Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220830 | XP_003609285.1 | 88.283 | 623 | 33 | 4 | 1 | 612 | 1 | 594 | 0.0 | 1076 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220830 | sp|Q0J952|C3H32_ORYSJ | 51.852 | 135 | 38 | 3 | 2 | 132 | 27 | 138 | 1.92e-36 | 148 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220830 | G7JVC6 | 88.283 | 623 | 33 | 4 | 1 | 612 | 1 | 594 | 0.0 | 1076 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1220830 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220830 | MtrunA17_Chr4g0063461 | 88.283 | 623 | 33 | 4 | 1 | 612 | 1 | 594 | 0.0 | 1076 |
| Msa1220830 | MtrunA17_Chr8g0375251 | 57.037 | 135 | 36 | 3 | 7 | 133 | 117 | 237 | 1.55e-40 | 157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220830 | AT2G02160.1 | 53.383 | 133 | 45 | 3 | 2 | 133 | 25 | 141 | 1.12e-36 | 145 |
Find 136 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTGTTGGTATTGGTTATC+TGG | 0.119856 | 8_1:+84185125 | Msa1220830:CDS |
| CACCGATTGCGTTTATTTCT+TGG | 0.184040 | 8_1:+84184763 | Msa1220830:CDS |
| TTACACTAACATTACGATTA+TGG | 0.188185 | 8_1:-84184645 | None:intergenic |
| TTGCTTCAAAATTTCTTCTT+TGG | 0.213240 | 8_1:+84186670 | Msa1220830:CDS |
| CTTGCCTTTGATGCCTTTCC+CGG | 0.220942 | 8_1:-84187279 | None:intergenic |
| TTTGCAGAGTCATTCTTTAA+AGG | 0.222829 | 8_1:-84186326 | None:intergenic |
| TTGCTTCACAATTGGTTTCC+TGG | 0.230232 | 8_1:-84187482 | None:intergenic |
| TTTGCAGAGTCATTCTTTAA+AGG | 0.231560 | 8_1:-84186350 | None:intergenic |
| TTAATATCGGACAAAGCTTT+TGG | 0.255089 | 8_1:-84186596 | None:intergenic |
| AATAAACCCAACTTAGAAAA+TGG | 0.256208 | 8_1:+84186497 | Msa1220830:CDS |
| CATTCAGAGGTTTGGGATCC+TGG | 0.288878 | 8_1:-84187621 | None:intergenic |
| CTGCATTTCCACTTCTCATT+TGG | 0.291645 | 8_1:+84185210 | Msa1220830:CDS |
| GCTTTCTTGGCCTACTTTGC+TGG | 0.293087 | 8_1:-84187411 | None:intergenic |
| CCAACAAGCAAAGGTTATTC+AGG | 0.302583 | 8_1:+84187383 | Msa1220830:CDS |
| TACACTAACATTACGATTAT+GGG | 0.303259 | 8_1:-84184644 | None:intergenic |
| GAGAATTTCATTCAGAGGTT+TGG | 0.311271 | 8_1:-84187629 | None:intergenic |
| AGAATTTCATTCAGAGGTTT+GGG | 0.313834 | 8_1:-84187628 | None:intergenic |
| ACATGAGTCGTCTTCTTTGA+TGG | 0.333051 | 8_1:+84187249 | Msa1220830:CDS |
| CCTGAATAACCTTTGCTTGT+TGG | 0.334230 | 8_1:-84187383 | None:intergenic |
| CGCTGATATTCTTTATGAAC+AGG | 0.343310 | 8_1:+84186997 | Msa1220830:CDS |
| GGTTTCCTGGATTCTTTAGA+AGG | 0.343832 | 8_1:-84187469 | None:intergenic |
| CTTGGCCTACTTTGCTGGTA+AGG | 0.345619 | 8_1:-84187406 | None:intergenic |
| AGTATTGCTCATTCAGTTCA+TGG | 0.346407 | 8_1:-84186925 | None:intergenic |
| TTTATTTCTGCAAGAGTCTT+GGG | 0.348071 | 8_1:-84187541 | None:intergenic |
| GTTCTTGTTCATGATGAATC+TGG | 0.352114 | 8_1:+84186845 | Msa1220830:CDS |
| CTTCTTTGATGGTTCAAAAC+CGG | 0.368582 | 8_1:+84187260 | Msa1220830:CDS |
| ATATTTGCCAGTGCTTGATA+TGG | 0.374679 | 8_1:+84186898 | Msa1220830:CDS |
| GCCATCTCTCACTCAATCTA+TGG | 0.380953 | 8_1:-84187662 | None:intergenic |
| TGGGAACAACCTGGGTTATG+AGG | 0.406841 | 8_1:+84186865 | Msa1220830:CDS |
| GGCTTAACCCGAGGGATTGT+TGG | 0.407402 | 8_1:+84185111 | Msa1220830:CDS |
| TCGGGTAATGGTAGCACCTT+AGG | 0.408765 | 8_1:-84186626 | None:intergenic |
| AAGCTCGTCAGCTGGTTTCC+AGG | 0.411618 | 8_1:+84187603 | Msa1220830:CDS |
| GATCTCTGTTGCTTCACAAT+TGG | 0.413086 | 8_1:-84187490 | None:intergenic |
| ACCCGAGGGATTGTTGGTAT+TGG | 0.421246 | 8_1:+84185117 | Msa1220830:CDS |
| ATTGTTGGTATTGGTTATCT+GGG | 0.423158 | 8_1:+84185126 | Msa1220830:CDS |
| TTAGAAAATGGAACTGCATC+GGG | 0.423544 | 8_1:+84186509 | Msa1220830:CDS |
| TTATGAGCAACGCCGTCGTC+TGG | 0.423938 | 8_1:-84186734 | None:intergenic |
| AGTATCTAAGACCATCTCTC+TGG | 0.436807 | 8_1:-84187092 | None:intergenic |
| GGAGGAAATGGCCGTTTAGC+TGG | 0.441000 | 8_1:-84187448 | None:intergenic |
| TTCTTTGATGGTTCAAAACC+GGG | 0.442952 | 8_1:+84187261 | Msa1220830:CDS |
| CTTCCATTGTCATTCTTCAA+AGG | 0.447586 | 8_1:-84186470 | None:intergenic |
| TGAACTGAATGAGCAATACT+TGG | 0.452267 | 8_1:+84186928 | Msa1220830:CDS |
| TTCACAATGTGAACTTTCAC+CGG | 0.467502 | 8_1:-84187581 | None:intergenic |
