Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220780 | XP_003609277.1 | 75.385 | 260 | 52 | 4 | 50 | 297 | 5 | 264 | 1.14e-132 | 387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220780 | sp|Q9LT81|C3H39_ARATH | 39.044 | 251 | 101 | 9 | 74 | 276 | 81 | 327 | 1.29e-38 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa1220780 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220780 | MtrunA17_Chr4g0063391 | 78.155 | 206 | 40 | 3 | 50 | 250 | 5 | 210 | 2.31e-112 | 324 |
| Msa1220780 | MtrunA17_Chr4g0063371 | 69.231 | 260 | 29 | 5 | 50 | 297 | 5 | 225 | 1.00e-107 | 312 |
| Msa1220780 | MtrunA17_Chr4g0063401 | 51.837 | 245 | 72 | 9 | 50 | 249 | 5 | 248 | 8.40e-67 | 209 |
| Msa1220780 | MtrunA17_Chr4g0063361 | 48.908 | 229 | 81 | 5 | 55 | 247 | 12 | 240 | 3.66e-65 | 204 |
| Msa1220780 | MtrunA17_Chr3g0098251 | 48.619 | 181 | 67 | 6 | 74 | 247 | 15 | 176 | 9.87e-44 | 148 |
| Msa1220780 | MtrunA17_Chr8g0360671 | 44.898 | 147 | 54 | 5 | 118 | 257 | 41 | 167 | 2.76e-29 | 109 |
| Msa1220780 | MtrunA17_Chr8g0366501 | 26.263 | 297 | 142 | 9 | 51 | 278 | 30 | 318 | 1.44e-21 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220780 | AT3G19360.1 | 39.044 | 251 | 101 | 9 | 74 | 276 | 81 | 327 | 1.31e-39 | 142 |
| Msa1220780 | AT3G19360.2 | 39.044 | 251 | 101 | 9 | 74 | 276 | 81 | 327 | 1.31e-39 | 142 |
Find 76 sgRNAs with CRISPR-Local
Find 593 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCATTGAAACTAATAATT+TGG | 0.147683 | 8_1:+84084280 | Msa1220780:CDS |
| CCAACTAGCTTCTGCGAATT+TGG | 0.173447 | 8_1:-84084065 | None:intergenic |
| CCAAGTGTACGCTTCTTCTT+AGG | 0.267354 | 8_1:-84076410 | None:intergenic |
| AGCCAGATCAATCGTATTTA+CGG | 0.289560 | 8_1:+84076443 | Msa1220780:CDS |
| AGCCAGATCAATCGAATTTA+CGG | 0.290260 | 8_1:+84085901 | Msa1220780:CDS |
| TCAATCGTATTTACGGTGAT+TGG | 0.347052 | 8_1:+84076450 | Msa1220780:CDS |
| CCAACTAAGAAGCGTATACT+TGG | 0.350951 | 8_1:+84085868 | Msa1220780:CDS |
| TTCCAAATTATTAGTTTCAA+TGG | 0.356757 | 8_1:-84084282 | None:intergenic |
| GAAGCACTCTCTTGATTTCA+AGG | 0.359778 | 8_1:-84084252 | None:intergenic |
| ATCGGCTGCAGCTGGAAAAT+CGG | 0.361010 | 8_1:+84084102 | Msa1220780:CDS |
| CGACTAAACTGTGTCGCAAT+TGG | 0.369653 | 8_1:+84084348 | Msa1220780:CDS |
| TGAACAACAATGACTTCAAA+AGG | 0.386314 | 8_1:+84083859 | Msa1220780:CDS |
| TGCTATGGCAACTGCAGCTT+CGG | 0.389652 | 8_1:-84085830 | None:intergenic |
| AAATCAGAGTTACAAGTTCC+TGG | 0.400098 | 8_1:+84085769 | Msa1220780:intron |
| AGATTTGGTGCTTGTAGAAA+CGG | 0.437088 | 8_1:+84083993 | Msa1220780:intron |
| AACTGCAGCATCAGCTTCAA+TGG | 0.437500 | 8_1:-84085797 | None:intergenic |
| AACTGCAGCTTCGGCTTCAA+TGG | 0.440184 | 8_1:-84085821 | None:intergenic |
| ACGGTGATTGGATTGATGAT+TGG | 0.443878 | 8_1:+84076462 | Msa1220780:CDS |
| CTGGTGCTCTTCCTTTGCTA+TGG | 0.445302 | 8_1:-84085845 | None:intergenic |
| CCAAGTATACGCTTCTTAGT+TGG | 0.448187 | 8_1:-84085868 | None:intergenic |
| TAACGATGATCGGCTGCAGC+TGG | 0.448905 | 8_1:+84084094 | Msa1220780:CDS |
| TCCTTGTTTATAGGCAGAGC+AGG | 0.451853 | 8_1:+84076347 | Msa1220780:intron |
| CCTAAGAAGAAGCGTACACT+TGG | 0.453400 | 8_1:+84076410 | Msa1220780:CDS |
| AGCAAGCAAGGGGCACTTAT+CGG | 0.455209 | 8_1:+84084324 | Msa1220780:CDS |
| CACCGTAAATTCGATTGATC+TGG | 0.457971 | 8_1:-84085903 | None:intergenic |
| TGTGCAAGCATTATTGCAAT+GGG | 0.460308 | 8_1:+84084159 | Msa1220780:CDS |
| TCGGCTGCAGCTGGAAAATC+GGG | 0.462737 | 8_1:+84084103 | Msa1220780:CDS |
| CTCTTTGCTCATGGTGAAGA+AGG | 0.463092 | 8_1:+84084407 | Msa1220780:CDS |
| CTGATCTGTTTGATTGAGGA+AGG | 0.475163 | 8_1:-84083932 | None:intergenic |
| AATATACACTTATCTCCATA+TGG | 0.477192 | 8_1:-84084191 | None:intergenic |
| GAGACAGGATATTGTTCCTA+TGG | 0.480467 | 8_1:+84084374 | Msa1220780:CDS |
| CACCGTAAATACGATTGATC+TGG | 0.481235 | 8_1:-84076445 | None:intergenic |
| ATGTACCCGACTTGTGGAAA+AGG | 0.484051 | 8_1:+84076376 | Msa1220780:CDS |
| CTCATGGAGCTGAAGAGATA+AGG | 0.489689 | 8_1:+84084033 | Msa1220780:CDS |
| AATAATTGCAACTTTGCTCA+TGG | 0.494959 | 8_1:+84084017 | Msa1220780:CDS |
| GATTGAGGAAGGGTCATCCT+TGG | 0.496966 | 8_1:-84083921 | None:intergenic |
| CTTGGAGGAGGGCATATCAA+TGG | 0.505795 | 8_1:-84083903 | None:intergenic |
| AGCTTCTGCGAATTTGGTGG+TGG | 0.508361 | 8_1:-84084059 | None:intergenic |
| GGAATGTGAACAAGCAAGCA+AGG | 0.508839 | 8_1:+84084312 | Msa1220780:CDS |
| CTCTTTGCTCATGATGAAGA+AGG | 0.508905 | 8_1:+84076018 | Msa1220780:CDS |
| CTAATAATTTGGAAGGCAGC+AGG | 0.521839 | 8_1:+84084291 | Msa1220780:CDS |
| GTATACGCTTCTTAGTTGGC+TGG | 0.524014 | 8_1:-84085864 | None:intergenic |
| TTCTGAATGTACCCGACTTG+TGG | 0.526232 | 8_1:+84076370 | Msa1220780:CDS |
| AGGAGGGCATATCAATGGAT+TGG | 0.527979 | 8_1:-84083898 | None:intergenic |
| CCAAATTCGCAGAAGCTAGT+TGG | 0.528628 | 8_1:+84084065 | Msa1220780:CDS |
| GGAAGGGTCATCCTTGGAGG+AGG | 0.531078 | 8_1:-84083915 | None:intergenic |
| TATTCATTCCTAAACTGTGC+AGG | 0.531321 | 8_1:-84084227 | None:intergenic |
| CTGTGCAAGCATTATTGCAA+TGG | 0.534714 | 8_1:+84084158 | Msa1220780:CDS |
| TGTCGCAATTGGAAGGAGAC+AGG | 0.541370 | 8_1:+84084359 | Msa1220780:CDS |
| ACTAGCTTCTGCGAATTTGG+TGG | 0.541605 | 8_1:-84084062 | None:intergenic |
| ATTGAAACTAATAATTTGGA+AGG | 0.547647 | 8_1:+84084284 | Msa1220780:CDS |
| GAACAACAATGACTTCAAAA+GGG | 0.550138 | 8_1:+84083860 | Msa1220780:CDS |
| AAAGAGACAGTTCTTTCCAT+AGG | 0.554060 | 8_1:-84084390 | None:intergenic |
| TGAGGAAGGGTCATCCTTGG+AGG | 0.556539 | 8_1:-84083918 | None:intergenic |
| CATTGATATGCCCTCCTCCA+AGG | 0.556864 | 8_1:+84083904 | Msa1220780:CDS |
| TTGGTCCGTGTAACGATGAT+CGG | 0.560743 | 8_1:+84084084 | Msa1220780:CDS |
| AACAATGACTTCAAAAGGGA+AGG | 0.561307 | 8_1:+84083864 | Msa1220780:CDS |
| TGGTCTGATCTGTTTGATTG+AGG | 0.566957 | 8_1:-84083936 | None:intergenic |
| AAGAACTGTCTCTTTGCTCA+TGG | 0.580294 | 8_1:+84084398 | Msa1220780:CDS |
| AATGGGGAGGAATGTCCATA+TGG | 0.583975 | 8_1:+84084176 | Msa1220780:CDS |
| TCAGCTTCAATGGCTCCACC+AGG | 0.589035 | 8_1:-84085787 | None:intergenic |
| TAAACTGTGTCGCAATTGGA+AGG | 0.596328 | 8_1:+84084352 | Msa1220780:CDS |
| GAATGTGAACAAGCAAGCAA+GGG | 0.597583 | 8_1:+84084313 | Msa1220780:CDS |
| AGCTGCAGTTGCCATAGCAA+AGG | 0.598992 | 8_1:+84085834 | Msa1220780:CDS |
| ACTGTGCAGGATCTTCATGA+AGG | 0.599205 | 8_1:-84084214 | None:intergenic |
| TGATCTGTTTGATTGAGGAA+GGG | 0.618914 | 8_1:-84083931 | None:intergenic |
| GAAGGGTCATCCTTGGAGGA+GGG | 0.622595 | 8_1:-84083914 | None:intergenic |
| CAACTAAGAAGCGTATACTT+GGG | 0.638379 | 8_1:+84085869 | Msa1220780:CDS |
| TTGTTCAATGAAGTGAATTG+CGG | 0.641834 | 8_1:-84083843 | None:intergenic |
| AATGTGAACAAGCAAGCAAG+GGG | 0.656040 | 8_1:+84084314 | Msa1220780:CDS |
| TTCAATGAAGTGAATTGCGG+CGG | 0.657596 | 8_1:-84083840 | None:intergenic |
| CTAAGAAGAAGCGTACACTT+GGG | 0.659038 | 8_1:+84076411 | Msa1220780:CDS |
| CAAGCATTATTGCAATGGGG+AGG | 0.662472 | 8_1:+84084163 | Msa1220780:CDS |
| TGCAGCCGATCATCGTTACA+CGG | 0.666217 | 8_1:-84084089 | None:intergenic |
| TCAGAGTTACAAGTTCCTGG+TGG | 0.718686 | 8_1:+84085772 | Msa1220780:intron |
| GTGCAAGCATTATTGCAATG+GGG | 0.746686 | 8_1:+84084160 | Msa1220780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTTTTACTGTTAAT+TGG | + | chr8_1:84076618-84076637 | Msa1220780:intron | 10.0% |
| !!! | CAATTTTTTTTTATAGTTTT+TGG | + | chr8_1:84078098-84078117 | Msa1220780:intron | 10.0% |
| !!! | CAAATTTTTTTTATAGTTTT+TGG | - | chr8_1:84078444-84078463 | None:intergenic | 10.0% |
| !!! | GTCAAATATTTAAAATAAAT+TGG | + | chr8_1:84081573-84081592 | Msa1220780:intron | 10.0% |
| !!! | TAATATGTTTTTTTTTTTTG+TGG | + | chr8_1:84081636-84081655 | Msa1220780:intron | 10.0% |
| !! | AATTATATGAGATATAATTA+TGG | - | chr8_1:84081885-84081904 | None:intergenic | 10.0% |
| !! | AATCATTACTATATTATTTA+TGG | - | chr8_1:84082445-84082464 | None:intergenic | 10.0% |
| !!! | GTTTTTTTTTTATTTGAAAA+AGG | + | chr8_1:84082537-84082556 | Msa1220780:intron | 10.0% |
