-11 65.1
Msa1216300 MtrunA17_Chr2g0299041 55.769 52 23 0 505 556 208 259 7.08e-11 64.7
Msa1216300 MtrunA17_Chr5g0409041 35.897 117 48 3 440 556 360 449 7.36e-11 65.1
Msa1216300 MtrunA17_Chr7g0239211 50.877 57 28 0 500 556 432 488 7.43e-11 65.5
Msa1216300 MtrunA17_Chr2g0333181 52.830 53 25 0 504 556 134 186 8.22e-11 64.3
Msa1216300 MtrunA17_Chr2g0288121 51.923 52 25 0 505 556 138 189 9.08e-11 63.9
Msa1216300 MtrunA17_Chr6g0487061 32.479 117 70 2 456 572 761 868 9.31e-11 65.5
Msa1216300 MtrunA17_Chr6g0478111 41.096 73 43 0 500 572 817 889 9.48e-11 65.5
Msa1216300 MtrunA17_Chr3g0140861 45.588 68 31 1 489 556 745 806 9.48e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1216300 AT4G19810.2 40.390 359 209 3 41 398 11 365 6.48e-84 269
Msa1216300 AT4G19810.1 40.390 359 209 3 41 398 11 365 6.48e-84 269
Msa1216300 AT4G19820.1 39.730 370 206 6 36 398 4 363 2.30e-75 246
Msa1216300 AT4G19800.1 36.607 336 211 1 60 395 7 340 6.86e-71 235
Msa1216300 AT4G19760.1 37.119 361 209 5 47 395 7 361 2.69e-62 211
Msa1216300 AT4G19720.1 37.853 354 195 7 60 398 6 349 1.06e-61 210
Msa1216300 AT4G19750.1 36.571 350 214 3 47 394 7 350 4.84e-61 208
Msa1216300 AT4G19730.1 36.760 321 188 5 60 367 14 332 5.91e-59 201
Msa1216300 AT4G19770.1 38.431 255 155 1 141 395 1 253 1.46e-50 176
Msa1216300 AT4G23280.3 45.000 120 47 2 454 556 322 439 3.52e-22 101
Msa1216300 AT4G11460.1 60.526 76 30 0 495 570 433 508 2.65e-20 95.9
Msa1216300 AT4G11480.1 58.537 82 34 0 489 570 407 488 3.61e-20 95.5
Msa1216300 AT4G11460.2 62.500 72 27 0 499 570 359 430 9.48e-20 94.0
Msa1216300 AT4G11460.3 62.500 72 27 0 499 570 434 505 1.27e-19 94.0
Msa1216300 AT4G11480.2 61.111 72 28 0 499 570 412 483 4.20e-19 91.3
Msa1216300 AT4G23290.1 66.667 63 21 0 499 561 408 470 4.90e-19 92.0
Msa1216300 AT4G23290.2 66.667 63 21 0 499 561 451 513 5.83e-19 91.7
Msa1216300 AT4G11480.3 61.111 72 28 0 499 570 412 483 8.41e-19 91.3
Msa1216300 AT4G11480.4 61.111 72 28 0 499 570 409 480 9.05e-19 90.9
Msa1216300 AT4G19740.1 34.307 137 83 2 163 296 23 155 1.29e-18 85.5
Msa1216300 AT4G11470.2 58.333 72 30 0 499 570 432 503 2.36e-18 89.7
Msa1216300 AT4G11470.1 58.333 72 30 0 499 570 427 498 2.38e-18 89.7
Msa1216300 AT3G16030.4 65.517 58 20 0 499 556 636 693 4.89e-18 89.0
Msa1216300 AT3G16030.7 65.517 58 20 0 499 556 636 693 5.46e-18 88.6
Msa1216300 AT3G16030.1 65.517 58 20 0 499 556 615 672 5.67e-18 89.0
Msa1216300 AT3G16030.6 65.517 58 20 0 499 556 636 693 6.08e-18 89.0
Msa1216300 AT3G16030.2 65.517 58 20 0 499 556 492 549 6.35e-18 88.6
Msa1216300 AT4G11900.8 60.000 70 28 0 501 570 558 627 8.12e-18 87.8
Msa1216300 AT4G11900.2 60.000 70 28 0 501 570 627 696 9.75e-18 87.8
Msa1216300 AT4G11900.3 60.000 70 28 0 501 570 627 696 9.75e-18 87.8
Msa1216300 AT4G11900.9 60.000 70 28 0 501 570 558 627 1.01e-17 87.8
Msa1216300 AT4G11900.6 60.000 70 28 0 501 570 627 696 1.04e-17 87.8
Msa1216300 AT4G11900.4 60.000 70 28 0 501 570 627 696 1.04e-17 87.8
Msa1216300 AT4G11900.1 60.000 70 28 0 501 570 627 696 1.12e-17 87.8
Msa1216300 AT4G11900.7 60.000 70 28 0 501 570 627 696 1.23e-17 87.4
Msa1216300 AT4G23140.2 56.164 73 31 1 499 570 439 511 1.92e-17 87.0
Msa1216300 AT4G23140.1 56.164 73 31 1 499 570 439 511 2.02e-17 86.7
Msa1216300 AT4G00960.4 64.286 56 20 0 501 556 146 201 2.21e-17 83.2
Msa1216300 AT4G00960.2 66.071 56 19 0 501 556 52 107 2.29e-17 83.6
Msa1216300 AT1G67520.1 65.517 58 20 0 499 556 509 566 3.06e-17 85.9
Msa1216300 AT1G67520.8 65.517 58 20 0 499 556 376 433 3.59e-17 85.9
Msa1216300 AT1G67520.7 65.517 58 20 0 499 556 376 433 3.59e-17 85.9
Msa1216300 AT1G67520.5 65.517 58 20 0 499 556 347 404 3.89e-17 85.5
Msa1216300 AT1G67520.2 65.517 58 20 0 499 556 584 641 3.95e-17 85.9
Msa1216300 AT1G67520.4 65.517 58 20 0 499 556 541 598 4.86e-17 85.9
Msa1216300 AT1G67520.3 65.517 58 20 0 499 556 584 641 5.15e-17 85.9
Msa1216300 AT1G67520.6 65.517 58 20 0 499 556 591 648 5.32e-17 85.9
Msa1216300 AT4G00960.3 64.286 56 20 0 501 556 59 114 5.84e-17 82.4
Msa1216300 AT4G21230.1 62.121 66 24 1 499 563 421 486 6.01e-17 85.1
Msa1216300 AT4G23220.1 65.517 58 20 0 499 556 424 481 6.34e-17 85.1
Msa1216300 AT4G11530.1 65.517 58 20 0 499 556 440 497 8.54e-17 84.7
Msa1216300 AT4G27300.1 59.677 62 25 0 500 561 589 650 9.67e-17 84.7
Msa1216300 AT4G23240.2 59.677 62 25 0 500 561 117 178 1.00e-16 82.8
Msa1216300 AT4G00960.1 64.286 56 20 0 501 556 146 201 1.37e-16 82.8
Msa1216300 AT4G23160.1 54.795 73 32 1 499 570 447 519 1.60e-16 84.0
Msa1216300 AT1G11330.2 63.793 58 21 0 499 556 612 669 1.98e-16 84.0
Msa1216300 AT1G11330.1 63.793 58 21 0 499 556 610 667 2.01e-16 84.0
Msa1216300 AT1G11330.3 63.793 58 21 0 499 556 612 669 2.04e-16 83.6
Msa1216300 AT4G05200.1 66.071 56 19 0 501 556 437 492 2.14e-16 83.6
Msa1216300 AT4G05200.2 66.071 56 19 0 501 556 455 510 2.40e-16 83.6
Msa1216300 AT4G23320.2 54.795 73 33 0 499 571 271 343 3.09e-16 82.4
Msa1216300 AT4G23320.1 54.795 73 33 0 499 571 271 343 3.09e-16 82.4
Msa1216300 AT1G11350.1 63.793 58 21 0 499 556 600 657 3.18e-16 83.2
Msa1216300 AT4G23320.3 54.795 73 33 0 499 571 292 364 3.26e-16 82.4
Msa1216300 AT4G23240.1 59.677 62 25 0 500 561 424 485 3.36e-16 82.8
Msa1216300 AT4G23180.3 62.069 58 22 0 499 556 436 493 3.45e-16 82.4
Msa1216300 AT4G23180.2 62.069 58 22 0 499 556 436 493 4.41e-16 82.4
Msa1216300 AT4G23190.2 58.730 63 26 0 499 561 438 500 4.48e-16 82.4
Msa1216300 AT4G04570.3 56.757 74 29 2 501 574 274 344 4.77e-16 81.3
Msa1216300 AT4G23200.2 63.793 58 21 0 499 556 424 481 4.84e-16 82.0
Msa1216300 AT1G61430.8 63.158 57 21 0 500 556 578 634 5.63e-16 82.4
Msa1216300 AT1G61430.7 63.158 57 21 0 500 556 578 634 5.63e-16 82.4
Msa1216300 AT4G21410.2 67.857 56 18 0 501 556 447 502 5.65e-16 81.6
Msa1216300 AT1G61430.5 63.158 57 21 0 500 556 581 637 5.75e-16 82.4
Msa1216300 AT1G61430.10 63.158 57 21 0 500 556 555 611 5.82e-16 82.0
Msa1216300 AT4G21390.1 67.857 56 18 0 501 556 619 674 5.91e-16 82.4
Msa1216300 AT1G61430.11 63.158 57 21 0 500 556 555 611 6.02e-16 82.4
Msa1216300 AT1G61430.12 63.158 57 21 0 500 556 555 611 6.02e-16 82.4
Msa1216300 AT1G61430.13 63.158 57 21 0 500 556 555 611 6.02e-16 82.4
Msa1216300 AT4G23190.3 58.730 63 26 0 499 561 360 422 6.34e-16 82.0
Msa1216300 AT4G23190.4 58.730 63 26 0 499 561 360 422 6.34e-16 82.0