| CTTAGGCTGAGGTTTAATAT+CGG | 0.475768 | 8_1:-84186609 | None:intergenic |
| TCAGGCCTTACCAGCAAAGT+AGG | 0.477593 | 8_1:+84187401 | Msa1220830:CDS |
| GATTCTTTAGAAGGAGGAAA+TGG | 0.479581 | 8_1:-84187460 | None:intergenic |
| CATTGTGAAAGCTCGTCAGC+TGG | 0.479616 | 8_1:+84187595 | Msa1220830:CDS |
| ACTGCAAAGCCTTTGAAGAA+TGG | 0.483365 | 8_1:+84186389 | Msa1220830:CDS |
| TTCCTCCTTCTAAAGAATCC+AGG | 0.492036 | 8_1:+84187464 | Msa1220830:CDS |
| TGAACAAGAACATCAAATCC+AGG | 0.492763 | 8_1:-84186833 | None:intergenic |
| TGAATGAAATTCTCAAAGAC+AGG | 0.493790 | 8_1:+84187638 | Msa1220830:CDS |
| TGATGAATCTGGGAACAACC+TGG | 0.493882 | 8_1:+84186856 | Msa1220830:CDS |
| GCAACGCCGTCGTCTGGTAA+TGG | 0.495107 | 8_1:-84186728 | None:intergenic |
| CCACAAACTTTCCTTTCACT+AGG | 0.496086 | 8_1:-84187064 | None:intergenic |
| CAAATGAGAAGTGGAAATGC+AGG | 0.496121 | 8_1:-84185209 | None:intergenic |
| TTCACCCCTCACTTGCAAGA+AGG | 0.501218 | 8_1:+84184787 | Msa1220830:CDS |
| TGATGGTTCAAAACCGGGAA+AGG | 0.501541 | 8_1:+84187266 | Msa1220830:CDS |
| ACTCCAGTGTGTCCATCCAC+AGG | 0.509244 | 8_1:-84186086 | None:intergenic |
| CTTCTTAAGAGACCTGTGTC+AGG | 0.510576 | 8_1:-84187226 | None:intergenic |
| CTTGGGCCCTGAAAATGCAT+TGG | 0.511654 | 8_1:-84187524 | None:intergenic |
| TTTCCAGCGTCATTCTTCAA+AGG | 0.516545 | 8_1:-84186254 | None:intergenic |
| TTTCCAGCGTCATTCTTCAA+AGG | 0.516545 | 8_1:-84186278 | None:intergenic |
| CTCTCTCAGTGTAACGAACA+TGG | 0.517720 | 8_1:+84184718 | Msa1220830:exon |
| ACAGTGAGCGAGCTATCATC+AGG | 0.522943 | 8_1:-84186227 | None:intergenic |
| TTTGCAGAGTCATTCTTCAA+AGG | 0.525080 | 8_1:-84186302 | None:intergenic |
| GAAGATTGTGCAGGTTCAGA+TGG | 0.529009 | 8_1:-84186110 | None:intergenic |
| GTTCTGTAAGTAGGTGGGGA+TGG | 0.532694 | 8_1:+84185519 | Msa1220830:intron |
| TTCTTGTTCATGATGAATCT+GGG | 0.535477 | 8_1:+84186846 | Msa1220830:CDS |
| TTCACAGTGTCAATCTTCAA+AGG | 0.538247 | 8_1:-84186422 | None:intergenic |
| AGCCAAGAAATAAACGCAAT+CGG | 0.538661 | 8_1:-84184765 | None:intergenic |
| TTCACAGTGTCAATCTTCAA+AGG | 0.539488 | 8_1:-84186446 | None:intergenic |
| TTTCAATTGCCAACAAGCAA+AGG | 0.539740 | 8_1:+84187374 | Msa1220830:CDS |
| TTGAACCTTCTTGCAAGTGA+GGG | 0.541701 | 8_1:-84184792 | None:intergenic |
| CTTAGAAAATGGAACTGCAT+CGG | 0.543707 | 8_1:+84186508 | Msa1220830:CDS |
| CCTAGTGAAAGGAAAGTTTG+TGG | 0.543844 | 8_1:+84187064 | Msa1220830:CDS |
| TTTGCAGAGCCATTCTTCAA+AGG | 0.546293 | 8_1:-84186398 | None:intergenic |
| GAACTCTGCTCAGTGAATGA+AGG | 0.549641 | 8_1:-84186764 | None:intergenic |
| AACCAATACCAACAATCCCT+CGG | 0.549767 | 8_1:-84185119 | None:intergenic |
| ACCAATACCAACAATCCCTC+GGG | 0.552430 | 8_1:-84185118 | None:intergenic |
| TTTGCAGTGTCAATCTTCAA+AGG | 0.552856 | 8_1:-84186374 | None:intergenic |
| GAACTGAATGAGCAATACTT+GGG | 0.554055 | 8_1:+84186929 | Msa1220830:CDS |
| GGGAACAACCTGGGTTATGA+GGG | 0.557547 | 8_1:+84186866 | Msa1220830:CDS |
| GGTTAAGCCTCGCAATCTCA+TGG | 0.558877 | 8_1:-84185097 | None:intergenic |
| CGATATTAAACCTCAGCCTA+AGG | 0.559436 | 8_1:+84186610 | Msa1220830:CDS |
| ATTGAACCTTCTTGCAAGTG+AGG | 0.561506 | 8_1:-84184793 | None:intergenic |
| AAAACCGGGAAAGGCATCAA+AGG | 0.564085 | 8_1:+84187275 | Msa1220830:CDS |
| ATTCACTGAGCAGAGTTCAG+AGG | 0.565256 | 8_1:+84186769 | Msa1220830:CDS |
| ACAAGCAGCCATCTCAGAAG+TGG | 0.566131 | 8_1:-84187143 | None:intergenic |
| TCTTTGAGAATTTCATTCAG+AGG | 0.567578 | 8_1:-84187634 | None:intergenic |
| TCGAATGTCCACTTCTGAGA+TGG | 0.567972 | 8_1:+84187135 | Msa1220830:CDS |
| ATAAAGAAGCTGCTGTGACT+CGG | 0.570342 | 8_1:+84186696 | Msa1220830:CDS |
| AATGGTAGCACCTTAGGCTG+AGG | 0.571158 | 8_1:-84186620 | None:intergenic |
| GATTACGACACTATGTGCTC+AGG | 0.573085 | 8_1:+84186974 | Msa1220830:CDS |
| CAGCCTGTGGATGGACACAC+TGG | 0.576235 | 8_1:+84186083 | Msa1220830:intron |
| GTATCTAAGACCATCTCTCT+GGG | 0.580465 | 8_1:-84187091 | None:intergenic |
| TGGTCATCCATATCAAGCAC+TGG | 0.581438 | 8_1:-84186905 | None:intergenic |
| TTCCTGGATTCTTTAGAAGG+AGG | 0.583182 | 8_1:-84187466 | None:intergenic |
| TGGTTTAAATGTGTATCCCT+TGG | 0.586917 | 8_1:-84186560 | None:intergenic |