| !! | ATATATTTATGTAAAATAAG+TGG | - | chr8_1:84082744-84082763 | None:intergenic | 10.0% |
| !!! | TTACATAAATATATGTATTT+TGG | + | chr8_1:84082750-84082769 | Msa1220780:intron | 10.0% |
| !! | ATTTCTATTGTTGAATAAAA+GGG | + | chr8_1:84076764-84076783 | Msa1220780:intron | 15.0% |
| !!! | TCATATATATACATGTTTTT+CGG | - | chr8_1:84077540-84077559 | None:intergenic | 15.0% |
| !! | ATAATACTAAAGTAATATTG+AGG | - | chr8_1:84077564-84077583 | None:intergenic | 15.0% |
| !! | AGATATAACAAAAAAATGAA+AGG | - | chr8_1:84077760-84077779 | None:intergenic | 15.0% |
| !!! | TTTCATTTTTTTGTTATATC+TGG | + | chr8_1:84077759-84077778 | Msa1220780:intron | 15.0% |
| !!! | TTTTCAAATGTGTAATATTT+TGG | + | chr8_1:84077852-84077871 | Msa1220780:intron | 15.0% |
| !!! | TTTAAGTTTGCAAATTTTTA+TGG | + | chr8_1:84078038-84078057 | Msa1220780:intron | 15.0% |
| !! | AACTATAAAAAAAAATTGCA+GGG | - | chr8_1:84078096-84078115 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAAATTGC+AGG | - | chr8_1:84078097-84078116 | None:intergenic | 15.0% |
| !! | AACTATAAAAAAAAATTTGC+AGG | + | chr8_1:84078384-84078403 | Msa1220780:intron | 15.0% |
| !! | ACTATAAAAAAAAATTTGCA+GGG | + | chr8_1:84078385-84078404 | Msa1220780:intron | 15.0% |
| !! | AAACTATAAAAAAAATTTGC+AGG | + | chr8_1:84078445-84078464 | Msa1220780:intron | 15.0% |
| !! | AACTATAAAAAAAATTTGCA+GGG | + | chr8_1:84078446-84078465 | Msa1220780:intron | 15.0% |
| !! | AACTATAAAAAAAAAATTGC+AGG | + | chr8_1:84078507-84078526 | Msa1220780:intron | 15.0% |
| !! | ACTATAAAAAAAAAATTGCA+GGG | + | chr8_1:84078508-84078527 | Msa1220780:intron | 15.0% |
| !!! | TAAATGATACTAATTTTAGA+AGG | - | chr8_1:84078859-84078878 | None:intergenic | 15.0% |
| !!! | ATATTTTGATTTGTTAATCA+AGG | + | chr8_1:84078968-84078987 | Msa1220780:intron | 15.0% |
| !! | TATAATAAATACATTCTTTC+AGG | + | chr8_1:84079217-84079236 | Msa1220780:intron | 15.0% |
| !! | ATATTTCTCAATTGAAAATA+TGG | + | chr8_1:84080266-84080285 | Msa1220780:intron | 15.0% |
| !! | TATTTCTCAATTGAAAATAT+GGG | + | chr8_1:84080267-84080286 | Msa1220780:intron | 15.0% |
| !!! | TTTTAAATATTTGACTGTTA+GGG | - | chr8_1:84081568-84081587 | None:intergenic | 15.0% |
| !!! | ATTTTAAATATTTGACTGTT+AGG | - | chr8_1:84081569-84081588 | None:intergenic | 15.0% |
| !! | TATTGAATTTCCAATAAATT+TGG | + | chr8_1:84081757-84081776 | Msa1220780:intron | 15.0% |
| !!! | TTATATTGATTTATGAGTAA+TGG | + | chr8_1:84082280-84082299 | Msa1220780:intron | 15.0% |
| !! | CTCTATATTTAAAAAAAAAG+AGG | - | chr8_1:84082568-84082587 | None:intergenic | 15.0% |
| !!! | CTCTTTTTTTTTAAATATAG+AGG | + | chr8_1:84082566-84082585 | Msa1220780:intron | 15.0% |
| !!! | AACACATTTTTTTTTTAACA+CGG | - | chr8_1:84083173-84083192 | None:intergenic | 15.0% |
| !! | AATATCAAAAAATCATACAA+AGG | + | chr8_1:84084129-84084148 | Msa1220780:CDS | 15.0% |
| !! | CAAATAATCAAAGTATATTA+TGG | - | chr8_1:84084436-84084455 | None:intergenic | 15.0% |
| !! | TATACTTTGATTATTTGTTT+CGG | + | chr8_1:84084439-84084458 | Msa1220780:intron | 15.0% |
| !!! | CAAGAGTTTTTTTAAATATA+AGG | - | chr8_1:84085617-84085636 | None:intergenic | 15.0% |
| !!! | CAATAACTCATTTTGATTAT+TGG | + | chr8_1:84076044-84076063 | Msa1220780:intron | 20.0% |
| !!! | TGTTAATTGGTAAAGTTTTA+TGG | + | chr8_1:84076631-84076650 | Msa1220780:intron | 20.0% |
| !! | CATTTCTATTGTTGAATAAA+AGG | + | chr8_1:84076763-84076782 | Msa1220780:intron | 20.0% |
| !!! | TTTTATGTCATGATACATTT+TGG | - | chr8_1:84077483-84077502 | None:intergenic | 20.0% |
| !!! | CATATATATACATGTTTTTC+GGG | - | chr8_1:84077539-84077558 | None:intergenic | 20.0% |
| !!! | ACACATTAATAGAAAGTTTT+AGG | + | chr8_1:84077590-84077609 | Msa1220780:intron | 20.0% |
| !! | GTGTGTATTTATTATAACAT+AGG | + | chr8_1:84077680-84077699 | Msa1220780:intron | 20.0% |
| !! | GTTTAATCTATTATTGACAA+TGG | + | chr8_1:84077797-84077816 | Msa1220780:intron | 20.0% |
| !!! | TATTTTGGTTTGATGATATT+AGG | + | chr8_1:84077867-84077886 | Msa1220780:intron | 20.0% |
| !!! | CTTGCAAAAATTTTTGTTTT+TGG | - | chr8_1:84078357-84078376 | None:intergenic | 20.0% |
| !!! | CAAAAACAAAAATTTTTGCA+AGG | + | chr8_1:84078355-84078374 | Msa1220780:intron | 20.0% |
| !! | ATAATAAGTAGGCTAAAATA+TGG | - | chr8_1:84078572-84078591 | None:intergenic | 20.0% |
| !! | TTTATTGTATTGAGACAAAT+AGG | + | chr8_1:84078698-84078717 | Msa1220780:intron | 20.0% |
| !!! | AAACTATTGTTATTTTGAGA+CGG | - | chr8_1:84078749-84078768 | None:intergenic | 20.0% |
| !! | CTGATATTCTTCTTTATATT+TGG | - | chr8_1:84079267-84079286 | None:intergenic | 20.0% |
| !!! | AACTAACTTGTAAATATGAA+AGG | - | chr8_1:84079342-84079361 | None:intergenic | 20.0% |
| !! | ACTAAATTTGTATCTACATT+GGG | + | chr8_1:84079485-84079504 | Msa1220780:intron | 20.0% |
| !! | ACAATGATTGTTGTAAATTT+AGG | + | chr8_1:84079549-84079568 | Msa1220780:intron | 20.0% |
| !! | ATTAATTATAAGGTTTGACT+TGG | - | chr8_1:84080207-84080226 | None:intergenic | 20.0% |
| !! | CAATTATTTGAAGATTTCAT+AGG | + | chr8_1:84080997-84081016 | Msa1220780:intron | 20.0% |
| !! | TGTTAAAGTGAACATATTAT+TGG | - | chr8_1:84081335-84081354 | None:intergenic | 20.0% |
| !!! | TATGTTTTTTTTTTTTGTGG+TGG | + | chr8_1:84081639-84081658 | Msa1220780:intron | 20.0% |
| !!! | ATTTTAATGTGACCTTTTAT+CGG | + | chr8_1:84081968-84081987 | Msa1220780:intron | 20.0% |
| !!! | TTTAATTTACATTAGAGAGA+CGG | - | chr8_1:84082134-84082153 | None:intergenic | 20.0% |
| !!! | TTCTTGATTGTTGTATTTTA+AGG | - | chr8_1:84082208-84082227 | None:intergenic | 20.0% |
| !!! | ATATATGACGAAAAGTATTT+GGG | - | chr8_1:84082347-84082366 | None:intergenic | 20.0% |
| !! | GTTATAGAGGATATAATATT+TGG | - | chr8_1:84082949-84082968 | None:intergenic | 20.0% |
| !! | ATGAACACATTAAATAAACA+CGG | - | chr8_1:84083028-84083047 | None:intergenic | 20.0% |
| !!! | TTAACATTTGTCTTGTTTTT+TGG | + | chr8_1:84083191-84083210 | Msa1220780:intron | 20.0% |
| !!! | TAACATTTGTCTTGTTTTTT+GGG | + | chr8_1:84083192-84083211 | Msa1220780:intron | 20.0% |
| !!! | GATTTAAGATCTGAAATTTT+TGG | - | chr8_1:84083554-84083573 | None:intergenic | 20.0% |
| !! | AACCATTGAAACTAATAATT+TGG | + | chr8_1:84084280-84084299 | Msa1220780:CDS | 20.0% |
| !!! | TTCCAAATTATTAGTTTCAA+TGG | - | chr8_1:84084285-84084304 | None:intergenic | 20.0% |
| !! | ATTGAAACTAATAATTTGGA+AGG | + | chr8_1:84084284-84084303 | Msa1220780:CDS | 20.0% |
| !!! | GTTTTGTACTAAATAAAGTT+TGG | + | chr8_1:84085073-84085092 | Msa1220780:intron | 20.0% |
| !!! | CTCATTTTGATTATTGGTTT+TGG | + | chr8_1:84076050-84076069 | Msa1220780:intron | 25.0% |
| !!! | TGTTTCATGTTTGATTTGAA+TGG | + | chr8_1:84076242-84076261 | Msa1220780:intron | 25.0% |
| !!! | AACAAAGAATTTTGGAAACA+TGG | + | chr8_1:84076539-84076558 | Msa1220780:intron | 25.0% |
| !!! | TTTTGTTTCTAATGCCTTTT+TGG | - | chr8_1:84076848-84076867 | None:intergenic | 25.0% |
| ! | TGAGTTTGGATACTAATATT+AGG | - | chr8_1:84076891-84076910 | None:intergenic | 25.0% |
| ! | AATATTCAAGTGTGATAGAT+TGG | - | chr8_1:84076966-84076985 | None:intergenic | 25.0% |
| ! | TACCACTAATTAATTCTCAA+AGG | - | chr8_1:84077001-84077020 | None:intergenic | 25.0% |
| ! | TTTGAGAATTAATTAGTGGT+AGG | + | chr8_1:84077000-84077019 | Msa1220780:intron | 25.0% |
| ! | TTGAGAATTAATTAGTGGTA+GGG | + | chr8_1:84077001-84077020 | Msa1220780:intron | 25.0% |
| !!! | AGAGGTTTTAAAAAAAATCC+AGG | - | chr8_1:84077073-84077092 | None:intergenic | 25.0% |
| !!! | TTTGTAGCTTTGAATACTTA+TGG | - | chr8_1:84077253-84077272 | None:intergenic | 25.0% |
| ! | TACACACACATATAGTAAAT+AGG | - | chr8_1:84077667-84077686 | None:intergenic | 25.0% |
| ! | ACACATTTGAAAAAGAAACT+TGG | - | chr8_1:84077845-84077864 | None:intergenic | 25.0% |
| ! | TACTAATTGGATTACACATT+AGG | - | chr8_1:84077966-84077985 | None:intergenic | 25.0% |
| !!! | TCCAAAAACAATTTTTTGCA+GGG | - | chr8_1:84078125-84078144 | None:intergenic | 25.0% |
| !!! | TTCCAAAAACAATTTTTTGC+AGG | - | chr8_1:84078126-84078145 | None:intergenic | 25.0% |