Msa1216300 AT1G61430.1 63.158 57 21 0 500 556 581 637 6.44e-16 82.4
Msa1216300 AT1G61430.9 63.158 57 21 0 500 556 578 634 6.48e-16 82.0
Msa1216300 AT4G21390.2 67.857 56 18 0 501 556 619 674 6.57e-16 82.0
Msa1216300 AT4G23180.1 62.069 58 22 0 499 556 436 493 6.63e-16 82.0
Msa1216300 AT4G04540.3 56.757 74 29 2 501 574 443 513 6.69e-16 81.6
Msa1216300 AT4G04540.2 56.000 75 30 2 500 574 442 513 6.83e-16 81.6
Msa1216300 AT4G21410.1 67.857 56 18 0 501 556 322 377 6.84e-16 81.6
Msa1216300 AT4G23190.1 58.730 63 26 0 499 561 438 500 6.85e-16 82.0
Msa1216300 AT4G21410.3 67.857 56 18 0 501 556 447 502 7.73e-16 81.6
Msa1216300 AT4G04540.4 56.757 74 29 2 501 574 414 484 8.68e-16 81.6
Msa1216300 AT4G23200.1 63.793 58 21 0 499 556 424 481 9.01e-16 81.6
Msa1216300 AT1G61440.3 53.521 71 33 0 500 570 572 642 9.03e-16 81.6
Msa1216300 AT1G61440.1 53.521 71 33 0 500 570 567 637 9.07e-16 81.6
Msa1216300 AT4G04540.1 56.757 74 29 2 501 574 443 513 9.50e-16 81.6
Msa1216300 AT4G21400.3 63.158 57 21 0 500 556 438 494 9.50e-16 80.9
Msa1216300 AT4G21400.6 63.158 57 21 0 500 556 478 534 9.59e-16 81.3
Msa1216300 AT4G21400.4 63.158 57 21 0 500 556 478 534 9.59e-16 81.3
Msa1216300 AT4G21400.5 63.158 57 21 0 500 556 478 534 9.59e-16 81.3
Msa1216300 AT1G61440.2 53.521 71 33 0 500 570 597 667 9.63e-16 81.6
Msa1216300 AT4G00970.2 62.500 56 21 0 501 556 434 489 9.63e-16 81.3
Msa1216300 AT4G23230.1 42.424 99 39 2 458 556 402 482 1.00e-15 81.3
Msa1216300 AT4G04570.2 56.757 74 29 2 501 574 438 508 1.21e-15 80.9
Msa1216300 AT4G00970.1 58.730 63 25 1 501 563 434 495 1.21e-15 81.3
Msa1216300 AT1G61400.2 51.351 74 36 0 497 570 594 667 1.22e-15 81.3
Msa1216300 AT4G21400.8 63.158 57 21 0 500 556 339 395 1.25e-15 80.9
Msa1216300 AT4G23260.1 63.793 58 21 0 499 556 427 484 1.29e-15 80.9
Msa1216300 AT4G23260.2 63.793 58 21 0 499 556 416 473 1.30e-15 80.9
Msa1216300 AT4G03230.3 60.000 65 22 1 492 556 610 670 1.35e-15 81.3
Msa1216300 AT4G03230.2 60.000 65 22 1 492 556 675 735 1.35e-15 81.3
Msa1216300 AT4G03230.6 60.000 65 22 1 492 556 675 735 1.35e-15 81.3
Msa1216300 AT4G21400.2 63.158 57 21 0 500 556 438 494 1.40e-15 80.9
Msa1216300 AT4G21400.7 63.158 57 21 0 500 556 440 496 1.41e-15 80.9
Msa1216300 AT4G03230.5 60.000 65 22 1 492 556 703 763 1.41e-15 81.3
Msa1216300 AT4G03230.7 60.000 65 22 1 492 556 618 678 1.43e-15 81.3
Msa1216300 AT4G21400.1 63.158 57 21 0 500 556 450 506 1.49e-15 80.9
Msa1216300 AT1G61550.1 61.404 57 22 0 500 556 578 634 1.54e-15 80.9
Msa1216300 AT1G61500.2 53.623 69 27 1 500 563 562 630 1.60e-15 80.9
Msa1216300 AT4G23250.1 63.793 58 21 0 499 556 447 504 1.60e-15 80.9
Msa1216300 AT4G04570.1 56.757 74 29 2 501 574 438 508 1.63e-15 80.9
Msa1216300 AT1G61500.3 53.623 69 27 1 500 563 585 653 1.64e-15 80.9
Msa1216300 AT4G03230.4 60.000 65 22 1 492 556 775 835 1.74e-15 80.9
Msa1216300 AT4G03230.1 60.000 65 22 1 492 556 775 835 1.74e-15 80.9
Msa1216300 AT1G61500.1 53.623 69 27 1 500 563 580 648 1.75e-15 80.9
Msa1216300 AT4G23250.3 63.793 58 21 0 499 556 442 499 1.78e-15 80.9
Msa1216300 AT4G03230.8 60.000 65 22 1 492 556 617 677 1.92e-15 80.9
Msa1216300 AT4G23250.2 63.793 58 21 0 499 556 442 499 2.13e-15 80.9
Msa1216300 AT1G61480.1 55.072 69 26 1 500 563 585 653 2.15e-15 80.5
Msa1216300 AT1G61400.1 52.113 71 34 0 500 570 589 659 2.16e-15 80.5
Msa1216300 AT1G61490.3 57.895 57 24 0 500 556 429 485 3.27e-15 79.7
Msa1216300 AT1G61610.2 69.231 52 16 0 505 556 619 670 3.58e-15 79.7
Msa1216300 AT4G23300.1 58.730 63 26 0 499 561 441 503 3.62e-15 79.7
Msa1216300 AT1G61380.2 56.061 66 29 0 505 570 435 500 3.74e-15 79.7
Msa1216300 AT1G61490.6 57.895 57 24 0 500 556 553 609 3.93e-15 79.7
Msa1216300 AT1G61490.7 57.895 57 24 0 500 556 553 609 3.93e-15 79.7
Msa1216300 AT1G61610.1 69.231 52 16 0 505 556 619 670 3.96e-15 79.7
Msa1216300 AT1G61490.4 57.895 57 24 0 500 556 579 635 4.16e-15 79.7
Msa1216300 AT1G61490.1 57.895 57 24 0 500 556 579 635 4.16e-15 79.7
Msa1216300 AT1G61490.2 57.895 57 24 0 500 556 579 635 4.16e-15 79.7
Msa1216300 AT1G61490.5 57.895 57 24 0 500 556 579 635 4.16e-15 79.7
Msa1216300 AT1G61380.1 56.061 66 29 0 505 570 582 647 4.42e-15 79.7
Msa1216300 AT1G11300.2 63.158 57 21 0 500 556 583 639 4.54e-15 79.3
Msa1216300 AT1G11300.1 63.158 57 21 0 500 556 598 654 4.59e-15 79.3
Msa1216300 AT4G23270.2 65.385 52 18 0 505 556 420 471 4.60e-15 79.3
Msa1216300 AT4G23270.1 65.385 52 18 0 505 556 420 471 4.60e-15 79.3
Msa1216300 AT4G23270.3 65.385 52 18 0 505 556 420 471 4.70e-15 79.3
Msa1216300 AT4G04490.1 56.522 69 27 1 501 569 430 495 6.58e-15 79.0
Msa1216300 AT1G61420.5 50.725 69 29 1 500 563 435 503 6.88e-15 78.6
Msa1216300 AT4G23280.1 63.462 52 19 0 505 556 438 489 6.95e-15 78.6
Msa1216300 AT1G61420.3 50.725 69 29 1 500 563 433 501 7.17e-15 78.6
Msa1216300 AT4G23280.2 63.462 52 19 0 505 556 436 487 7.24e-15 78.6
Msa1216300 AT1G61360.1 49.315 73 37 0 500 572 587 659 8.71e-15 78.6
Msa1216300 AT1G11340.1 49.333 75 38 0 497 571 601 675 8.94e-15 78.6
Msa1216300 AT1G11340.3 49.333 75 38 0 497 571 669 743 9.10e-15 78.6
Msa1216300 AT1G61360.2 49.315 73 37 0 500 572 506 578 9.24e-15 78.6
Msa1216300 AT1G61360.3 49.315 73 37 0 500 572 506 578 9.24e-15 78.6
Msa1216300 AT1G61360.4 49.315 73 37 0 500 572 506 578 9.24e-15 78.6
Msa1216300 AT1G11303.1 62.069 58 22 0 499 556 597 654 9.32e-15 78.6
Msa1216300 AT4G04500.2 56.522 69 27 2 501 569 435 500 9.33e-15 77.8
Msa1216300 AT4G04500.3 56.522 69 27 2 501 569 435 500 9.33e-15 77.8
Msa1216300 AT1G61420.1 50.725 69 29 1 500 563 583 651 9.63e-15 78.6
Msa1216300 AT1G61420.2 50.725 69 29 1 500 563 585 653 9.82e-15 78.6
Msa1216300 AT1G61420.4 50.725 69 29 1 500 563 585 653 9.82e-15 78.6
Msa1216300 AT4G04500.1 56.522 69 27 2 501 569 435 500 9.98e-15 78.2
Msa1216300 AT1G11340.2 49.333 75 38 0 497 571 669 743 1.06e-14 78.2
Msa1216300 AT4G27290.2 69.231 52 16 0 505 556 605 656 1.07e-14 78.2
Msa1216300 AT4G23310.2 63.462 52 19 0 505 556 562 613 1.08e-14 78.2
Msa1216300 AT4G27290.1 69.231 52 16 0 505 556 559 610 1.12e-14 78.2
Msa1216300 AT4G23310.1 63.462 52 19 0 505 556 602 653 1.14e-14 78.2
Msa1216300 AT4G04510.2 50.000 74 34 1 501 574 431 501 1.55e-14 77.4
Msa1216300 AT1G61370.2 60.714 56 22 0 501 556 440 495 1.55e-14 77.4
Msa1216300 AT4G04510.1 50.000 74 34 1 501 574 429 499 1.60e-14 77.4
