AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1222770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1222770 MtrunA17_Chr4g0074401 69.637 606 151 5 1 583 1 596 0.0 813
Msa1222770 MtrunA17_Chr4g0074411 69.012 597 159 5 1 578 2 591 0.0 791
Msa1222770 MtrunA17_Chr2g0304841 39.940 671 282 22 2 574 3 650 1.98e-119 369
Msa1222770 MtrunA17_Chr4g0074421 91.005 189 10 1 66 254 1 182 2.15e-110 328
Msa1222770 MtrunA17_Chr3g0137101 50.751 333 141 7 14 330 5 330 1.22e-89 290
Msa1222770 MtrunA17_Chr1g0149841 47.110 346 145 7 13 330 1 336 6.84e-89 283
Msa1222770 MtrunA17_Chr1g0161431 53.307 257 103 6 17 264 11 259 9.38e-81 266
Msa1222770 MtrunA17_Chr1g0149851 45.588 340 149 7 13 319 1 337 1.03e-78 258
Msa1222770 MtrunA17_Chr4g0067981 43.850 374 167 11 14 357 25 385 1.73e-78 261
Msa1222770 MtrunA17_Chr3g0123131 52.713 258 102 6 17 265 13 259 3.02e-77 255
Msa1222770 MtrunA17_Chr7g0275891 45.031 322 160 6 13 319 1 320 2.25e-75 243
Msa1222770 MtrunA17_Chr8g0376881 47.636 275 121 6 15 284 23 279 1.32e-74 247
Msa1222770 MtrunA17_Chr2g0294911 42.210 353 185 5 11 357 23 362 1.05e-73 246
Msa1222770 MtrunA17_Chr7g0275401 44.373 311 140 6 13 316 1 285 1.12e-71 232
Msa1222770 MtrunA17_Chr3g0134461 48.117 239 69 4 17 254 8 192 1.58e-54 183
Msa1222770 MtrunA17_Chr1g0149831 49.751 201 82 4 76 267 1 191 2.43e-51 176
Msa1222770 MtrunA17_Chr4g0009851 36.777 242 123 5 16 257 10 221 1.65e-46 166
Msa1222770 MtrunA17_Chr3g0134481 60.769 130 51 0 11 140 2 131 5.70e-46 160
Msa1222770 MtrunA17_Chr3g0134481 51.667 60 22 1 197 256 131 183 9.09e-12 64.3
Msa1222770 MtrunA17_Chr4g0009901 36.122 263 132 5 17 279 10 236 2.23e-44 159
Msa1222770 MtrunA17_Chr6g0471041 34.082 267 136 7 11 268 8 243 1.62e-39 149
Msa1222770 MtrunA17_Chr4g0009981 36.548 197 94 4 62 257 2 168 6.09e-33 127
Msa1222770 MtrunA17_Chr8g0391911 35.246 244 150 5 13 254 5 242 2.93e-30 119
Msa1222770 MtrunA17_Chr8g0350761 29.699 266 153 7 16 257 16 271 4.06e-27 114
Msa1222770 MtrunA17_Chr4g0074431 93.478 46 3 0 1 46 4 49 1.04e-23 94.4
Msa1222770 MtrunA17_Chr3g0127941 32.240 183 112 4 21 194 56 235 2.76e-23 104
Msa1222770 MtrunA17_Chr4g0011071 31.953 169 89 4 63 230 35 178 1.34e-22 95.1
Msa1222770 MtrunA17_Chr8g0383961 28.916 249 122 4 13 261 10 203 2.64e-22 97.1
Msa1222770 MtrunA17_Chr7g0276361 36.090 133 76 2 18 144 11 140 9.80e-22 99.4
Msa1222770 MtrunA17_Chr6g0456631 33.121 157 102 2 13 167 5 160 1.15e-21 92.4
Msa1222770 MtrunA17_Chr6g0473731 34.682 173 88 7 97 269 10 157 1.97e-20 94.4
Msa1222770 MtrunA17_Chr4g0030271 37.705 122 73 1 21 139 89 210 1.30e-19 93.2
Msa1222770 MtrunA17_Chr4g0009991 36.986 146 62 3 109 254 1 116 1.99e-18 81.6
Msa1222770 MtrunA17_Chr1g0181811 34.426 122 77 1 21 139 85 206 2.05e-18 89.4
Msa1222770 MtrunA17_Chr3g0091641 31.579 133 86 2 13 140 14 146 2.64e-18 88.6
Msa1222770 MtrunA17_Chr8g0345901 33.600 125 80 1 23 144 38 162 1.06e-17 86.7
Msa1222770 MtrunA17_Chr4g0061021 30.303 132 87 2 14 140 24 155 5.11e-17 84.3
Msa1222770 MtrunA17_Chr4g0031961 49.451 91 36 3 174 261 104 187 1.04e-16 81.3
Msa1222770 MtrunA17_Chr7g0223971 32.778 180 84 5 108 261 10 178 1.69e-16 82.8
Msa1222770 MtrunA17_Chr5g0400241 38.400 125 71 3 17 139 14 134 1.94e-15 79.3
Msa1222770 MtrunA17_Chr5g0400241 32.075 159 84 4 151 300 264 407 1.43e-13 73.6
Msa1222770 MtrunA17_Chr7g0255711 53.846 65 23 1 197 261 90 147 1.73e-14 74.7
Msa1222770 MtrunA17_Chr4g0054981 34.677 124 77 2 17 139 14 134 3.05e-14 75.5
Msa1222770 MtrunA17_Chr4g0054981 44.828 87 31 2 191 267 303 382 2.30e-13 72.8
Msa1222770 MtrunA17_Chr5g0423031 39.024 82 49 1 16 97 9 89 3.26e-14 71.2
Msa1222770 MtrunA17_Chr4g0010001 38.272 81 49 1 17 97 10 89 2.86e-12 63.2
Msa1222770 MtrunA17_Chr7g0256551 28.662 157 89 3 13 148 1 155 3.75e-12 66.6
Msa1222770 MtrunA17_Chr7g0274471 53.226 62 23 1 196 257 216 271 1.59e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1222770 AT2G25180.1 45.358 377 171 8 17 368 13 379 2.64e-86 280
Msa1222770 AT1G67710.1 53.435 262 107 5 16 271 5 257 1.18e-78 258
Msa1222770 AT4G31920.1 48.923 325 122 8 17 317 13 317 6.99e-78 256
Msa1222770 AT5G58080.1 47.147 333 145 10 7 320 3 323 1.20e-76 255
Msa1222770 AT3G16857.1 45.659 311 137 4 8 294 24 326 1.38e-76 256
Msa1222770 AT3G16857.2 43.109 341 158 5 8 320 24 356 1.98e-76 256
Msa1222770 AT2G01760.1 48.485 264 113 5 17 266 7 261 2.53e-66 221
Msa1222770 AT2G01760.2 43.836 292 113 6 17 266 7 289 3.63e-60 206
Msa1222770 AT3G16857.3 42.321 293 133 5 56 320 2 286 4.45e-60 211
Msa1222770 AT1G67710.2 50.249 201 86 4 76 271 1 192 1.98e-50 181