| ! | TGACAAATCATCACATAATT+GGG | + | chr8_1:84078317-84078336 | Msa1220780:intron | 25.0% |
| ! | TTCATTGAAACATTAGTCAT+TGG | + | chr8_1:84078651-84078670 | Msa1220780:intron | 25.0% |
| ! | AGTTAATGAAGTAGCTAAAT+TGG | + | chr8_1:84078824-84078843 | Msa1220780:intron | 25.0% |
| ! | TAACAAATCAAAATATCCCT+TGG | - | chr8_1:84078964-84078983 | None:intergenic | 25.0% |
| !!! | TTTGATTTGTTAATCAAGGT+AGG | + | chr8_1:84078972-84078991 | Msa1220780:intron | 25.0% |
| ! | GAAAAGTAATGCCATATAAA+TGG | - | chr8_1:84079001-84079020 | None:intergenic | 25.0% |
| !!! | TTTACTTTTCAAATTGTTGC+AGG | + | chr8_1:84079058-84079077 | Msa1220780:intron | 25.0% |
| ! | TTATATCTGAACTTTACAGT+GGG | - | chr8_1:84079243-84079262 | None:intergenic | 25.0% |
| ! | ATTATATCTGAACTTTACAG+TGG | - | chr8_1:84079244-84079263 | None:intergenic | 25.0% |
| ! | TATAAAGAAGAATATCAGCA+TGG | + | chr8_1:84079269-84079288 | Msa1220780:intron | 25.0% |
| ! | CACTAAATTTGTATCTACAT+TGG | + | chr8_1:84079484-84079503 | Msa1220780:intron | 25.0% |
| ! | ATAATGAGAAAAATCAAGAG+AGG | + | chr8_1:84079627-84079646 | Msa1220780:intron | 25.0% |
| !! | AAACTTATCTGTCTTGATTT+TGG | + | chr8_1:84079658-84079677 | Msa1220780:intron | 25.0% |
| !! | ACTGACAAGAAAATATTTTC+AGG | + | chr8_1:84079878-84079897 | Msa1220780:intron | 25.0% |
| !! | CTCATTTTCAATGGTTTTTT+GGG | - | chr8_1:84079913-84079932 | None:intergenic | 25.0% |
| ! | CAAAAAACCATTGAAAATGA+GGG | + | chr8_1:84079912-84079931 | Msa1220780:intron | 25.0% |
| !! | ATTAGTATGCATTTTTCACT+TGG | - | chr8_1:84079968-84079987 | None:intergenic | 25.0% |
| !! | TACGTGAGTATTCATTTTAT+AGG | + | chr8_1:84079992-84080011 | Msa1220780:intron | 25.0% |
| !!! | CATTTTATTGGCTCATTATA+AGG | - | chr8_1:84080052-84080071 | None:intergenic | 25.0% |
| !! | ATGCATAACGTTCATTTTAT+TGG | - | chr8_1:84080064-84080083 | None:intergenic | 25.0% |
| ! | ATACATTCTCTTATATGTTG+AGG | + | chr8_1:84080349-84080368 | Msa1220780:intron | 25.0% |
| ! | TTACTCAGAAAATAACTGAT+GGG | - | chr8_1:84080446-84080465 | None:intergenic | 25.0% |
| ! | AACTTTCTGAATAATCTCTT+CGG | - | chr8_1:84080519-84080538 | None:intergenic | 25.0% |
| ! | TTAATGTTGTTGAATCTTGT+TGG | + | chr8_1:84080740-84080759 | Msa1220780:intron | 25.0% |
| ! | AAGCACAAAAGATATTGAAA+TGG | + | chr8_1:84080870-84080889 | Msa1220780:intron | 25.0% |
| !! | TATCCATTTTATGTGTGAAA+AGG | + | chr8_1:84080894-84080913 | Msa1220780:intron | 25.0% |
| ! | AAATCTTCAAATAATTGCAG+TGG | - | chr8_1:84080994-84081013 | None:intergenic | 25.0% |
| ! | TACAACATATTGAAACAATC+AGG | + | chr8_1:84081169-84081188 | Msa1220780:intron | 25.0% |
| ! | ACAACATATTGAAACAATCA+GGG | + | chr8_1:84081170-84081189 | Msa1220780:intron | 25.0% |
| ! | AAAGATCAAAAAGTTCAAAG+AGG | - | chr8_1:84081493-84081512 | None:intergenic | 25.0% |
| ! | ATGATAAGTGCCAAATTTAT+TGG | - | chr8_1:84081770-84081789 | None:intergenic | 25.0% |
| ! | GTTACGTAGAGAAATAAAAT+GGG | - | chr8_1:84081796-84081815 | None:intergenic | 25.0% |
| ! | TATCAAACTACAAACACAAA+TGG | + | chr8_1:84082318-84082337 | Msa1220780:intron | 25.0% |
| ! | ATCAAACTACAAACACAAAT+GGG | + | chr8_1:84082319-84082338 | Msa1220780:intron | 25.0% |
| !!! | TATATGACGAAAAGTATTTG+GGG | - | chr8_1:84082346-84082365 | None:intergenic | 25.0% |
| !!! | CATATATGACGAAAAGTATT+TGG | - | chr8_1:84082348-84082367 | None:intergenic | 25.0% |
| !! | CAAATACTTTTCGTCATATA+TGG | + | chr8_1:84082346-84082365 | Msa1220780:intron | 25.0% |
| ! | TTCGTTAACAATAAAAGGAT+GGG | - | chr8_1:84082811-84082830 | None:intergenic | 25.0% |
| ! | TTTCGTTAACAATAAAAGGA+TGG | - | chr8_1:84082812-84082831 | None:intergenic | 25.0% |
| ! | TTCGTTTCGTTAACAATAAA+AGG | - | chr8_1:84082816-84082835 | None:intergenic | 25.0% |
| ! | GAAATTTATGTTTCCAAAAG+CGG | + | chr8_1:84082854-84082873 | Msa1220780:intron | 25.0% |
| ! | GGTTAATTTAGTTGTAAAAC+TGG | + | chr8_1:84082897-84082916 | Msa1220780:intron | 25.0% |
| !!! | GAGACTTTTTTTTGTTATAG+AGG | - | chr8_1:84082962-84082981 | None:intergenic | 25.0% |
| ! | ACACGGATAATATTATTGAT+TGG | - | chr8_1:84083156-84083175 | None:intergenic | 25.0% |
| ! | ATTTGTACTAAGTTCAGATT+TGG | + | chr8_1:84083978-84083997 | Msa1220780:intron | 25.0% |
| ! | AATATACACTTATCTCCATA+TGG | - | chr8_1:84084194-84084213 | None:intergenic | 25.0% |
| ! | TGATCATTAATCATACATGA+AGG | - | chr8_1:84084765-84084784 | None:intergenic | 25.0% |
| ! | TATCAAATTTCTGCCATAAA+TGG | + | chr8_1:84084799-84084818 | Msa1220780:intron | 25.0% |
| ! | ATCAAATTTCTGCCATAAAT+GGG | + | chr8_1:84084800-84084819 | Msa1220780:intron | 25.0% |
| ! | AAAAATCTGGCATATAAACA+TGG | - | chr8_1:84084905-84084924 | None:intergenic | 25.0% |
| ! | AAGTTATCATAAGCAAAATG+CGG | - | chr8_1:84084944-84084963 | None:intergenic | 25.0% |
| ! | TTGTACTAAATAAAGTTTGG+TGG | + | chr8_1:84085076-84085095 | Msa1220780:intron | 25.0% |
| ! | TGTACTAAATAAAGTTTGGT+GGG | + | chr8_1:84085077-84085096 | Msa1220780:intron | 25.0% |
| ! | TATAAAAATTCCTGACAATG+CGG | - | chr8_1:84085182-84085201 | None:intergenic | 25.0% |
| ! | ATGATCCATTAGAATAAAGA+GGG | - | chr8_1:84085247-84085266 | None:intergenic | 25.0% |
| ! | AATGATCCATTAGAATAAAG+AGG | - | chr8_1:84085248-84085267 | None:intergenic | 25.0% |
| ! | AATGGATCATTACTATTGTA+TGG | + | chr8_1:84085257-84085276 | Msa1220780:intron | 25.0% |
| ! | TCTTAACAAATGTAAAACTG+TGG | - | chr8_1:84085307-84085326 | None:intergenic | 25.0% |
| !!! | TACTAGAATTTGTTGTAGTT+TGG | + | chr8_1:84085327-84085346 | Msa1220780:intron | 25.0% |
| !! | ACTTTAAGAAGAAACAAAGT+TGG | - | chr8_1:84085402-84085421 | None:intergenic | 25.0% |
| !! | TGACATGAACAATAATTTTG+AGG | + | chr8_1:84085454-84085473 | Msa1220780:intron | 25.0% |
| ! | ATGATTCCATCCTTGTTTAT+AGG | + | chr8_1:84076338-84076357 | Msa1220780:intron | 30.0% |
| ! | TCTGCGTTAACAAAGAATTT+TGG | + | chr8_1:84076531-84076550 | Msa1220780:intron | 30.0% |
| !! | AATTTTGGAAACATGGTCAT+TGG | + | chr8_1:84076546-84076565 | Msa1220780:intron | 30.0% |
| !!! | AGGTTTTTAGTGTTTTGTGT+GGG | - | chr8_1:84076797-84076816 | None:intergenic | 30.0% |
| ACAAAACACTAAAAACCTCT+AGG | + | chr8_1:84076799-84076818 | Msa1220780:intron | 30.0% | |
| ! | TGCGAAATACAATTTGAGTT+TGG | - | chr8_1:84076905-84076924 | None:intergenic | 30.0% |
| ! | GTCCTTTGAGAATTAATTAG+TGG | + | chr8_1:84076996-84077015 | Msa1220780:intron | 30.0% |
| ! | TTCATGGATTGAAAATTGCT+TGG | - | chr8_1:84077099-84077118 | None:intergenic | 30.0% |
| AAAGCTACAAAACCATTATG+AGG | + | chr8_1:84077262-84077281 | Msa1220780:intron | 30.0% | |
| GCTCTTAATCTTATGATACA+AGG | + | chr8_1:84077376-84077395 | Msa1220780:intron | 30.0% | |
| !! | ACATTTTGGTGTGTTATGTT+TGG | - | chr8_1:84077469-84077488 | None:intergenic | 30.0% |
| GTCAATCAAGAAAATATAGC+AGG | + | chr8_1:84077631-84077650 | Msa1220780:intron | 30.0% | |
| TAGATTAAACATCTACTTCG+TGG | - | chr8_1:84077787-84077806 | None:intergenic | 30.0% | |
| GGCATATCGAATTTAATGTA+TGG | - | chr8_1:84077945-84077964 | None:intergenic | 30.0% | |
| ! | TCCCTGCAAAAAATTGTTTT+TGG | + | chr8_1:84078121-84078140 | Msa1220780:intron | 30.0% |
| GTGACAAATCATCACATAAT+TGG | + | chr8_1:84078316-84078335 | Msa1220780:intron | 30.0% | |
| GACAAATCATCACATAATTG+GGG | + | chr8_1:84078318-84078337 | Msa1220780:intron | 30.0% | |
| !!! | AAAACTGGCTTATTTTTGCA+GGG | + | chr8_1:84078417-84078436 | Msa1220780:intron | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+GGG | + | chr8_1:84078478-84078497 | Msa1220780:intron | 30.0% |
| AGTAGGCTAAAATATGGTAT+TGG | - | chr8_1:84078566-84078585 | None:intergenic | 30.0% | |
| AAAGCAACACATAAAGTAAG+TGG | - | chr8_1:84078601-84078620 | None:intergenic | 30.0% | |
| !! | TCATATACGAACATTGACTT+TGG | + | chr8_1:84078887-84078906 | Msa1220780:intron | 30.0% |
| !! | TCTAATAGACCCTTTTAAAG+AGG | + | chr8_1:84079024-84079043 | Msa1220780:intron | 30.0% |
| GGTGTGTCTGATAAAATTAA+CGG | - | chr8_1:84079368-84079387 | None:intergenic | 30.0% | |
