AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1223630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1223630 MtrunA17_Chr4g0075321 65.682 1049 193 13 3 884 9 1057 0.0 1252
Msa1223630 MtrunA17_Chr4g0075341 73.179 302 35 2 217 518 112 367 2.52e-143 429
Msa1223630 MtrunA17_Chr4g0075341 77.064 109 25 0 259 367 4 112 3.53e-49 178
Msa1223630 MtrunA17_Chr5g0403241 65.758 330 102 4 564 884 1173 1500 4.53e-129 422
Msa1223630 MtrunA17_Chr5g0403241 53.939 165 58 4 28 177 103 264 1.10e-44 175
Msa1223630 MtrunA17_Chr5g0403241 33.129 326 163 6 172 448 333 652 2.21e-44 174
Msa1223630 MtrunA17_Chr5g0403241 52.747 91 43 0 449 539 853 943 1.69e-22 104
Msa1223630 MtrunA17_Chr8g0373821 65.574 305 90 6 586 883 234 530 1.07e-119 374
Msa1223630 MtrunA17_Chr8g0373821 48.837 215 104 3 238 452 13 221 1.64e-48 181
Msa1223630 MtrunA17_Chr8g0373841 49.315 292 86 6 310 540 64 354 3.00e-72 246
Msa1223630 MtrunA17_Chr8g0373891 53.535 198 72 4 1 179 1 197 1.00e-61 210
Msa1223630 MtrunA17_Chr5g0399801 33.451 284 119 15 604 863 811 1048 2.90e-28 122
Msa1223630 MtrunA17_Chr4g0003511 37.430 179 89 6 702 863 839 1011 5.86e-27 118
Msa1223630 MtrunA17_Chr4g0003501 38.202 178 87 7 702 863 744 914 6.77e-27 118
Msa1223630 MtrunA17_Chr3g0080761 30.000 280 136 10 591 847 363 605 8.37e-22 101
Msa1223630 MtrunA17_Chr7g0232811 33.871 186 88 6 719 871 323 506 2.08e-21 99.4
Msa1223630 MtrunA17_Chr7g0255181 29.167 312 159 13 594 883 426 697 2.16e-21 100
Msa1223630 MtrunA17_Chr7g0232981 35.976 164 80 6 721 863 316 475 3.13e-21 98.6
Msa1223630 MtrunA17_Chr1g0190311 43.165 139 73 5 719 854 459 594 3.59e-21 99.0
Msa1223630 MtrunA17_Chr8g0354821 27.817 284 157 9 591 859 390 640 2.95e-20 96.3
Msa1223630 MtrunA17_Chr1g0183321 37.423 163 92 7 719 876 562 719 8.63e-20 95.1
Msa1223630 MtrunA17_Chr1g0170651 30.903 288 139 14 571 850 261 496 5.91e-19 91.7
Msa1223630 MtrunA17_Chr7g0232841 35.955 178 80 8 719 863 311 487 8.94e-19 90.9
Msa1223630 MtrunA17_Chr7g0262001 38.636 132 78 3 719 848 518 648 1.38e-17 87.8
Msa1223630 MtrunA17_Chr6g0476121 34.409 186 94 7 697 858 417 598 2.87e-17 86.7
Msa1223630 MtrunA17_Chr7g0252211 27.875 287 142 10 600 858 463 712 7.55e-17 85.5
Msa1223630 MtrunA17_Chr6g0476111 34.254 181 91 7 702 858 473 649 1.75e-16 84.3
Msa1223630 MtrunA17_Chr8g0369301 30.380 158 96 4 702 847 553 708 2.37e-16 84.0
Msa1223630 MtrunA17_Chr2g0305371 34.545 165 91 5 722 883 314 464 3.30e-16 82.8
Msa1223630 MtrunA17_Chr8g0368901 33.333 159 90 5 702 847 573 728 4.02e-16 83.2
Msa1223630 MtrunA17_Chr8g0368911 30.864 162 90 5 702 847 566 721 1.39e-15 81.3
Msa1223630 MtrunA17_Chr6g0467381 31.013 158 92 4 704 847 381 535 2.16e-15 80.5
Msa1223630 MtrunA17_Chr6g0467421 31.013 158 92 4 704 847 381 535 2.32e-15 80.1
Msa1223630 MtrunA17_Chr1g0163051 29.412 187 113 5 703 874 463 645 3.59e-15 79.7
Msa1223630 MtrunA17_Chr1g0163041 33.553 152 83 4 703 840 382 529 4.52e-15 79.3
Msa1223630 MtrunA17_Chr6g0467531 31.013 158 92 4 704 847 381 535 6.69e-15 79.0
Msa1223630 MtrunA17_Chr6g0467411 31.847 157 88 5 704 845 299 451 1.20e-14 77.8
Msa1223630 MtrunA17_Chr1g0201621 32.099 162 90 4 726 881 67 214 2.96e-14 76.3
Msa1223630 MtrunA17_Chr3g0094881 28.723 188 116 5 703 875 439 623 3.42e-14 76.6
Msa1223630 MtrunA17_Chr3g0125251 30.303 165 94 4 726 883 1307 1457 3.54e-14 77.4
Msa1223630 MtrunA17_Chr1g0201311 32.099 162 90 4 726 881 67 214 3.56e-14 76.3
Msa1223630 MtrunA17_Chr6g0467401 30.380 158 93 4 704 847 381 535 3.66e-14 76.3
Msa1223630 MtrunA17_Chr6g0477001 31.765 170 99 4 716 881 85 241 1.40e-13 73.2
Msa1223630 MtrunA17_Chr2g0306961 30.189 159 94 4 704 848 280 435 2.40e-13 73.6
Msa1223630 MtrunA17_Chr6g0460921 37.288 118 70 3 721 835 242 358 2.57e-12 70.1
Msa1223630 MtrunA17_Chr7g0232871 45.902 61 30 1 725 782 2 62 4.24e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1223630 AT2G23740.1 54.667 300 121 5 572 864 1054 1345 1.91e-91 316
Msa1223630 AT2G23740.1 33.191 470 202 11 43 403 51 517 1.50e-68 249
Msa1223630 AT2G23740.1 43.478 92 52 0 450 541 725 816 3.63e-16 84.3
Msa1223630 AT2G23740.3 54.667 300 121 5 572 864 1061 1352 2.12e-91 316
Msa1223630 AT2G23740.3 33.333 477 199 12 43 403 51 524 4.95e-68 248
Msa1223630 AT2G23740.3 43.478 92 52 0 450 541 732 823 3.39e-16 84.3