Msa1216300 AT1G11280.5 53.030 66 31 0 505 570 599 664 1.64e-14 77.4
Msa1216300 AT1G11280.3 53.030 66 31 0 505 570 587 652 1.76e-14 77.8
Msa1216300 AT1G11280.2 53.030 66 31 0 505 570 599 664 1.78e-14 77.8
Msa1216300 AT1G11280.4 53.030 66 31 0 505 570 597 662 1.84e-14 77.4
Msa1216300 AT1G11280.1 53.030 66 31 0 505 570 609 674 1.91e-14 77.4
Msa1216300 AT1G61370.1 60.714 56 22 0 501 556 591 646 1.93e-14 77.4
Msa1216300 AT1G61460.1 28.169 213 86 7 500 651 543 749 2.12e-14 77.4
Msa1216300 AT4G23210.2 50.667 75 36 1 499 572 446 520 2.62e-14 76.6
Msa1216300 AT4G23210.4 50.667 75 36 1 499 572 446 520 2.62e-14 76.6
Msa1216300 AT4G23210.1 50.667 75 36 1 499 572 446 520 2.90e-14 76.6
Msa1216300 AT4G23210.5 50.667 75 36 1 499 572 446 520 3.12e-14 76.3
Msa1216300 AT4G23150.1 60.345 58 23 0 499 556 424 481 3.40e-14 76.6
Msa1216300 AT4G23210.3 50.667 75 36 1 499 572 446 520 4.52e-14 76.3
Msa1216300 AT4G23130.3 61.538 52 20 0 505 556 438 489 4.77e-14 75.9
Msa1216300 AT4G23130.1 61.538 52 20 0 505 556 434 485 6.28e-14 75.5
Msa1216300 AT4G23130.2 61.538 52 20 0 505 556 438 489 6.37e-14 75.5
Msa1216300 AT1G61390.2 59.615 52 21 0 505 556 446 497 6.54e-14 75.5
Msa1216300 AT1G61390.1 59.615 52 21 0 505 556 614 665 7.07e-14 75.9
Msa1216300 AT1G65790.1 62.500 56 21 0 501 556 609 664 1.01e-13 75.1
Msa1216300 AT1G70520.1 57.627 59 25 0 505 563 419 477 1.12e-13 74.7
Msa1216300 AT4G21380.1 65.385 52 18 0 505 556 620 671 1.13e-13 75.1
Msa1216300 AT1G65800.1 62.500 56 21 0 501 556 613 668 1.14e-13 75.1
Msa1216300 AT4G11490.1 51.351 74 35 1 497 569 407 480 1.49e-13 74.3
Msa1216300 AT4G38830.1 56.061 66 26 2 505 570 438 500 1.74e-13 74.3
Msa1216300 AT3G45860.1 62.264 53 20 0 504 556 444 496 2.35e-13 73.9
Msa1216300 AT3G14840.2 44.211 95 34 3 463 556 742 818 2.82e-13 73.9
Msa1216300 AT1G56120.3 57.143 56 24 0 501 556 633 688 5.20e-13 72.8
Msa1216300 AT1G56120.2 57.143 56 24 0 501 556 781 836 5.81e-13 72.8
Msa1216300 AT1G56120.1 57.143 56 24 0 501 556 799 854 6.16e-13 72.8
Msa1216300 AT1G53420.1 47.500 80 33 2 478 556 699 770 6.86e-13 72.8
Msa1216300 AT5G40380.3 58.929 56 23 0 501 556 405 460 6.88e-13 72.0
Msa1216300 AT5G40380.2 58.929 56 23 0 501 556 405 460 7.70e-13 72.0
Msa1216300 AT5G40380.1 58.929 56 23 0 501 556 405 460 8.08e-13 72.0
Msa1216300 AT3G55550.1 57.407 54 23 0 503 556 439 492 8.54e-13 72.0
Msa1216300 AT1G70740.2 59.615 52 21 0 505 556 144 195 2.36e-12 70.1
Msa1216300 AT1G70740.1 59.615 52 21 0 505 556 156 207 2.36e-12 70.1
Msa1216300 AT1G16670.1 54.237 59 27 0 498 556 131 189 3.59e-12 68.9
Msa1216300 AT1G53430.2 44.681 94 35 3 463 556 698 774 3.67e-12 70.5
Msa1216300 AT1G53430.1 44.681 94 35 3 463 556 739 815 3.92e-12 70.1
Msa1216300 AT1G56145.1 51.667 60 29 0 497 556 772 831 4.34e-12 70.1
Msa1216300 AT1G56145.3 51.667 60 29 0 497 556 669 728 4.45e-12 70.1
Msa1216300 AT5G01540.1 41.860 86 49 1 499 583 456 541 4.76e-12 69.7
Msa1216300 AT1G53440.1 43.617 94 36 3 463 556 737 813 5.11e-12 69.7
Msa1216300 AT1G56145.2 53.571 56 26 0 501 556 803 858 5.87e-12 69.7
Msa1216300 AT1G56140.1 50.000 60 30 0 497 556 778 837 6.17e-12 69.7
Msa1216300 AT1G29740.2 41.489 94 36 2 463 556 747 821 7.45e-12 69.3
Msa1216300 AT1G29750.1 53.571 56 26 0 501 556 757 812 8.11e-12 69.3
Msa1216300 AT1G07650.4 61.538 52 20 0 505 556 561 612 8.56e-12 68.9
Msa1216300 AT1G29740.1 41.489 94 36 2 463 556 747 821 8.60e-12 69.3
Msa1216300 AT1G29750.2 53.571 56 26 0 501 556 772 827 8.66e-12 68.9
Msa1216300 AT4G28670.1 56.667 60 24 1 497 556 417 474 8.77e-12 68.6
Msa1216300 AT1G29750.3 53.571 56 26 0 501 556 772 827 9.27e-12 68.9
Msa1216300 AT5G01550.1 51.667 60 28 1 498 556 469 528 1.01e-11 68.6
Msa1216300 AT1G07650.2 61.538 52 20 0 505 556 780 831 1.03e-11 68.9
Msa1216300 AT1G07650.3 61.538 52 20 0 505 556 748 799 1.07e-11 68.9
Msa1216300 AT1G07650.1 61.538 52 20 0 505 556 774 825 1.07e-11 68.9
Msa1216300 AT5G59260.1 38.144 97 42 1 460 556 422 500 1.12e-11 68.6
Msa1216300 AT1G56130.3 51.786 56 27 0 501 556 584 639 1.26e-11 68.6
Msa1216300 AT1G79620.2 46.032 63 34 0 494 556 720 782 1.27e-11 68.6
Msa1216300 AT1G56130.1 51.786 56 27 0 501 556 635 690 1.31e-11 68.6
Msa1216300 AT1G56130.2 51.786 56 27 0 501 556 783 838 1.33e-11 68.6
Msa1216300 AT4G02410.1 51.667 60 29 0 497 556 441 500 1.44e-11 68.2
Msa1216300 AT1G79620.5 46.032 63 34 0 494 556 746 808 1.45e-11 68.6
Msa1216300 AT5G01560.1 52.542 59 27 1 499 556 453 511 1.49e-11 68.2
Msa1216300 AT1G79620.1 46.032 63 34 0 494 556 720 782 1.52e-11 68.2
Msa1216300 AT5G65710.1 45.714 70 38 0 487 556 768 837 1.62e-11 68.2
Msa1216300 AT3G08870.2 41.667 84 49 0 500 583 480 563 2.05e-11 67.8
Msa1216300 AT5G59270.2 37.113 97 43 1 460 556 435 513 2.13e-11 67.4
Msa1216300 AT5G49760.1 41.975 81 47 0 494 574 713 793 2.17e-11 67.8
Msa1216300 AT5G59270.3 37.113 97 43 1 460 556 419 497 2.19e-11 67.4
Msa1216300 AT3G08870.1 41.667 84 49 0 500 583 459 542 2.22e-11 67.4
Msa1216300 AT5G59270.1 37.113 97 43 1 460 556 416 494 2.28e-11 67.4
Msa1216300 AT1G49270.1 50.000 60 30 0 497 556 422 481 2.45e-11 67.4
Msa1216300 AT4G32710.1 47.761 67 35 0 497 563 474 540 2.65e-11 67.4
Msa1216300 AT3G20530.2 49.180 61 31 0 496 556 170 230 2.94e-11 65.5
Msa1216300 AT1G70530.3 50.820 61 29 1 497 556 408 468 2.96e-11 66.6
Msa1216300 AT1G70530.2 50.820 61 29 1 497 556 408 468 3.03e-11 67.0
Msa1216300 AT3G20530.1 49.180 61 31 0 496 556 170 230 3.35e-11 66.2
Msa1216300 AT2G37710.1 46.667 60 32 0 497 556 433 492 3.69e-11 66.6
Msa1216300 AT1G70530.1 50.820 61 29 1 497 556 408 468 3.87e-11 66.6
Msa1216300 AT2G20300.1 55.357 56 25 0 505 560 439 494 4.64e-11 66.6
Msa1216300 AT1G70130.1 44.000 75 41 1 497 571 420 493 6.63e-11 65.9
Msa1216300 AT4G02420.1 46.667 60 32 0 497 556 436 495 7.51e-11 65.9
Msa1216300 AT1G31420.1 35.043 117 50 2 440 556 360 450 7.58e-11 65.9
Msa1216300 AT1G31420.3 35.043 117 50 2 440 556 360 450 7.58e-11 65.9
Msa1216300 AT5G49780.1 47.619 63 33 0 494 556 616 678 8.34e-11 65.9
Msa1216300 AT3G53810.1 53.846 52 24 0 505 556 441 492 8.61e-11 65.5
Msa1216300 AT5G49780.2 47.619 63 33 0 494 556 737 799 8.71e-11 65.9
Msa1216300 AT5G49780.3 47.619 63 33 0 494 556 715 777 9.25e-11 65.9

Find 132 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTGTATTGTATTGTTTA+AGG 0.091639 8_1:+77962925 None:intergenic