Msa1222770 AT5G49240.1 40.476 252 131 6 11 254 32 272 8.68e-50 174
Msa1222770 AT2G01760.3 47.291 203 84 5 76 264 1 194 3.00e-43 157
Msa1222770 AT1G49190.1 30.065 306 169 8 17 297 30 315 2.49e-37 143
Msa1222770 AT3G62670.1 37.860 243 128 6 22 257 42 268 3.18e-37 143
Msa1222770 AT1G67710.3 45.556 180 84 4 97 271 13 183 3.62e-36 141
Msa1222770 AT5G07210.2 28.912 294 156 6 21 273 16 297 5.03e-29 122
Msa1222770 AT5G07210.1 28.146 302 156 7 21 273 16 305 1.15e-26 115
Msa1222770 AT2G27070.1 28.912 294 159 9 21 273 16 300 7.66e-26 112
Msa1222770 AT1G49190.2 36.800 125 79 0 17 141 30 154 8.17e-22 100
Msa1222770 AT2G46790.3 38.211 123 71 2 21 139 37 158 1.22e-21 98.6
Msa1222770 AT2G46790.1 38.211 123 71 2 21 139 37 158 1.47e-21 98.6
Msa1222770 AT5G24470.1 36.000 125 75 2 20 140 49 172 1.51e-21 99.0
Msa1222770 AT5G60100.7 38.525 122 72 1 21 139 64 185 2.83e-19 90.9
Msa1222770 AT5G60100.6 38.525 122 72 1 21 139 64 185 2.83e-19 90.9
Msa1222770 AT5G60100.4 38.525 122 72 1 21 139 64 185 2.83e-19 90.9
Msa1222770 AT5G60100.5 38.525 122 72 1 21 139 64 185 4.90e-19 90.9
Msa1222770 AT5G60100.3 38.525 122 72 1 21 139 64 185 4.90e-19 90.9
Msa1222770 AT5G60100.1 38.525 122 72 1 21 139 64 185 4.90e-19 90.9
Msa1222770 AT5G60100.2 38.525 122 72 1 21 139 64 185 9.31e-19 90.1
Msa1222770 AT1G68210.1 23.827 277 170 5 21 264 13 281 2.44e-17 86.3
Msa1222770 AT5G02810.1 34.426 122 77 1 21 139 78 199 4.14e-17 85.5
Msa1222770 AT5G61380.1 31.818 132 85 2 14 140 10 141 1.02e-16 84.0
Msa1222770 AT5G05090.1 47.561 82 36 1 180 261 63 137 1.10e-15 77.8
Msa1222770 AT5G59570.2 38.739 111 59 2 151 261 96 197 1.31e-15 78.2
Msa1222770 AT5G59570.1 38.739 111 59 2 151 261 96 197 1.31e-15 78.2
Msa1222770 AT3G46640.2 53.731 67 24 1 197 263 143 202 2.05e-15 78.2
Msa1222770 AT3G46640.1 53.731 67 24 1 197 263 143 202 2.05e-15 78.2
Msa1222770 AT3G46640.3 53.731 67 24 1 197 263 143 202 3.28e-15 77.4
Msa1222770 AT3G10760.1 51.389 72 28 1 190 261 97 161 4.79e-15 77.0
Msa1222770 AT2G40970.1 53.846 65 23 1 197 261 104 161 4.85e-15 75.5
Msa1222770 AT4G18020.8 34.266 143 85 3 15 150 12 152 1.89e-13 73.6
Msa1222770 AT4G18020.11 34.266 143 85 3 15 150 12 152 1.89e-13 73.6
Msa1222770 AT4G18020.4 34.266 143 85 3 15 150 12 152 1.89e-13 73.6
Msa1222770 AT4G18020.5 34.266 143 85 3 15 150 12 152 1.89e-13 73.6
Msa1222770 AT4G18020.10 34.266 143 85 3 15 150 12 152 1.89e-13 73.6
Msa1222770 AT4G18020.7 34.266 143 85 3 15 150 12 152 1.89e-13 73.6
Msa1222770 AT4G18020.3 34.266 143 85 3 15 150 12 152 2.25e-13 73.2
Msa1222770 AT4G18020.2 34.266 143 85 3 15 150 12 152 2.25e-13 73.2
Msa1222770 AT4G18020.1 34.266 143 85 3 15 150 12 152 2.25e-13 73.2
Msa1222770 AT4G18020.6 34.266 143 85 3 15 150 12 152 2.25e-13 73.2
Msa1222770 AT4G18020.9 34.266 143 85 3 15 150 12 152 2.25e-13 73.2
Msa1222770 AT5G44190.2 53.226 62 22 1 196 257 145 199 1.07e-12 70.1
Msa1222770 AT5G44190.1 53.226 62 22 1 196 257 145 199 1.07e-12 70.5

Find 113 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACATTGGTGTCTCGAAAT+TGG 0.196977 8_1:+87107932 None:intergenic
GATTATCTTGCTTCTTCTAA+TGG 0.232806 8_1:-87107375 Msa1222770:CDS
CCACTTCTGACAGGGTTAAA+AGG 0.242635 8_1:+87107633 None:intergenic
GGACTTAAATTAATGTTATC+AGG 0.249835 8_1:+87107828 None:intergenic
AAGGGTTCAGTAGGTGGATA+TGG 0.252390 8_1:-87108083 Msa1222770:CDS
AAAAGAAGCCTCGTTTAGTT+TGG 0.279239 8_1:-87108585 Msa1222770:CDS
CAATGTCAAGATGGCTTACT+TGG 0.323761 8_1:-87107465 Msa1222770:CDS
TGATTAATGAACTATTAGTT+TGG 0.331944 8_1:+87107322 None:intergenic
CCCGGCGGGTATGCGTGTTC+TGG 0.339385 8_1:-87110981 Msa1222770:CDS
CTCACTCAATGGAACAGAAT+TGG 0.343212 8_1:+87107593 None:intergenic
ATCATTAGTGATGGGGTATA+TGG 0.343848 8_1:-87108724 Msa1222770:CDS
AAAGAAGCCTCGTTTAGTTT+GGG 0.355798 8_1:-87108584 Msa1222770:CDS
CATTCCTTCCAAGTTCAAAC+TGG 0.363583 8_1:+87107998 None:intergenic
GATAAATATTCTGCTGAAAC+TGG 0.368030 8_1:+87107853 None:intergenic
CACACCATCCAGTTTGAACT+TGG 0.369083 8_1:-87108006 Msa1222770:CDS
TATCAAATGGTTATCTAAAC+AGG 0.370425 8_1:-87108141 Msa1222770:CDS
CTTCTCACATGCAACTATAA+TGG 0.375217 8_1:-87110914 Msa1222770:intron
GTTTCTGCAGTTAATCTTGT+CGG 0.381222 8_1:-87108538 Msa1222770:CDS
AACATTGGTGTCTCGAAATT+GGG 0.390536 8_1:+87107933 None:intergenic
ATAAATCACTCTCCTGTTGA+AGG 0.396905 8_1:-87107675 Msa1222770:CDS
GAGCAATTGCTTAATGTAGA+TGG 0.399600 8_1:-87107228 Msa1222770:CDS
GATTAATGAACTATTAGTTT+GGG 0.399970 8_1:+87107323 None:intergenic
TCAGCAAGTCGGACTTGAAA+TGG 0.400458 8_1:-87109010 Msa1222770:CDS
TCCAGCACTTTGAGATAAGT+TGG 0.404451 8_1:+87110944 None:intergenic