Msa1223630 AT2G23740.6 54.667 300 121 5 572 864 1061 1352 2.12e-91 316
Msa1223630 AT2G23740.6 33.333 477 199 12 43 403 51 524 4.95e-68 248
Msa1223630 AT2G23740.6 43.478 92 52 0 450 541 732 823 3.39e-16 84.3
Msa1223630 AT2G23740.2 54.667 300 121 5 572 864 1061 1352 2.12e-91 316
Msa1223630 AT2G23740.2 33.333 477 199 12 43 403 51 524 4.95e-68 248
Msa1223630 AT2G23740.2 43.478 92 52 0 450 541 732 823 3.39e-16 84.3
Msa1223630 AT2G23740.4 54.198 262 112 3 572 833 1061 1314 2.05e-80 284
Msa1223630 AT2G23740.4 33.333 477 199 12 43 403 51 524 4.09e-68 248
Msa1223630 AT2G23740.4 43.478 92 52 0 450 541 732 823 3.22e-16 84.3
Msa1223630 AT2G23740.5 54.198 262 112 3 572 833 1061 1314 2.05e-80 284
Msa1223630 AT2G23740.5 33.333 477 199 12 43 403 51 524 4.09e-68 248
Msa1223630 AT2G23740.5 43.478 92 52 0 450 541 732 823 3.22e-16 84.3
Msa1223630 AT2G35160.5 40.411 146 70 4 702 847 572 700 2.14e-24 110
Msa1223630 AT2G35160.2 40.411 146 70 4 702 847 608 736 2.20e-24 110
Msa1223630 AT2G35160.3 40.411 146 70 4 702 847 608 736 2.20e-24 110
Msa1223630 AT2G35160.1 40.411 146 70 4 702 847 608 736 2.20e-24 110
Msa1223630 AT2G35160.4 40.411 146 70 4 702 847 608 736 2.20e-24 110
Msa1223630 AT2G22740.2 35.714 168 85 5 702 852 576 737 2.31e-23 107
Msa1223630 AT2G22740.1 35.714 168 85 5 702 852 576 737 2.31e-23 107
Msa1223630 AT1G73100.1 27.758 281 155 10 593 859 375 621 1.07e-21 101
Msa1223630 AT5G04940.2 37.333 150 78 4 703 839 457 603 1.04e-20 98.2
Msa1223630 AT5G04940.1 37.333 150 78 4 703 839 457 603 1.04e-20 98.2
Msa1223630 AT3G04380.2 38.406 138 80 4 719 854 251 385 2.96e-20 95.5
Msa1223630 AT3G04380.6 38.406 138 80 4 719 854 251 385 3.03e-20 95.5
Msa1223630 AT3G04380.5 38.406 138 80 4 719 854 235 369 3.21e-20 95.1
Msa1223630 AT3G04380.1 38.406 138 80 4 719 854 278 412 3.94e-20 95.5
Msa1223630 AT3G04380.4 38.406 138 80 4 719 854 278 412 3.97e-20 95.1
Msa1223630 AT3G04380.3 38.406 138 80 4 719 854 262 396 4.63e-20 95.1
Msa1223630 AT1G17770.1 32.632 190 116 4 703 883 481 667 9.87e-20 95.1
Msa1223630 AT5G13960.1 29.310 290 133 10 600 858 331 579 2.09e-19 94.0
Msa1223630 AT5G13960.2 29.310 290 133 10 600 858 197 445 2.13e-19 93.2
Msa1223630 AT1G04050.3 40.299 134 74 5 719 850 438 567 4.95e-19 92.8
Msa1223630 AT1G04050.2 40.299 134 74 5 719 850 542 671 6.28e-19 92.4
Msa1223630 AT1G04050.1 40.299 134 74 5 719 850 542 671 6.28e-19 92.4
Msa1223630 AT3G03750.2 40.171 117 67 2 721 835 169 284 1.22e-17 85.9
Msa1223630 AT4G13460.1 27.132 258 136 8 604 845 386 607 3.43e-16 83.6
Msa1223630 AT4G13460.2 27.132 258 136 8 604 845 386 607 3.43e-16 83.6
Msa1223630 AT1G77300.1 32.530 166 91 4 726 884 1009 1160 9.25e-16 82.8
Msa1223630 AT1G77300.2 34.320 169 84 6 726 884 1009 1160 1.34e-15 82.4
Msa1223630 AT5G43990.8 38.806 134 75 5 719 850 457 585 2.00e-15 81.3
Msa1223630 AT5G43990.12 38.806 134 75 5 719 850 457 585 2.00e-15 81.3
Msa1223630 AT5G43990.6 38.806 134 75 5 719 850 457 585 2.00e-15 81.3
Msa1223630 AT5G43990.13 38.806 134 75 5 719 850 457 585 2.00e-15 81.3
Msa1223630 AT5G43990.7 38.806 134 75 5 719 850 437 565 2.15e-15 80.9
Msa1223630 AT5G43990.3 38.806 134 75 5 719 850 526 654 2.37e-15 80.9
Msa1223630 AT5G43990.11 38.806 134 75 5 719 850 526 654 2.37e-15 80.9
Msa1223630 AT5G43990.1 38.806 134 75 5 719 850 526 654 2.37e-15 80.9
Msa1223630 AT5G43990.4 38.806 134 75 5 719 850 526 654 2.37e-15 80.9
Msa1223630 AT5G43990.9 38.806 134 75 5 719 850 549 677 2.44e-15 80.9
Msa1223630 AT5G43990.2 38.806 134 75 5 719 850 549 677 2.44e-15 80.9
Msa1223630 AT5G43990.16 38.806 134 75 5 719 850 506 634 2.45e-15 80.9
Msa1223630 AT5G43990.5 38.806 134 75 5 719 850 506 634 2.45e-15 80.9
Msa1223630 AT5G43990.17 38.806 134 75 5 719 850 506 634 2.45e-15 80.9
Msa1223630 AT5G43990.14 38.806 134 75 5 719 850 506 634 2.45e-15 80.9
Msa1223630 AT5G43990.15 38.806 134 75 5 719 850 529 657 2.66e-15 80.9
Msa1223630 AT5G43990.10 38.806 134 75 5 719 850 529 657 2.66e-15 80.9
Msa1223630 AT2G33290.1 32.692 156 91 4 702 845 455 608 6.40e-15 79.7
Msa1223630 AT2G33290.3 32.692 156 91 4 702 845 455 608 6.40e-15 79.7
Msa1223630 AT2G33290.4 32.692 156 91 4 702 845 455 608 6.40e-15 79.7
Msa1223630 AT2G33290.2 32.692 156 91 4 702 845 455 608 6.40e-15 79.7
Msa1223630 AT4G30860.1 33.333 165 93 5 722 883 307 457 3.15e-14 76.6