TGAATCAATGCAAAAGTATT+TGG 0.139276 8_1:-77962331 Msa1216300:CDS
ATCCAAACAGCAAGAAAATA+TGG 0.208063 8_1:-77962540 Msa1216300:CDS
TCTTCTAACAAACTTGTAAT+TGG 0.213725 8_1:-77962171 Msa1216300:CDS
GGGTAAAGAACTTGCAAATT+TGG 0.234811 8_1:-77962478 Msa1216300:CDS
AAAAGTTACATTAGAAGTTT+TGG 0.247354 8_1:-77962033 Msa1216300:CDS
AATCCTAAGATATCAGATTT+TGG 0.256714 8_1:-77959994 Msa1216300:intron
TATTACAATGGAAGGTGATA+TGG 0.269757 8_1:-77962070 Msa1216300:CDS
TTACTTCTCAAAAGAAAATA+AGG 0.271785 8_1:-77960972 Msa1216300:CDS
GGCAATGAAATTTCAGCTTC+TGG 0.274753 8_1:-77962804 Msa1216300:CDS
AAGGTTGGAGAGGGTGGATT+TGG 0.289239 8_1:-77960953 Msa1216300:CDS
ATACAAAGCTGCATGAAAAT+TGG 0.296652 8_1:+77962254 None:intergenic
TGATTGCTATCTTCCTAAAA+AGG 0.299430 8_1:-77962286 Msa1216300:CDS
CTCAAATGTTGCCAAGATAA+TGG 0.299579 8_1:-77959282 None:intergenic
AACACCACCTTCGCCTGATT+TGG 0.310494 8_1:+77962116 None:intergenic
CGATTCGCAATTCCTTCAAT+AGG 0.316519 8_1:+77962451 None:intergenic
ATACCAAAATCTGATATCTT+AGG 0.329456 8_1:+77959991 None:intergenic
GTTTCAAGGCATAGACCTTT+GGG 0.333126 8_1:-77962517 Msa1216300:CDS
AAAGCTGGTTATTACTATTC+CGG 0.337429 8_1:-77962825 Msa1216300:CDS
CAATTGCAGACACCACTTCT+TGG 0.338297 8_1:-77962851 Msa1216300:CDS
GGAAATCAATTCTTCTAGAT+TGG 0.338530 8_1:-77960140 Msa1216300:CDS
GGTTGGGAAAATACTGATTC+AGG 0.349550 8_1:-77962222 Msa1216300:CDS
GGTTTCAAGGCATAGACCTT+TGG 0.355405 8_1:-77962518 Msa1216300:CDS
GCAAGTTCTTTACCCTGCTT+TGG 0.361725 8_1:+77962486 None:intergenic
ATTTCACTGTTGCATCTACT+TGG 0.362903 8_1:-77961966 Msa1216300:CDS
AAGGTTGCTGATAGTTGTTT+TGG 0.369564 8_1:-77961296 Msa1216300:CDS
TCGGTGGATTATAGTAAAAT+TGG 0.370744 8_1:+77960056 None:intergenic
ATACATTTGTCTCACACAAC+AGG 0.376413 8_1:-77962978 Msa1216300:CDS
GCAGCTTTGTATGGTTCATC+TGG 0.383734 8_1:-77962243 Msa1216300:CDS
TTTGACTGCTACCGTTCTCT+TGG 0.385716 8_1:-77961266 Msa1216300:CDS
TTATATCTTCATTACCTTTG+TGG 0.389309 8_1:+77961221 None:intergenic
GTAATTGGTTTGCCTTATCA+TGG 0.392664 8_1:-77962156 Msa1216300:CDS
TCTAGAAGAATTGATTTCCT+TGG 0.394899 8_1:+77960144 None:intergenic
TTTGTATGGTTCATCTGGTT+GGG 0.396759 8_1:-77962238 Msa1216300:CDS
AAGTTGGGAATGATGACAAT+TGG 0.398094 8_1:-77961861 Msa1216300:CDS
AGAAGCTGAAATTTCATTGC+CGG 0.398592 8_1:+77962806 None:intergenic
ATTGAAAAGGCAGGCATGTT+GGG 0.404373 8_1:+77959382 None:intergenic
CTTTGTATGGTTCATCTGGT+TGG 0.405840 8_1:-77962239 Msa1216300:CDS
GAACAAACATGAAGATGATA+AGG 0.408815 8_1:-77959359 Msa1216300:CDS
AATGCAAAAGTATTTGGATT+GGG 0.411052 8_1:-77962325 Msa1216300:CDS
GTTACAGTGTGTTCCAAGTT+GGG 0.413412 8_1:-77961876 Msa1216300:CDS
GAAGAAGATCTCAATGGAAA+TGG 0.416553 8_1:-77961043 Msa1216300:CDS
GCTTATCGACACCATTATCT+TGG 0.418930 8_1:+77959271 None:intergenic
TTCATGTTTGTTCATTGAAA+AGG 0.419090 8_1:+77959369 None:intergenic
AATTGCAGACACCACTTCTT+GGG 0.421474 8_1:-77962850 Msa1216300:CDS
GATTCGCAATTCCTTCAATA+GGG 0.422849 8_1:+77962452 None:intergenic
TTTCCATTGAGATCTTCTTC+AGG 0.423907 8_1:+77961046 None:intergenic
TGTGGAAGTTATTAAAGAAA+AGG 0.428768 8_1:-77961929 Msa1216300:CDS
TTGAGTAAGTTGTGAGAAAG+AGG 0.429435 8_1:+77962871 None:intergenic
GCAAGAAAATATGGGTTTCA+AGG 0.430101 8_1:-77962531 Msa1216300:CDS
GCATGGAGACTTGCCAAATC+AGG 0.435113 8_1:-77962129 Msa1216300:CDS
TGTCTCACACAACAGGGTTA+AGG 0.439595 8_1:-77962971 Msa1216300:CDS
CAATGCAAAAGTATTTGGAT+TGG 0.441263 8_1:-77962326 Msa1216300:CDS
ACACAACAGGGTTAAGGTTA+AGG 0.447283 8_1:-77962965 Msa1216300:CDS
AAGAATGAAGGTACGCCAAT+TGG 0.448413 8_1:-77959409 Msa1216300:CDS
TAAAAGCAAAAGCACATAAG+AGG 0.450383 8_1:+77962757 None:intergenic
TTGACTGCTACCGTTCTCTT+GGG 0.450386 8_1:-77961265 Msa1216300:CDS
TGATTCAAAAGGGTAACTTA+AGG 0.452224 8_1:+77962347 None:intergenic
GAAAATAAGGTTGGAGAGGG+TGG 0.452929 8_1:-77960959 Msa1216300:CDS
TAGTAAAATTGGAGTACTCT+TGG 0.455145 8_1:+77960067 None:intergenic
TTGGGGAGTCTTACCAAAGC+AGG 0.455624 8_1:-77962499 Msa1216300:CDS
CTCCATGCATATCCATGATA+AGG 0.456355 8_1:+77962144 None:intergenic
ATATTATAACGAGACATTTG+TGG 0.458289 8_1:-77961995 Msa1216300:CDS
CATTACTAGCTTTAATATCT+CGG 0.458502 8_1:+77960037 None:intergenic
AATTGTCATCATTCCCAACT+TGG 0.458868 8_1:+77961863 None:intergenic
ATCAAAGAGTGGAGGAAAAG+AGG 0.459568 8_1:-77962198 Msa1216300:CDS
GGTGTTGGATCACCAGCATC+TGG 0.468085 8_1:-77962099 Msa1216300:CDS
CATTGAAAAGGCAGGCATGT+TGG 0.472934 8_1:+77959381 None:intergenic
AAATTTGGCAACCCTATTGA+AGG 0.473182 8_1:-77962463 Msa1216300:CDS
TTCTCAAAAGAAAATAAGGT+TGG 0.487505 8_1:-77960968 Msa1216300:CDS
GGATCACCAGCATCTGGTCC+TGG 0.490302 8_1:-77962093 Msa1216300:CDS
AATCAATTCTTCTAGATTGG+AGG 0.493066 8_1:-77960137 Msa1216300:CDS
GGTTACAGTGTGTTCCAAGT+TGG 0.494423 8_1:-77961877 Msa1216300:CDS
CAAGAATGATGTACAGATTG+AGG 0.495713 8_1:-77961084 Msa1216300:CDS
ATTACAATGGAAGGTGATAT+GGG 0.502411 8_1:-77962069 Msa1216300:CDS
AGTTGGGAATGATGACAATT+GGG 0.503569 8_1:-77961860 Msa1216300:CDS
TCCAAACAGCAAGAAAATAT+GGG 0.510160 8_1:-77962539 Msa1216300:CDS
AACAAACATGAAGATGATAA+GGG 0.511761 8_1:-77959358 Msa1216300:CDS
GATGTTGTATCATCCAATGA+AGG 0.517250 8_1:+77959529 None:intergenic
TGGATTTGGTGCAGTGTACA+AGG 0.518155 8_1:-77960939 Msa1216300:intron
ACCACTTCTTGGGTAAAAGC+TGG 0.521104 8_1:-77962840 Msa1216300:CDS
CAAATTTACCTGCCGTTGAA+AGG 0.522203 8_1:+77961836 None:intergenic
ATATCTTAGGATTCATCTCA+TGG 0.523001 8_1:+77960004 None:intergenic
AATTGGGTCCTTTCAACGGC+AGG 0.523694 8_1:-77961844 Msa1216300:intron
GCCATCACCAAAACTAACTC+TGG 0.531511 8_1:+77962396 None:intergenic
GGCATGTTGGGAGTACCAAT+TGG 0.533719 8_1:+77959394 None:intergenic
GATAAAAGAGTTGTAACAGA+TGG 0.537757 8_1:+77962648 None:intergenic
TTGTGAGAAAGAGGAAGACA+AGG 0.537872 8_1:+77962880 None:intergenic
TTTCACTGTTGCATCTACTT+GGG 0.538869 8_1:-77961965 Msa1216300:CDS
AGGGAGATACATTTAACTCC+GGG 0.542744 8_1:-77959339 Msa1216300:CDS
TGCTACCGTTCTCTTGGGAA+TGG 0.543934 8_1:-77961260 Msa1216300:CDS
AAATCAGGCGAAGGTGGTGT+TGG 0.545271 8_1:-77962114 Msa1216300:CDS
TCAACGTAGAATGGGAGTCT+TGG 0.548365 8_1:-77963015 None:intergenic
AAGGGAGATACATTTAACTC+CGG 0.549560 8_1:-77959340 Msa1216300:CDS
GCACCTGAAGAAGATCTCAA+TGG 0.554619 8_1:-77961049 Msa1216300:CDS
AGACGCGTGAATATCATTGA+GGG 0.555799 8_1:-77960114 Msa1216300:CDS
CTTGCCAAATCAGGCGAAGG+TGG 0.562963 8_1:-77962120 Msa1216300:CDS
TGTTTGTTCATTGAAAAGGC+AGG 0.566249 8_1:+77959373 None:intergenic