AAATGTATCCAGCCATTTGC+AGG 0.408981 8_1:-87108341 Msa1222770:intron
ACTGCATTTGAATCATCAAT+TGG 0.413674 8_1:+87107807 None:intergenic
TCAAGTTGAGAAGTTCTATT+CGG 0.435476 8_1:-87107289 Msa1222770:CDS
ATATAATTTGTACCTGCAAA+TGG 0.440246 8_1:+87108329 None:intergenic
TTCACAGCAGAACCTTCAAC+AGG 0.443727 8_1:+87107663 None:intergenic
TGAATTGTTGAGAGAAAAGA+AGG 0.450895 8_1:-87109094 Msa1222770:CDS
AGCTTGAAGCCATCCATGTC+TGG 0.455651 8_1:+87109036 None:intergenic
GAGAAGTTCTATTCGGATCA+AGG 0.456955 8_1:-87107282 Msa1222770:CDS
ATTCTAGTTCATGATGGTTG+TGG 0.457111 8_1:-87111044 None:intergenic
ACATGGCATTCAAACGTCAA+TGG 0.462461 8_1:-87107883 Msa1222770:CDS
AGAATTGGAAGCAAAGTTAG+AGG 0.465879 8_1:+87107608 None:intergenic
AGGGTTCAGTAGGTGGATAT+GGG 0.469935 8_1:-87108082 Msa1222770:CDS
TACTACAACTACGAAGTCAT+TGG 0.471545 8_1:-87109124 Msa1222770:CDS
TGACAGTGGCTCTGATGTCT+TGG 0.472341 8_1:+87107766 None:intergenic
CTTGACTTGATGAATGTTGA+AGG 0.474751 8_1:-87108376 Msa1222770:CDS
GATACAGAATTGATATCAAA+TGG 0.480940 8_1:-87108154 Msa1222770:CDS
TTAAGCTCTTCCATTCGAAT+CGG 0.481435 8_1:+87108805 None:intergenic
CAAGGAATCATGGAATCAAA+TGG 0.482889 8_1:-87107264 Msa1222770:CDS
TTCAGAATAGTCGTGTGCCT+TGG 0.483059 8_1:-87107200 Msa1222770:CDS
CATCGTTGCTGTTCCGTTGG+AGG 0.483957 8_1:-87107496 Msa1222770:CDS
CATTGCATCGTTTCCTCCAA+CGG 0.484353 8_1:+87107483 None:intergenic
TTCCTCCTTCAACAATACCT+TGG 0.487555 8_1:-87107397 Msa1222770:CDS
AATTTGTACCTGCAAATGGC+TGG 0.488638 8_1:+87108333 None:intergenic
TGGAAGAGCTTAAGAGCATA+TGG 0.489491 8_1:-87108795 Msa1222770:CDS
GTTGGATCCCTACCAGCAAA+AGG 0.495630 8_1:-87108102 Msa1222770:CDS
CAGCCGACAAAACATGTCAT+TGG 0.496819 8_1:+87108031 None:intergenic
TGAATGTTGAAGGGCTTACA+AGG 0.497287 8_1:-87108366 Msa1222770:CDS
TTGTTAAAATCCTCACTCAA+TGG 0.497939 8_1:+87107582 None:intergenic
TAGAAAGAAGATTGAAAGCA+AGG 0.500776 8_1:-87108761 Msa1222770:CDS
TTAGAGGAACCACTTCTGAC+AGG 0.501081 8_1:+87107624 None:intergenic
ATAATCCAAGGTATTGTTGA+AGG 0.508220 8_1:+87107392 None:intergenic
ATCAAGGTATCATTAGTGAT+GGG 0.510346 8_1:-87108732 Msa1222770:CDS
AATCAAGGTATCATTAGTGA+TGG 0.511362 8_1:-87108733 Msa1222770:CDS
TGTGTGATTTATAGTGTTGT+CGG 0.513795 8_1:-87108893 Msa1222770:intron
GAAAGCAAGGATCAAAATCA+AGG 0.515217 8_1:-87108748 Msa1222770:CDS
CCATCCAGTTTGAACTTGGA+AGG 0.517311 8_1:-87108002 Msa1222770:CDS
AATGCAGTTACAGATTCCTC+TGG 0.518088 8_1:-87107792 Msa1222770:CDS
CTTTCACTTTCAGAAAACAT+TGG 0.525109 8_1:+87107918 None:intergenic
TCCAACTTATCTCAAAGTGC+TGG 0.528445 8_1:-87110945 Msa1222770:CDS
TTCTTCAACTATTATTGCAG+AGG 0.539609 8_1:-87108416 Msa1222770:CDS
CAATTCTGTTCCATTGAGTG+AGG 0.541688 8_1:-87107592 Msa1222770:CDS
TGCTAACATCACTAATTACA+AGG 0.543736 8_1:+87109061 None:intergenic
TTCACTTATTGTGTTGTCCA+AGG 0.543954 8_1:+87107183 None:intergenic
CTATTCGGATCAAGGAATCA+TGG 0.544673 8_1:-87107274 Msa1222770:CDS
CAGCAAAAGGGTTCAGTAGG+TGG 0.548262 8_1:-87108089 Msa1222770:CDS
TGGTTATCTAAACAGGATAG+AGG 0.553617 8_1:-87108134 Msa1222770:CDS
GCCAGAACACGCATACCCGC+CGG 0.553676 8_1:+87110980 None:intergenic
ATGGTTGTGGAGGATAGTTT+CGG 0.554649 8_1:-87111031 Msa1222770:CDS
CCTTCCAAGTTCAAACTGGA+TGG 0.554980 8_1:+87108002 None:intergenic
AGACATCGTTGCTGTTCCGT+TGG 0.560284 8_1:-87107499 Msa1222770:CDS
TTAGGAGAAGGTTTCCCGGC+GGG 0.561505 8_1:-87110995 Msa1222770:CDS
ATGTCATTGGATGCATATGC+TGG 0.565239 8_1:+87108044 None:intergenic
TAATGGAGACACTAGTTCCA+TGG 0.565315 8_1:-87107358 Msa1222770:CDS
TTTCAAGTCCGACTTGCTGA+AGG 0.572445 8_1:+87109013 None:intergenic
TTGGATCCCTACCAGCAAAA+GGG 0.576563 8_1:-87108101 Msa1222770:CDS
TTGACTTGATGAATGTTGAA+GGG 0.580486 8_1:-87108375 Msa1222770:CDS
GAAACGATGCAATGTCAAGA+TGG 0.582127 8_1:-87107474 Msa1222770:CDS
GGATAGAGGAGATGATGCGT+TGG 0.582696 8_1:-87108120 Msa1222770:CDS
TTGGGCTAAACTTTGTACCA+TGG 0.585108 8_1:+87107341 None:intergenic
AAGAAAGGTACAAAGTGAGG+AGG 0.585901 8_1:-87108647 Msa1222770:CDS
GAAAGTTCGAGTTCTTTACA+TGG 0.585974 8_1:-87107900 Msa1222770:CDS
TTCAAGCTCCTTCAGCAAGT+CGG 0.589889 8_1:-87109021 Msa1222770:CDS
AACATTTGCATTATTGACAG+TGG 0.591551 8_1:+87107752 None:intergenic
GGGTTCAGTAGGTGGATATG+GGG 0.592030 8_1:-87108081 Msa1222770:CDS
CTAGTTCATGATGGTTGTGG+AGG 0.595087 8_1:-87111041 None:intergenic
AGAAGAAGCAAGATAATCCA+AGG 0.597269 8_1:+87107380 None:intergenic
TGATGTTAGCATGCCAGACA+TGG 0.598210 8_1:-87109049 Msa1222770:CDS
TCTAGTGAAACCGATTCGAA+TGG 0.598674 8_1:-87108815 Msa1222770:CDS
ATGTTATGAGACTGAAGTGG+AGG 0.606395 8_1:+87107957 None:intergenic
GAATAGAACTTCTCAACTTG+AGG 0.607973 8_1:+87107291 None:intergenic
GCTAACAAGAATAAAACGCA+TGG 0.616521 8_1:-87108676 Msa1222770:CDS