Msa1223630 AT2G24740.1 30.282 142 88 3 728 860 566 705 2.73e-13 74.3
Msa1223630 AT1G76710.4 33.628 113 64 1 726 838 72 173 1.04e-11 68.9
Msa1223630 AT1G76710.3 33.628 113 64 1 726 838 72 173 1.15e-11 68.9
Msa1223630 AT1G76710.2 33.628 113 64 1 726 838 72 173 1.24e-11 68.6
Msa1223630 AT1G76710.1 33.628 113 64 1 726 838 72 173 1.24e-11 68.6

Find 153 sgRNAs with CRISPR-Local

Find 462 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAATAATTCCTTGTTTC+TGG 0.086986 8_1:-88133804 None:intergenic
GGTCTTCTATATATGAATTT+TGG 0.129949 8_1:-88133308 None:intergenic
CTCATTATCATTAGTTGGTT+TGG 0.232403 8_1:-88133754 None:intergenic
AATCACTATGAGCTTGTTCT+TGG 0.247078 8_1:+88139859 Msa1223630:CDS
TTGGAACTATGGAGAAATTA+TGG 0.248631 8_1:+88137704 Msa1223630:CDS
ATTCATTGTGGTGAACATTT+TGG 0.265618 8_1:+88137685 Msa1223630:CDS
ACTTGGTAATTCACAAGATT+TGG 0.291484 8_1:-88139613 None:intergenic
GCACCAGCACAAACAAAATT+AGG 0.298992 8_1:+88136779 Msa1223630:CDS
AATTCAAATCATACAAGATT+AGG 0.305441 8_1:+88137973 Msa1223630:CDS
TCATCATGAAGGATTGAAAA+TGG 0.305942 8_1:+88133887 Msa1223630:CDS
CCATTCTGCAATATTCTGTT+AGG 0.306157 8_1:-88138792 None:intergenic
TATGATAATCATTATCAAAA+AGG 0.306438 8_1:-88138404 None:intergenic
TGCTCCATTACAACGCTTGC+AGG 0.319038 8_1:-88137928 None:intergenic
TTCTGCTCATTATCATTAGT+TGG 0.332370 8_1:-88133759 None:intergenic
ATCATTGATTCTACTAGATA+TGG 0.343434 8_1:+88139209 Msa1223630:CDS
ATTCGACCATTGTTGTCATA+TGG 0.348924 8_1:-88138468 None:intergenic
CTTTGCAGTGGAAAGAGAAT+TGG 0.349647 8_1:+88133679 Msa1223630:intron
ATCAAGGCCTTTGGATGAAA+TGG 0.360349 8_1:+88137075 Msa1223630:CDS
CAACAATGGTCGAATCATAT+TGG 0.361050 8_1:+88138476 Msa1223630:CDS
TGTCTCGATTCATCAATAAT+AGG 0.361744 8_1:+88139237 Msa1223630:CDS
TCTTGTTAACAGATTGCTTT+GGG 0.366412 8_1:+88139817 Msa1223630:intron
GCGCGATGAACTTCAAGTTT+AGG 0.367160 8_1:-88136917 None:intergenic
AGTGTTTAAAACAGAGAAAA+AGG 0.368260 8_1:+88138833 Msa1223630:CDS
ATCTAAATCTTCCTAGGCCT+TGG 0.369669 8_1:+88138115 Msa1223630:CDS
ATACCGAATCATTGCAAATT+CGG 0.372609 8_1:-88137441 None:intergenic
TGCCAACTTGAAGGCTTACT+TGG 0.375022 8_1:-88136886 None:intergenic
TTTCTTGCAAAAGGATAAGT+TGG 0.377609 8_1:-88137323 None:intergenic
AAACATCACGAAACAACAAT+AGG 0.379215 8_1:+88133400 Msa1223630:CDS
TGATGAGTTTCATATGCTAT+AGG 0.381656 8_1:-88133870 None:intergenic
CTTCACTAACAAGAAACTAT+TGG 0.382139 8_1:+88137600 Msa1223630:CDS
ATTCAAATCATACAAGATTA+GGG 0.392451 8_1:+88137974 Msa1223630:CDS
CTCTTGTTTATATGAGCATT+GGG 0.396331 8_1:-88137352 None:intergenic
AGTTGCAGGGATGGGGTGTA+AGG 0.397984 8_1:+88138926 Msa1223630:intron
TTCTTGTTAACAGATTGCTT+TGG 0.400721 8_1:+88139816 Msa1223630:intron
CAGAAACAAGGAATTATTCA+TGG 0.401697 8_1:+88133805 Msa1223630:CDS
GGGCATATGTTTCTTGCAAA+AGG 0.410010 8_1:-88137332 None:intergenic
TGAACTACGGTTTCACTCAC+TGG 0.410331 8_1:-88137013 None:intergenic
TATGAGCTTGTTCTTGGAAA+AGG 0.413396 8_1:+88139865 Msa1223630:CDS
CATAATGCAAAAGACATATT+CGG 0.414362 8_1:+88138423 Msa1223630:CDS
ATTGAGAAGGCAAATGAGAT+TGG 0.416775 8_1:+88137820 Msa1223630:CDS
ATCACAAGTTTCACAACAAC+AGG 0.420819 8_1:-88138373 None:intergenic
GGATTGTAAGCGTCACATAT+TGG 0.422946 8_1:+88139651 Msa1223630:CDS
GCCTCTGGCTGTGTGGTTCA+AGG 0.429442 8_1:+88133467 Msa1223630:CDS
TGTGGAGGAACAACCATTGC+TGG 0.433020 8_1:+88137274 Msa1223630:CDS
AGGAACAACATCAAGGCCTT+TGG 0.434508 8_1:+88137066 Msa1223630:CDS
GTTTACATGAGGCTGCTTCA+TGG 0.436618 8_1:-88137851 None:intergenic
TCATTGCAAATTCGGATCTT+CGG 0.440241 8_1:-88137433 None:intergenic
ATGGGGTGTAAGGGCTGGCG+AGG 0.443435 8_1:+88138936 Msa1223630:CDS
CCTTGGAGTTGACATATGCT+TGG 0.443560 8_1:-88137153 None:intergenic
TCTTAAACATTGCCTTCCCT+TGG 0.444432 8_1:-88137170 None:intergenic
CAAGTCATGGATATGCTTCC+TGG 0.445994 8_1:+88133282 None:intergenic
GAATGGAATTCGCGTTAAGC+TGG 0.452505 8_1:+88138809 Msa1223630:CDS
CCATGCTCTCCACAAGAACT+TGG 0.454933 8_1:-88139630 None:intergenic
GTTGGAGGTGGATGAGCCTC+TGG 0.456223 8_1:+88133452 Msa1223630:CDS
TGTATGATTTGAATTTATGA+TGG 0.456913 8_1:-88137965 None:intergenic
AAGATTAGGGTCAGTGCAAA+AGG 0.457951 8_1:+88137987 Msa1223630:CDS
ATGGTTGTTCCTCCACAGAT+TGG 0.458832 8_1:-88137268 None:intergenic
CTGCAATATTCTGTTAGGAC+AGG 0.464010 8_1:-88138787 None:intergenic
GCCTTCAAGTTGGCAGCAAA+AGG 0.465791 8_1:+88136894 Msa1223630:CDS