TGACAATTGGGTCCTTTCAA+CGG 0.568502 8_1:-77961848 Msa1216300:CDS
GTAATACCAGGACCAGATGC+TGG 0.570402 8_1:+77962087 None:intergenic
GTGGATGGAAGGGAGAGGTG+TGG 0.572282 8_1:-77959563 Msa1216300:intron
ATCATTGAGGGGATTACTCA+AGG 0.573893 8_1:-77960102 Msa1216300:CDS
TGCCTTATCATGGATATGCA+TGG 0.578289 8_1:-77962146 Msa1216300:CDS
GAGACGCGTGAATATCATTG+AGG 0.580248 8_1:-77960115 Msa1216300:CDS
GATTCACTAATCAAGAATGA+AGG 0.580587 8_1:-77959421 Msa1216300:CDS
CATCTTTATAAACTCTTCTG+AGG 0.581084 8_1:-77962715 Msa1216300:CDS
ATGAAGATCATCATAACAGA+AGG 0.581591 8_1:-77961315 Msa1216300:CDS
GGTCCTGGTATTACAATGGA+AGG 0.586650 8_1:-77962078 Msa1216300:CDS
AAAAGAAAATAAGGTTGGAG+AGG 0.586821 8_1:-77960963 Msa1216300:CDS
TGTGAGAAAGAGGAAGACAA+GGG 0.587847 8_1:+77962881 None:intergenic
AGTACTCTTGGAGATAAAGA+AGG 0.592827 8_1:+77960079 None:intergenic
TTTGTGTGTTCAAGAGAACT+CGG 0.601260 8_1:-77959470 Msa1216300:CDS
TGGGGAGTCTTACCAAAGCA+GGG 0.604421 8_1:-77962498 Msa1216300:CDS
CTGATTCAGGTATCAAAGAG+TGG 0.604569 8_1:-77962209 Msa1216300:CDS
TAGTGAATCAACTTCTAACA+TGG 0.607061 8_1:+77959435 None:intergenic
TTGAACCTAATGCAGATCCA+AGG 0.611371 8_1:-77960161 Msa1216300:intron
GAATCAACTTCTAACATGGA+AGG 0.613204 8_1:+77959439 None:intergenic
GATTGAATATAATTTGAACC+CGG 0.614480 8_1:+77959321 None:intergenic
TACTAGCTTTAATATCTCGG+TGG 0.615379 8_1:+77960040 None:intergenic
AAAGAAAATAAGGTTGGAGA+GGG 0.616933 8_1:-77960962 Msa1216300:CDS
AAATACCATTCCCAAGAGAA+CGG 0.617414 8_1:+77961255 None:intergenic
TACATTTGTCTCACACAACA+GGG 0.619043 8_1:-77962977 Msa1216300:CDS
AATCATGAGATGCATGCAAG+TGG 0.623345 8_1:-77959497 Msa1216300:CDS
TCACCTTCCATTGTAATACC+AGG 0.626053 8_1:+77962075 None:intergenic
AGACTTGCCAAATCAGGCGA+AGG 0.635709 8_1:-77962123 Msa1216300:CDS
ATCTGGTCCTGGTATTACAA+TGG 0.636271 8_1:-77962082 Msa1216300:CDS
ATGTTGTATCATCCAATGAA+GGG 0.644026 8_1:+77959530 None:intergenic
TTTCAAGGCATAGACCTTTG+GGG 0.645803 8_1:-77962516 Msa1216300:CDS
TAAGAGGTGTGTGAAAAGTG+TGG 0.668814 8_1:+77962773 None:intergenic
GACGCGTGAATATCATTGAG+GGG 0.675191 8_1:-77960113 Msa1216300:CDS
ATTCAGGTATCAAAGAGTGG+AGG 0.684534 8_1:-77962206 Msa1216300:CDS
GCTTTGGTAAGACTCCCCAA+AGG 0.719695 8_1:+77962502 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAAATAAACTTAATAG+GGG + chr8_1:77962002-77962021 None:intergenic 10.0%
!! AAATTTCATGCAAATAAAAA+CGG - chr8_1:77961401-77961420 Msa1216300:intron 15.0%
!!! AATGATCTAAACTTTTATTT+GGG + chr8_1:77961953-77961972 None:intergenic 15.0%
!!! AAATGATCTAAACTTTTATT+TGG + chr8_1:77961954-77961973 None:intergenic 15.0%
!! TAAAAATGAAATGTATATTC+TGG + chr8_1:77962088-77962107 None:intergenic 15.0%
!!! TTCATACTATATATTTTGTA+AGG - chr8_1:77962694-77962713 Msa1216300:CDS 15.0%
!! ACATTGTATTGTATTGTTTA+AGG + chr8_1:77959368-77959387 None:intergenic 20.0%
!!! ATTTTGAAGTTTTACTGTAT+TGG + chr8_1:77959622-77959641 None:intergenic 20.0%
!!! AAAAGTTACATTAGAAGTTT+TGG - chr8_1:77960257-77960276 Msa1216300:intron 20.0%
!!! TTCGGTGTAATATTTTAAAT+TGG - chr8_1:77960601-77960620 Msa1216300:intron 20.0%
!!! TTTTCTATTAATCAAGCTTA+GGG + chr8_1:77960662-77960681 None:intergenic 20.0%
!!! TTTTTCTATTAATCAAGCTT+AGG + chr8_1:77960663-77960682 None:intergenic 20.0%
!!! TAACATCTAAAATTTGACTA+GGG + chr8_1:77960816-77960835 None:intergenic 20.0%
!!! TTAACATCTAAAATTTGACT+AGG + chr8_1:77960817-77960836 None:intergenic 20.0%
!! ACCTAGATATAAAGAATAAT+TGG - chr8_1:77960870-77960889 Msa1216300:intron 20.0%
!! TTACTTCTCAAAAGAAAATA+AGG - chr8_1:77961318-77961337 Msa1216300:CDS 20.0%
!!! TTATGATTTTGGTTTTTTCA+GGG - chr8_1:77961750-77961769 Msa1216300:intron 20.0%
!!! TGTTAATTTAGTTAGACTTT+TGG - chr8_1:77961881-77961900 Msa1216300:CDS 20.0%
!!! GTTAATTTAGTTAGACTTTT+GGG - chr8_1:77961882-77961901 Msa1216300:CDS 20.0%
!! AAACTATAAACATCATACTT+GGG + chr8_1:77962507-77962526 None:intergenic 20.0%
!! AAAACTATAAACATCATACT+TGG + chr8_1:77962508-77962527 None:intergenic 20.0%
!!! AAGTATGATGTTTATAGTTT+TGG - chr8_1:77962507-77962526 Msa1216300:CDS 20.0%
!!! TATATATTTTGTAAGGCATA+TGG - chr8_1:77962701-77962720 Msa1216300:CDS 20.0%
!!! ATATATTTTGTAAGGCATAT+GGG - chr8_1:77962702-77962721 Msa1216300:CDS 20.0%
!!! TTTTACTGTATTGGTAAAAG+TGG + chr8_1:77959613-77959632 None:intergenic 25.0%
!! ATGATTTTCTATGAGAAGAT+TGG + chr8_1:77959716-77959735 None:intergenic 25.0%
!!! TAAAAAACCAGAGTTAGTTT+TGG - chr8_1:77959887-77959906 Msa1216300:intron 25.0%
!!! ACTTTTGCATTGATTCAAAA+GGG + chr8_1:77959956-77959975 None:intergenic 25.0%
!!! TACTTTTGCATTGATTCAAA+AGG + chr8_1:77959957-77959976 None:intergenic 25.0%
!!! TGAATCAATGCAAAAGTATT+TGG - chr8_1:77959959-77959978 Msa1216300:intron 25.0%
!!! AATGCAAAAGTATTTGGATT+GGG - chr8_1:77959965-77959984 Msa1216300:intron 25.0%
! TCTTCTAACAAACTTGTAAT+TGG - chr8_1:77960119-77960138 Msa1216300:CDS 25.0%
! ATATTATAACGAGACATTTG+TGG - chr8_1:77960295-77960314 Msa1216300:intron 25.0%
! TGTGGAAGTTATTAAAGAAA+AGG - chr8_1:77960361-77960380 Msa1216300:intron 25.0%
! GTTTCTTATGCAAAGAAAAA+TGG - chr8_1:77960383-77960402 Msa1216300:intron 25.0%
!! CTGAAATGCTAAAGATATTT+TGG - chr8_1:77960546-77960565 Msa1216300:intron 25.0%
! ATAGTTACAACTTACAAGTA+AGG - chr8_1:77960578-77960597 Msa1216300:intron 25.0%
! TTATATCTAGGTCAAAAACA+TGG + chr8_1:77960862-77960881 None:intergenic 25.0%
! GCCAATTATTCTTTATATCT+AGG + chr8_1:77960874-77960893 None:intergenic 25.0%
! ATATAAAGAATAATTGGCTG+AGG - chr8_1:77960876-77960895 Msa1216300:intron 25.0%
! TTATATCTTCATTACCTTTG+TGG + chr8_1:77961072-77961091 None:intergenic 25.0%
!! TATTCAATTTTATCGCTCTA+GGG + chr8_1:77961105-77961124 None:intergenic 25.0%
!! TTATTCAATTTTATCGCTCT+AGG + chr8_1:77961106-77961125 None:intergenic 25.0%
! TTCTCAAAAGAAAATAAGGT+TGG - chr8_1:77961322-77961341 Msa1216300:CDS 25.0%
! AGCAAAATTGACAATTATTG+TGG - chr8_1:77961444-77961463 Msa1216300:intron 25.0%
!!! ATTGTGGTAACTTTTTTTAG+AGG - chr8_1:77961460-77961479 Msa1216300:intron 25.0%
! AGTTGCATACTTGATATTTA+TGG + chr8_1:77961669-77961688 None:intergenic 25.0%
!! TGATGACAATGTTATGATTT+TGG - chr8_1:77961739-77961758 Msa1216300:intron 25.0%
!!! GTTATGATTTTGGTTTTTTC+AGG - chr8_1:77961749-77961768 Msa1216300:intron 25.0%
!! AGTTTAGATCATTTTCTCAT+TGG - chr8_1:77961960-77961979 Msa1216300:CDS 25.0%
!!! CATTACTAGCTTTAATATCT+CGG + chr8_1:77962256-77962275 None:intergenic 25.0%