| ! | GATGAACTAGTTTAAACTTG+TGG | - | chr8_1:84079389-84079408 | None:intergenic | 30.0% |
| CTAACTTGAGTCTCAATTAA+CGG | - | chr8_1:84079411-84079430 | None:intergenic | 30.0% | |
| AAAAATCAAGAGAGGTTTCA+AGG | + | chr8_1:84079635-84079654 | Msa1220780:intron | 30.0% | |
| AAAAACGAACAAACGATGAA+AGG | + | chr8_1:84079750-84079769 | Msa1220780:intron | 30.0% | |
| ! | CCTCATTTTCAATGGTTTTT+TGG | - | chr8_1:84079914-84079933 | None:intergenic | 30.0% |
| CCAAAAAACCATTGAAAATG+AGG | + | chr8_1:84079911-84079930 | Msa1220780:intron | 30.0% | |
| TAAAATGAATACTCACGTAC+TGG | - | chr8_1:84079991-84080010 | None:intergenic | 30.0% | |
| TCATGAGATATCAAAGCAAA+AGG | + | chr8_1:84080144-84080163 | Msa1220780:intron | 30.0% | |
| CATGAGATATCAAAGCAAAA+GGG | + | chr8_1:84080145-84080164 | Msa1220780:intron | 30.0% | |
| ATGAGATATCAAAGCAAAAG+GGG | + | chr8_1:84080146-84080165 | Msa1220780:intron | 30.0% | |
| TACTACTTCATCTATCACAA+TGG | + | chr8_1:84080382-84080401 | Msa1220780:intron | 30.0% | |
| TACTCAGAAAATAACTGATG+GGG | - | chr8_1:84080445-84080464 | None:intergenic | 30.0% | |
| GTTACTCAGAAAATAACTGA+TGG | - | chr8_1:84080447-84080466 | None:intergenic | 30.0% | |
| !! | CTCTTCGGAATATTTTTGTT+GGG | - | chr8_1:84080504-84080523 | None:intergenic | 30.0% |
| !! | TCTCTTCGGAATATTTTTGT+TGG | - | chr8_1:84080505-84080524 | None:intergenic | 30.0% |
| !! | TATTCAGATGGATTGTGATA+GGG | - | chr8_1:84080613-84080632 | None:intergenic | 30.0% |
| !! | ATATTCAGATGGATTGTGAT+AGG | - | chr8_1:84080614-84080633 | None:intergenic | 30.0% |
| GTAAGACTTCAATATTCAGA+TGG | - | chr8_1:84080625-84080644 | None:intergenic | 30.0% | |
| ATGTGTACACATTTGTTTGA+CGG | - | chr8_1:84080695-84080714 | None:intergenic | 30.0% | |
| !! | CATTAATTATCAGAGTATCG+TGG | + | chr8_1:84080712-84080731 | Msa1220780:intron | 30.0% |
| TGATGTTAGATAGGATTATC+TGG | - | chr8_1:84080850-84080869 | None:intergenic | 30.0% | |
| TTTGTGCTTTGATGTTAGAT+AGG | - | chr8_1:84080859-84080878 | None:intergenic | 30.0% | |
| ! | CAACCTTTTCACACATAAAA+TGG | - | chr8_1:84080900-84080919 | None:intergenic | 30.0% |
| AGAAAAAATGATTCACTGCA+AGG | - | chr8_1:84081262-84081281 | None:intergenic | 30.0% | |
| TGCATTACAACATTATCTCT+GGG | - | chr8_1:84081308-84081327 | None:intergenic | 30.0% | |
| ATGCATTACAACATTATCTC+TGG | - | chr8_1:84081309-84081328 | None:intergenic | 30.0% | |
| TCAACACATAGAAAATGGAA+GGG | - | chr8_1:84081404-84081423 | None:intergenic | 30.0% | |
| ATCAACACATAGAAAATGGA+AGG | - | chr8_1:84081405-84081424 | None:intergenic | 30.0% | |
| GTGAATCAACACATAGAAAA+TGG | - | chr8_1:84081409-84081428 | None:intergenic | 30.0% | |
| AACAAAGAATTGATCGCTTT+GGG | - | chr8_1:84081463-84081482 | None:intergenic | 30.0% | |
| CTTTCAACCTACAAATCAAA+TGG | + | chr8_1:84081509-84081528 | Msa1220780:intron | 30.0% | |
| !! | CCTATTTCCATTTGATTTGT+AGG | - | chr8_1:84081519-84081538 | None:intergenic | 30.0% |
| CCTACAAATCAAATGGAAAT+AGG | + | chr8_1:84081516-84081535 | Msa1220780:intron | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | - | chr8_1:84081683-84081702 | None:intergenic | 30.0% | |
| CGTTACGTAGAGAAATAAAA+TGG | - | chr8_1:84081797-84081816 | None:intergenic | 30.0% | |
| TTATGGAGAGTTATTTGCAT+GGG | - | chr8_1:84081868-84081887 | None:intergenic | 30.0% | |
| ATTATGGAGAGTTATTTGCA+TGG | - | chr8_1:84081869-84081888 | None:intergenic | 30.0% | |
| AAATTGGTTATCCTTGTGTT+GGG | - | chr8_1:84082012-84082031 | None:intergenic | 30.0% | |
| TAAATTGGTTATCCTTGTGT+TGG | - | chr8_1:84082013-84082032 | None:intergenic | 30.0% | |
| !! | TTCTCACGTGCTTTTTAAAT+TGG | - | chr8_1:84082028-84082047 | None:intergenic | 30.0% |
| GCAAATCTTGTCATAGATAT+GGG | - | chr8_1:84082069-84082088 | None:intergenic | 30.0% | |
| AGCAAATCTTGTCATAGATA+TGG | - | chr8_1:84082070-84082089 | None:intergenic | 30.0% | |
| ACAATATCAAAATAGTAGCC+AGG | + | chr8_1:84082235-84082254 | Msa1220780:intron | 30.0% | |
| ATTTATGAGTAATGGCAAGT+TGG | + | chr8_1:84082288-84082307 | Msa1220780:intron | 30.0% | |
| TTATTGTCAAGAAGAAAGTG+TGG | - | chr8_1:84082473-84082492 | None:intergenic | 30.0% | |
| ! | CATTGTTCATGGAATTTTCA+CGG | + | chr8_1:84082506-84082525 | Msa1220780:intron | 30.0% |
| ! | GTTTACAACATACACTTTTG+TGG | - | chr8_1:84082650-84082669 | None:intergenic | 30.0% |
| TTGTATTTGTGTGGTTAATG+TGG | - | chr8_1:84082713-84082732 | None:intergenic | 30.0% | |
| GTTAATGCTTTGTATTTGTG+TGG | - | chr8_1:84082722-84082741 | None:intergenic | 30.0% | |
| TCGTTAACAATAAAAGGATG+GGG | - | chr8_1:84082810-84082829 | None:intergenic | 30.0% | |
| TTATTGTTAACGAAACGAAG+TGG | + | chr8_1:84082817-84082836 | Msa1220780:intron | 30.0% | |
| ! | GTTAACTACGTGCATTTTTA+TGG | + | chr8_1:84082876-84082895 | Msa1220780:intron | 30.0% |
| !!! | AACACGGTGAACATTTTTTT+AGG | - | chr8_1:84083012-84083031 | None:intergenic | 30.0% |
| AATGTTAGATAACTCTACTC+AGG | + | chr8_1:84083119-84083138 | Msa1220780:intron | 30.0% | |
| AGACAAGCATATATATAGTG+AGG | - | chr8_1:84083265-84083284 | None:intergenic | 30.0% | |
| ATATATGCTTGTCTCATTTC+TGG | + | chr8_1:84083271-84083290 | Msa1220780:intron | 30.0% | |
| !! | AGGTTTGGTTATTGTTTTCA+GGG | - | chr8_1:84083303-84083322 | None:intergenic | 30.0% |
| !! | AAGGTTTGGTTATTGTTTTC+AGG | - | chr8_1:84083304-84083323 | None:intergenic | 30.0% |
| TCAAATTTGCATGCACTATT+TGG | + | chr8_1:84083590-84083609 | Msa1220780:intron | 30.0% | |
| TCAAATTGCATGTCACTATT+TGG | + | chr8_1:84083697-84083716 | Msa1220780:intron | 30.0% | |
| AAATCCTTTGACAATAACCA+TGG | + | chr8_1:84083782-84083801 | Msa1220780:intron | 30.0% | |
| AATATCATATGGAAAAGCCA+TGG | - | chr8_1:84083802-84083821 | None:intergenic | 30.0% | |
| TTAGAGGTTGGAATATCATA+TGG | - | chr8_1:84083813-84083832 | None:intergenic | 30.0% | |
| TTGTTCAATGAAGTGAATTG+CGG | - | chr8_1:84083846-84083865 | None:intergenic | 30.0% | |
| TGAACAACAATGACTTCAAA+AGG | + | chr8_1:84083859-84083878 | Msa1220780:CDS | 30.0% | |
| GAACAACAATGACTTCAAAA+GGG | + | chr8_1:84083860-84083879 | Msa1220780:CDS | 30.0% | |
| ! | TTCGTGTTTTGTAGAAAATG+TGG | - | chr8_1:84083959-84083978 | None:intergenic | 30.0% |
| AATAATTGCAACTTTGCTCA+TGG | + | chr8_1:84084017-84084036 | Msa1220780:CDS | 30.0% | |
| TGCAAATTACAGTGTTTGAA+TGG | + | chr8_1:84076181-84076200 | Msa1220780:intron | 30.0% | |
| TGTGTATGATGTTTCATGTT+TGG | + | chr8_1:84076233-84076252 | Msa1220780:intron | 30.0% | |
| ! | TTTTTGCAAGATAAGGCAAT+GGG | - | chr8_1:84084671-84084690 | None:intergenic | 30.0% |
| ! | ATTTTTGCAAGATAAGGCAA+TGG | - | chr8_1:84084672-84084691 | None:intergenic | 30.0% |
| ! | AGGTACATTTTTGCAAGATA+AGG | - | chr8_1:84084678-84084697 | None:intergenic | 30.0% |
| ! | ATTTTCCATTCAGAACCTTA+GGG | - | chr8_1:84084701-84084720 | None:intergenic | 30.0% |
| ! | ATGATTCCATCCTTGTTTAT+AGG | + | chr8_1:84076338-84076357 | Msa1220780:intron | 30.0% |
| ! | ATGGCAGAAATTTGATAACA+AGG | - | chr8_1:84084796-84084815 | None:intergenic | 30.0% |
| ! | GTACTAAATAAAGTTTGGTG+GGG | + | chr8_1:84085078-84085097 | Msa1220780:intron | 30.0% |
| ! | ATGTAAGTGCTGTTAAATAG+CGG | - | chr8_1:84085125-84085144 | None:intergenic | 30.0% |
| TGATCCATTAGAATAAAGAG+GGG | - | chr8_1:84085246-84085265 | None:intergenic | 30.0% | |
| GATGAACATAATACAATAGC+TGG | - | chr8_1:84085375-84085394 | None:intergenic | 30.0% | |
| ATGTCAGACATCAAATTTGT+AGG | - | chr8_1:84085440-84085459 | None:intergenic | 30.0% | |
| TTAAAACAACTGCAACTGTT+TGG | + | chr8_1:84085701-84085720 | Msa1220780:intron | 30.0% | |
| AGGAGTCAGAATAATATACA+TGG | - | chr8_1:84085730-84085749 | None:intergenic | 30.0% | |
| ! | TTTTTGCAAGACAAGGCAAA+GGG | - | chr8_1:84076291-84076310 | None:intergenic | 35.0% |
| ! | ATTTTTGCAAGACAAGGCAA+AGG | - | chr8_1:84076292-84076311 | None:intergenic | 35.0% |
| ! | AGGAACATTTTTGCAAGACA+AGG | - | chr8_1:84076298-84076317 | None:intergenic | 35.0% |
| TGCAAAAATGTTCCTTCCTA+AGG | + | chr8_1:84076303-84076322 | Msa1220780:intron | 35.0% | |