GGTAAATGATGATATAGAGA+AGG 0.617327 8_1:-87108872 Msa1222770:CDS
AATGTCAAGATGGCTTACTT+GGG 0.618703 8_1:-87107464 Msa1222770:CDS
TACCAGCAAAAGGGTTCAGT+AGG 0.620378 8_1:-87108092 Msa1222770:CDS
TAGAGGAACCACTTCTGACA+GGG 0.620617 8_1:+87107625 None:intergenic
ATCCAAGGTATTGTTGAAGG+AGG 0.626426 8_1:+87107395 None:intergenic
GTCACATAAACTCACTGTCA+AGG 0.629956 8_1:+87108515 None:intergenic
TCAAGGTATCATTAGTGATG+GGG 0.639460 8_1:-87108731 Msa1222770:CDS
TGTGTGAGCTTACTGATGAA+AGG 0.640199 8_1:+87108982 None:intergenic
TCTGATGTCTTGGAAGCCAG+AGG 0.643398 8_1:+87107776 None:intergenic
CTTAAATTAATGTTATCAGG+CGG 0.647690 8_1:+87107831 None:intergenic
GTTAGCATGCCAGACATGGA+TGG 0.657571 8_1:-87109045 Msa1222770:CDS
TGAGCTTACTGATGAAAGGT+AGG 0.657693 8_1:+87108986 None:intergenic
GTGATGAAGAGTGTGATACA+TGG 0.658673 8_1:-87108850 Msa1222770:CDS
TGTTATGAGACTGAAGTGGA+GGG 0.664363 8_1:+87107958 None:intergenic
GGAATGTTATGAGACTGAAG+TGG 0.672395 8_1:+87107954 None:intergenic
GAATGTTGAAGGGCTTACAA+GGG 0.675399 8_1:-87108365 Msa1222770:CDS
TCATGATCCCAAACTAAACG+AGG 0.706682 8_1:+87108577 None:intergenic
TTTAGGAGAAGGTTTCCCGG+CGG 0.790759 8_1:-87110996 Msa1222770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATGATAGTAAATAAA+TGG + chr8_1:87108571-87108590 None:intergenic 10.0%
!!! TTAAAAAAATCTAAAACAAA+AGG - chr8_1:87108802-87108821 Msa1222770:CDS 10.0%
!!! TAAAAAAATCTAAAACAAAA+GGG - chr8_1:87108803-87108822 Msa1222770:CDS 10.0%
!! CAATTTACTAAAAAAAACTA+AGG + chr8_1:87107487-87107506 None:intergenic 15.0%
!!! CTTAGTTTTTTTTAGTAAAT+TGG - chr8_1:87107485-87107504 Msa1222770:CDS 15.0%
!! AAATAAATGGAAATTATCTT+CGG + chr8_1:87108558-87108577 None:intergenic 15.0%
!!! AAACCTTTTTTTTTTCTTTG+AGG - chr8_1:87107446-87107465 Msa1222770:CDS 20.0%
!!! TTTTTAGTAAATTGGTGATT+AGG - chr8_1:87107493-87107512 Msa1222770:CDS 20.0%
!!! AAAAATTTGTTTGTTCAGTT+CGG - chr8_1:87107668-87107687 Msa1222770:CDS 20.0%
!!! AGATGTGTTACAATTTTTTA+GGG + chr8_1:87107999-87108018 None:intergenic 20.0%
!! AATGATTATTACTGCTTTAT+TGG - chr8_1:87108869-87108888 Msa1222770:CDS 20.0%
!!! ATGATTATTACTGCTTTATT+GGG - chr8_1:87108870-87108889 Msa1222770:CDS 20.0%
!! GAAGAGACATTTAAATAAAA+AGG + chr8_1:87109035-87109054 None:intergenic 20.0%
!! ATAAGAAATGGATCTTAATT+AGG + chr8_1:87109290-87109309 None:intergenic 20.0%
!! TAAGATCCATTTCTTATATT+CGG - chr8_1:87109293-87109312 Msa1222770:intron 20.0%
!! AAATATCCGAATATAAGAAA+TGG + chr8_1:87109302-87109321 None:intergenic 20.0%
!!! ATTCTTGTTAGCAATATTTT+CGG + chr8_1:87109535-87109554 None:intergenic 20.0%
!! TGATGAATGATTCTTAAATA+TGG - chr8_1:87109756-87109775 Msa1222770:intron 20.0%
!!! TTTGAGATTTTTTGACAAAA+GGG + chr8_1:87109924-87109943 None:intergenic 20.0%
!!! GATTAATGAACTATTAGTTT+GGG + chr8_1:87110899-87110918 None:intergenic 20.0%
!! TGATTAATGAACTATTAGTT+TGG + chr8_1:87110900-87110919 None:intergenic 20.0%
! ATTGAATGAACGAAAAAGAA+AGG + chr8_1:87107338-87107357 None:intergenic 25.0%
! ACACCAATAAAACTTATTTG+TGG - chr8_1:87107559-87107578 Msa1222770:CDS 25.0%
! AAGTTACTCAATAGTTATAG+TGG + chr8_1:87107736-87107755 None:intergenic 25.0%
!!! GAGATGTGTTACAATTTTTT+AGG + chr8_1:87108000-87108019 None:intergenic 25.0%
!! TTTTCTGCATCATTAAAAAC+CGG - chr8_1:87108042-87108061 Msa1222770:CDS 25.0%
! GTTCTAGTATGATTTAAACA+TGG + chr8_1:87108186-87108205 None:intergenic 25.0%
! AACTACAACCTATTTATCAT+AGG - chr8_1:87108209-87108228 Msa1222770:intron 25.0%
! TTACATAGCCTATGATAAAT+AGG + chr8_1:87108220-87108239 None:intergenic 25.0%
! AGTGTATATTTATGCTTCAT+AGG - chr8_1:87108299-87108318 Msa1222770:intron 25.0%
!!! TTGAATAACTTTTCGATTTG+AGG - chr8_1:87108668-87108687 Msa1222770:CDS 25.0%
! AAAAAAATCACTAACATGTC+AGG + chr8_1:87108896-87108915 None:intergenic 25.0%
!! TTTTTCCTTCTTTTTCTGAA+TGG - chr8_1:87108915-87108934 Msa1222770:intron 25.0%
!! AATTTTCATATGAGAATTGC+TGG - chr8_1:87108985-87109004 Msa1222770:intron 25.0%
!! GGTCTTTTATATAATAATGC+TGG - chr8_1:87109006-87109025 Msa1222770:CDS 25.0%
!!! CAAAACAGATTTTAAGAGAA+AGG + chr8_1:87109263-87109282 None:intergenic 25.0%
! AGTTGAAGAAACTACATATT+AGG + chr8_1:87109793-87109812 None:intergenic 25.0%
!! ATCAAGTCAAGTATTTTCTT+AGG + chr8_1:87109834-87109853 None:intergenic 25.0%
!! ATATAATTTGTACCTGCAAA+TGG + chr8_1:87109893-87109912 None:intergenic 25.0%
!!! GTTTGAGATTTTTTGACAAA+AGG + chr8_1:87109925-87109944 None:intergenic 25.0%
! GATACAGAATTGATATCAAA+TGG - chr8_1:87110065-87110084 Msa1222770:intron 25.0%
! TATCAAATGGTTATCTAAAC+AGG - chr8_1:87110078-87110097 Msa1222770:intron 25.0%