!! AATCCTAAGATATCAGATTT+TGG - chr8_1:77962296-77962315 Msa1216300:CDS 25.0%
! ATACCAAAATCTGATATCTT+AGG + chr8_1:77962302-77962321 None:intergenic 25.0%
!!! TAAGATATCAGATTTTGGTA+TGG - chr8_1:77962301-77962320 Msa1216300:CDS 25.0%
!! GCTTACATATATTTTCATGT+GGG + chr8_1:77962584-77962603 None:intergenic 25.0%
!! AGCTTACATATATTTTCATG+TGG + chr8_1:77962585-77962604 None:intergenic 25.0%
! TTCATGTTTGTTCATTGAAA+AGG + chr8_1:77962924-77962943 None:intergenic 25.0%
! AACAAACATGAAGATGATAA+GGG - chr8_1:77962932-77962951 Msa1216300:CDS 25.0%
! GATTGAATATAATTTGAACC+CGG + chr8_1:77962972-77962991 None:intergenic 25.0%
AAAGCTGGTTATTACTATTC+CGG - chr8_1:77959465-77959484 Msa1216300:CDS 30.0%
! TAAAAGCAAAAGCACATAAG+AGG + chr8_1:77959536-77959555 None:intergenic 30.0%
CATCTTTATAAACTCTTCTG+AGG - chr8_1:77959575-77959594 Msa1216300:intron 30.0%
GATAAAAGAGTTGTAACAGA+TGG + chr8_1:77959645-77959664 None:intergenic 30.0%
! ACTCTTTTATCAATCTACAC+CGG - chr8_1:77959654-77959673 Msa1216300:intron 30.0%
! AAATGAAGAATTTTCTCCTC+CGG + chr8_1:77959676-77959695 None:intergenic 30.0%
!!! ATATTTTCTTGCTGTTTGGA+TGG + chr8_1:77959751-77959770 None:intergenic 30.0%
ATCCAAACAGCAAGAAAATA+TGG - chr8_1:77959750-77959769 Msa1216300:intron 30.0%
TCCAAACAGCAAGAAAATAT+GGG - chr8_1:77959751-77959770 Msa1216300:intron 30.0%
TGATTCAAAAGGGTAACTTA+AGG + chr8_1:77959946-77959965 None:intergenic 30.0%
!! CAATGCAAAAGTATTTGGAT+TGG - chr8_1:77959964-77959983 Msa1216300:intron 30.0%
TGATTGCTATCTTCCTAAAA+AGG - chr8_1:77960004-77960023 Msa1216300:CDS 30.0%
ATACAAAGCTGCATGAAAAT+TGG + chr8_1:77960039-77960058 None:intergenic 30.0%
!! AATTTTCATGCAGCTTTGTA+TGG - chr8_1:77960038-77960057 Msa1216300:CDS 30.0%
TATTACAATGGAAGGTGATA+TGG - chr8_1:77960220-77960239 Msa1216300:intron 30.0%
ATTACAATGGAAGGTGATAT+GGG - chr8_1:77960221-77960240 Msa1216300:intron 30.0%
!! TACATTAGAAGTTTTGGTGA+TGG - chr8_1:77960263-77960282 Msa1216300:intron 30.0%
!!! TTGGGTTAATTTTGATGATG+TGG - chr8_1:77960343-77960362 Msa1216300:intron 30.0%
!! GCAAAGAAAAATGGATTACT+TGG - chr8_1:77960392-77960411 Msa1216300:intron 30.0%
! GTCAATTGTGTCATATTTTC+AGG + chr8_1:77960521-77960540 None:intergenic 30.0%
TACAACTTACAAGTAAGGTT+CGG - chr8_1:77960583-77960602 Msa1216300:intron 30.0%
TACCACAAAATGTTTGATCA+CGG + chr8_1:77960732-77960751 None:intergenic 30.0%
AAAATTTGACTAGGGATCAA+GGG + chr8_1:77960808-77960827 None:intergenic 30.0%
TAAAATTTGACTAGGGATCA+AGG + chr8_1:77960809-77960828 None:intergenic 30.0%
ATGAAGATCATCATAACAGA+AGG - chr8_1:77960975-77960994 Msa1216300:CDS 30.0%
TTTATTTATCTCACACCGTT+CGG - chr8_1:77961162-77961181 Msa1216300:intron 30.0%
AAAAGAAAATAAGGTTGGAG+AGG - chr8_1:77961327-77961346 Msa1216300:CDS 30.0%
AAAGAAAATAAGGTTGGAGA+GGG - chr8_1:77961328-77961347 Msa1216300:CDS 30.0%
AATTACTGTGATAACTGGTA+AGG - chr8_1:77961483-77961502 Msa1216300:intron 30.0%
ATGTAGCTAATAGAGTTATG+GGG + chr8_1:77961581-77961600 None:intergenic 30.0%
CATGTAGCTAATAGAGTTAT+GGG + chr8_1:77961582-77961601 None:intergenic 30.0%
TCATGTAGCTAATAGAGTTA+TGG + chr8_1:77961583-77961602 None:intergenic 30.0%
! TTTTCATCTGCATAAGATGT+AGG + chr8_1:77961633-77961652 None:intergenic 30.0%
GCAGATGAAAACAATGTTAA+TGG - chr8_1:77961642-77961661 Msa1216300:intron 30.0%
TCTACTATACTTCCAACTTA+TGG + chr8_1:77961710-77961729 None:intergenic 30.0%
GTCTAACTAAATTAACATGC+TGG + chr8_1:77961878-77961897 None:intergenic 30.0%
! TCTAGAAGAATTGATTTCCT+TGG + chr8_1:77962149-77962168 None:intergenic 30.0%
GGAAATCAATTCTTCTAGAT+TGG - chr8_1:77962150-77962169 Msa1216300:CDS 30.0%
AATCAATTCTTCTAGATTGG+AGG - chr8_1:77962153-77962172 Msa1216300:CDS 30.0%
! TAGTAAAATTGGAGTACTCT+TGG + chr8_1:77962226-77962245 None:intergenic 30.0%
!! TCGGTGGATTATAGTAAAAT+TGG + chr8_1:77962237-77962256 None:intergenic 30.0%
ATATCTTAGGATTCATCTCA+TGG + chr8_1:77962289-77962308 None:intergenic 30.0%
! TTTGGTATGGCTAGAATTTT+CGG - chr8_1:77962314-77962333 Msa1216300:CDS 30.0%
ATGTCTCTAATCACTTGTAA+CGG - chr8_1:77962429-77962448 Msa1216300:CDS 30.0%
ATGTTGTATCATCCAATGAA+GGG + chr8_1:77962763-77962782 None:intergenic 30.0%
TAGTGAATCAACTTCTAACA+TGG + chr8_1:77962858-77962877 None:intergenic 30.0%
GATTCACTAATCAAGAATGA+AGG - chr8_1:77962869-77962888 Msa1216300:CDS 30.0%
GAACAAACATGAAGATGATA+AGG - chr8_1:77962931-77962950 Msa1216300:CDS 30.0%
ATACATTTGTCTCACACAAC+AGG - chr8_1:77959312-77959331 Msa1216300:CDS 35.0%
TACATTTGTCTCACACAACA+GGG - chr8_1:77959313-77959332 Msa1216300:CDS 35.0%
TTGAGTAAGTTGTGAGAAAG+AGG + chr8_1:77959422-77959441 None:intergenic 35.0%
AGAAGCTGAAATTTCATTGC+CGG + chr8_1:77959487-77959506 None:intergenic 35.0%
!!! ACCCATATTTTCTTGCTGTT+TGG + chr8_1:77959755-77959774 None:intergenic 35.0%
GCAAGAAAATATGGGTTTCA+AGG - chr8_1:77959759-77959778 Msa1216300:intron 35.0%
GGGTAAAGAACTTGCAAATT+TGG - chr8_1:77959812-77959831 Msa1216300:intron 35.0%
AAATTTGGCAACCCTATTGA+AGG - chr8_1:77959827-77959846 Msa1216300:intron 35.0%
GATTCGCAATTCCTTCAATA+GGG + chr8_1:77959841-77959860 None:intergenic 35.0%
!! TTGGTGACATTGTCCTTTTT+AGG + chr8_1:77960020-77960039 None:intergenic 35.0%
TTTGTATGGTTCATCTGGTT+GGG - chr8_1:77960052-77960071 Msa1216300:CDS 35.0%
!! GTAATTGGTTTGCCTTATCA+TGG - chr8_1:77960134-77960153 Msa1216300:CDS 35.0%
ATTTCACTGTTGCATCTACT+TGG - chr8_1:77960324-77960343 Msa1216300:intron 35.0%
TTTCACTGTTGCATCTACTT+GGG - chr8_1:77960325-77960344 Msa1216300:intron 35.0%
AATTGTCATCATTCCCAACT+TGG + chr8_1:77960430-77960449 None:intergenic 35.0%
AAGTTGGGAATGATGACAAT+TGG - chr8_1:77960429-77960448 Msa1216300:intron 35.0%
AGTTGGGAATGATGACAATT+GGG - chr8_1:77960430-77960449 Msa1216300:intron 35.0%
AAATGTTTGATCACGGAGTT+CGG + chr8_1:77960725-77960744 None:intergenic 35.0%
TAAAGAATAATTGGCTGAGG+TGG - chr8_1:77960879-77960898 Msa1216300:intron 35.0%
! AAGGTTGCTGATAGTTGTTT+TGG - chr8_1:77960994-77961013 Msa1216300:CDS 35.0%
AAATACCATTCCCAAGAGAA+CGG + chr8_1:77961038-77961057 None:intergenic 35.0%
!!! TTTTTTTGCTACTGCCACAA+AGG - chr8_1:77961055-77961074 Msa1216300:CDS 35.0%
CAAGAATGATGTACAGATTG+AGG - chr8_1:77961206-77961225 Msa1216300:intron 35.0%
TTTCCATTGAGATCTTCTTC+AGG + chr8_1:77961247-77961266 None:intergenic 35.0%
GAAGAAGATCTCAATGGAAA+TGG - chr8_1:77961247-77961266 Msa1216300:CDS 35.0%
AGAGGAATTACTGTGATAAC+TGG - chr8_1:77961478-77961497 Msa1216300:intron 35.0%