| AAATAGTCAAGTAGAGCCTG+AGG | 0.587572 | 8_1:+84186799 | Msa1220830:CDS |
| GAACAAGAACATCAAATCCA+GGG | 0.590993 | 8_1:-84186832 | None:intergenic |
| CCCGAAAATATTAAACAGCA+AGG | 0.591141 | 8_1:+84186644 | Msa1220830:CDS |
| AGAAGATTAACATCACAAGT+AGG | 0.593281 | 8_1:+84187322 | Msa1220830:CDS |
| GTCAATAGTCCTCCTGACAC+AGG | 0.595790 | 8_1:+84187214 | Msa1220830:CDS |
| GCATGTAATGAAGATTGTGC+AGG | 0.600024 | 8_1:-84186119 | None:intergenic |
| TTGTGGTTATCCCAGAGAGA+TGG | 0.602992 | 8_1:+84187081 | Msa1220830:CDS |
| AAGCCTTTGAAGAATGACGC+TGG | 0.609423 | 8_1:+84186275 | Msa1220830:CDS |
| TGTTCGTTACACTGAGAGAG+AGG | 0.609658 | 8_1:-84184715 | None:intergenic |
| TGAACCTTCTTGCAAGTGAG+GGG | 0.613141 | 8_1:-84184791 | None:intergenic |
| GATGAATCTGGGAACAACCT+GGG | 0.613350 | 8_1:+84186857 | Msa1220830:CDS |
| AGGGTGTAGAATGTGAGTAT+AGG | 0.616264 | 8_1:+84185072 | Msa1220830:intron |
| ACAATCTTCATTACATGCAA+CGG | 0.616298 | 8_1:+84186124 | Msa1220830:CDS |
| AGGCATCAAAGGCAAGACAT+TGG | 0.618149 | 8_1:+84187286 | Msa1220830:CDS |
| AAATGAGAAGTGGAAATGCA+GGG | 0.619730 | 8_1:-84185208 | None:intergenic |
| AACAACCTGGGTTATGAGGG+CGG | 0.623566 | 8_1:+84186869 | Msa1220830:CDS |
| TGTAGCATCGTCCACACCAA+GGG | 0.625248 | 8_1:+84186544 | Msa1220830:CDS |
| GATTGCGAGGCTTAACCCGA+GGG | 0.627528 | 8_1:+84185103 | Msa1220830:CDS |
| GGGTGTCTAAAAGCACAAGT+TGG | 0.629066 | 8_1:-84185161 | None:intergenic |
| AAGCCTTTGAAGAATGACGC+TGG | 0.631477 | 8_1:+84186251 | Msa1220830:CDS |
| TAAATGTGTATCCCTTGGTG+TGG | 0.636452 | 8_1:-84186555 | None:intergenic |
| GTCACCATCTGAGAAGACGC+AGG | 0.644495 | 8_1:+84187188 | Msa1220830:CDS |
| GTCAAGTAGAGCCTGAGGAA+CGG | 0.645293 | 8_1:+84186804 | Msa1220830:CDS |
| AAGCCTTTGAAGAATGACAA+TGG | 0.648926 | 8_1:+84186467 | Msa1220830:CDS |
| GTGTAGCATCGTCCACACCA+AGG | 0.650640 | 8_1:+84186543 | Msa1220830:CDS |
| TCACCATCTGAGAAGACGCA+GGG | 0.650947 | 8_1:+84187189 | Msa1220830:CDS |
| CTTAAGAGACCTGTGTCAGG+AGG | 0.654168 | 8_1:-84187223 | None:intergenic |
| ATAGGCACCATGAGATTGCG+AGG | 0.657532 | 8_1:+84185090 | Msa1220830:CDS |
| AGTGGAAATGCAGGGCACAA+AGG | 0.658295 | 8_1:-84185200 | None:intergenic |
| AGATTGCGAGGCTTAACCCG+AGG | 0.660519 | 8_1:+84185102 | Msa1220830:CDS |
| CAGAACCGCCCTCATAACCC+AGG | 0.660881 | 8_1:-84186874 | None:intergenic |
| AACAAGAACATCAAATCCAG+GGG | 0.675043 | 8_1:-84186831 | None:intergenic |
| AAGAACATCAAATCCAGGGG+AGG | 0.679312 | 8_1:-84186828 | None:intergenic |
| AACTGAATGAGCAATACTTG+GGG | 0.681764 | 8_1:+84186930 | Msa1220830:CDS |
| TGCAACGGCAAACAAGACAA+TGG | 0.690022 | 8_1:+84186139 | Msa1220830:CDS |
| AAAGGCAAGACATTGGTCAG+CGG | 0.696430 | 8_1:+84187293 | Msa1220830:CDS |
| GACTCTCCATTACCAGACGA+CGG | 0.716277 | 8_1:+84186722 | Msa1220830:CDS |
| CCATCTGAGAAGACGCAGGG+AGG | 0.719477 | 8_1:+84187192 | Msa1220830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGGAATAAATATAATTTTT+TGG | + | chr8_1:84185601-84185620 | Msa1220830:intron | 10.0% |
| !! | AAAAAAATGAATATGAAATT+TGG | - | chr8_1:84185989-84186008 | None:intergenic | 10.0% |
| !!! | AATTCTGTTTTTGTTTTTAA+TGG | + | chr8_1:84184996-84185015 | Msa1220830:intron | 15.0% |
| !! | AAAATATCAAATTAATGAAC+AGG | + | chr8_1:84185888-84185907 | Msa1220830:intron | 15.0% |
| !! | CGAAATAGAAAAGAAAATAT+GGG | - | chr8_1:84184850-84184869 | None:intergenic | 20.0% |
| !! | ACGAAATAGAAAAGAAAATA+TGG | - | chr8_1:84184851-84184870 | None:intergenic | 20.0% |
| !!! | TTGAAAATGTTGTAATCTTT+TGG | + | chr8_1:84185263-84185282 | Msa1220830:intron | 20.0% |
| !!! | TAAATTTTTGTTCTGTAAGT+AGG | + | chr8_1:84185510-84185529 | Msa1220830:intron | 20.0% |
| !! | TGTTTCTTAAAATATCAAGT+TGG | + | chr8_1:84185652-84185671 | Msa1220830:intron | 20.0% |
| !!! | TTTTATATATTGTTTGCATC+TGG | + | chr8_1:84185794-84185813 | Msa1220830:intron | 20.0% |
| !! | AAATGAATATGAAATTTGGA+GGG | - | chr8_1:84185985-84186004 | None:intergenic | 20.0% |
| !! | AAAATGAATATGAAATTTGG+AGG | - | chr8_1:84185986-84186005 | None:intergenic | 20.0% |
| ! | GTATAGCAGTAAAAAAAAAC+TGG | + | chr8_1:84185355-84185374 | Msa1220830:intron | 25.0% |