! CTTAAATTAATGTTATCAGG+CGG + chr8_1:87110391-87110410 None:intergenic 25.0%
! GGACTTAAATTAATGTTATC+AGG + chr8_1:87110394-87110413 None:intergenic 25.0%
!! TTGGAAGTAGCTTTGATATA+AGG - chr8_1:87107423-87107442 Msa1222770:CDS 30.0%
ACGCCTCAAAGAAAAAAAAA+AGG + chr8_1:87107452-87107471 None:intergenic 30.0%
!! GCTCCACAAATAAGTTTTAT+TGG + chr8_1:87107565-87107584 None:intergenic 30.0%
ACTCAATAGTTATAGTGGTA+CGG + chr8_1:87107731-87107750 None:intergenic 30.0%
CTTTGGCAAAAGAATGAATT+AGG + chr8_1:87107765-87107784 None:intergenic 30.0%
ATCCTAATAGTGTTTCTCTA+AGG - chr8_1:87107817-87107836 Msa1222770:CDS 30.0%
TAGAAACCACAACAAAACTA+GGG + chr8_1:87107903-87107922 None:intergenic 30.0%
TTAGAAACCACAACAAAACT+AGG + chr8_1:87107904-87107923 None:intergenic 30.0%
TGTAGAGAGTAGAAAAACAA+GGG + chr8_1:87107928-87107947 None:intergenic 30.0%
ATGTAGAGAGTAGAAAAACA+AGG + chr8_1:87107929-87107948 None:intergenic 30.0%
TAAACCTTGTATCAGATGAA+AGG + chr8_1:87107958-87107977 None:intergenic 30.0%
ACTTCTGTCTCGTAAAAAAT+CGG + chr8_1:87108092-87108111 None:intergenic 30.0%
TCAAAACCACACCTAAAATT+GGG - chr8_1:87108113-87108132 Msa1222770:CDS 30.0%
ATAGGCTATGTAAATGTATC+CGG - chr8_1:87108227-87108246 Msa1222770:intron 30.0%
! TTTTGCCATTCAGAAAAAGA+AGG + chr8_1:87108923-87108942 None:intergenic 30.0%
! TAAATCACTAGCTTGATTCT+TGG - chr8_1:87109057-87109076 Msa1222770:CDS 30.0%
TGAATTGTTGAGAGAAAAGA+AGG - chr8_1:87109125-87109144 Msa1222770:CDS 30.0%
TGCTAACATCACTAATTACA+AGG + chr8_1:87109161-87109180 None:intergenic 30.0%
TGTGTGATTTATAGTGTTGT+CGG - chr8_1:87109326-87109345 Msa1222770:intron 30.0%
GGTAAATGATGATATAGAGA+AGG - chr8_1:87109347-87109366 Msa1222770:intron 30.0%
TAGAAAGAAGATTGAAAGCA+AGG - chr8_1:87109458-87109477 Msa1222770:intron 30.0%
! AATCAAGGTATCATTAGTGA+TGG - chr8_1:87109486-87109505 Msa1222770:intron 30.0%
! ATCAAGGTATCATTAGTGAT+GGG - chr8_1:87109487-87109506 Msa1222770:intron 30.0%
! AAAAAGAAAGGTACAAAGTG+AGG - chr8_1:87109569-87109588 Msa1222770:intron 30.0%
TTCTTCAACTATTATTGCAG+AGG - chr8_1:87109803-87109822 Msa1222770:intron 30.0%
! TTGACTTGATGAATGTTGAA+GGG - chr8_1:87109844-87109863 Msa1222770:intron 30.0%
TTTCAACCGTATTTGCAAAA+AGG + chr8_1:87109973-87109992 None:intergenic 30.0%
TGCAATCGAAAATGAAAATG+AGG + chr8_1:87110043-87110062 None:intergenic 30.0%
CTTTCACTTTCAGAAAACAT+TGG + chr8_1:87110304-87110323 None:intergenic 30.0%
GATAAATATTCTGCTGAAAC+TGG + chr8_1:87110369-87110388 None:intergenic 30.0%
ACTGCATTTGAATCATCAAT+TGG + chr8_1:87110415-87110434 None:intergenic 30.0%
AACATTTGCATTATTGACAG+TGG + chr8_1:87110470-87110489 None:intergenic 30.0%
TTGTTAAAATCCTCACTCAA+TGG + chr8_1:87110640-87110659 None:intergenic 30.0%
! TTTTGATGTTGTGAGTAACA+TGG + chr8_1:87110796-87110815 None:intergenic 30.0%
!! ATAATCCAAGGTATTGTTGA+AGG + chr8_1:87110830-87110849 None:intergenic 30.0%
GATTATCTTGCTTCTTCTAA+TGG - chr8_1:87110844-87110863 Msa1222770:intron 30.0%
!! TCAAGTTGAGAAGTTCTATT+CGG - chr8_1:87110930-87110949 Msa1222770:CDS 30.0%
CTTCTCACATGCAACTATAA+TGG - chr8_1:87107305-87107324 Msa1222770:CDS 35.0%
GCAACGGTGTAAACATATAT+TGG - chr8_1:87107404-87107423 Msa1222770:CDS 35.0%
!!! GGTGATTAGGTTAGTTTTCA+CGG - chr8_1:87107506-87107525 Msa1222770:CDS 35.0%
!!! GTTAGTTTTCACGGTTTGAA+CGG - chr8_1:87107515-87107534 Msa1222770:CDS 35.0%
ACTATTAGGATTGAGTCTCT+TGG + chr8_1:87107808-87107827 None:intergenic 35.0%
CACCTTAGAGAAACACTATT+AGG + chr8_1:87107822-87107841 None:intergenic 35.0%
TCTCTTTGCAACAAACACTA+GGG + chr8_1:87107868-87107887 None:intergenic 35.0%
TTCTCTTTGCAACAAACACT+AGG + chr8_1:87107869-87107888 None:intergenic 35.0%
!!! TACAAACCCTAGTTTTGTTG+TGG - chr8_1:87107894-87107913 Msa1222770:CDS 35.0%
CTCAAAACCACACCTAAAAT+TGG - chr8_1:87108112-87108131 Msa1222770:CDS 35.0%
CACTAATACATATCAGACTC+CGG + chr8_1:87108249-87108268 None:intergenic 35.0%
! TTTGAGGTAGCTTAGACATT+CGG + chr8_1:87108344-87108363 None:intergenic 35.0%
TACTACAACTACGAAGTCAT+TGG - chr8_1:87109095-87109114 Msa1222770:CDS 35.0%
TTAAGCTCTTCCATTCGAAT+CGG + chr8_1:87109417-87109436 None:intergenic 35.0%
GAAAGCAAGGATCAAAATCA+AGG - chr8_1:87109471-87109490 Msa1222770:intron 35.0%
! TCAAGGTATCATTAGTGATG+GGG - chr8_1:87109488-87109507 Msa1222770:intron 35.0%
! ATCATTAGTGATGGGGTATA+TGG - chr8_1:87109495-87109514 Msa1222770:intron 35.0%
! GTTAGCAATATTTTCGGATG+AGG + chr8_1:87109529-87109548 None:intergenic 35.0%
GCTAACAAGAATAAAACGCA+TGG - chr8_1:87109543-87109562 Msa1222770:intron 35.0%
AACGCATGGACAAAAAAGAA+AGG - chr8_1:87109557-87109576 Msa1222770:intron 35.0%
AAAAGAAGCCTCGTTTAGTT+TGG - chr8_1:87109634-87109653 Msa1222770:intron 35.0%