TATACTTCCAACTTATGGCT+CGG + chr8_1:77961705-77961724 None:intergenic 35.0%
TTTCAGGGCAAATTACGTAA+TGG - chr8_1:77961765-77961784 Msa1216300:intron 35.0%
CTCTCAAAAACCTCAAAACA+AGG - chr8_1:77961810-77961829 Msa1216300:intron 35.0%
!!! TTTTGGGTTACTGCACAAAA+AGG - chr8_1:77961898-77961917 Msa1216300:CDS 35.0%
AGTACTCTTGGAGATAAAGA+AGG + chr8_1:77962214-77962233 None:intergenic 35.0%
!! TACTAGCTTTAATATCTCGG+TGG + chr8_1:77962253-77962272 None:intergenic 35.0%
CAAGTGATTAGAGACATTGA+GGG + chr8_1:77962426-77962445 None:intergenic 35.0%
ACAAGTGATTAGAGACATTG+AGG + chr8_1:77962427-77962446 None:intergenic 35.0%
CTTCTCTTGCAAATCATAAG+TGG - chr8_1:77962534-77962553 Msa1216300:CDS 35.0%
TGCAAATCATAAGTGGAAAC+AGG - chr8_1:77962541-77962560 Msa1216300:CDS 35.0%
AACAGGACTTCACGTTATTA+CGG - chr8_1:77962558-77962577 Msa1216300:CDS 35.0%
!!! GGAATTTTTTGACCCTTCAT+TGG - chr8_1:77962748-77962767 Msa1216300:CDS 35.0%
GATGTTGTATCATCCAATGA+AGG + chr8_1:77962764-77962783 None:intergenic 35.0%
TTTGTGTGTTCAAGAGAACT+CGG - chr8_1:77962820-77962839 Msa1216300:CDS 35.0%
GAATCAACTTCTAACATGGA+AGG + chr8_1:77962854-77962873 None:intergenic 35.0%
TGTTTGTTCATTGAAAAGGC+AGG + chr8_1:77962920-77962939 None:intergenic 35.0%
AAGGGAGATACATTTAACTC+CGG - chr8_1:77962950-77962969 Msa1216300:CDS 35.0%
ACACAACAGGGTTAAGGTTA+AGG - chr8_1:77959325-77959344 Msa1216300:CDS 40.0%
TGTGAGAAAGAGGAAGACAA+GGG + chr8_1:77959412-77959431 None:intergenic 40.0%
TTGTGAGAAAGAGGAAGACA+AGG + chr8_1:77959413-77959432 None:intergenic 40.0%
AATTGCAGACACCACTTCTT+GGG - chr8_1:77959440-77959459 Msa1216300:CDS 40.0%
GGCAATGAAATTTCAGCTTC+TGG - chr8_1:77959486-77959505 Msa1216300:CDS 40.0%
! TAAGAGGTGTGTGAAAAGTG+TGG + chr8_1:77959520-77959539 None:intergenic 40.0%
! CTTTTATCAATCTACACCGG+AGG - chr8_1:77959657-77959676 Msa1216300:intron 40.0%
GTTTCAAGGCATAGACCTTT+GGG - chr8_1:77959773-77959792 Msa1216300:intron 40.0%
TTTCAAGGCATAGACCTTTG+GGG - chr8_1:77959774-77959793 Msa1216300:intron 40.0%
CGATTCGCAATTCCTTCAAT+AGG + chr8_1:77959842-77959861 None:intergenic 40.0%
!!! ACCAGAGTTAGTTTTGGTGA+TGG - chr8_1:77959893-77959912 Msa1216300:intron 40.0%
CTTTGTATGGTTCATCTGGT+TGG - chr8_1:77960051-77960070 Msa1216300:CDS 40.0%
!! GGTTGGGAAAATACTGATTC+AGG - chr8_1:77960068-77960087 Msa1216300:CDS 40.0%
CTGATTCAGGTATCAAAGAG+TGG - chr8_1:77960081-77960100 Msa1216300:CDS 40.0%
ATTCAGGTATCAAAGAGTGG+AGG - chr8_1:77960084-77960103 Msa1216300:CDS 40.0%
ATCAAAGAGTGGAGGAAAAG+AGG - chr8_1:77960092-77960111 Msa1216300:CDS 40.0%
TGCCTTATCATGGATATGCA+TGG - chr8_1:77960144-77960163 Msa1216300:CDS 40.0%
CTCCATGCATATCCATGATA+AGG + chr8_1:77960149-77960168 None:intergenic 40.0%
ATCTGGTCCTGGTATTACAA+TGG - chr8_1:77960208-77960227 Msa1216300:intron 40.0%
TCACCTTCCATTGTAATACC+AGG + chr8_1:77960218-77960237 None:intergenic 40.0%
GTTACAGTGTGTTCCAAGTT+GGG - chr8_1:77960414-77960433 Msa1216300:intron 40.0%
TGACAATTGGGTCCTTTCAA+CGG - chr8_1:77960442-77960461 Msa1216300:intron 40.0%
CAAATTTACCTGCCGTTGAA+AGG + chr8_1:77960457-77960476 None:intergenic 40.0%
GAAAAATACTGCAGCTGCAT+TGG - chr8_1:77960677-77960696 Msa1216300:intron 40.0%
! CTCCGTGATCAAACATTTTG+TGG - chr8_1:77960727-77960746 Msa1216300:intron 40.0%
TTATCATTGTTCCTGCCGAA+CGG + chr8_1:77961180-77961199 None:intergenic 40.0%
GCAGTGTACAAGGTAACATT+TGG - chr8_1:77961361-77961380 Msa1216300:intron 40.0%
!!! CTCTTCAAGTCCTTGTTTTG+AGG + chr8_1:77961823-77961842 None:intergenic 40.0%
TTGAACCTAATGCAGATCCA+AGG - chr8_1:77962129-77962148 Msa1216300:CDS 40.0%
GATTTCCTTGGATCTGCATT+AGG + chr8_1:77962137-77962156 None:intergenic 40.0%
AGACGCGTGAATATCATTGA+GGG - chr8_1:77962176-77962195 Msa1216300:CDS 40.0%
ATCATTGAGGGGATTACTCA+AGG - chr8_1:77962188-77962207 Msa1216300:CDS 40.0%
AACTTGAAGCAAACACAAGC+AGG - chr8_1:77962345-77962364 Msa1216300:CDS 40.0%
! ACTTGTAACGGCTTTTGTAG+TGG - chr8_1:77962441-77962460 Msa1216300:CDS 40.0%
! CTTGTAACGGCTTTTGTAGT+GGG - chr8_1:77962442-77962461 Msa1216300:CDS 40.0%
! ATGCCTTTTCTGACATACTC+CGG + chr8_1:77962477-77962496 None:intergenic 40.0%
AATCATGAGATGCATGCAAG+TGG - chr8_1:77962793-77962812 Msa1216300:CDS 40.0%
! AAGAATGAAGGTACGCCAAT+TGG - chr8_1:77962881-77962900 Msa1216300:CDS 40.0%
ATTGAAAAGGCAGGCATGTT+GGG + chr8_1:77962911-77962930 None:intergenic 40.0%
AGGGAGATACATTTAACTCC+GGG - chr8_1:77962951-77962970 Msa1216300:CDS 40.0%
TGTCTCACACAACAGGGTTA+AGG - chr8_1:77959319-77959338 Msa1216300:CDS 45.0%
CAATTGCAGACACCACTTCT+TGG - chr8_1:77959439-77959458 Msa1216300:CDS 45.0%
ACCACTTCTTGGGTAAAAGC+TGG - chr8_1:77959450-77959469 Msa1216300:CDS 45.0%
! ACCAGCTTTTACCCAAGAAG+TGG + chr8_1:77959454-77959473 None:intergenic 45.0%
GGTTTCAAGGCATAGACCTT+TGG - chr8_1:77959772-77959791 Msa1216300:intron 45.0%
GCAAGTTCTTTACCCTGCTT+TGG + chr8_1:77959807-77959826 None:intergenic 45.0%
GCCATCACCAAAACTAACTC+TGG + chr8_1:77959897-77959916 None:intergenic 45.0%
! GCAGCTTTGTATGGTTCATC+TGG - chr8_1:77960047-77960066 Msa1216300:CDS 45.0%
GGTCCTGGTATTACAATGGA+AGG - chr8_1:77960212-77960231 Msa1216300:intron 45.0%
GGTTACAGTGTGTTCCAAGT+TGG - chr8_1:77960413-77960432 Msa1216300:intron 45.0%
TAGGGTGTACAGAGTACAAC+TGG + chr8_1:77960644-77960663 None:intergenic 45.0%
! AATACTGCAGCTGCATTGGT+CGG - chr8_1:77960681-77960700 Msa1216300:intron 45.0%
GTCGGAGAGGTAAGTACAAT+TGG - chr8_1:77960699-77960718 Msa1216300:intron 45.0%
TTTGACTGCTACCGTTCTCT+TGG - chr8_1:77961024-77961043 Msa1216300:CDS 45.0%
TTGACTGCTACCGTTCTCTT+GGG - chr8_1:77961025-77961044 Msa1216300:CDS 45.0%
GCACCTGAAGAAGATCTCAA+TGG - chr8_1:77961241-77961260 Msa1216300:CDS 45.0%
GAAAATAAGGTTGGAGAGGG+TGG - chr8_1:77961331-77961350 Msa1216300:intron 45.0%
!! TGGATTTGGTGCAGTGTACA+AGG - chr8_1:77961351-77961370 Msa1216300:intron 45.0%
GTTACATCCGAGCCATAAGT+TGG - chr8_1:77961695-77961714 Msa1216300:intron 45.0%
GAGACGCGTGAATATCATTG+AGG - chr8_1:77962175-77962194 Msa1216300:CDS 45.0%
GACGCGTGAATATCATTGAG+GGG - chr8_1:77962177-77962196 Msa1216300:CDS 45.0%
!! TTGTAGTGGGTATGTACCTC+CGG - chr8_1:77962455-77962474 Msa1216300:CDS 45.0%
! TTTGTAAGGCATATGGGCTG+TGG - chr8_1:77962708-77962727 Msa1216300:CDS 45.0%
CATTGAAAAGGCAGGCATGT+TGG + chr8_1:77962912-77962931 None:intergenic 45.0%
!! TAAAATTGAATAATAAATAA+AGG - chr8_1:77961113-77961132 Msa1216300:intron 5.0%
!!! TTTTTAAAATAAACTTAATA+GGG + chr8_1:77962003-77962022 None:intergenic 5.0%