| ! | AAATCATCAAAACACTTACA+AGG | - | chr8_1:84185825-84185844 | None:intergenic | 25.0% |
| !!! | TGTAAGTGTTTTGATGATTT+TGG | + | chr8_1:84185825-84185844 | Msa1220830:intron | 25.0% |
| ! | TTCATCCAAGAAAACAAATA+AGG | - | chr8_1:84185853-84185872 | None:intergenic | 25.0% |
| ! | AATGAATATGAAATTTGGAG+GGG | - | chr8_1:84185984-84186003 | None:intergenic | 25.0% |
| ! | CAGATAGATTAATACTAAAC+AGG | - | chr8_1:84186019-84186038 | None:intergenic | 25.0% |
| ! | AAAATTAGATGAAAGTGAAG+AGG | - | chr8_1:84186052-84186071 | None:intergenic | 25.0% |
| ! | AATAAACCCAACTTAGAAAA+TGG | + | chr8_1:84186497-84186516 | Msa1220830:CDS | 25.0% |
| !!! | TGTTTAATATTTTCGGGTAA+TGG | - | chr8_1:84186641-84186660 | None:intergenic | 25.0% |
| !!! | ACCTTGCTGTTTAATATTTT+CGG | - | chr8_1:84186648-84186667 | None:intergenic | 25.0% |
| ! | TTGCTTCAAAATTTCTTCTT+TGG | + | chr8_1:84186670-84186689 | Msa1220830:CDS | 25.0% |
| !!! | ATGATTACAGATGTTTTGAT+AGG | + | chr8_1:84187029-84187048 | Msa1220830:CDS | 25.0% |
| !!! | TGATTACAGATGTTTTGATA+GGG | + | chr8_1:84187030-84187049 | Msa1220830:CDS | 25.0% |
| !! | TCTTAGATACTATATTTTCC+AGG | + | chr8_1:84187104-84187123 | Msa1220830:CDS | 25.0% |
| !! | ATACTATATTTTCCAGGAAA+AGG | + | chr8_1:84187110-84187129 | Msa1220830:CDS | 25.0% |
| !! | TTTTCTTTATAGTGCTTTCT+TGG | - | chr8_1:84187427-84187446 | None:intergenic | 25.0% |
| ! | ATAAAGAAAAACCAGCTAAA+CGG | + | chr8_1:84187437-84187456 | Msa1220830:CDS | 25.0% |
| TCGAAAATGTGACGAAAATA+GGG | - | chr8_1:84184890-84184909 | None:intergenic | 30.0% | |
| ATCGAAAATGTGACGAAAAT+AGG | - | chr8_1:84184891-84184910 | None:intergenic | 30.0% | |
| GAAAATGTAACCTAACTGAA+CGG | - | chr8_1:84184937-84184956 | None:intergenic | 30.0% | |
| CCTGCAAACAAAATAAACAA+CGG | - | chr8_1:84185055-84185074 | None:intergenic | 30.0% | |
| !!! | CGTTGTTTATTTTGTTTGCA+GGG | + | chr8_1:84185053-84185072 | Msa1220830:intron | 30.0% |
| !! | ATTGTTGGTATTGGTTATCT+GGG | + | chr8_1:84185126-84185145 | Msa1220830:CDS | 30.0% |
| AAGGTAATGAAAAACTCACA+GGG | - | chr8_1:84185184-84185203 | None:intergenic | 30.0% | |
| AAAGGTAATGAAAAACTCAC+AGG | - | chr8_1:84185185-84185204 | None:intergenic | 30.0% | |
| !! | AAAAAGTACCAAATGAGAAG+TGG | - | chr8_1:84185221-84185240 | None:intergenic | 30.0% |
| GGTTCAATGTGTTAGATTAA+AGG | + | chr8_1:84185318-84185337 | Msa1220830:intron | 30.0% | |
| TAAGAAACATTACAAACGTG+AGG | - | chr8_1:84185389-84185408 | None:intergenic | 30.0% | |
| !! | TGAACGTCTTTGTGTTTTAA+TGG | + | chr8_1:84185420-84185439 | Msa1220830:intron | 30.0% |
| ! | ATTTTTGTTCTGTAAGTAGG+TGG | + | chr8_1:84185513-84185532 | Msa1220830:intron | 30.0% |
| ! | TTTTTGTTCTGTAAGTAGGT+GGG | + | chr8_1:84185514-84185533 | Msa1220830:intron | 30.0% |
| !! | TGGTTCCTTATTTGTTTTCT+TGG | + | chr8_1:84185845-84185864 | Msa1220830:intron | 30.0% |
| ATGAATATGAAATTTGGAGG+GGG | - | chr8_1:84185983-84186002 | None:intergenic | 30.0% | |
| ACAATCTTCATTACATGCAA+CGG | + | chr8_1:84186124-84186143 | Msa1220830:CDS | 30.0% | |
| CCATTGAAGAAAAAGTAACA+GGG | - | chr8_1:84186167-84186186 | None:intergenic | 30.0% | |
| !!! | CCTGTTACTTTTTCTTCAAT+GGG | + | chr8_1:84186165-84186184 | Msa1220830:CDS | 30.0% |
| TTTGCAGAGTCATTCTTTAA+AGG | - | chr8_1:84186329-84186348 | None:intergenic | 30.0% | |
| TTTGCAGAGTCATTCTTTAA+AGG | - | chr8_1:84186329-84186348 | None:intergenic | 30.0% | |
| ! | TTAATATCGGACAAAGCTTT+TGG | - | chr8_1:84186599-84186618 | None:intergenic | 30.0% |
| !!! | CCTTGCTGTTTAATATTTTC+GGG | - | chr8_1:84186647-84186666 | None:intergenic | 30.0% |
| TTCTTGTTCATGATGAATCT+GGG | + | chr8_1:84186846-84186865 | Msa1220830:CDS | 30.0% | |
| ! | ATTTTACTAGTCCTAGTGAA+AGG | + | chr8_1:84187053-84187072 | Msa1220830:CDS | 30.0% |
| AGAAGATTAACATCACAAGT+AGG | + | chr8_1:84187322-84187341 | Msa1220830:CDS | 30.0% | |
| ! | AGAAATCCAATGCATTTTCA+GGG | + | chr8_1:84187518-84187537 | Msa1220830:CDS | 30.0% |
| !! | TTTATTTCTGCAAGAGTCTT+GGG | - | chr8_1:84187544-84187563 | None:intergenic | 30.0% |
| !!! | TTTTATTTCTGCAAGAGTCT+TGG | - | chr8_1:84187545-84187564 | None:intergenic | 30.0% |