! AAAGAAGCCTCGTTTAGTTT+GGG - chr8_1:87109635-87109654 Msa1222770:intron 35.0%
GTTTCTGCAGTTAATCTTGT+CGG - chr8_1:87109681-87109700 Msa1222770:intron 35.0%
! CTTGACTTGATGAATGTTGA+AGG - chr8_1:87109843-87109862 Msa1222770:intron 35.0%
! TCACCTCCTTTTTGCAAATA+CGG - chr8_1:87109964-87109983 Msa1222770:intron 35.0%
TGGTTATCTAAACAGGATAG+AGG - chr8_1:87110085-87110104 Msa1222770:intron 35.0%
! CATCCAATGACATGTTTTGT+CGG - chr8_1:87110185-87110204 Msa1222770:intron 35.0%
! AACATTGGTGTCTCGAAATT+GGG + chr8_1:87110289-87110308 None:intergenic 35.0%
! AAACATTGGTGTCTCGAAAT+TGG + chr8_1:87110290-87110309 None:intergenic 35.0%
! GAAAGTTCGAGTTCTTTACA+TGG - chr8_1:87110319-87110338 Msa1222770:intron 35.0%
ATAAATCACTCTCCTGTTGA+AGG - chr8_1:87110544-87110563 Msa1222770:intron 35.0%
AGAATTGGAAGCAAAGTTAG+AGG + chr8_1:87110614-87110633 None:intergenic 35.0%
GTCGAAGAAAAATGAGAACT+GGG + chr8_1:87110700-87110719 None:intergenic 35.0%
TGTCGAAGAAAAATGAGAAC+TGG + chr8_1:87110701-87110720 None:intergenic 35.0%
AATGTCAAGATGGCTTACTT+GGG - chr8_1:87110755-87110774 Msa1222770:intron 35.0%
AGAAGAAGCAAGATAATCCA+AGG + chr8_1:87110842-87110861 None:intergenic 35.0%
GAATAGAACTTCTCAACTTG+AGG + chr8_1:87110931-87110950 None:intergenic 35.0%
CAAGGAATCATGGAATCAAA+TGG - chr8_1:87110955-87110974 Msa1222770:CDS 35.0%
GAGCAATTGCTTAATGTAGA+TGG - chr8_1:87110991-87111010 Msa1222770:CDS 35.0%
ATGGTTGTGGAGGATAGTTT+CGG - chr8_1:87107188-87107207 Msa1222770:CDS 40.0%
!!! TTCGGTGTTGACGATGTTTT+AGG - chr8_1:87107206-87107225 Msa1222770:CDS 40.0%
!!! GTTGACGATGTTTTAGGAGA+AGG - chr8_1:87107212-87107231 Msa1222770:CDS 40.0%
!!! TGTTTTAGGAGAAGGTTTCC+CGG - chr8_1:87107220-87107239 Msa1222770:CDS 40.0%
TCCAACTTATCTCAAAGTGC+TGG - chr8_1:87107274-87107293 Msa1222770:CDS 40.0%
!! TCCAGCACTTTGAGATAAGT+TGG + chr8_1:87107278-87107297 None:intergenic 40.0%
ACTATTCTCCTCTCATGCAA+CGG - chr8_1:87107388-87107407 Msa1222770:CDS 40.0%
ATCAAGCAACCAAAACAACG+TGG - chr8_1:87107591-87107610 Msa1222770:CDS 40.0%
TCAAGCAACCAAAACAACGT+GGG - chr8_1:87107592-87107611 Msa1222770:CDS 40.0%
TTGCAACAAACACTAGGGTT+GGG + chr8_1:87107863-87107882 None:intergenic 40.0%
TTTGCAACAAACACTAGGGT+TGG + chr8_1:87107864-87107883 None:intergenic 40.0%
CTCACCTTTCATCTGATACA+AGG - chr8_1:87107951-87107970 Msa1222770:CDS 40.0%
! TCTGAAACTGCCAAAATCGA+CGG + chr8_1:87108159-87108178 None:intergenic 40.0%
TTGAGGTAGCTTAGACATTC+GGG + chr8_1:87108343-87108362 None:intergenic 40.0%
CAACTGATATGTGTGTGAGT+AGG + chr8_1:87108398-87108417 None:intergenic 40.0%
! TTCTTTTGCCAAGACTGTTG+TGG - chr8_1:87108450-87108469 Msa1222770:intron 40.0%
! TCTTTTGCCAAGACTGTTGT+GGG - chr8_1:87108451-87108470 Msa1222770:intron 40.0%
! TGTTGTGGGTGTGTTTGTTT+TGG - chr8_1:87108465-87108484 Msa1222770:intron 40.0%
TGAGCTTACTGATGAAAGGT+AGG + chr8_1:87109236-87109255 None:intergenic 40.0%
TGTGTGAGCTTACTGATGAA+AGG + chr8_1:87109240-87109259 None:intergenic 40.0%
! GTGATGAAGAGTGTGATACA+TGG - chr8_1:87109369-87109388 Msa1222770:intron 40.0%
!! TCTAGTGAAACCGATTCGAA+TGG - chr8_1:87109404-87109423 Msa1222770:intron 40.0%
! TGGAAGAGCTTAAGAGCATA+TGG - chr8_1:87109424-87109443 Msa1222770:intron 40.0%
! AAGAAAGGTACAAAGTGAGG+AGG - chr8_1:87109572-87109591 Msa1222770:intron 40.0%
! ACTAAACGAGGCTTCTTTTG+AGG + chr8_1:87109633-87109652 None:intergenic 40.0%
TCATGATCCCAAACTAAACG+AGG + chr8_1:87109645-87109664 None:intergenic 40.0%
GTCACATAAACTCACTGTCA+AGG + chr8_1:87109707-87109726 None:intergenic 40.0%
TGAATGTTGAAGGGCTTACA+AGG - chr8_1:87109853-87109872 Msa1222770:intron 40.0%
GAATGTTGAAGGGCTTACAA+GGG - chr8_1:87109854-87109873 Msa1222770:intron 40.0%
AAATGTATCCAGCCATTTGC+AGG - chr8_1:87109878-87109897 Msa1222770:intron 40.0%
AATTTGTACCTGCAAATGGC+TGG + chr8_1:87109889-87109908 None:intergenic 40.0%
CAACCGTATTTGCAAAAAGG+AGG + chr8_1:87109970-87109989 None:intergenic 40.0%
ATGTCATTGGATGCATATGC+TGG + chr8_1:87110178-87110197 None:intergenic 40.0%
CATTCCTTCCAAGTTCAAAC+TGG + chr8_1:87110224-87110243 None:intergenic 40.0%
TGTTATGAGACTGAAGTGGA+GGG + chr8_1:87110264-87110283 None:intergenic 40.0%
ATGTTATGAGACTGAAGTGG+AGG + chr8_1:87110265-87110284 None:intergenic 40.0%
GGAATGTTATGAGACTGAAG+TGG + chr8_1:87110268-87110287 None:intergenic 40.0%
ACATGGCATTCAAACGTCAA+TGG - chr8_1:87110336-87110355 Msa1222770:intron 40.0%
AATGCAGTTACAGATTCCTC+TGG - chr8_1:87110427-87110446 Msa1222770:intron 40.0%
CTCACTCAATGGAACAGAAT+TGG + chr8_1:87110629-87110648 None:intergenic 40.0%
CAATTCTGTTCCATTGAGTG+AGG - chr8_1:87110627-87110646 Msa1222770:intron 40.0%