CAGGGATGGGGTGTAAGGGC+TGG 0.469537 8_1:+88138931 Msa1223630:intron
TCTGAAAGCTTAAGTTCGGC+AGG 0.470694 8_1:-88137748 None:intergenic
GCTCTTGTTTATATGAGCAT+TGG 0.477416 8_1:-88137353 None:intergenic
TTCGACCATTGTTGTCATAT+GGG 0.478371 8_1:-88138467 None:intergenic
GTAAAGTTCAACCAAGGCCT+AGG 0.481351 8_1:-88138126 None:intergenic
TAGTAGAATCAATGATATAC+CGG 0.482519 8_1:-88139202 None:intergenic
CCAAGTTCTTGTGGAGAGCA+TGG 0.483960 8_1:+88139630 Msa1223630:CDS
TTCTGCGCAAAGAATATCTT+AGG 0.489474 8_1:+88137529 Msa1223630:CDS
AGATCCTGCAAGCGTTGTAA+TGG 0.490133 8_1:+88137924 Msa1223630:CDS
CAACGTGCTTCTAGCTCTGA+TGG 0.491728 8_1:+88136857 Msa1223630:CDS
AGATTCTGAAAGCTTAAGTT+CGG 0.492279 8_1:-88137752 None:intergenic
GTTTCATATGCTATAGGTTG+AGG 0.495495 8_1:-88133864 None:intergenic
GATCCGAATTTGCAATGATT+CGG 0.498925 8_1:+88137438 Msa1223630:CDS
TGATCTACTAAACAAATCAC+TGG 0.502881 8_1:-88138054 None:intergenic
ATGTTGCAAACAAAACTTGA+AGG 0.503273 8_1:+88137882 Msa1223630:CDS
AAGGAACATAAGGCGGACTT+TGG 0.503753 8_1:+88137637 Msa1223630:CDS
TGGAAAGAGAATTGGCATGC+AGG 0.512907 8_1:+88133687 Msa1223630:CDS
AACATCACGAAACAACAATA+GGG 0.515243 8_1:+88133401 Msa1223630:CDS
ACATCTTCAGAAGGAACATA+AGG 0.518413 8_1:+88137627 Msa1223630:CDS
TTGAGAAGGCAAATGAGATT+GGG 0.520813 8_1:+88137821 Msa1223630:CDS
TCAAATGTGCAAGTGCTGAT+TGG 0.523479 8_1:+88133712 Msa1223630:CDS
TGTGAATTACCAAGTTCTTG+TGG 0.525444 8_1:+88139621 Msa1223630:CDS
TAAGATATTCTTTGCGCAGA+AGG 0.527584 8_1:-88137527 None:intergenic
CAATAGTTTCTTGTTAGTGA+AGG 0.531903 8_1:-88137599 None:intergenic
GAGTCGGTTGATCGAAAGAA+AGG 0.532386 8_1:+88139178 Msa1223630:CDS
CTTACATCTTGAACCAGCAA+TGG 0.535285 8_1:-88137287 None:intergenic
TTATTCAAGTTGCAGGGATG+GGG 0.537384 8_1:+88138919 Msa1223630:intron
AGCAACATCTAAATCTTCCT+AGG 0.540031 8_1:+88138109 Msa1223630:CDS
TTATCGCTGCACTCGTACAC+AGG 0.541180 8_1:-88138747 None:intergenic
AGGCACACAACATACGCAAA+AGG 0.541867 8_1:+88139016 Msa1223630:CDS
GGGAAGGCAATGTTTAAGAA+TGG 0.542245 8_1:+88137174 Msa1223630:CDS
GTTGCAGGGATGGGGTGTAA+GGG 0.547166 8_1:+88138927 Msa1223630:intron
AGCACATTCGAGAATTCCAC+TGG 0.547505 8_1:+88137465 Msa1223630:CDS
TTCTTGCAAAAGGATAAGTT+GGG 0.549639 8_1:-88137322 None:intergenic
ACCGTCTAGTCTTGAATATG+AGG 0.558108 8_1:+88138176 Msa1223630:CDS
AGTTGACATATGCTTGGCAT+CGG 0.559040 8_1:-88137147 None:intergenic
TCTGAGATCTTGTTCAGCAA+AGG 0.560136 8_1:+88137046 Msa1223630:CDS
GGAACCGTGATGTAATGAAA+TGG 0.561523 8_1:+88136819 Msa1223630:CDS
AGTGAAGGACTTAAGACAAA+GGG 0.568530 8_1:-88137584 None:intergenic
CCTAACAGAATATTGCAGAA+TGG 0.571131 8_1:+88138792 Msa1223630:CDS
GATACAAAGTCGGTCATCGA+TGG 0.572908 8_1:+88137493 Msa1223630:CDS
TAATAATGTAGAGCATTTCG+AGG 0.573067 8_1:-88133959 None:intergenic
GAGCAACTAACTTTGTCTGC+CGG 0.578396 8_1:+88137778 Msa1223630:CDS
TTCTCTGAAAATGATTGAGA+AGG 0.583098 8_1:+88137807 Msa1223630:CDS
GCATATGAAACTCATCATGA+AGG 0.584204 8_1:+88133876 Msa1223630:CDS
TATACACATTCTAGACAAGA+AGG 0.584505 8_1:+88136941 Msa1223630:CDS
AAACAAAATTAGGTTATGAG+TGG 0.591606 8_1:+88136789 Msa1223630:CDS
CAATGGTCGAATCATATTGG+AGG 0.593156 8_1:+88138479 Msa1223630:CDS
ACTAGGAAACTCAGTTACCA+TGG 0.596296 8_1:-88136978 None:intergenic
TAGGTTATGAGTGGAAAACA+TGG 0.596310 8_1:+88136798 Msa1223630:CDS
AAAACCATTTCATTACATCA+CGG 0.600373 8_1:-88136823 None:intergenic
TGAACAACCATTTCATCCAA+AGG 0.602379 8_1:-88137082 None:intergenic
ACTAACTTTGTCTGCCGGTG+AGG 0.602807 8_1:+88137783 Msa1223630:CDS
ACATTTGTGTGTGAGTACAT+TGG 0.607393 8_1:+88138973 Msa1223630:CDS
ATCTGCAGAACAAGATACAA+AGG 0.607754 8_1:+88137108 Msa1223630:CDS
ACCTCATATTCAAGACTAGA+CGG 0.608759 8_1:-88138177 None:intergenic
TGATGACATAAGTTGTGGGA+TGG 0.609802 8_1:+88138023 Msa1223630:CDS
TCAGCAAAGGAACAACATCA+AGG 0.612559 8_1:+88137059 Msa1223630:CDS
AAATTTGAAGAAATTTGCAG+TGG 0.615819 8_1:+88137406 Msa1223630:CDS
TATGTGATGACATAAGTTGT+GGG 0.615832 8_1:+88138019 Msa1223630:CDS
GAACTACGGTTTCACTCACT+GGG 0.617287 8_1:-88137012 None:intergenic
AAAGTTCTTACTCCAATCTG+TGG 0.620543 8_1:+88137256 Msa1223630:CDS
TGGATGAGCCTCTGGCTGTG+TGG 0.623709 8_1:+88133460 Msa1223630:CDS
ACTGGGCTGATCAGTTGACT+AGG 0.624997 8_1:-88136995 None:intergenic
CATATGTCAACTCCAAGGGA+AGG 0.626348 8_1:+88137158 Msa1223630:CDS
AATAATGTAGAGCATTTCGA+GGG 0.627317 8_1:-88133958 None:intergenic