| AAAGAAGAGAAGAAAAAGTC+CGG | + | chr8_1:84187562-84187581 | Msa1220830:CDS | 30.0% | |
| AGAATTTCATTCAGAGGTTT+GGG | - | chr8_1:84187631-84187650 | None:intergenic | 30.0% | |
| ! | TCTTTGAGAATTTCATTCAG+AGG | - | chr8_1:84187637-84187656 | None:intergenic | 30.0% |
| TGAATGAAATTCTCAAAGAC+AGG | + | chr8_1:84187638-84187657 | Msa1220830:CDS | 30.0% | |
| AGCCAAGAAATAAACGCAAT+CGG | - | chr8_1:84184768-84184787 | None:intergenic | 35.0% | |
| !!! | CCGTTGTTTATTTTGTTTGC+AGG | + | chr8_1:84185052-84185071 | Msa1220830:intron | 35.0% |
| !! | GATTGTTGGTATTGGTTATC+TGG | + | chr8_1:84185125-84185144 | Msa1220830:CDS | 35.0% |
| AAATGAGAAGTGGAAATGCA+GGG | - | chr8_1:84185211-84185230 | None:intergenic | 35.0% | |
| !!! | TCTTTTGGACTTAATTTGCG+CGG | + | chr8_1:84185278-84185297 | Msa1220830:intron | 35.0% |
| ! | TTTTGTTCTGTAAGTAGGTG+GGG | + | chr8_1:84185515-84185534 | Msa1220830:intron | 35.0% |
| ! | TTCCATTGACAAGAAAGTAC+AGG | - | chr8_1:84185587-84185606 | None:intergenic | 35.0% |
| TTTGTCCAATTGTTGAGTCA+GGG | - | chr8_1:84185758-84185777 | None:intergenic | 35.0% | |
| ! | TTTTGTCCAATTGTTGAGTC+AGG | - | chr8_1:84185759-84185778 | None:intergenic | 35.0% |
| ! | TTTGTAATTTTGTCAGCCTG+TGG | + | chr8_1:84186070-84186089 | Msa1220830:intron | 35.0% |
| !!! | CCCTGTTACTTTTTCTTCAA+TGG | + | chr8_1:84186164-84186183 | Msa1220830:CDS | 35.0% |
| CCCATTGAAGAAAAAGTAAC+AGG | - | chr8_1:84186168-84186187 | None:intergenic | 35.0% | |
| !! | TTCAATGGGTTTTGCAACAA+AGG | + | chr8_1:84186179-84186198 | Msa1220830:CDS | 35.0% |
| !! | AGCAAATGCTCATTTTTGCA+TGG | + | chr8_1:84186203-84186222 | Msa1220830:CDS | 35.0% |
| TTTGCAGAGTCATTCTTCAA+AGG | - | chr8_1:84186305-84186324 | None:intergenic | 35.0% | |
| TTTGCAGTGTCAATCTTCAA+AGG | - | chr8_1:84186377-84186396 | None:intergenic | 35.0% | |
| TTCACAGTGTCAATCTTCAA+AGG | - | chr8_1:84186425-84186444 | None:intergenic | 35.0% | |
| TTCACAGTGTCAATCTTCAA+AGG | - | chr8_1:84186425-84186444 | None:intergenic | 35.0% | |
| ! | AAGCCTTTGAAGAATGACAA+TGG | + | chr8_1:84186467-84186486 | Msa1220830:CDS | 35.0% |
| CTTCCATTGTCATTCTTCAA+AGG | - | chr8_1:84186473-84186492 | None:intergenic | 35.0% | |
| ! | GCAGTTCCATTTTCTAAGTT+GGG | - | chr8_1:84186506-84186525 | None:intergenic | 35.0% |
| ! | TGCAGTTCCATTTTCTAAGT+TGG | - | chr8_1:84186507-84186526 | None:intergenic | 35.0% |
| CTTAGAAAATGGAACTGCAT+CGG | + | chr8_1:84186508-84186527 | Msa1220830:CDS | 35.0% | |
| TTAGAAAATGGAACTGCATC+GGG | + | chr8_1:84186509-84186528 | Msa1220830:CDS | 35.0% | |
| TGGTTTAAATGTGTATCCCT+TGG | - | chr8_1:84186563-84186582 | None:intergenic | 35.0% | |
| !!! | CTTTTGGAGCAGATAAAGAT+TGG | - | chr8_1:84186583-84186602 | None:intergenic | 35.0% |
| CTTAGGCTGAGGTTTAATAT+CGG | - | chr8_1:84186612-84186631 | None:intergenic | 35.0% | |
| CCCGAAAATATTAAACAGCA+AGG | + | chr8_1:84186644-84186663 | Msa1220830:CDS | 35.0% | |
| AACAAGAACATCAAATCCAG+GGG | - | chr8_1:84186834-84186853 | None:intergenic | 35.0% | |
| GAACAAGAACATCAAATCCA+GGG | - | chr8_1:84186835-84186854 | None:intergenic | 35.0% | |
| TGAACAAGAACATCAAATCC+AGG | - | chr8_1:84186836-84186855 | None:intergenic | 35.0% | |
| GTTCTTGTTCATGATGAATC+TGG | + | chr8_1:84186845-84186864 | Msa1220830:CDS | 35.0% | |
| ATATTTGCCAGTGCTTGATA+TGG | + | chr8_1:84186898-84186917 | Msa1220830:CDS | 35.0% | |
| AGTATTGCTCATTCAGTTCA+TGG | - | chr8_1:84186928-84186947 | None:intergenic | 35.0% | |
| TGAACTGAATGAGCAATACT+TGG | + | chr8_1:84186928-84186947 | Msa1220830:CDS | 35.0% | |
| GAACTGAATGAGCAATACTT+GGG | + | chr8_1:84186929-84186948 | Msa1220830:CDS | 35.0% | |
| AACTGAATGAGCAATACTTG+GGG | + | chr8_1:84186930-84186949 | Msa1220830:CDS | 35.0% | |
| CGCTGATATTCTTTATGAAC+AGG | + | chr8_1:84186997-84187016 | Msa1220830:CDS | 35.0% | |
| ! | CTTCTTTGATGGTTCAAAAC+CGG | + | chr8_1:84187260-84187279 | Msa1220830:CDS | 35.0% |
| ! | TTCTTTGATGGTTCAAAACC+GGG | + | chr8_1:84187261-84187280 | Msa1220830:CDS | 35.0% |
| TTTCAATTGCCAACAAGCAA+AGG | + | chr8_1:84187374-84187393 | Msa1220830:CDS | 35.0% | |