GAAACGATGCAATGTCAAGA+TGG - chr8_1:87110745-87110764 Msa1222770:intron 40.0%
CAATGTCAAGATGGCTTACT+TGG - chr8_1:87110754-87110773 Msa1222770:intron 40.0%
TTCCTCCTTCAACAATACCT+TGG - chr8_1:87110822-87110841 Msa1222770:intron 40.0%
!! ATCCAAGGTATTGTTGAAGG+AGG + chr8_1:87110827-87110846 None:intergenic 40.0%
TAATGGAGACACTAGTTCCA+TGG - chr8_1:87110861-87110880 Msa1222770:intron 40.0%
TTGGGCTAAACTTTGTACCA+TGG + chr8_1:87110881-87110900 None:intergenic 40.0%
GAGAAGTTCTATTCGGATCA+AGG - chr8_1:87110937-87110956 Msa1222770:CDS 40.0%
CTATTCGGATCAAGGAATCA+TGG - chr8_1:87110945-87110964 Msa1222770:CDS 40.0%
TGTTTACACCGTTGCATGAG+AGG + chr8_1:87107399-87107418 None:intergenic 45.0%
CGGTTTGAACGGTTGTGAAT+CGG - chr8_1:87107526-87107545 Msa1222770:CDS 45.0%
GGTCCAATACTGACCTACTT+TGG - chr8_1:87107689-87107708 Msa1222770:CDS 45.0%
CCTCCAAAGTAGGTCAGTAT+TGG + chr8_1:87107695-87107714 None:intergenic 45.0%
CCAATACTGACCTACTTTGG+AGG - chr8_1:87107692-87107711 Msa1222770:CDS 45.0%
TTGGTCACGGAAAGAGATTC+GGG + chr8_1:87107789-87107808 None:intergenic 45.0%
CTTGGTCACGGAAAGAGATT+CGG + chr8_1:87107790-87107809 None:intergenic 45.0%
AGGATTGAGTCTCTTGGTCA+CGG + chr8_1:87107802-87107821 None:intergenic 45.0%
GAAGTGAGAAAATCGGAGTC+CGG + chr8_1:87108064-87108083 None:intergenic 45.0%
! GGACTCCGATTTTCTCACTT+CGG - chr8_1:87108063-87108082 Msa1222770:CDS 45.0%
! GACTCCGATTTTCTCACTTC+GGG - chr8_1:87108064-87108083 Msa1222770:CDS 45.0%
! AGCAATCGAGGCCCAATTTT+AGG + chr8_1:87108127-87108146 None:intergenic 45.0%
! GTGTGAGTAGGTAGCTTTAC+TGG + chr8_1:87108386-87108405 None:intergenic 45.0%
AAACACACCCACAACAGTCT+TGG + chr8_1:87108461-87108480 None:intergenic 45.0%
TGATGTTAGCATGCCAGACA+TGG - chr8_1:87109170-87109189 Msa1222770:intron 45.0%
TTCAAGCTCCTTCAGCAAGT+CGG - chr8_1:87109198-87109217 Msa1222770:intron 45.0%
!! TTTCAAGTCCGACTTGCTGA+AGG + chr8_1:87109209-87109228 None:intergenic 45.0%
TCAGCAAGTCGGACTTGAAA+TGG - chr8_1:87109209-87109228 Msa1222770:intron 45.0%
TTGGATCCCTACCAGCAAAA+GGG - chr8_1:87110118-87110137 Msa1222770:intron 45.0%
! ACTGAACCCTTTTGCTGGTA+GGG + chr8_1:87110127-87110146 None:intergenic 45.0%
! TACTGAACCCTTTTGCTGGT+AGG + chr8_1:87110128-87110147 None:intergenic 45.0%
TACCAGCAAAAGGGTTCAGT+AGG - chr8_1:87110127-87110146 Msa1222770:intron 45.0%
AAGGGTTCAGTAGGTGGATA+TGG - chr8_1:87110136-87110155 Msa1222770:intron 45.0%
AGGGTTCAGTAGGTGGATAT+GGG - chr8_1:87110137-87110156 Msa1222770:intron 45.0%
CAGCCGACAAAACATGTCAT+TGG + chr8_1:87110191-87110210 None:intergenic 45.0%
CACACCATCCAGTTTGAACT+TGG - chr8_1:87110213-87110232 Msa1222770:intron 45.0%
CCTTCCAAGTTCAAACTGGA+TGG + chr8_1:87110220-87110239 None:intergenic 45.0%
CCATCCAGTTTGAACTTGGA+AGG - chr8_1:87110217-87110236 Msa1222770:intron 45.0%
TTCACAGCAGAACCTTCAAC+AGG + chr8_1:87110559-87110578 None:intergenic 45.0%
CCACTTCTGACAGGGTTAAA+AGG + chr8_1:87110589-87110608 None:intergenic 45.0%
! CCTTTTAACCCTGTCAGAAG+TGG - chr8_1:87110586-87110605 Msa1222770:intron 45.0%
TAGAGGAACCACTTCTGACA+GGG + chr8_1:87110597-87110616 None:intergenic 45.0%
TTAGAGGAACCACTTCTGAC+AGG + chr8_1:87110598-87110617 None:intergenic 45.0%
CATTGCATCGTTTCCTCCAA+CGG + chr8_1:87110739-87110758 None:intergenic 45.0%
TTCAGAATAGTCGTGTGCCT+TGG - chr8_1:87111019-87111038 Msa1222770:CDS 45.0%
!!! TTTTTTTTTTTTTTTTTTTG+AGG + chr8_1:87108360-87108379 None:intergenic 5.0%
!!! AAAATATTTTGTTAAAAAAA+TGG + chr8_1:87108706-87108725 None:intergenic 5.0%
!!! AAATTATATAAGTATTTTTT+TGG - chr8_1:87108753-87108772 Msa1222770:CDS 5.0%
TTTAGGAGAAGGTTTCCCGG+CGG - chr8_1:87107223-87107242 Msa1222770:CDS 50.0%
AGCAACCAAAACAACGTGGG+TGG - chr8_1:87107595-87107614 Msa1222770:CDS 50.0%
CGGAAAGAGATTCGGGACTT+TGG + chr8_1:87107782-87107801 None:intergenic 50.0%
!! TCGAGGCCCAATTTTAGGTG+TGG + chr8_1:87108122-87108141 None:intergenic 50.0%
!!! TCCAAATCGGCCGTCGATTT+TGG - chr8_1:87108146-87108165 Msa1222770:CDS 50.0%
GTTAGCATGCCAGACATGGA+TGG - chr8_1:87109174-87109193 Msa1222770:intron 50.0%
AGCTTGAAGCCATCCATGTC+TGG + chr8_1:87109186-87109205 None:intergenic 50.0%
GGATAGAGGAGATGATGCGT+TGG - chr8_1:87110099-87110118 Msa1222770:intron 50.0%
GTTGGATCCCTACCAGCAAA+AGG - chr8_1:87110117-87110136 Msa1222770:intron 50.0%
! CACCTACTGAACCCTTTTGC+TGG + chr8_1:87110132-87110151 None:intergenic 50.0%
CAGCAAAAGGGTTCAGTAGG+TGG - chr8_1:87110130-87110149 Msa1222770:intron 50.0%
GGGTTCAGTAGGTGGATATG+GGG - chr8_1:87110138-87110157 Msa1222770:intron 50.0%
TCTGATGTCTTGGAAGCCAG+AGG + chr8_1:87110446-87110465 None:intergenic 50.0%
!! TGACAGTGGCTCTGATGTCT+TGG + chr8_1:87110456-87110475 None:intergenic 50.0%