ATTGGAATCACATCTTCAGA+AGG 0.627693 8_1:+88137618 Msa1223630:CDS
CCAAGCATATGTCAACTCCA+AGG 0.627818 8_1:+88137153 Msa1223630:CDS
CACCAAGTAAGCCTTCAAGT+TGG 0.632156 8_1:+88136884 Msa1223630:CDS
AGGTACTGTGGAAGTACCCA+TGG 0.632757 8_1:+88136961 Msa1223630:CDS
CAAGCATATGTCAACTCCAA+GGG 0.633163 8_1:+88137154 Msa1223630:CDS
GTTCTTACTCCAATCTGTGG+AGG 0.633901 8_1:+88137259 Msa1223630:CDS
AGATACAAAGGATGGCATTG+TGG 0.635027 8_1:+88137120 Msa1223630:CDS
CTAGGAAACTCAGTTACCAT+GGG 0.635174 8_1:-88136977 None:intergenic
AGAATCTACAGACTGAACTA+CGG 0.638763 8_1:-88137026 None:intergenic
GACTTTGTATCGATCTCCAG+TGG 0.639548 8_1:-88137481 None:intergenic
CTGAAAGCTTAAGTTCGGCA+GGG 0.641893 8_1:-88137747 None:intergenic
AGTAGAATCAATGATATACC+GGG 0.646215 8_1:-88139201 None:intergenic
TAGTGAAGGACTTAAGACAA+AGG 0.646474 8_1:-88137585 None:intergenic
ACCTTGAACCACACAGCCAG+AGG 0.648378 8_1:-88133468 None:intergenic
GCTGGCGAGGCTATTTCGCG+CGG 0.649591 8_1:+88138949 Msa1223630:CDS
GCAGAACAAGATACAAAGGA+TGG 0.649594 8_1:+88137112 Msa1223630:CDS
TTATGTGATGACATAAGTTG+TGG 0.649813 8_1:+88138018 Msa1223630:CDS
GGTTGATCGAAAGAAAGGCC+CGG 0.653782 8_1:+88139183 Msa1223630:CDS
TGTGTGTGAGTACATTGGAG+AGG 0.665032 8_1:+88138978 Msa1223630:CDS
CATGTTGTCATGTTTACATG+AGG 0.666735 8_1:-88137862 None:intergenic
TTCTAGACAAGAAGGTACTG+TGG 0.669717 8_1:+88136949 Msa1223630:CDS
ACTGGAGATCGATACAAAGT+CGG 0.674113 8_1:+88137483 Msa1223630:CDS
CTCGTGTTAATGATATGAGT+CGG 0.676883 8_1:+88139162 Msa1223630:CDS
AAGTTCCCATATGACAACAA+TGG 0.683463 8_1:+88138462 Msa1223630:CDS
TCTTCAGAAGGAACATAAGG+CGG 0.690642 8_1:+88137630 Msa1223630:CDS
CTGGTGCATCATAGAGACTG+TGG 0.698252 8_1:-88136763 None:intergenic
ACATAGGTAAAGTTCAACCA+AGG 0.713958 8_1:-88138132 None:intergenic
TCATATTCAAGACTAGACGG+TGG 0.745783 8_1:-88138174 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTCTATTATAAAAAC+AGG - chr8_1:88136287-88136306 None:intergenic 10.0%
!!! AATATATTTCCATTAATTTT+CGG + chr8_1:88138503-88138522 Msa1223630:intron 10.0%
!!! TTGATTTTTACATCAAATAT+AGG + chr8_1:88134070-88134089 Msa1223630:intron 15.0%
!! ATATATATATGCTTATGAAT+TGG - chr8_1:88134214-88134233 None:intergenic 15.0%
!! TGATAAACATAAGAAAAAAT+AGG + chr8_1:88134507-88134526 Msa1223630:intron 15.0%
!!! TTTTTTTTAAGACACTAAAA+TGG + chr8_1:88134807-88134826 Msa1223630:intron 15.0%
!!! TTTTTTTAAGACACTAAAAT+GGG + chr8_1:88134808-88134827 Msa1223630:intron 15.0%
!! ACTCAATTTATTAATTATAC+AGG - chr8_1:88135169-88135188 None:intergenic 15.0%
!! TATGATAATCATTATCAAAA+AGG - chr8_1:88138407-88138426 None:intergenic 15.0%
!! TTAATAGTATAGGAAAAAAA+AGG - chr8_1:88138671-88138690 None:intergenic 15.0%
!! ATTTATCAAAACAAAAATAG+TGG - chr8_1:88138862-88138881 None:intergenic 15.0%
!!! AACATATAGTTTATTTTAGT+TGG + chr8_1:88139053-88139072 Msa1223630:intron 15.0%
!! TTATGTTTAATAGTTGTATT+TGG - chr8_1:88139527-88139546 None:intergenic 15.0%
!!! ATTTAAAACAAAATGATTGA+TGG + chr8_1:88139562-88139581 Msa1223630:intron 15.0%
!!! ATCTTAATGTATGTTTTTAG+TGG + chr8_1:88133991-88134010 Msa1223630:intron 20.0%
!! TTATTTAGATCTTGGAAAAA+TGG + chr8_1:88134164-88134183 Msa1223630:intron 20.0%
!! ATTGCTACATAAAAGATAAT+TGG + chr8_1:88134302-88134321 Msa1223630:intron 20.0%
!!! TTTGAGCATTATTTGTATTT+TGG - chr8_1:88134363-88134382 None:intergenic 20.0%
!!! AATTATTGTTTTGTATACAC+CGG + chr8_1:88134577-88134596 Msa1223630:intron 20.0%
!!! AATAGCAGTTTGTTTAAATT+CGG + chr8_1:88134662-88134681 Msa1223630:intron 20.0%
!! TGGGATATATATATTAACAA+CGG + chr8_1:88134827-88134846 Msa1223630:intron 20.0%
!! CTTGCAATGAAAAAATAAAT+GGG + chr8_1:88135270-88135289 Msa1223630:intron 20.0%
!!! AGTTTAACTTAGCTTTATTA+GGG - chr8_1:88136008-88136027 None:intergenic 20.0%
!! TATTATAAAAACAGGTTGTT+TGG - chr8_1:88136279-88136298 None:intergenic 20.0%
!!! AACTCTTTTAGAGTAATAAT+AGG - chr8_1:88136581-88136600 None:intergenic 20.0%
!! AGAAACAAAAAAATACACTA+TGG + chr8_1:88136607-88136626 Msa1223630:intron 20.0%
!!! CTTTTAAAATGTATTCATTG+TGG + chr8_1:88137673-88137692 Msa1223630:CDS 20.0%
!! TGTATGATTTGAATTTATGA+TGG - chr8_1:88137968-88137987 None:intergenic 20.0%
!! AATTCAAATCATACAAGATT+AGG + chr8_1:88137973-88137992 Msa1223630:CDS 20.0%
!! ATTCAAATCATACAAGATTA+GGG + chr8_1:88137974-88137993 Msa1223630:CDS 20.0%
!! GTTTAATAAAGAAGCTAAAT+TGG + chr8_1:88138228-88138247 Msa1223630:intron 20.0%