| ! | GATTCTTTAGAAGGAGGAAA+TGG | - | chr8_1:84187463-84187482 | None:intergenic | 35.0% |
| ! | CAGAAATCCAATGCATTTTC+AGG | + | chr8_1:84187517-84187536 | Msa1220830:CDS | 35.0% |
| TTCACAATGTGAACTTTCAC+CGG | - | chr8_1:84187584-84187603 | None:intergenic | 35.0% | |
| GAGAATTTCATTCAGAGGTT+TGG | - | chr8_1:84187632-84187651 | None:intergenic | 35.0% | |
| ! | CACCGATTGCGTTTATTTCT+TGG | + | chr8_1:84184763-84184782 | Msa1220830:CDS | 40.0% |
| TTGAACCTTCTTGCAAGTGA+GGG | - | chr8_1:84184795-84184814 | None:intergenic | 40.0% | |
| ATTGAACCTTCTTGCAAGTG+AGG | - | chr8_1:84184796-84184815 | None:intergenic | 40.0% | |
| ATTGAATTCGCGATTGCGAA+GGG | - | chr8_1:84184826-84184845 | None:intergenic | 40.0% | |
| AATTGAATTCGCGATTGCGA+AGG | - | chr8_1:84184827-84184846 | None:intergenic | 40.0% | |
| !! | GCTTTTGTTTCCGTTCAGTT+AGG | + | chr8_1:84184924-84184943 | Msa1220830:intron | 40.0% |
| AGGGTGTAGAATGTGAGTAT+AGG | + | chr8_1:84185072-84185091 | Msa1220830:intron | 40.0% | |
| AACCAATACCAACAATCCCT+CGG | - | chr8_1:84185122-84185141 | None:intergenic | 40.0% | |
| CAAATGAGAAGTGGAAATGC+AGG | - | chr8_1:84185212-84185231 | None:intergenic | 40.0% | |
| CTGCATTTCCACTTCTCATT+TGG | + | chr8_1:84185210-84185229 | Msa1220830:CDS | 40.0% | |
| !!! | TGGTACTTTTTTCGCGTATG+TGG | + | chr8_1:84185230-84185249 | Msa1220830:intron | 40.0% |
| !!! | GGTACTTTTTTCGCGTATGT+GGG | + | chr8_1:84185231-84185250 | Msa1220830:intron | 40.0% |
| !! | TTAATTTGCGCGGTTAGGTT+AGG | + | chr8_1:84185288-84185307 | Msa1220830:intron | 40.0% |
| CATTACAAACGTGAGGACTA+AGG | - | chr8_1:84185382-84185401 | None:intergenic | 40.0% | |
| ! | GCTGAGATGCATTTTACCTA+TGG | + | chr8_1:84185442-84185461 | Msa1220830:intron | 40.0% |
| ! | GAGATGCATTTTACCTATGG+TGG | + | chr8_1:84185445-84185464 | Msa1220830:intron | 40.0% |
| !!! | AGACACTTTTTCCATCACAC+AGG | - | chr8_1:84185472-84185491 | None:intergenic | 40.0% |
| TGCCTGTACTTTCTTGTCAA+TGG | + | chr8_1:84185582-84185601 | Msa1220830:intron | 40.0% | |
| TTGTCCAATTGTTGAGTCAG+GGG | - | chr8_1:84185757-84185776 | None:intergenic | 40.0% | |
| ! | TAATTTTGTCAGCCTGTGGA+TGG | + | chr8_1:84186074-84186093 | Msa1220830:intron | 40.0% |
| GCATGTAATGAAGATTGTGC+AGG | - | chr8_1:84186122-84186141 | None:intergenic | 40.0% | |
| TTTCCAGCGTCATTCTTCAA+AGG | - | chr8_1:84186257-84186276 | None:intergenic | 40.0% | |
| TTTCCAGCGTCATTCTTCAA+AGG | - | chr8_1:84186257-84186276 | None:intergenic | 40.0% | |
| ! | ACTGCAAAGCCTTTGAAGAA+TGG | + | chr8_1:84186389-84186408 | Msa1220830:CDS | 40.0% |
| TTTGCAGAGCCATTCTTCAA+AGG | - | chr8_1:84186401-84186420 | None:intergenic | 40.0% | |
| TAAATGTGTATCCCTTGGTG+TGG | - | chr8_1:84186558-84186577 | None:intergenic | 40.0% | |
| CGATATTAAACCTCAGCCTA+AGG | + | chr8_1:84186610-84186629 | Msa1220830:CDS | 40.0% | |
| ATAAAGAAGCTGCTGTGACT+CGG | + | chr8_1:84186696-84186715 | Msa1220830:CDS | 40.0% | |
| AAATAGTCAAGTAGAGCCTG+AGG | + | chr8_1:84186799-84186818 | Msa1220830:CDS | 40.0% | |
| CCACAAACTTTCCTTTCACT+AGG | - | chr8_1:84187067-84187086 | None:intergenic | 40.0% | |
| CCTAGTGAAAGGAAAGTTTG+TGG | + | chr8_1:84187064-84187083 | Msa1220830:CDS | 40.0% | |
| ! | GTATCTAAGACCATCTCTCT+GGG | - | chr8_1:84187094-84187113 | None:intergenic | 40.0% |
| ! | AGTATCTAAGACCATCTCTC+TGG | - | chr8_1:84187095-84187114 | None:intergenic | 40.0% |
| ACATGAGTCGTCTTCTTTGA+TGG | + | chr8_1:84187249-84187268 | Msa1220830:CDS | 40.0% | |
| CCTGAATAACCTTTGCTTGT+TGG | - | chr8_1:84187386-84187405 | None:intergenic | 40.0% | |
| CCAACAAGCAAAGGTTATTC+AGG | + | chr8_1:84187383-84187402 | Msa1220830:CDS | 40.0% | |
| ! | TTCCTCCTTCTAAAGAATCC+AGG | + | chr8_1:84187464-84187483 | Msa1220830:CDS | 40.0% |
| ! | TTCCTGGATTCTTTAGAAGG+AGG | - | chr8_1:84187469-84187488 | None:intergenic | 40.0% |
| GGTTTCCTGGATTCTTTAGA+AGG | - | chr8_1:84187472-84187491 | None:intergenic | 40.0% | |
| ! | TTGCTTCACAATTGGTTTCC+TGG | - | chr8_1:84187485-84187504 | None:intergenic | 40.0% |
| ! | GATCTCTGTTGCTTCACAAT+TGG | - | chr8_1:84187493-84187512 | None:intergenic | 40.0% |
| TGTTCGTTACACTGAGAGAG+AGG | - | chr8_1:84184718-84184737 | None:intergenic | 45.0% | |