! AGACATCGTTGCTGTTCCGT+TGG - chr8_1:87110720-87110739 Msa1222770:intron 50.0%
TTAGGAGAAGGTTTCCCGGC+GGG - chr8_1:87107224-87107243 Msa1222770:CDS 55.0%
! AGCTGCCACCCACGTTGTTT+TGG + chr8_1:87107603-87107622 None:intergenic 55.0%
GCTGCTCTCTCCTCCAAAGT+AGG + chr8_1:87107705-87107724 None:intergenic 55.0%
GGCGCCCGAAGTGAGAAAAT+CGG + chr8_1:87108071-87108090 None:intergenic 55.0%
GGGCCTCGATTGCTCCAAAT+CGG - chr8_1:87108133-87108152 Msa1222770:CDS 55.0%
GCCAAAATCGACGGCCGATT+TGG + chr8_1:87108150-87108169 None:intergenic 55.0%
! CATCGTTGCTGTTCCGTTGG+AGG - chr8_1:87110723-87110742 Msa1222770:intron 55.0%
!! CGGCCGATTTGGAGCAATCG+AGG + chr8_1:87108139-87108158 None:intergenic 60.0%
CCAGAACACGCATACCCGCC+GGG + chr8_1:87107241-87107260 None:intergenic 65.0%
GCCAGAACACGCATACCCGC+CGG + chr8_1:87107242-87107261 None:intergenic 65.0%
CCCGGCGGGTATGCGTGTTC+TGG - chr8_1:87107238-87107257 Msa1222770:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 87107188 87111053 87107188 ID=Msa1222770;Name=Msa1222770
chr8_1 mRNA 87107188 87111053 87107188 ID=Msa1222770-mRNA-1;Parent=Msa1222770;Name=Msa1222770-mRNA-1;_AED=0.06;_eAED=0.08;_QI=0|0|0|1|1|1|5|0|583
chr8_1 exon 87110915 87111053 87110915 ID=Msa1222770-mRNA-1:exon:31418;Parent=Msa1222770-mRNA-1
chr8_1 exon 87108995 87109147 87108995 ID=Msa1222770-mRNA-1:exon:31417;Parent=Msa1222770-mRNA-1
chr8_1 exon 87108530 87108901 87108530 ID=Msa1222770-mRNA-1:exon:31416;Parent=Msa1222770-mRNA-1
chr8_1 exon 87108342 87108439 87108342 ID=Msa1222770-mRNA-1:exon:31415;Parent=Msa1222770-mRNA-1
chr8_1 exon 87107188 87108177 87107188 ID=Msa1222770-mRNA-1:exon:31414;Parent=Msa1222770-mRNA-1
chr8_1 CDS 87110915 87111053 87110915 ID=Msa1222770-mRNA-1:cds;Parent=Msa1222770-mRNA-1
chr8_1 CDS 87108995 87109147 87108995 ID=Msa1222770-mRNA-1:cds;Parent=Msa1222770-mRNA-1
chr8_1 CDS 87108530 87108901 87108530 ID=Msa1222770-mRNA-1:cds;Parent=Msa1222770-mRNA-1
chr8_1 CDS 87108342 87108439 87108342 ID=Msa1222770-mRNA-1:cds;Parent=Msa1222770-mRNA-1
chr8_1 CDS 87107188 87108177 87107188 ID=Msa1222770-mRNA-1:cds;Parent=Msa1222770-mRNA-1
Gene Sequence

>Msa1222770

ATGGTTGTGGAGGATAGTTTCGGTGTTGACGATGTTTTAGGAGAAGGTTTCCCGGCGGGTATGCGTGTTCTGGCAGTTGATGACGATCCAACTTATCTCAAAGTGCTGGAGAAGCAACTTCTCACATGCAACTATAATGTTACTACAACTACGAAGTCATTGGAAGCGCTTGAATTGTTGAGAGAAAAGAAGGATATGTTTGACCTTGTAATTAGTGATGTTAGCATGCCAGACATGGATGGCTTCAAGCTCCTTCAGCAAGTCGGACTTGAAATGGACCTACCTTTCATCATGTTGTCGGTAAATGATGATATAGAGAAGGTGATGAAGAGTGTGATACATGGTGCTTGCAACTATCTAGTGAAACCGATTCGAATGGAAGAGCTTAAGAGCATATGGCAACATGTAGTTAGAAAGAAGATTGAAAGCAAGGATCAAAATCAAGGTATCATTAGTGATGGGGTATATGGTCAAGACACCTCATCCGAAAATATTGCTAACAAGAATAAAACGCATGGACAAAAAAGAAAGGTACAAAGTGAGGAGGAAGAAGCAGAACAAGATAATGATGAGAAACGTTCGCCTCAAAAGAAGCCTCGTTTAGTTTGGGATCATGAGTTGCATCGAAAATTTGTTTCTGCAGTTAATCTTGTCGGCCTTGACATTTCTTCAACTATTATTGCAGAGGCTTCGCCTAAGAAAATACTTGACTTGATGAATGTTGAAGGGCTTACAAGGGAAAATGTATCCAGCCATTTGCAGAGATACAGAATTGATATCAAATGGTTATCTAAACAGGATAGAGGAGATGATGCGTTGGATCCCTACCAGCAAAAGGGTTCAGTAGGTGGATATGGGGATTTTTGCACACTGCCAGCATATGCATCCAATGACATGTTTTGTCGGCTGAACACACCATCCAGTTTGAACTTGGAAGGAATGAGTTCTTCTGCACTAGTCCCTCCACTTCAGTCTCATAACATTCCCAATTTCGAGACACCAATGTTTTCTGAAAGTGAAAGTTCGAGTTCTTTACATGGCATTCAAACGTCAATGGAAATTAACCAGTTTCAGCAGAATATTTATCCGCCTGATAACATTAATTTAAGTCCAATTGATGATTCAAATGCAGTTACAGATTCCTCTGGCTTCCAAGACATCAGAGCCACTGTCAATAATGCAAATGTTTCTCTTTCTTGCATCTCAAGCAATCACATACAAACACATAAATCAGAAGCATTTATAAATCACTCTCCTGTTGAAGGTTCTGCTGTGAAAACACAACCTTTTAACCCTGTCAGAAGTGGTTCCTCTAACTTTGCTTCCAATTCTGTTCCATTGAGTGAGGATTTTAACAATGATCAAATGTTGCACAATAACTACAAGTTTACTTCTCCCAGTTCTCATTTTTCTTCGACAGACATCGTTGCTGTTCCGTTGGAGGAAACGATGCAATGTCAAGATGGCTTACTTGGGAATGTTATAAATGCTCCATGTTACTCACAACATCAAAATGCGAGTTCCTCCTTCAACAATACCTTGGATTATCTTGCTTCTTCTAATGGAGACACTAGTTCCATGGTACAAAGTTTAGCCCAAACTAATAGTTCATTAATCACTCAGATGCCTCAAGTTGAGAAGTTCTATTCGGATCAAGGAATCATGGAATCAAATGGTGATTGCTTTGTTGAGCAATTGCTTAATGTAGATGGATTCATTCAGAATAGTCGTGTGCCTTGGACAACACAATAA
Protein sequence

>Msa1222770

MVVEDSFGVDDVLGEGFPAGMRVLAVDDDPTYLKVLEKQLLTCNYNVTTTTKSLEALELLREKKDMFDLVISDVSMPDMDGFKLLQQVGLEMDLPFIMLSVNDDIEKVMKSVIHGACNYLVKPIRMEELKSIWQHVVRKKIESKDQNQGIISDGVYGQDTSSENIANKNKTHGQKRKVQSEEEEAEQDNDEKRSPQKKPRLVWDHELHRKFVSAVNLVGLDISSTIIAEASPKKILDLMNVEGLTRENVSSHLQRYRIDIKWLSKQDRGDDALDPYQQKGSVGGYGDFCTLPAYASNDMFCRLNTPSSLNLEGMSSSALVPPLQSHNIPNFETPMFSESESSSSLHGIQTSMEINQFQQNIYPPDNINLSPIDDSNAVTDSSGFQDIRATVNNANVSLSCISSNHIQTHKSEAFINHSPVEGSAVKTQPFNPVRSGSSNFASNSVPLSEDFNNDQMLHNNYKFTSPSSHFSSTDIVAVPLEETMQCQDGLLGNVINAPCYSQHQNASSSFNNTLDYLASSNGDTSSMVQSLAQTNSSLITQMPQVEKFYSDQGIMESNGDCFVEQLLNVDGFIQNSRVPWTTQ*