| ! | TCATTTTCCATCAGAACCTT+AGG | - | chr8_1:84076322-84076341 | None:intergenic | 35.0% |
| AGCCAGATCAATCGTATTTA+CGG | + | chr8_1:84076443-84076462 | Msa1220780:CDS | 35.0% | |
| TCAATCGTATTTACGGTGAT+TGG | + | chr8_1:84076450-84076469 | Msa1220780:CDS | 35.0% | |
| TGTTTCCAGAGCATAACAAA+AGG | - | chr8_1:84076488-84076507 | None:intergenic | 35.0% | |
| GAAGAATGCTTATCCAAATG+AGG | - | chr8_1:84076513-84076532 | None:intergenic | 35.0% | |
| !!! | GGTTTTTAGTGTTTTGTGTG+GGG | - | chr8_1:84076796-84076815 | None:intergenic | 35.0% |
| !!! | GAGGTTTTTAGTGTTTTGTG+TGG | - | chr8_1:84076798-84076817 | None:intergenic | 35.0% |
| TCTAGGAAATATCATTTCCG+CGG | + | chr8_1:84076816-84076835 | Msa1220780:intron | 35.0% | |
| CATATTCAACTGCTTGACTA+CGG | + | chr8_1:84076929-84076948 | Msa1220780:intron | 35.0% | |
| ATATTCAACTGCTTGACTAC+GGG | + | chr8_1:84076930-84076949 | Msa1220780:intron | 35.0% | |
| AAGTGTGATAGATTGGATTC+AGG | - | chr8_1:84076959-84076978 | None:intergenic | 35.0% | |
| TTGAAAATTGCTTGGAGTAG+AGG | - | chr8_1:84077091-84077110 | None:intergenic | 35.0% | |
| !! | GAGCTTTGGGATATATTTCA+TGG | - | chr8_1:84077115-84077134 | None:intergenic | 35.0% |
| !! | AGGAATTCTTTGAGATGATG+CGG | - | chr8_1:84077194-84077213 | None:intergenic | 35.0% |
| !! | TTCTAGTTCTTCTGTTCGAT+GGG | - | chr8_1:84077293-84077312 | None:intergenic | 35.0% |
| AGACTGTCCAATTGAGTAAA+AGG | + | chr8_1:84077324-84077343 | Msa1220780:intron | 35.0% | |
| GACTGTCCAATTGAGTAAAA+GGG | + | chr8_1:84077325-84077344 | Msa1220780:intron | 35.0% | |
| ACTGTCCAATTGAGTAAAAG+GGG | + | chr8_1:84077326-84077345 | Msa1220780:intron | 35.0% | |
| ! | TGAATCCCCTTTTACTCAAT+TGG | - | chr8_1:84077334-84077353 | None:intergenic | 35.0% |
| !! | ACTTGTTTTCCGAAATTGCA+TGG | - | chr8_1:84077414-84077433 | None:intergenic | 35.0% |
| ! | GAGTGGTGCTAGAAAATATT+TGG | - | chr8_1:84077447-84077466 | None:intergenic | 35.0% |
| !! | TCTGTTGATGATGAATCTTC+TGG | - | chr8_1:84077511-84077530 | None:intergenic | 35.0% |
| !!! | GACAATGGTTTTTTGCTAAG+TGG | + | chr8_1:84077812-84077831 | Msa1220780:intron | 35.0% |
| GACAAATCATCACATAACTG+GGG | - | chr8_1:84078160-84078179 | None:intergenic | 35.0% | |
| CGACAAATCATCACATAACT+GGG | - | chr8_1:84078161-84078180 | None:intergenic | 35.0% | |
| !!! | TTGTCACTTTTGTGCATATG+TGG | - | chr8_1:84078303-84078322 | None:intergenic | 35.0% |
| ! | CTGCAAAAATAAGCCAGTTT+TGG | - | chr8_1:84078418-84078437 | None:intergenic | 35.0% |
| !!! | CAAAACTGGCTTATTTTTGC+AGG | + | chr8_1:84078416-84078435 | Msa1220780:intron | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | - | chr8_1:84078479-84078498 | None:intergenic | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | + | chr8_1:84078477-84078496 | Msa1220780:intron | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | - | chr8_1:84078428-84078447 | None:intergenic | 35.0% |
| AGTGGCAGAGAATAATAAGT+AGG | - | chr8_1:84078583-84078602 | None:intergenic | 35.0% | |
| !! | TATACGAACATTGACTTTGG+AGG | + | chr8_1:84078890-84078909 | Msa1220780:intron | 35.0% |
| !! | ATACGAACATTGACTTTGGA+GGG | + | chr8_1:84078891-84078910 | Msa1220780:intron | 35.0% |
| GTGTTTGTGTATGAATCTTC+AGG | + | chr8_1:84078913-84078932 | Msa1220780:intron | 35.0% | |
| ! | TTGGTTTCTGGATCTGATAT+TGG | - | chr8_1:84078945-84078964 | None:intergenic | 35.0% |
| AATATCAGATCCAGAAACCA+AGG | + | chr8_1:84078944-84078963 | Msa1220780:intron | 35.0% | |
| ATATCAGATCCAGAAACCAA+GGG | + | chr8_1:84078945-84078964 | Msa1220780:intron | 35.0% | |
| TCAAAATATCCCTTGGTTTC+TGG | - | chr8_1:84078957-84078976 | None:intergenic | 35.0% | |
| AAGGTAGGTCACCATTTATA+TGG | + | chr8_1:84078987-84079006 | Msa1220780:intron | 35.0% | |
| !! | GTTTTAAGCTAGCAAAATGC+TGG | - | chr8_1:84079106-84079125 | None:intergenic | 35.0% |
| !! | CATTTTGCTAGCTTAAAACC+AGG | + | chr8_1:84079107-84079126 | Msa1220780:intron | 35.0% |
| AGACTCAAGTTAGACATACT+TGG | + | chr8_1:84079418-84079437 | Msa1220780:intron | 35.0% | |
| ATACAAATTTAGTGAAGCGC+TGG | - | chr8_1:84079478-84079497 | None:intergenic | 35.0% | |
| !! | TGATTCAAGTTGTCTCAAGA+CGG | - | chr8_1:84079699-84079718 | None:intergenic | 35.0% |
| !! | GTTCGTTTTTGTAGTCTTTG+CGG | - | chr8_1:84079740-84079759 | None:intergenic | 35.0% |
| AATTACGCGGAAAATCCTTA+AGG | - | chr8_1:84079800-84079819 | None:intergenic | 35.0% | |
| ! | AACATGTCCCTCATTTTCAA+TGG | - | chr8_1:84079922-84079941 | None:intergenic | 35.0% |
| GCTTTGATATCTCATGAATG+TGG | - | chr8_1:84080141-84080160 | None:intergenic | 35.0% | |
| CAAAAGGGGTTACAAAACTT+TGG | + | chr8_1:84080160-84080179 | Msa1220780:intron | 35.0% | |
| AACTCAGTTACTAGACATTC+AGG | + | chr8_1:84080464-84080483 | Msa1220780:intron | 35.0% | |
| !! | ATTCAGATGGATTGTGATAG+GGG | - | chr8_1:84080612-84080631 | None:intergenic | 35.0% |
| ! | ACAAGAACGACTTTGATGAT+CGG | - | chr8_1:84080796-84080815 | None:intergenic | 35.0% |
| ATGTGTGAAAAGGTTGCTAA+AGG | + | chr8_1:84080904-84080923 | Msa1220780:intron | 35.0% | |
| ! | AATGACTGACATTTTCACCA+AGG | + | chr8_1:84080963-84080982 | Msa1220780:intron | 35.0% |
| ! | ATGACTGACATTTTCACCAA+GGG | + | chr8_1:84080964-84080983 | Msa1220780:intron | 35.0% |
| ATACACCTCCGTAGTTAAAA+CGG | - | chr8_1:84081044-84081063 | None:intergenic | 35.0% | |
| AAATGATTCACTGCAAGGAT+GGG | - | chr8_1:84081257-84081276 | None:intergenic | 35.0% | |
| AAAATGATTCACTGCAAGGA+TGG | - | chr8_1:84081258-84081277 | None:intergenic | 35.0% | |
| GCATTACAACATTATCTCTG+GGG | - | chr8_1:84081307-84081326 | None:intergenic | 35.0% | |
| GCAACTCAATCATTTAGTCA+AGG | - | chr8_1:84081361-84081380 | None:intergenic | 35.0% | |
| CAACACATAGAAAATGGAAG+GGG | - | chr8_1:84081403-84081422 | None:intergenic | 35.0% | |
| TGATTCACCCAGTCATTTAT+TGG | + | chr8_1:84081421-84081440 | Msa1220780:intron | 35.0% | |
| AAATGCGCCAATAAATGACT+GGG | - | chr8_1:84081431-84081450 | None:intergenic | 35.0% | |
| TAAATGCGCCAATAAATGAC+TGG | - | chr8_1:84081432-84081451 | None:intergenic | 35.0% | |
| GAACAAAGAATTGATCGCTT+TGG | - | chr8_1:84081464-84081483 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTTTTGTGGTGGCC+AGG | + | chr8_1:84081644-84081663 | Msa1220780:intron | 35.0% |
| TGCATAAAATATGCAAGGTC+CGG | - | chr8_1:84081678-84081697 | None:intergenic | 35.0% | |
| ! | TTAATGTGACCTTTTATCGG+AGG | + | chr8_1:84081971-84081990 | Msa1220780:intron | 35.0% |
| ACAAACAATCCTCCGATAAA+AGG | - | chr8_1:84081983-84082002 | None:intergenic | 35.0% | |
| ! | TTTTATCGGAGGATTGTTTG+TGG | + | chr8_1:84081982-84082001 | Msa1220780:intron | 35.0% |
| CATGACACTTACATTGTTCA+TGG | + | chr8_1:84082495-84082514 | Msa1220780:intron | 35.0% | |
| GGTTAATGTGGTAGTCAAAT+CGG | - | chr8_1:84082701-84082720 | None:intergenic | 35.0% | |
| ! | AGTGGCAAGGTTTAAGTTTA+AGG | - | chr8_1:84083241-84083260 | None:intergenic | 35.0% |
| GCATATATATAGTGAGGAAG+TGG | - | chr8_1:84083259-84083278 | None:intergenic | 35.0% | |
| !! | TGGTTATTGTTTTCAGGGTT+TGG | - | chr8_1:84083298-84083317 | None:intergenic | 35.0% |
| ATGAGAAAAACACGATGGAT+GGG | - | chr8_1:84083334-84083353 | None:intergenic | 35.0% | |
| AAAGCCATGGTTATTGTCAA+AGG | - | chr8_1:84083789-84083808 | None:intergenic | 35.0% | |
| AACAATGACTTCAAAAGGGA+AGG | + | chr8_1:84083864-84083883 | Msa1220780:CDS | 35.0% | |
| TGATCTGTTTGATTGAGGAA+GGG | - | chr8_1:84083934-84083953 | None:intergenic | 35.0% | |
| !! | AGATTTGGTGCTTGTAGAAA+CGG | + | chr8_1:84083993-84084012 | Msa1220780:intron | 35.0% |
| TGTGCAAGCATTATTGCAAT+GGG | + | chr8_1:84084159-84084178 | Msa1220780:CDS | 35.0% | |
| TATTCATTCCTAAACTGTGC+AGG | - | chr8_1:84084230-84084249 | None:intergenic | 35.0% | |
| AAAGAGACAGTTCTTTCCAT+AGG | - | chr8_1:84084393-84084412 | None:intergenic | 35.0% | |
| ! | CATTTTCCATTCAGAACCTT+AGG | - | chr8_1:84084702-84084721 | None:intergenic | 35.0% |
| ATAGTCTATACCATGATACC+CGG | + | chr8_1:84084854-84084873 | Msa1220780:intron | 35.0% | |