| CTCTCTCAGTGTAACGAACA+TGG | + | chr8_1:84184718-84184737 | Msa1220830:exon | 45.0% | |
| TGAACCTTCTTGCAAGTGAG+GGG | - | chr8_1:84184794-84184813 | None:intergenic | 45.0% | |
| ACCAATACCAACAATCCCTC+GGG | - | chr8_1:84185121-84185140 | None:intergenic | 45.0% | |
| ! | GGGTGTCTAAAAGCACAAGT+TGG | - | chr8_1:84185164-84185183 | None:intergenic | 45.0% |
| !! | TGGACTTAATTTGCGCGGTT+AGG | + | chr8_1:84185283-84185302 | Msa1220830:intron | 45.0% |
| ! | GCGGTTAGGTTAGGTTTTTG+TGG | + | chr8_1:84185297-84185316 | Msa1220830:intron | 45.0% |
| TGTCCAATTGTTGAGTCAGG+GGG | - | chr8_1:84185756-84185775 | None:intergenic | 45.0% | |
| ATGAAATTTGGAGGGGGAGT+GGG | - | chr8_1:84185977-84185996 | None:intergenic | 45.0% | |
| TATGAAATTTGGAGGGGGAG+TGG | - | chr8_1:84185978-84185997 | None:intergenic | 45.0% | |
| GAAGATTGTGCAGGTTCAGA+TGG | - | chr8_1:84186113-84186132 | None:intergenic | 45.0% | |
| TGCAACGGCAAACAAGACAA+TGG | + | chr8_1:84186139-84186158 | Msa1220830:CDS | 45.0% | |
| ! | AAGCCTTTGAAGAATGACGC+TGG | + | chr8_1:84186251-84186270 | Msa1220830:CDS | 45.0% |
| ! | AAGCCTTTGAAGAATGACGC+TGG | + | chr8_1:84186251-84186270 | Msa1220830:CDS | 45.0% |
| GAACTCTGCTCAGTGAATGA+AGG | - | chr8_1:84186767-84186786 | None:intergenic | 45.0% | |
| ATTCACTGAGCAGAGTTCAG+AGG | + | chr8_1:84186769-84186788 | Msa1220830:CDS | 45.0% | |
| AAGAACATCAAATCCAGGGG+AGG | - | chr8_1:84186831-84186850 | None:intergenic | 45.0% | |
| TGATGAATCTGGGAACAACC+TGG | + | chr8_1:84186856-84186875 | Msa1220830:CDS | 45.0% | |
| GATGAATCTGGGAACAACCT+GGG | + | chr8_1:84186857-84186876 | Msa1220830:CDS | 45.0% | |
| TGGTCATCCATATCAAGCAC+TGG | - | chr8_1:84186908-84186927 | None:intergenic | 45.0% | |
| GATTACGACACTATGTGCTC+AGG | + | chr8_1:84186974-84186993 | Msa1220830:CDS | 45.0% | |
| TTGTGGTTATCCCAGAGAGA+TGG | + | chr8_1:84187081-84187100 | Msa1220830:CDS | 45.0% | |
| ! | GGACATTCGAATCCTTTTCC+TGG | - | chr8_1:84187125-84187144 | None:intergenic | 45.0% |
| ! | TCGAATGTCCACTTCTGAGA+TGG | + | chr8_1:84187135-84187154 | Msa1220830:CDS | 45.0% |
| CTTCTTAAGAGACCTGTGTC+AGG | - | chr8_1:84187229-84187248 | None:intergenic | 45.0% | |
| TGATGGTTCAAAACCGGGAA+AGG | + | chr8_1:84187266-84187285 | Msa1220830:CDS | 45.0% | |
| !! | AAAACCGGGAAAGGCATCAA+AGG | + | chr8_1:84187275-84187294 | Msa1220830:CDS | 45.0% |
| AGGCATCAAAGGCAAGACAT+TGG | + | chr8_1:84187286-84187305 | Msa1220830:CDS | 45.0% | |
| AAAGGCAAGACATTGGTCAG+CGG | + | chr8_1:84187293-84187312 | Msa1220830:CDS | 45.0% | |
| TTCACCCCTCACTTGCAAGA+AGG | + | chr8_1:84184787-84184806 | Msa1220830:CDS | 50.0% | |
| ATAGGCACCATGAGATTGCG+AGG | + | chr8_1:84185090-84185109 | Msa1220830:CDS | 50.0% | |
| GGTTAAGCCTCGCAATCTCA+TGG | - | chr8_1:84185100-84185119 | None:intergenic | 50.0% | |
| ACCCGAGGGATTGTTGGTAT+TGG | + | chr8_1:84185117-84185136 | Msa1220830:CDS | 50.0% | |
| AGTGGAAATGCAGGGCACAA+AGG | - | chr8_1:84185203-84185222 | None:intergenic | 50.0% | |
| GTTCTGTAAGTAGGTGGGGA+TGG | + | chr8_1:84185519-84185538 | Msa1220830:intron | 50.0% | |
| TGTTGAGTCAGGGGGACAAT+GGG | - | chr8_1:84185748-84185767 | None:intergenic | 50.0% | |
| TTGTTGAGTCAGGGGGACAA+TGG | - | chr8_1:84185749-84185768 | None:intergenic | 50.0% | |
| TGTCCCCCTGACTCAACAAT+TGG | + | chr8_1:84185750-84185769 | Msa1220830:intron | 50.0% | |
| TGAAATTTGGAGGGGGAGTG+GGG | - | chr8_1:84185976-84185995 | None:intergenic | 50.0% | |
| ACAGTGAGCGAGCTATCATC+AGG | - | chr8_1:84186230-84186249 | None:intergenic | 50.0% | |
| TGTAGCATCGTCCACACCAA+GGG | + | chr8_1:84186544-84186563 | Msa1220830:CDS | 50.0% | |
| AATGGTAGCACCTTAGGCTG+AGG | - | chr8_1:84186623-84186642 | None:intergenic | 50.0% | |
| ! | TCGGGTAATGGTAGCACCTT+AGG | - | chr8_1:84186629-84186648 | None:intergenic | 50.0% |
| GACTCTCCATTACCAGACGA+CGG | + | chr8_1:84186722-84186741 | Msa1220830:CDS | 50.0% | |
| GTCAAGTAGAGCCTGAGGAA+CGG | + | chr8_1:84186804-84186823 | Msa1220830:CDS | 50.0% | |
| TGGGAACAACCTGGGTTATG+AGG | + | chr8_1:84186865-84186884 | Msa1220830:CDS | 50.0% | |
| GGGAACAACCTGGGTTATGA+GGG | + | chr8_1:84186866-84186885 | Msa1220830:CDS | 50.0% | |