!!! TTTTTTAAAATAAACTTAAT+AGG + chr8_1:77962004-77962023 None:intergenic 5.0%
!!! AGTTTATTTTAAAAAAAAAT+AGG - chr8_1:77962008-77962027 Msa1216300:CDS 5.0%
GCTTTGGTAAGACTCCCCAA+AGG + chr8_1:77959791-77959810 None:intergenic 50.0%
TTGGGGAGTCTTACCAAAGC+AGG - chr8_1:77959791-77959810 Msa1216300:intron 50.0%
TGGGGAGTCTTACCAAAGCA+GGG - chr8_1:77959792-77959811 Msa1216300:intron 50.0%
GCATGGAGACTTGCCAAATC+AGG - chr8_1:77960161-77960180 Msa1216300:intron 50.0%
AGACTTGCCAAATCAGGCGA+AGG - chr8_1:77960167-77960186 Msa1216300:intron 50.0%
AACACCACCTTCGCCTGATT+TGG + chr8_1:77960177-77960196 None:intergenic 50.0%
AAATCAGGCGAAGGTGGTGT+TGG - chr8_1:77960176-77960195 Msa1216300:intron 50.0%
GTAATACCAGGACCAGATGC+TGG + chr8_1:77960206-77960225 None:intergenic 50.0%
AATTGGGTCCTTTCAACGGC+AGG - chr8_1:77960446-77960465 Msa1216300:intron 50.0%
TGCTACCGTTCTCTTGGGAA+TGG - chr8_1:77961030-77961049 Msa1216300:CDS 50.0%
TTTATCTCACACCGTTCGGC+AGG - chr8_1:77961166-77961185 Msa1216300:intron 50.0%
! AAGGTTGGAGAGGGTGGATT+TGG - chr8_1:77961337-77961356 Msa1216300:intron 50.0%
AGCAAACACAAGCAGGATCG+TGG - chr8_1:77962352-77962371 Msa1216300:CDS 50.0%
GCAAACACAAGCAGGATCGT+GGG - chr8_1:77962353-77962372 Msa1216300:CDS 50.0%
! CCTTTTCTGACATACTCCGG+AGG + chr8_1:77962474-77962493 None:intergenic 50.0%
CCTCCGGAGTATGTCAGAAA+AGG - chr8_1:77962471-77962490 Msa1216300:CDS 50.0%
! TAAGGCATATGGGCTGTGGA+TGG - chr8_1:77962712-77962731 Msa1216300:CDS 50.0%
! CATATGGGCTGTGGATGGAA+GGG - chr8_1:77962717-77962736 Msa1216300:CDS 50.0%
!! GGCATGTTGGGAGTACCAAT+TGG + chr8_1:77962899-77962918 None:intergenic 50.0%
CTTGCCAAATCAGGCGAAGG+TGG - chr8_1:77960170-77960189 Msa1216300:intron 55.0%
! GGTGTTGGATCACCAGCATC+TGG - chr8_1:77960191-77960210 Msa1216300:intron 55.0%
! GCATATGGGCTGTGGATGGA+AGG - chr8_1:77962716-77962735 Msa1216300:CDS 55.0%
GGATCACCAGCATCTGGTCC+TGG - chr8_1:77960197-77960216 Msa1216300:intron 60.0%
! TGCAGCTGCATTGGTCGGAG+AGG - chr8_1:77960686-77960705 Msa1216300:intron 60.0%
GTGGATGGAAGGGAGAGGTG+TGG - chr8_1:77962727-77962746 Msa1216300:CDS 60.0%
GGGCTGTGGATGGAAGGGAG+AGG - chr8_1:77962722-77962741 Msa1216300:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 77959285 77963027 77959285 ID=Msa1216300;Name=Msa1216300
chr8_1 mRNA 77959285 77963027 77959285 ID=Msa1216300-mRNA-1;Parent=Msa1216300;Name=Msa1216300-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0.6|0.33|1|1|1|6|0|651
chr8_1 exon 77961845 77963027 77961845 ID=Msa1216300-mRNA-1:exon:26985;Parent=Msa1216300-mRNA-1
chr8_1 exon 77961236 77961349 77961236 ID=Msa1216300-mRNA-1:exon:26984;Parent=Msa1216300-mRNA-1
chr8_1 exon 77960940 77961124 77960940 ID=Msa1216300-mRNA-1:exon:26983;Parent=Msa1216300-mRNA-1
chr8_1 exon 77960532 77960541 77960532 ID=Msa1216300-mRNA-1:exon:26982;Parent=Msa1216300-mRNA-1
chr8_1 exon 77959995 77960168 77959995 ID=Msa1216300-mRNA-1:exon:26981;Parent=Msa1216300-mRNA-1
chr8_1 exon 77959285 77959574 77959285 ID=Msa1216300-mRNA-1:exon:26980;Parent=Msa1216300-mRNA-1
chr8_1 CDS 77961845 77963027 77961845 ID=Msa1216300-mRNA-1:cds;Parent=Msa1216300-mRNA-1
chr8_1 CDS 77961236 77961349 77961236 ID=Msa1216300-mRNA-1:cds;Parent=Msa1216300-mRNA-1
chr8_1 CDS 77960940 77961124 77960940 ID=Msa1216300-mRNA-1:cds;Parent=Msa1216300-mRNA-1
chr8_1 CDS 77960532 77960541 77960532 ID=Msa1216300-mRNA-1:cds;Parent=Msa1216300-mRNA-1
chr8_1 CDS 77959995 77960168 77959995 ID=Msa1216300-mRNA-1:cds;Parent=Msa1216300-mRNA-1
chr8_1 CDS 77959285 77959574 77959285 ID=Msa1216300-mRNA-1:cds;Parent=Msa1216300-mRNA-1
Gene Sequence

>Msa1216300

ATGGGAGTCTTGGCAACAAGTATACATATACATTTGTCTCACACAACAGGGTTAAGGTTAAGGAGTCTTGACTTGAGATTCCTTAAACAATACAATACAATGTTTTCAAAACATTTTGCTATCACCCTTGTCTTCCTCTTTCTCACAACTTACTCAATTGCAGACACCACTTCTTGGGTAAAAGCTGGTTATTACTATTCCGGCAATGAAATTTCAGCTTCTGGCATAAAATCCACACTTTTCACACACCTCTTATGTGCTTTTGCTTTTATAAACTACACAAACTACAACATCTTTATAAACTCTTCTGAGGAACACAAATTCTCCACTTTTACCAATACAGTAAAACTTCAAAATCCATCTGTTACAACTCTTTTATCAATCTACACCGGAGGAGAAAATTCTTCATTTTTTAACTCATTGATAAACCAATCTTCTCATAGAAAATCATTCATTGATTCTTCCATCCAAACAGCAAGAAAATATGGGTTTCAAGGCATAGACCTTTGGGGAGTCTTACCAAAGCAGGGTAAAGAACTTGCAAATTTGGCAACCCTATTGAAGGAATTGCGAATCGCGATAACTTCTGAAGCAAGAAACACTAAAAAACCAGAGTTAGTTTTGGTGATGGCATGTTATTATCTTAAAGCTTCAGATTCCTTAAGTTACCCTTTTGAATCAATGCAAAAGTATTTGGATTGGGTTCATTTTGTTGCATATGATTGCTATCTTCCTAAAAAGGACAATGTCACCAATTTTCATGCAGCTTTGTATGGTTCATCTGGTTGGGAAAATACTGATTCAGGTATCAAAGAGTGGAGGAAAAGAGGATTTTCTTCTAACAAACTTGTAATTGGTTTGCCTTATCATGGATATGCATGGAGACTTGCCAAATCAGGCGAAGGTGGTGTTGGATCACCAGCATCTGGTCCTGGTATTACAATGGAAGGTGATATGGGTTATAAGTTTATAAAAAGTTACATTAGAAGTTTTGGTGATGGAGTAGTTTCATATTATAACGAGACATTTGTGGTGAATTATTTCACTGTTGCATCTACTTGGGTTAATTTTGATGATGTGGAAGTTATTAAAGAAAAGGTTTCTTATGCAAAGAAAAATGGATTACTTGGTTACAGTGTGTTCCAAGTTGGGAATGATGACAATTGGGTCCTTTCAACGGCAGCTCATGAAGTAAATGAAGATCATCATAACAGAAGGTTGCTGATAGTTGTTTTGGTTACTGCTTTGACTGCTACCGTTCTCTTGGGAATGGTATTTTTTTGCTACTGCCACAAAGGAACAATGATAACTATTACAAGAATGATGTACAGATTGAGGATACATTTATCAGCACCTGAAGAAGATCTCAATGGAAATGGTTCTGATTTGATAGTATTTGATTATCTCACAATAAAACTTGCAACAAGTTACTTCTCAAAAGAAAATAAGGTTGGAGAGGGTGGATTTGGTGCAGTGTACAAGGGCAAATTACATCCAAGGAAATCAATTCTTCTAGATTGGAGGAGACGCGTGAATATCATTGAGGGGATTACTCAAGGCCTTCTTTATCTCCAAGAGTACTCCAATTTTACTATAATCCACCGAGATATTAAAGCTAGTAATGTTTTGTTAGACCATGAGATGAATCCTAAGATATCAGATTTTGGGAGAGGTGTGGAATTTTTTGACCCTTCATTGGATGATACAACATCAGCTTGTAAAATCATGAGATGCATGCAAGTGGCTCTTTTGTGTGTTCAAGAGAACTCGGCAGATAGACCTTCCATGTTAGAAGTTGATTCACTAATCAAGAATGAAGGTACGCCAATTGGTACTCCCAACATGCCTGCCTTTTCAATGAACAAACATGAAGATGATAAGGGAGATACATTTAACTCCGGGTTCAAATTATATTCAATCAATGATGTTACAATTTCTCAAATGTTGCCAAGATAA
Protein sequence

>Msa1216300

MGVLATSIHIHLSHTTGLRLRSLDLRFLKQYNTMFSKHFAITLVFLFLTTYSIADTTSWVKAGYYYSGNEISASGIKSTLFTHLLCAFAFINYTNYNIFINSSEEHKFSTFTNTVKLQNPSVTTLLSIYTGGENSSFFNSLINQSSHRKSFIDSSIQTARKYGFQGIDLWGVLPKQGKELANLATLLKELRIAITSEARNTKKPELVLVMACYYLKASDSLSYPFESMQKYLDWVHFVAYDCYLPKKDNVTNFHAALYGSSGWENTDSGIKEWRKRGFSSNKLVIGLPYHGYAWRLAKSGEGGVGSPASGPGITMEGDMGYKFIKSYIRSFGDGVVSYYNETFVVNYFTVASTWVNFDDVEVIKEKVSYAKKNGLLGYSVFQVGNDDNWVLSTAAHEVNEDHHNRRLLIVVLVTALTATVLLGMVFFCYCHKGTMITITRMMYRLRIHLSAPEEDLNGNGSDLIVFDYLTIKLATSYFSKENKVGEGGFGAVYKGKLHPRKSILLDWRRRVNIIEGITQGLLYLQEYSNFTIIHRDIKASNVLLDHEMNPKISDFGRGVEFFDPSLDDTTSACKIMRCMQVALLCVQENSADRPSMLEVDSLIKNEGTPIGTPNMPAFSMNKHEDDKGDTFNSGFKLYSINDVTISQMLPR*