| ! | AAAATGCGGATTAAGGTATC+TGG | - | chr8_1:84084930-84084949 | None:intergenic | 35.0% |
| ! | CATAAGCAAAATGCGGATTA+AGG | - | chr8_1:84084937-84084956 | None:intergenic | 35.0% |
| ! | ATGTTGTTAATTGCTGTTCG+CGG | + | chr8_1:84084986-84085005 | Msa1220780:intron | 35.0% |
| ! | TGTAAGTGCTGTTAAATAGC+GGG | - | chr8_1:84085124-84085143 | None:intergenic | 35.0% |
| TAACCCCCTCTTTATTCTAA+TGG | + | chr8_1:84085239-84085258 | Msa1220780:intron | 35.0% | |
| GATCCATTAGAATAAAGAGG+GGG | - | chr8_1:84085245-84085264 | None:intergenic | 35.0% | |
| TATTCTGACTCCTGAAGTAT+CGG | + | chr8_1:84085737-84085756 | Msa1220780:intron | 35.0% | |
| AAATCAGAGTTACAAGTTCC+TGG | + | chr8_1:84085769-84085788 | Msa1220780:intron | 35.0% | |
| ! | CAACTAAGAAGCGTATACTT+GGG | + | chr8_1:84085869-84085888 | Msa1220780:CDS | 35.0% |
| CTCTTTGCTCATGATGAAGA+AGG | + | chr8_1:84076018-84076037 | Msa1220780:CDS | 40.0% | |
| TTTCCATCAGAACCTTAGGA+AGG | - | chr8_1:84076318-84076337 | None:intergenic | 40.0% | |
| ! | TTCTTCCTTTTCCACAAGTC+GGG | - | chr8_1:84076384-84076403 | None:intergenic | 40.0% |
| ! | CTTCTTCCTTTTCCACAAGT+CGG | - | chr8_1:84076385-84076404 | None:intergenic | 40.0% |
| ! | CTAAGAAGAAGCGTACACTT+GGG | + | chr8_1:84076411-84076430 | Msa1220780:CDS | 40.0% |
| CACCGTAAATACGATTGATC+TGG | - | chr8_1:84076448-84076467 | None:intergenic | 40.0% | |
| ! | ACGGTGATTGGATTGATGAT+TGG | + | chr8_1:84076462-84076481 | Msa1220780:CDS | 40.0% |
| !!! | ATTGGCCTTTTGTTATGCTC+TGG | + | chr8_1:84076480-84076499 | Msa1220780:intron | 40.0% |
| AATGAGATGTGTGCTCAACA+TGG | + | chr8_1:84076679-84076698 | Msa1220780:intron | 40.0% | |
| GCGGAAATGATATTTCCTAG+AGG | - | chr8_1:84076817-84076836 | None:intergenic | 40.0% | |
| TATGCTTGAAGCTGAGCTTT+GGG | - | chr8_1:84077128-84077147 | None:intergenic | 40.0% | |
| !! | GGAATTCTTTGAGATGATGC+GGG | - | chr8_1:84077193-84077212 | None:intergenic | 40.0% |
| TTATGGTGCAGTAACGAGAA+GGG | - | chr8_1:84077236-84077255 | None:intergenic | 40.0% | |
| !! | GTTCTAGTTCTTCTGTTCGA+TGG | - | chr8_1:84077294-84077313 | None:intergenic | 40.0% |
| GATTATCCGCCATGCAATTT+CGG | + | chr8_1:84077402-84077421 | Msa1220780:intron | 40.0% | |
| ! | TGTTTTCCGAAATTGCATGG+CGG | - | chr8_1:84077411-84077430 | None:intergenic | 40.0% |
| TTGGTGTGTTATGTTTGGAG+TGG | - | chr8_1:84077464-84077483 | None:intergenic | 40.0% | |
| GCGACAAATCATCACATAAC+TGG | - | chr8_1:84078162-84078181 | None:intergenic | 40.0% | |
| TCATCACATAATTGGGGTCA+AGG | + | chr8_1:84078324-84078343 | Msa1220780:intron | 40.0% | |
| ! | CAAAACTGACCCATTTTGCA+GGG | + | chr8_1:84078539-84078558 | Msa1220780:intron | 40.0% |
| !!! | ACCCTTTTAAAGAGGCACTT+CGG | + | chr8_1:84079032-84079051 | Msa1220780:intron | 40.0% |
| ! | TCCGAAGTGCCTCTTTAAAA+GGG | - | chr8_1:84079036-84079055 | None:intergenic | 40.0% |
| ! | CAAGGGGCTTTGATGATTAA+GGG | - | chr8_1:84079446-84079465 | None:intergenic | 40.0% |
| ! | ACAAGGGGCTTTGATGATTA+AGG | - | chr8_1:84079447-84079466 | None:intergenic | 40.0% |
| AGAAGGGTCTGTTAAATCCT+GGG | - | chr8_1:84079835-84079854 | None:intergenic | 40.0% | |
| ! | CCTCGATTTTACATCGAGAA+GGG | - | chr8_1:84079851-84079870 | None:intergenic | 40.0% |
| ! | TCCTCGATTTTACATCGAGA+AGG | - | chr8_1:84079852-84079871 | None:intergenic | 40.0% |
| ATGAACGTTATGCATTGCCT+TGG | + | chr8_1:84080069-84080088 | Msa1220780:intron | 40.0% | |
| TCTATCACAATGGCTCAACT+CGG | + | chr8_1:84080392-84080411 | Msa1220780:intron | 40.0% | |
| ACTCGGTAGTGAATTTGCAA+CGG | + | chr8_1:84080409-84080428 | Msa1220780:intron | 40.0% | |
| GAATTTGCAACGGAAGATCA+AGG | + | chr8_1:84080419-84080438 | Msa1220780:intron | 40.0% | |
| TCAGTTACTAGACATTCAGG+TGG | + | chr8_1:84080467-84080486 | Msa1220780:intron | 40.0% | |
| ACACATTTGTTTGACGGCAT+AGG | - | chr8_1:84080689-84080708 | None:intergenic | 40.0% | |
| TACACCTCCGTAGTTAAAAC+GGG | - | chr8_1:84081043-84081062 | None:intergenic | 40.0% | |
| AAGCTCAAGTTAGACACACT+TGG | + | chr8_1:84081126-84081145 | Msa1220780:intron | 40.0% | |
| AATGATTCACTGCAAGGATG+GGG | - | chr8_1:84081256-84081275 | None:intergenic | 40.0% | |
| AGAAAATGGAAGGGGAAAGA+GGG | - | chr8_1:84081395-84081414 | None:intergenic | 40.0% | |
| TAGAAAATGGAAGGGGAAAG+AGG | - | chr8_1:84081396-84081415 | None:intergenic | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | - | chr8_1:84081676-84081695 | None:intergenic | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | - | chr8_1:84081677-84081696 | None:intergenic | 40.0% | |
| ATTTCTCTACGTAACGTGCA+TGG | + | chr8_1:84081801-84081820 | Msa1220780:intron | 40.0% | |
| CATTATTGTTGTGCCGTAGA+TGG | - | chr8_1:84081948-84081967 | None:intergenic | 40.0% | |
| TCTTGTCATAGATATGGGTG+AGG | - | chr8_1:84082064-84082083 | None:intergenic | 40.0% | |
| TTCATCTTGTTCGTTGAACC+TGG | - | chr8_1:84082256-84082275 | None:intergenic | 40.0% | |
| AGGTTCAACGAACAAGATGA+AGG | + | chr8_1:84082255-84082274 | Msa1220780:intron | 40.0% | |
| ACGAAACGAAGTGGTAAAAG+TGG | + | chr8_1:84082826-84082845 | Msa1220780:intron | 40.0% | |
| !! | TAACTCTACTCAGGTTGAGT+TGG | + | chr8_1:84083128-84083147 | Msa1220780:intron | 40.0% |
| TATATAGTGAGGAAGTGGCA+AGG | - | chr8_1:84083254-84083273 | None:intergenic | 40.0% | |
| GATGAGAAAAACACGATGGA+TGG | - | chr8_1:84083335-84083354 | None:intergenic | 40.0% | |
| CCAAGATGAGAAAAACACGA+TGG | - | chr8_1:84083339-84083358 | None:intergenic | 40.0% | |
| ! | CCATCGTGTTTTTCTCATCT+TGG | + | chr8_1:84083336-84083355 | Msa1220780:intron | 40.0% |
| TTCAATGAAGTGAATTGCGG+CGG | - | chr8_1:84083843-84083862 | None:intergenic | 40.0% | |
| CTGATCTGTTTGATTGAGGA+AGG | - | chr8_1:84083935-84083954 | None:intergenic | 40.0% | |
| TGGTCTGATCTGTTTGATTG+AGG | - | chr8_1:84083939-84083958 | None:intergenic | 40.0% | |
| CTGTGCAAGCATTATTGCAA+TGG | + | chr8_1:84084158-84084177 | Msa1220780:CDS | 40.0% | |
| GTGCAAGCATTATTGCAATG+GGG | + | chr8_1:84084160-84084179 | Msa1220780:CDS | 40.0% | |
| ATGAAGATCCTGCACAGTTT+AGG | + | chr8_1:84084219-84084238 | Msa1220780:intron | 40.0% | |
| ! | GAAGCACTCTCTTGATTTCA+AGG | - | chr8_1:84084255-84084274 | None:intergenic | 40.0% |
| CTAATAATTTGGAAGGCAGC+AGG | + | chr8_1:84084291-84084310 | Msa1220780:CDS | 40.0% | |
| GAATGTGAACAAGCAAGCAA+GGG | + | chr8_1:84084313-84084332 | Msa1220780:CDS | 40.0% | |
| AATGTGAACAAGCAAGCAAG+GGG | + | chr8_1:84084314-84084333 | Msa1220780:CDS | 40.0% | |
| TAAACTGTGTCGCAATTGGA+AGG | + | chr8_1:84084352-84084371 | Msa1220780:CDS | 40.0% | |
| GAGACAGGATATTGTTCCTA+TGG | + | chr8_1:84084374-84084393 | Msa1220780:CDS | 40.0% | |
| AAGAACTGTCTCTTTGCTCA+TGG | + | chr8_1:84084398-84084417 | Msa1220780:CDS | 40.0% | |
| TGCAAAAATGTACCTCCCTA+AGG | + | chr8_1:84084683-84084702 | Msa1220780:intron | 40.0% | |
| GCTATGCCTATAAACAAGGA+TGG | - | chr8_1:84084728-84084747 | None:intergenic | 40.0% | |
| ! | TCCTTGTTTATAGGCATAGC+AGG | + | chr8_1:84084728-84084747 | Msa1220780:intron | 40.0% |
| ACCTGCTATGCCTATAAACA+AGG | - | chr8_1:84084732-84084751 | None:intergenic | 40.0% | |
| ! | AAGGTATCTGGCGAAAAATC+TGG | - | chr8_1:84084918-84084937 | None:intergenic | 40.0% |
| TCTATAGCACTATTGCAGAG+CGG | - | chr8_1:84085034-84085053 | None:intergenic | 40.0% | |
| ATGCCGTGATCCTCAATATT+GGG | + | chr8_1:84085512-84085531 | Msa1220780:intron | 40.0% | |
| CATGTTTGACCCCAATATTG+AGG | - | chr8_1:84085525-84085544 | None:intergenic | 40.0% | |
| CTCAATATTGGGGTCAAACA+TGG | + | chr8_1:84085523-84085542 | Msa1220780:intron | 40.0% | |
| CCAAGTATACGCTTCTTAGT+TGG | - | chr8_1:84085871-84085890 | None:intergenic | 40.0% | |
| ! | CCAACTAAGAAGCGTATACT+TGG | + | chr8_1:84085868-84085887 | Msa1220780:CDS | 40.0% |
| ATGGAAAATGCTCCTCCTAC+TGG | + | chr8_1:84076261-84076280 | Msa1220780:intron | 45.0% | |
| AAGGCAAAGGGAAAACCAGT+AGG | - | chr8_1:84076279-84076298 | None:intergenic | 45.0% | |
| ! | GTTCCTTCCTAAGGTTCTGA+TGG | + | chr8_1:84076312-84076331 | Msa1220780:intron | 45.0% |