| AACAACCTGGGTTATGAGGG+CGG | + | chr8_1:84186869-84186888 | Msa1220830:CDS | 50.0% | |
| ACAAGCAGCCATCTCAGAAG+TGG | - | chr8_1:84187146-84187165 | None:intergenic | 50.0% | |
| TCACCATCTGAGAAGACGCA+GGG | + | chr8_1:84187189-84187208 | Msa1220830:CDS | 50.0% | |
| GTCAATAGTCCTCCTGACAC+AGG | + | chr8_1:84187214-84187233 | Msa1220830:CDS | 50.0% | |
| CTTAAGAGACCTGTGTCAGG+AGG | - | chr8_1:84187226-84187245 | None:intergenic | 50.0% | |
| CTTGCCTTTGATGCCTTTCC+CGG | - | chr8_1:84187282-84187301 | None:intergenic | 50.0% | |
| TCAGGCCTTACCAGCAAAGT+AGG | + | chr8_1:84187401-84187420 | Msa1220830:CDS | 50.0% | |
| CTTGGCCTACTTTGCTGGTA+AGG | - | chr8_1:84187409-84187428 | None:intergenic | 50.0% | |
| GCTTTCTTGGCCTACTTTGC+TGG | - | chr8_1:84187414-84187433 | None:intergenic | 50.0% | |
| CTTGGGCCCTGAAAATGCAT+TGG | - | chr8_1:84187527-84187546 | None:intergenic | 50.0% | |
| CATTGTGAAAGCTCGTCAGC+TGG | + | chr8_1:84187595-84187614 | Msa1220830:CDS | 50.0% | |
| ! | CATTCAGAGGTTTGGGATCC+TGG | - | chr8_1:84187624-84187643 | None:intergenic | 50.0% |
| AGATTGCGAGGCTTAACCCG+AGG | + | chr8_1:84185102-84185121 | Msa1220830:CDS | 55.0% | |
| GATTGCGAGGCTTAACCCGA+GGG | + | chr8_1:84185103-84185122 | Msa1220830:CDS | 55.0% | |
| GGCTTAACCCGAGGGATTGT+TGG | + | chr8_1:84185111-84185130 | Msa1220830:CDS | 55.0% | |
| CCATCACACAGGTCCACCAT+AGG | - | chr8_1:84185461-84185480 | None:intergenic | 55.0% | |
| !! | CCTATGGTGGACCTGTGTGA+TGG | + | chr8_1:84185458-84185477 | Msa1220830:intron | 55.0% |
| AAGTAGGTGGGGATGGTGCA+AGG | + | chr8_1:84185526-84185545 | Msa1220830:intron | 55.0% | |
| ACTCCAGTGTGTCCATCCAC+AGG | - | chr8_1:84186089-84186108 | None:intergenic | 55.0% | |
| GTGTAGCATCGTCCACACCA+AGG | + | chr8_1:84186543-84186562 | Msa1220830:CDS | 55.0% | |
| TTATGAGCAACGCCGTCGTC+TGG | - | chr8_1:84186737-84186756 | None:intergenic | 55.0% | |
| GTCACCATCTGAGAAGACGC+AGG | + | chr8_1:84187188-84187207 | Msa1220830:CDS | 55.0% | |
| GGAGGAAATGGCCGTTTAGC+TGG | - | chr8_1:84187451-84187470 | None:intergenic | 55.0% | |
| ! | AAGCTCGTCAGCTGGTTTCC+AGG | + | chr8_1:84187603-84187622 | Msa1220830:CDS | 55.0% |
| CAGCCTGTGGATGGACACAC+TGG | + | chr8_1:84186083-84186102 | Msa1220830:intron | 60.0% | |
| GCAACGCCGTCGTCTGGTAA+TGG | - | chr8_1:84186731-84186750 | None:intergenic | 60.0% | |
| CAGAACCGCCCTCATAACCC+AGG | - | chr8_1:84186877-84186896 | None:intergenic | 60.0% | |
| CCTCCCTGCGTCTTCTCAGA+TGG | - | chr8_1:84187195-84187214 | None:intergenic | 60.0% | |
| CCATCTGAGAAGACGCAGGG+AGG | + | chr8_1:84187192-84187211 | Msa1220830:CDS | 60.0% | |
| CCAGGGGAGGACCGTTCCTC+AGG | - | chr8_1:84186818-84186837 | None:intergenic | 70.0% | |
| CCTGAGGAACGGTCCTCCCC+TGG | + | chr8_1:84186815-84186834 | Msa1220830:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 84184646 | 84187672 | 84184646 | ID=Msa1220830;Name=Msa1220830 |
| chr8_1 | mRNA | 84184646 | 84187672 | 84184646 | ID=Msa1220830-mRNA-1;Parent=Msa1220830;Name=Msa1220830-mRNA-1;_AED=0.01;_eAED=0.01;_QI=91|0.33|0.25|0.75|1|1|4|0|612 |
| chr8_1 | exon | 84184646 | 84184808 | 84184646 | ID=Msa1220830-mRNA-1:exon:30178;Parent=Msa1220830-mRNA-1 |
| chr8_1 | exon | 84185074 | 84185244 | 84185074 | ID=Msa1220830-mRNA-1:exon:30179;Parent=Msa1220830-mRNA-1 |
| chr8_1 | exon | 84185532 | 84185540 | 84185532 | ID=Msa1220830-mRNA-1:exon:30180;Parent=Msa1220830-mRNA-1 |
| chr8_1 | exon | 84186086 | 84187672 | 84186086 | ID=Msa1220830-mRNA-1:exon:30181;Parent=Msa1220830-mRNA-1 |
| chr8_1 | five_prime_UTR | 84184646 | 84184736 | 84184646 | ID=Msa1220830-mRNA-1:five_prime_utr;Parent=Msa1220830-mRNA-1 |
| chr8_1 | CDS | 84184737 | 84184808 | 84184737 | ID=Msa1220830-mRNA-1:cds;Parent=Msa1220830-mRNA-1 |
| chr8_1 | CDS | 84185074 | 84185244 | 84185074 | ID=Msa1220830-mRNA-1:cds;Parent=Msa1220830-mRNA-1 |
| chr8_1 | CDS | 84185532 | 84185540 | 84185532 | ID=Msa1220830-mRNA-1:cds;Parent=Msa1220830-mRNA-1 |
| chr8_1 | CDS | 84186086 | 84187672 | 84186086 | ID=Msa1220830-mRNA-1:cds;Parent=Msa1220830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