!! GTTGGAAAAAAAAAACTATA+AGG - chr8_1:88138291-88138310 None:intergenic 20.0%
!! AATCATAGGTTAAATATTGT+TGG - chr8_1:88138309-88138328 None:intergenic 20.0%
!!! TAACATAACAACACATATTT+TGG - chr8_1:88138541-88138560 None:intergenic 20.0%
!!! AAAATATGTGTTGTTATGTT+AGG + chr8_1:88138540-88138559 Msa1223630:intron 20.0%
!!! ATTTTTATCTACAAAACTAC+AGG + chr8_1:88138716-88138735 Msa1223630:intron 20.0%
!! TGATAAGACAAAAATTAACA+AGG + chr8_1:88139272-88139291 Msa1223630:intron 20.0%
!! TTATTTACTTCAAGAAATCT+TGG + chr8_1:88139341-88139360 Msa1223630:intron 20.0%
!! GGTCTTCTATATATGAATTT+TGG - chr8_1:88133311-88133330 None:intergenic 25.0%
!! AAGAACTATCATTTTCTGAA+TGG + chr8_1:88133430-88133449 Msa1223630:CDS 25.0%
! ATCGATCAACTTATAAAACA+AGG + chr8_1:88133617-88133636 Msa1223630:intron 25.0%
! TGTAGAGATTACCAAAAATA+GGG - chr8_1:88134039-88134058 None:intergenic 25.0%
! ATGTAGAGATTACCAAAAAT+AGG - chr8_1:88134040-88134059 None:intergenic 25.0%
! TGTCATAGTTATTTAGATCT+TGG + chr8_1:88134156-88134175 Msa1223630:intron 25.0%
!! TTTTATAACTTCCTAACTAG+AGG + chr8_1:88134236-88134255 Msa1223630:intron 25.0%
! ATGCATTATGTTCTGTAAAT+GGG - chr8_1:88134284-88134303 None:intergenic 25.0%
! AATGCATTATGTTCTGTAAA+TGG - chr8_1:88134285-88134304 None:intergenic 25.0%
!!! TCAGGAGGTAATTTTAATTT+TGG + chr8_1:88134396-88134415 Msa1223630:intron 25.0%
! AAACTCTTTAACATAACCAT+AGG + chr8_1:88134544-88134563 Msa1223630:intron 25.0%
! ATAATTAATGTAGACACCTA+TGG - chr8_1:88134563-88134582 None:intergenic 25.0%
!! TATTGACATTCTATTTCTTG+GGG - chr8_1:88134893-88134912 None:intergenic 25.0%
!! GTATTGACATTCTATTTCTT+GGG - chr8_1:88134894-88134913 None:intergenic 25.0%
!! TGTATTGACATTCTATTTCT+TGG - chr8_1:88134895-88134914 None:intergenic 25.0%
! TACAAAATAAAGCCAAAGAA+AGG + chr8_1:88134911-88134930 Msa1223630:intron 25.0%
! AAGTAAAGTTTCATTCCTAT+TGG - chr8_1:88135021-88135040 None:intergenic 25.0%
!! AGTCTTTTCTTCAAATGATT+TGG - chr8_1:88135129-88135148 None:intergenic 25.0%
! AAGAAAAGACTTACGTTTAT+TGG + chr8_1:88135138-88135157 Msa1223630:intron 25.0%
!!! TTTTTTCATTGCAAGGAATT+TGG - chr8_1:88135265-88135284 None:intergenic 25.0%
!!! CCATTTATTTTTTCATTGCA+AGG - chr8_1:88135272-88135291 None:intergenic 25.0%
! CCTTGCAATGAAAAAATAAA+TGG + chr8_1:88135269-88135288 Msa1223630:intron 25.0%
!!! GAGTTTAACTTAGCTTTATT+AGG - chr8_1:88136009-88136028 None:intergenic 25.0%
!! TTTTCTCTAATAGCATAACT+TGG - chr8_1:88136162-88136181 None:intergenic 25.0%
! AAGTTATGCTATTAGAGAAA+AGG + chr8_1:88136161-88136180 Msa1223630:intron 25.0%
! AGTTATGCTATTAGAGAAAA+GGG + chr8_1:88136162-88136181 Msa1223630:intron 25.0%
! ATTGAGTTTGTAGAAAAACA+TGG + chr8_1:88136439-88136458 Msa1223630:intron 25.0%
! TTGAGTTTGTAGAAAAACAT+GGG + chr8_1:88136440-88136459 Msa1223630:intron 25.0%
!!! GATCAAAGTTGTTTGTTATT+TGG - chr8_1:88136672-88136691 None:intergenic 25.0%
! ACAACTTTGATCAATATGTT+TGG + chr8_1:88136680-88136699 Msa1223630:intron 25.0%
!! CATTTTGTATCCTCTTTTTT+AGG + chr8_1:88136709-88136728 Msa1223630:intron 25.0%
! TCAAAGAATTCCTAAAAAAG+AGG - chr8_1:88136722-88136741 None:intergenic 25.0%
!! AATTCTTTGATTCTGTTTTG+TGG + chr8_1:88136732-88136751 Msa1223630:CDS 25.0%
! AAACAAAATTAGGTTATGAG+TGG + chr8_1:88136789-88136808 Msa1223630:CDS 25.0%
! AAAACCATTTCATTACATCA+CGG - chr8_1:88136826-88136845 None:intergenic 25.0%
! AAATTTGAAGAAATTTGCAG+TGG + chr8_1:88137406-88137425 Msa1223630:CDS 25.0%
! TAACCTATGATTTATATAGC+AGG + chr8_1:88138317-88138336 Msa1223630:intron 25.0%
! AACCTATGATTTATATAGCA+GGG + chr8_1:88138318-88138337 Msa1223630:intron 25.0%
! CATAATGCAAAAGACATATT+CGG + chr8_1:88138423-88138442 Msa1223630:CDS 25.0%
! GTTTGGTAAAAACAAATCAA+AGG + chr8_1:88138567-88138586 Msa1223630:intron 25.0%
! TCCTAACATATTTATTGTGT+AGG + chr8_1:88138600-88138619 Msa1223630:intron 25.0%
! TCCTACACAATAAATATGTT+AGG - chr8_1:88138604-88138623 None:intergenic 25.0%
! TAGTATAGGAAAAAAAAGGA+GGG - chr8_1:88138667-88138686 None:intergenic 25.0%
! ATAGTATAGGAAAAAAAAGG+AGG - chr8_1:88138668-88138687 None:intergenic 25.0%
! TGTAGATAAAAATTCAGCAT+TGG - chr8_1:88138709-88138728 None:intergenic 25.0%
!! AGTGTTTAAAACAGAGAAAA+AGG + chr8_1:88138833-88138852 Msa1223630:CDS 25.0%
!!! TTTTAGTTGGTTAATGTTTC+TGG + chr8_1:88139066-88139085 Msa1223630:intron 25.0%