| GCTCTGCCTATAAACAAGGA+TGG | - | chr8_1:84076347-84076366 | None:intergenic | 45.0% | |
| ! | TCCTTGTTTATAGGCAGAGC+AGG | + | chr8_1:84076347-84076366 | Msa1220780:intron | 45.0% |
| ACCTGCTCTGCCTATAAACA+AGG | - | chr8_1:84076351-84076370 | None:intergenic | 45.0% | |
| ! | TTCTGAATGTACCCGACTTG+TGG | + | chr8_1:84076370-84076389 | Msa1220780:CDS | 45.0% |
| ! | ATGTACCCGACTTGTGGAAA+AGG | + | chr8_1:84076376-84076395 | Msa1220780:CDS | 45.0% |
| CCAAGTGTACGCTTCTTCTT+AGG | - | chr8_1:84076413-84076432 | None:intergenic | 45.0% | |
| ! | CCTAAGAAGAAGCGTACACT+TGG | + | chr8_1:84076410-84076429 | Msa1220780:CDS | 45.0% |
| ! | CTCTGGAAACACACCTCATT+TGG | + | chr8_1:84076497-84076516 | Msa1220780:intron | 45.0% |
| TCAACATGGTGGCTGCTATA+AGG | + | chr8_1:84076693-84076712 | Msa1220780:intron | 45.0% | |
| GGCTGCTATAAGGTTGCAAA+TGG | + | chr8_1:84076703-84076722 | Msa1220780:intron | 45.0% | |
| GAGACGAATCTGCATAAACC+TGG | + | chr8_1:84077052-84077071 | Msa1220780:intron | 45.0% | |
| CTATGCTTGAAGCTGAGCTT+TGG | - | chr8_1:84077129-84077148 | None:intergenic | 45.0% | |
| CATAGAGCACAGAAGAGTCT+TGG | + | chr8_1:84077144-84077163 | Msa1220780:intron | 45.0% | |
| TATGGTGCAGTAACGAGAAG+GGG | - | chr8_1:84077235-84077254 | None:intergenic | 45.0% | |
| CTTATGGTGCAGTAACGAGA+AGG | - | chr8_1:84077237-84077256 | None:intergenic | 45.0% | |
| TCATCACATAACTGGGGTCA+GGG | - | chr8_1:84078154-84078173 | None:intergenic | 45.0% | |
| ATCATCACATAACTGGGGTC+AGG | - | chr8_1:84078155-84078174 | None:intergenic | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | + | chr8_1:84078402-84078421 | Msa1220780:intron | 45.0% | |
| ! | CCTGCAAAATGGGTCAGTTT+TGG | - | chr8_1:84078541-84078560 | None:intergenic | 45.0% |
| ! | CCAAAACTGACCCATTTTGC+AGG | + | chr8_1:84078538-84078557 | Msa1220780:intron | 45.0% |
| !! | GGTATTGGTCCCTGCAAAAT+GGG | - | chr8_1:84078551-84078570 | None:intergenic | 45.0% |
| !! | TGGTATTGGTCCCTGCAAAA+TGG | - | chr8_1:84078552-84078571 | None:intergenic | 45.0% |
| ! | CTCCGAAGTGCCTCTTTAAA+AGG | - | chr8_1:84079037-84079056 | None:intergenic | 45.0% |
| GTGCATCCTGAAGGAAGAAT+GGG | + | chr8_1:84079080-84079099 | Msa1220780:intron | 45.0% | |
| TAGCTTAAAACCAGGCGATG+AGG | + | chr8_1:84079115-84079134 | Msa1220780:intron | 45.0% | |
| GCGATGAGGTTCAAATGACA+GGG | + | chr8_1:84079129-84079148 | Msa1220780:intron | 45.0% | |
| ! | GGGGTTAGCGTATAATTACG+CGG | - | chr8_1:84079813-84079832 | None:intergenic | 45.0% |
| TAATTATACGCTAACCCCCC+AGG | + | chr8_1:84079815-84079834 | Msa1220780:intron | 45.0% | |
| AAGGGTCTGTTAAATCCTGG+GGG | - | chr8_1:84079833-84079852 | None:intergenic | 45.0% | |
| GAAGGGTCTGTTAAATCCTG+GGG | - | chr8_1:84079834-84079853 | None:intergenic | 45.0% | |
| GAGAAGGGTCTGTTAAATCC+TGG | - | chr8_1:84079836-84079855 | None:intergenic | 45.0% | |
| CCCTTCTCGATGTAAAATCG+AGG | + | chr8_1:84079848-84079867 | Msa1220780:intron | 45.0% | |
| GTCTGAGCACTTATTAGCCA+AGG | - | chr8_1:84080089-84080108 | None:intergenic | 45.0% | |
| TCAAACCAGTCTTTACCTCG+TGG | + | chr8_1:84080552-84080571 | Msa1220780:intron | 45.0% | |
| CAAACCAGTCTTTACCTCGT+GGG | + | chr8_1:84080553-84080572 | Msa1220780:intron | 45.0% | |
| ! | GTTTTTCTTTAGTGCCCACG+AGG | - | chr8_1:84080570-84080589 | None:intergenic | 45.0% |
| TGTGATAGGGGTTACTTGAG+AGG | - | chr8_1:84080600-84080619 | None:intergenic | 45.0% | |
| TAATTGCAGTGGAAGACCCT+TGG | - | chr8_1:84080983-84081002 | None:intergenic | 45.0% | |
| !!! | CGTCAACCCCGTTTTAACTA+CGG | + | chr8_1:84081033-84081052 | Msa1220780:intron | 45.0% |
| ACACCTCCGTAGTTAAAACG+GGG | - | chr8_1:84081042-84081061 | None:intergenic | 45.0% | |
| AATCAAATCCCCGTCTCTGA+TGG | + | chr8_1:84081209-84081228 | Msa1220780:intron | 45.0% | |
| ATCAAATCCCCGTCTCTGAT+GGG | + | chr8_1:84081210-84081229 | Msa1220780:intron | 45.0% | |
| ATACCGAAACCCATCAGAGA+CGG | - | chr8_1:84081222-84081241 | None:intergenic | 45.0% | |
| !! | TACAACATTATCTCTGGGGC+TGG | - | chr8_1:84081303-84081322 | None:intergenic | 45.0% |
| GAAAATGGAAGGGGAAAGAG+GGG | - | chr8_1:84081394-84081413 | None:intergenic | 45.0% | |
| GTGCATGGTCAATGTTTGCA+TGG | + | chr8_1:84081816-84081835 | Msa1220780:intron | 45.0% | |
| TTTGTGGCTAACCCAACACA+AGG | + | chr8_1:84081998-84082017 | Msa1220780:intron | 45.0% | |
| ! | TGCACGTAGTTAACCGCTTT+TGG | - | chr8_1:84082870-84082889 | None:intergenic | 45.0% |
| !!! | CTTGTTTTTTGGGTAGCTGC+TGG | + | chr8_1:84083202-84083221 | Msa1220780:intron | 45.0% |
| GGATGGGATGATCAAAGGTT+TGG | - | chr8_1:84083318-84083337 | None:intergenic | 45.0% | |
| ACGATGGATGGGATGATCAA+AGG | - | chr8_1:84083323-84083342 | None:intergenic | 45.0% | |
| ! | AGGAGGGCATATCAATGGAT+TGG | - | chr8_1:84083901-84083920 | None:intergenic | 45.0% |
| CTCATGGAGCTGAAGAGATA+AGG | + | chr8_1:84084033-84084052 | Msa1220780:CDS | 45.0% | |
| ! | ACTAGCTTCTGCGAATTTGG+TGG | - | chr8_1:84084065-84084084 | None:intergenic | 45.0% |
| ! | CCAACTAGCTTCTGCGAATT+TGG | - | chr8_1:84084068-84084087 | None:intergenic | 45.0% |
| CCAAATTCGCAGAAGCTAGT+TGG | + | chr8_1:84084065-84084084 | Msa1220780:CDS | 45.0% | |
| TTGGTCCGTGTAACGATGAT+CGG | + | chr8_1:84084084-84084103 | Msa1220780:CDS | 45.0% | |
| CAAGCATTATTGCAATGGGG+AGG | + | chr8_1:84084163-84084182 | Msa1220780:CDS | 45.0% | |
| AATGGGGAGGAATGTCCATA+TGG | + | chr8_1:84084176-84084195 | Msa1220780:CDS | 45.0% | |
| ACTGTGCAGGATCTTCATGA+AGG | - | chr8_1:84084217-84084236 | None:intergenic | 45.0% | |
| GGAATGTGAACAAGCAAGCA+AGG | + | chr8_1:84084312-84084331 | Msa1220780:CDS | 45.0% | |
| CGACTAAACTGTGTCGCAAT+TGG | + | chr8_1:84084348-84084367 | Msa1220780:CDS | 45.0% | |
| CTCTTTGCTCATGGTGAAGA+AGG | + | chr8_1:84084407-84084426 | Msa1220780:CDS | 45.0% | |
| AAGGCAATGGGACAACAAGT+AGG | - | chr8_1:84084659-84084678 | None:intergenic | 45.0% | |
| !! | TACCTCCCTAAGGTTCTGAA+TGG | + | chr8_1:84084693-84084712 | Msa1220780:intron | 45.0% |
| TTCCATTCAGAACCTTAGGG+AGG | - | chr8_1:84084698-84084717 | None:intergenic | 45.0% | |
| !! | TTTCTGCCATAAATGGGCTG+TGG | + | chr8_1:84084806-84084825 | Msa1220780:intron | 45.0% |
| GGCATATAAACATGGAGCTG+CGG | - | chr8_1:84084897-84084916 | None:intergenic | 45.0% | |
| ! | TTGCTGTTCGCGGAAAAATG+TGG | + | chr8_1:84084996-84085015 | Msa1220780:intron | 45.0% |
| TTCCTGACAATGCGGTTGAT+GGG | - | chr8_1:84085174-84085193 | None:intergenic | 45.0% | |
| ATTCCTGACAATGCGGTTGA+TGG | - | chr8_1:84085175-84085194 | None:intergenic | 45.0% | |
| CAATATTGAGGATCACGGCA+TGG | - | chr8_1:84085513-84085532 | None:intergenic | 45.0% | |
| CATGCCGTGATCCTCAATAT+TGG | + | chr8_1:84085511-84085530 | Msa1220780:intron | 45.0% | |
| TGCCGTGATCCTCAATATTG+GGG | + | chr8_1:84085513-84085532 | Msa1220780:intron | 45.0% | |
| GACCCCAATATTGAGGATCA+CGG | - | chr8_1:84085518-84085537 | None:intergenic | 45.0% | |
| TGCAAGACAACCGATACTTC+AGG | - | chr8_1:84085750-84085769 | None:intergenic | 45.0% | |
| TCAGAGTTACAAGTTCCTGG+TGG | + | chr8_1:84085772-84085791 | Msa1220780:intron | 45.0% | |
| AACTGCAGCATCAGCTTCAA+TGG | - | chr8_1:84085800-84085819 | None:intergenic | 45.0% | |
| GTATACGCTTCTTAGTTGGC+TGG | - | chr8_1:84085867-84085886 | None:intergenic | 45.0% | |
| !! | TAAATAAAAAAAATACTAAT+TGG | - | chr8_1:84077979-84077998 | None:intergenic | 5.0% |
| !!! | TATTTTTTTTATTTAATCAT+TGG | + | chr8_1:84077984-84078003 | Msa1220780:intron | 5.0% |
| !!! | TTTAACATTATTATTTTTAT+TGG | + | chr8_1:84078063-84078082 | Msa1220780:intron | 5.0% |
| !!! | AAATTTTTTTTTATAGTTTT+TGG | - | chr8_1:84078382-84078401 | None:intergenic | 5.0% |
| !!! | AATTTTTTTTTTATAGTTTT+TGG | - | chr8_1:84078505-84078524 | None:intergenic | 5.0% |
| !! | TGATATTATAATTAATTATA+AGG | - | chr8_1:84080217-84080236 | None:intergenic | 5.0% |
| GCAAAGGGAAAACCAGTAGG+AGG | - | chr8_1:84076276-84076295 | None:intergenic | 50.0% | |