! TAGTAGAATCAATGATATAC+CGG - chr8_1:88139205-88139224 None:intergenic 25.0%
!!! ATCATTGATTCTACTAGATA+TGG + chr8_1:88139209-88139228 Msa1223630:CDS 25.0%
! ATGAATAGTTGACATCAATA+TGG + chr8_1:88139775-88139794 Msa1223630:intron 25.0%
! ATATATGAATTTTGGACACC+AGG - chr8_1:88133303-88133322 None:intergenic 30.0%
! GACGATTTTCAACACAAATA+AGG - chr8_1:88133332-88133351 None:intergenic 30.0%
AAACATCACGAAACAACAAT+AGG + chr8_1:88133400-88133419 Msa1223630:CDS 30.0%
AACATCACGAAACAACAATA+GGG + chr8_1:88133401-88133420 Msa1223630:CDS 30.0%
! ACTATCATTTTCTGAATGGT+TGG + chr8_1:88133434-88133453 Msa1223630:CDS 30.0%
AAGGTATATATATGTGTGTG+TGG + chr8_1:88133486-88133505 Msa1223630:intron 30.0%
!!! TTGGCTTTTATGGTTGATAA+TGG - chr8_1:88133738-88133757 None:intergenic 30.0%
!!! ATTAGTTGGTTTGGCTTTTA+TGG - chr8_1:88133748-88133767 None:intergenic 30.0%
CTCATTATCATTAGTTGGTT+TGG - chr8_1:88133757-88133776 None:intergenic 30.0%
TTCTGCTCATTATCATTAGT+TGG - chr8_1:88133762-88133781 None:intergenic 30.0%
! CATGAATAATTCCTTGTTTC+TGG - chr8_1:88133807-88133826 None:intergenic 30.0%
CAGAAACAAGGAATTATTCA+TGG + chr8_1:88133805-88133824 Msa1223630:CDS 30.0%
TGATGAGTTTCATATGCTAT+AGG - chr8_1:88133873-88133892 None:intergenic 30.0%
TCATCATGAAGGATTGAAAA+TGG + chr8_1:88133887-88133906 Msa1223630:CDS 30.0%
! AATAATGTAGAGCATTTCGA+GGG - chr8_1:88133961-88133980 None:intergenic 30.0%
! TAATAATGTAGAGCATTTCG+AGG - chr8_1:88133962-88133981 None:intergenic 30.0%
AGATTACCAAAAATAGGGAA+TGG - chr8_1:88134034-88134053 None:intergenic 30.0%
CATCTTTGAATGATGAACAA+TGG + chr8_1:88134456-88134475 Msa1223630:intron 30.0%
CTTAAAGGAATAAATAGAGC+CGG - chr8_1:88134599-88134618 None:intergenic 30.0%
GCTTTCATAATTCACCTTAA+AGG - chr8_1:88134614-88134633 None:intergenic 30.0%
GTGAATTATGAAAGCAATAC+TGG + chr8_1:88134619-88134638 Msa1223630:intron 30.0%
CTATATATTGTTCCGCAATA+CGG - chr8_1:88134734-88134753 None:intergenic 30.0%
AGTAAACATTCCTTAGTACA+AGG + chr8_1:88134851-88134870 Msa1223630:intron 30.0%
! AGTAACGTTTCTTTTGTGTA+CGG - chr8_1:88134986-88135005 None:intergenic 30.0%
TAAAGTTTCATTCCTATTGG+TGG - chr8_1:88135018-88135037 None:intergenic 30.0%
ACTTTACTTTATCTAACAGC+TGG + chr8_1:88135032-88135051 Msa1223630:intron 30.0%
CTTTACTTTATCTAACAGCT+GGG + chr8_1:88135033-88135052 Msa1223630:intron 30.0%
CTACAAAAATCAACTTGCAA+CGG - chr8_1:88135360-88135379 None:intergenic 30.0%
AGATAGTTAAGATTAGGGAT+GGG - chr8_1:88135861-88135880 None:intergenic 30.0%
TACTACTGCTTGTTTACAAA+AGG - chr8_1:88136064-88136083 None:intergenic 30.0%
GTTATGCTATTAGAGAAAAG+GGG + chr8_1:88136163-88136182 Msa1223630:intron 30.0%
TTATGCTATTAGAGAAAAGG+GGG + chr8_1:88136164-88136183 Msa1223630:intron 30.0%
! GCTCTAGTTTATACATGAAA+AGG - chr8_1:88136355-88136374 None:intergenic 30.0%
CTACAAACTCAATTATCCAA+CGG - chr8_1:88136432-88136451 None:intergenic 30.0%
TCTCGCTAGTTAATATATGT+CGG + chr8_1:88136514-88136533 Msa1223630:intron 30.0%
!! GTTATTTGGTGTTTAAAGCA+AGG - chr8_1:88136658-88136677 None:intergenic 30.0%
!! TAACCTAATTTTGTTTGTGC+TGG - chr8_1:88136785-88136804 None:intergenic 30.0%
TATACACATTCTAGACAAGA+AGG + chr8_1:88136941-88136960 Msa1223630:CDS 30.0%
TTCTTGCAAAAGGATAAGTT+GGG - chr8_1:88137325-88137344 None:intergenic 30.0%
TTTCTTGCAAAAGGATAAGT+TGG - chr8_1:88137326-88137345 None:intergenic 30.0%
! CTCTTGTTTATATGAGCATT+GGG - chr8_1:88137355-88137374 None:intergenic 30.0%
ATACCGAATCATTGCAAATT+CGG - chr8_1:88137444-88137463 None:intergenic 30.0%
CAATAGTTTCTTGTTAGTGA+AGG - chr8_1:88137602-88137621 None:intergenic 30.0%
CTTCACTAACAAGAAACTAT+TGG + chr8_1:88137600-88137619 Msa1223630:CDS 30.0%
! ATTCATTGTGGTGAACATTT+TGG + chr8_1:88137685-88137704 Msa1223630:CDS 30.0%
TTGGAACTATGGAGAAATTA+TGG + chr8_1:88137704-88137723 Msa1223630:CDS 30.0%
! AGATTCTGAAAGCTTAAGTT+CGG - chr8_1:88137755-88137774 None:intergenic 30.0%
! TTCTCTGAAAATGATTGAGA+AGG + chr8_1:88137807-88137826 Msa1223630:CDS 30.0%
ATGTTGCAAACAAAACTTGA+AGG + chr8_1:88137882-88137901 Msa1223630:CDS 30.0%
TTATGTGATGACATAAGTTG+TGG + chr8_1:88138018-88138037 Msa1223630:CDS 30.0%
TATGTGATGACATAAGTTGT+GGG + chr8_1:88138019-88138038 Msa1223630:CDS 30.0%
TGATCTACTAAACAAATCAC+TGG - chr8_1:88138057-88138076 None:intergenic 30.0%
! CTAAACTCTCTTTTTGAACA+AGG + chr8_1:88138084-88138103 Msa1223630:CDS 30.0%