| GAGATGTGTGCTCAACATGG+TGG | + | chr8_1:84076682-84076701 | Msa1220780:intron | 50.0% | |
| TTCCGCGGCATCAACCAAAA+AGG | + | chr8_1:84076831-84076850 | Msa1220780:intron | 50.0% | |
| !!! | TGCCTTTTTGGTTGATGCCG+CGG | - | chr8_1:84076836-84076855 | None:intergenic | 50.0% |
| GGGGATATGTCGTCTTGTAG+AGG | - | chr8_1:84077214-84077233 | None:intergenic | 50.0% | |
| ATGGTGCAGTAACGAGAAGG+GGG | - | chr8_1:84077234-84077253 | None:intergenic | 50.0% | |
| TTGTTGCAGGTGCATCCTGA+AGG | + | chr8_1:84079071-84079090 | Msa1220780:intron | 50.0% | |
| GGTGCATCCTGAAGGAAGAA+TGG | + | chr8_1:84079079-84079098 | Msa1220780:intron | 50.0% | |
| GTCATTTGAACCTCATCGCC+TGG | - | chr8_1:84079128-84079147 | None:intergenic | 50.0% | |
| GGCGATGAGGTTCAAATGAC+AGG | + | chr8_1:84079128-84079147 | Msa1220780:intron | 50.0% | |
| TGCTGATCGCACTGTCCTTA+AGG | + | chr8_1:84079782-84079801 | Msa1220780:intron | 50.0% | |
| AGGGTCTGTTAAATCCTGGG+GGG | - | chr8_1:84079832-84079851 | None:intergenic | 50.0% | |
| TTGACGGCATAGGCGATATC+AGG | - | chr8_1:84080679-84080698 | None:intergenic | 50.0% | |
| ! | CGACTTTGATGATCGGACAC+TGG | - | chr8_1:84080789-84080808 | None:intergenic | 50.0% |
| !!! | CAACCCCGTTTTAACTACGG+AGG | + | chr8_1:84081036-84081055 | Msa1220780:intron | 50.0% |
| TACCGAAACCCATCAGAGAC+GGG | - | chr8_1:84081221-84081240 | None:intergenic | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+TGG | - | chr8_1:84081705-84081724 | None:intergenic | 50.0% | |
| GAATGACCGCTCACCATCTA+CGG | + | chr8_1:84081932-84081951 | Msa1220780:intron | 50.0% | |
| ! | CTTGGAGGAGGGCATATCAA+TGG | - | chr8_1:84083906-84083925 | None:intergenic | 50.0% |
| CATTGATATGCCCTCCTCCA+AGG | + | chr8_1:84083904-84083923 | Msa1220780:CDS | 50.0% | |
| GATTGAGGAAGGGTCATCCT+TGG | - | chr8_1:84083924-84083943 | None:intergenic | 50.0% | |
| ! | AGCTTCTGCGAATTTGGTGG+TGG | - | chr8_1:84084062-84084081 | None:intergenic | 50.0% |
| TGCAGCCGATCATCGTTACA+CGG | - | chr8_1:84084092-84084111 | None:intergenic | 50.0% | |
| ATCGGCTGCAGCTGGAAAAT+CGG | + | chr8_1:84084102-84084121 | Msa1220780:CDS | 50.0% | |
| !! | AGCAAGCAAGGGGCACTTAT+CGG | + | chr8_1:84084324-84084343 | Msa1220780:CDS | 50.0% |
| TGTCGCAATTGGAAGGAGAC+AGG | + | chr8_1:84084359-84084378 | Msa1220780:CDS | 50.0% | |
| GCAATGGGACAACAAGTAGG+AGG | - | chr8_1:84084656-84084675 | None:intergenic | 50.0% | |
| !! | ATAAATGGGCTGTGGCATGG+CGG | + | chr8_1:84084814-84084833 | Msa1220780:intron | 50.0% |
| !! | ATGGCGGACTTTGTGCTAGT+CGG | + | chr8_1:84084830-84084849 | Msa1220780:intron | 50.0% |
| TGGAAACAAGCCGGGTATCA+TGG | - | chr8_1:84084867-84084886 | None:intergenic | 50.0% | |
| ! | GCATATGGTGGAAACAAGCC+GGG | - | chr8_1:84084875-84084894 | None:intergenic | 50.0% |
| ! | GGCATATGGTGGAAACAAGC+CGG | - | chr8_1:84084876-84084895 | None:intergenic | 50.0% |
| AAACATGGAGCTGCGGCATA+TGG | - | chr8_1:84084890-84084909 | None:intergenic | 50.0% | |
| TTCCCATCAACCGCATTGTC+AGG | + | chr8_1:84085169-84085188 | Msa1220780:intron | 50.0% | |
| AACTGCAGCTTCGGCTTCAA+TGG | - | chr8_1:84085824-84085843 | None:intergenic | 50.0% | |
| TGCTATGGCAACTGCAGCTT+CGG | - | chr8_1:84085833-84085852 | None:intergenic | 50.0% | |
| AGCTGCAGTTGCCATAGCAA+AGG | + | chr8_1:84085834-84085853 | Msa1220780:CDS | 50.0% | |
| CTGGTGCTCTTCCTTTGCTA+TGG | - | chr8_1:84085848-84085867 | None:intergenic | 50.0% | |
| TGGTGCAGTAACGAGAAGGG+GGG | - | chr8_1:84077233-84077252 | None:intergenic | 55.0% | |
| CGATGGGAGCTGCCTCATAA+TGG | - | chr8_1:84077277-84077296 | None:intergenic | 55.0% | |
| TGCTGGCCCATTCTTCCTTC+AGG | - | chr8_1:84079089-84079108 | None:intergenic | 55.0% | |
| TCATCAAAGCCCCTTGTGCC+TGG | + | chr8_1:84079450-84079469 | Msa1220780:intron | 55.0% | |
| !! | TTTAGTGAAGCGCTGGCACC+AGG | - | chr8_1:84079471-84079490 | None:intergenic | 55.0% |
| AGTGCCCACGAGGTAAAGAC+TGG | - | chr8_1:84080560-84080579 | None:intergenic | 55.0% | |
| GGCATAGGCGATATCAGGTC+GGG | - | chr8_1:84080674-84080693 | None:intergenic | 55.0% | |
| CGGCATAGGCGATATCAGGT+CGG | - | chr8_1:84080675-84080694 | None:intergenic | 55.0% | |
| !! | TCCCCGTCTCTGATGGGTTT+CGG | + | chr8_1:84081216-84081235 | Msa1220780:intron | 55.0% |
| ACCGAAACCCATCAGAGACG+GGG | - | chr8_1:84081220-84081239 | None:intergenic | 55.0% | |
| CTGCAAGGATGGGGATGAGA+CGG | - | chr8_1:84081247-84081266 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr8_1:84081709-84081728 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr8_1:84081706-84081725 | Msa1220780:intron | 55.0% | |
| GTTGTGCCGTAGATGGTGAG+CGG | - | chr8_1:84081941-84081960 | None:intergenic | 55.0% | |
| GGCGGTGACATCTTAGAGGT+TGG | - | chr8_1:84083825-84083844 | None:intergenic | 55.0% | |
| TTGCGGCGGTGACATCTTAG+AGG | - | chr8_1:84083829-84083848 | None:intergenic | 55.0% | |
| GAAGGGTCATCCTTGGAGGA+GGG | - | chr8_1:84083917-84083936 | None:intergenic | 55.0% | |
| TGAGGAAGGGTCATCCTTGG+AGG | - | chr8_1:84083921-84083940 | None:intergenic | 55.0% | |
| TAACGATGATCGGCTGCAGC+TGG | + | chr8_1:84084094-84084113 | Msa1220780:CDS | 55.0% | |
| TCGGCTGCAGCTGGAAAATC+GGG | + | chr8_1:84084103-84084122 | Msa1220780:CDS | 55.0% | |
| !! | GCCATAAATGGGCTGTGGCA+TGG | + | chr8_1:84084811-84084830 | Msa1220780:intron | 55.0% |
| GCCATGCCACAGCCCATTTA+TGG | - | chr8_1:84084815-84084834 | None:intergenic | 55.0% | |
| TCTCAGCCACACCACAGTCA+TGG | + | chr8_1:84085584-84085603 | Msa1220780:intron | 55.0% | |
| AAGGTCTGCGACCATGACTG+TGG | - | chr8_1:84085598-84085617 | None:intergenic | 55.0% | |
| TCAGCTTCAATGGCTCCACC+AGG | - | chr8_1:84085790-84085809 | None:intergenic | 55.0% | |
| TGGTGGCCAGGTTTGAACCC+CGG | + | chr8_1:84081656-84081675 | Msa1220780:intron | 60.0% | |
| CAAGGTCCGGGGTTCAAACC+TGG | - | chr8_1:84081665-84081684 | None:intergenic | 60.0% | |
| GGAAGGGTCATCCTTGGAGG+AGG | - | chr8_1:84083918-84083937 | None:intergenic | 60.0% | |
| CATGGAGCTGCGGCATATGG+TGG | - | chr8_1:84084887-84084906 | None:intergenic | 60.0% | |
| CTGCGACCATGACTGTGGTG+TGG | - | chr8_1:84085593-84085612 | None:intergenic | 60.0% | |
| !! | AGCGCTGGCACCAGGCACAA+GGG | - | chr8_1:84079463-84079482 | None:intergenic | 65.0% |
| !! | AAGCGCTGGCACCAGGCACA+AGG | - | chr8_1:84079464-84079483 | None:intergenic | 65.0% |
| ! | GCGCTGGCACCAGGCACAAG+GGG | - | chr8_1:84079462-84079481 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 84076009 | 84085921 | 84076009 | ID=Msa1220780;Name=Msa1220780 |
| chr8_1 | mRNA | 84076009 | 84085921 | 84076009 | ID=Msa1220780-mRNA-1;Parent=Msa1220780;Name=Msa1220780-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0|1|0.4|0.16|6|0|297 |
| chr8_1 | exon | 84076009 | 84076039 | 84076009 | ID=Msa1220780-mRNA-1:exon:30147;Parent=Msa1220780-mRNA-1 |
| chr8_1 | exon | 84076360 | 84076490 | 84076360 | ID=Msa1220780-mRNA-1:exon:30148;Parent=Msa1220780-mRNA-1 |
| chr8_1 | exon | 84083834 | 84083988 | 84083834 | ID=Msa1220780-mRNA-1:exon:30149;Parent=Msa1220780-mRNA-1 |
| chr8_1 | exon | 84083995 | 84084234 | 84083995 | ID=Msa1220780-mRNA-1:exon:30150;Parent=Msa1220780-mRNA-1 |
| chr8_1 | exon | 84084241 | 84084428 | 84084241 | ID=Msa1220780-mRNA-1:exon:30151;Parent=Msa1220780-mRNA-1 |
| chr8_1 | exon | 84085776 | 84085921 | 84085776 | ID=Msa1220780-mRNA-1:exon:30152;Parent=Msa1220780-mRNA-1 |
| chr8_1 | CDS | 84076009 | 84076039 | 84076009 | ID=Msa1220780-mRNA-1:cds;Parent=Msa1220780-mRNA-1 |
| chr8_1 | CDS | 84076360 | 84076490 | 84076360 | ID=Msa1220780-mRNA-1:cds;Parent=Msa1220780-mRNA-1 |
| chr8_1 | CDS | 84083834 | 84083988 | 84083834 | ID=Msa1220780-mRNA-1:cds;Parent=Msa1220780-mRNA-1 |
| chr8_1 | CDS | 84083995 | 84084234 | 84083995 | ID=Msa1220780-mRNA-1:cds;Parent=Msa1220780-mRNA-1 |
| chr8_1 | CDS | 84084241 | 84084428 | 84084241 | ID=Msa1220780-mRNA-1:cds;Parent=Msa1220780-mRNA-1 |
| chr8_1 | CDS | 84085776 | 84085921 | 84085776 | ID=Msa1220780-mRNA-1:cds;Parent=Msa1220780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