TAATGACAGCCGAAAATTAA+TGG - chr8_1:88138515-88138534 None:intergenic 30.0%
! TTGTTATGTTAGGCATTGTT+TGG + chr8_1:88138550-88138569 Msa1223630:intron 30.0%
TTATCTACAAAACTACAGGA+AGG + chr8_1:88138720-88138739 Msa1223630:intron 30.0%
! TTTCTGGATTTTTACTGACA+TGG + chr8_1:88139082-88139101 Msa1223630:intron 30.0%
GTCTATGTCAATAACAGTTA+TGG + chr8_1:88139104-88139123 Msa1223630:intron 30.0%
AGTAGAATCAATGATATACC+GGG - chr8_1:88139204-88139223 None:intergenic 30.0%
TGTCTCGATTCATCAATAAT+AGG + chr8_1:88139237-88139256 Msa1223630:CDS 30.0%
! GATGAAAAAGTACAAACACT+TGG + chr8_1:88139456-88139475 Msa1223630:intron 30.0%
ATAGACTACCCGAAATTTAA+CGG + chr8_1:88139487-88139506 Msa1223630:intron 30.0%
TAATCTTGCCCGTTAAATTT+CGG - chr8_1:88139499-88139518 None:intergenic 30.0%
! ATTTAACGGGCAAGATTAAT+AGG + chr8_1:88139501-88139520 Msa1223630:intron 30.0%
! ACTTGGTAATTCACAAGATT+TGG - chr8_1:88139616-88139635 None:intergenic 30.0%
TTCTTGTTAACAGATTGCTT+TGG + chr8_1:88139816-88139835 Msa1223630:intron 30.0%
TCTTGTTAACAGATTGCTTT+GGG + chr8_1:88139817-88139836 Msa1223630:intron 30.0%
! ATCATTTTCTGAATGGTTGG+AGG + chr8_1:88133437-88133456 Msa1223630:CDS 35.0%
TTGTATGTTTGTCTTTGCAG+TGG + chr8_1:88133667-88133686 Msa1223630:intron 35.0%
!!! TCATTTTTTCGCCAGAAACA+AGG + chr8_1:88133793-88133812 Msa1223630:CDS 35.0%
GTTTCATATGCTATAGGTTG+AGG - chr8_1:88133867-88133886 None:intergenic 35.0%
GCATATGAAACTCATCATGA+AGG + chr8_1:88133876-88133895 Msa1223630:CDS 35.0%
AAAAATAGGGAATGGAGAAG+AGG - chr8_1:88134026-88134045 None:intergenic 35.0%
! TCTTCTCCATTCCCTATTTT+TGG + chr8_1:88134025-88134044 Msa1223630:intron 35.0%
ATCTTGGAAAAATGGTTCAG+AGG + chr8_1:88134172-88134191 Msa1223630:intron 35.0%
CGGCTCTATTTATTCCTTTA+AGG + chr8_1:88134597-88134616 Msa1223630:intron 35.0%
TGGATAATATTGTCAAGCAG+CGG - chr8_1:88134707-88134726 None:intergenic 35.0%
ATAACTCTGCTATAGCTTAG+CGG - chr8_1:88134775-88134794 None:intergenic 35.0%
TTATCTAACAGCTGGGAAAT+AGG + chr8_1:88135040-88135059 Msa1223630:intron 35.0%
AAATGCTCTCTAATAGAGAG+AGG + chr8_1:88135190-88135209 Msa1223630:intron 35.0%
AACATATCAGATCGTGGATT+GGG - chr8_1:88135231-88135250 None:intergenic 35.0%
!! GCAAGGAATTTGGTTCTTTA+TGG - chr8_1:88135255-88135274 None:intergenic 35.0%
!!! CGTTGCAAGTTGATTTTTGT+AGG + chr8_1:88135358-88135377 Msa1223630:intron 35.0%
! TCCTTTGAAGGTTTCATTAG+TGG - chr8_1:88135410-88135429 None:intergenic 35.0%
ATGCTACAAGTGATCTTGTT+TGG - chr8_1:88135444-88135463 None:intergenic 35.0%
AGACATGTATCATAGAGGTT+GGG - chr8_1:88135674-88135693 None:intergenic 35.0%
GATAGTTAAGATTAGGGATG+GGG - chr8_1:88135860-88135879 None:intergenic 35.0%
GAGATAGTTAAGATTAGGGA+TGG - chr8_1:88135862-88135881 None:intergenic 35.0%
GAGGGAGATAGTTAAGATTA+GGG - chr8_1:88135866-88135885 None:intergenic 35.0%
!! ACTTAGCTTTATTAGGGAGA+TGG - chr8_1:88136002-88136021 None:intergenic 35.0%
GCTTGTTTACAAAAGGAGTA+CGG - chr8_1:88136057-88136076 None:intergenic 35.0%
TAGCGTTAAGGATTTCATAG+CGG - chr8_1:88136138-88136157 None:intergenic 35.0%
TATGCTATTAGAGAAAAGGG+GGG + chr8_1:88136165-88136184 Msa1223630:intron 35.0%
TCGCTACAACCAACAAAAAT+TGG - chr8_1:88136198-88136217 None:intergenic 35.0%
! TTTGTTGGTTGTAGCGAAAA+TGG + chr8_1:88136201-88136220 Msa1223630:intron 35.0%
AGTTTGTAGAAAAACATGGG+TGG + chr8_1:88136443-88136462 Msa1223630:intron 35.0%
CTCGCTAGTTAATATATGTC+GGG + chr8_1:88136515-88136534 Msa1223630:intron 35.0%
TAGGTTATGAGTGGAAAACA+TGG + chr8_1:88136798-88136817 Msa1223630:CDS 35.0%
AGAATCTACAGACTGAACTA+CGG - chr8_1:88137029-88137048 None:intergenic 35.0%
TGAACAACCATTTCATCCAA+AGG - chr8_1:88137085-88137104 None:intergenic 35.0%
ATCTGCAGAACAAGATACAA+AGG + chr8_1:88137108-88137127 Msa1223630:CDS 35.0%
AAAGTTCTTACTCCAATCTG+TGG + chr8_1:88137256-88137275 Msa1223630:CDS 35.0%
! GCTCTTGTTTATATGAGCAT+TGG - chr8_1:88137356-88137375 None:intergenic 35.0%
TCATTGCAAATTCGGATCTT+CGG - chr8_1:88137436-88137455 None:intergenic 35.0%
GATCCGAATTTGCAATGATT+CGG + chr8_1:88137438-88137457 Msa1223630:CDS 35.0%
TAAGATATTCTTTGCGCAGA+AGG - chr8_1:88137530-88137549 None:intergenic 35.0%
TTCTGCGCAAAGAATATCTT+AGG + chr8_1:88137529-88137548 Msa1223630:CDS 35.0%
AGTGAAGGACTTAAGACAAA+GGG - chr8_1:88137587-88137606 None:intergenic 35.0%
TAGTGAAGGACTTAAGACAA+AGG - chr8_1:88137588-88137607 None:intergenic 35.0%
ATTGGAATCACATCTTCAGA+AGG + chr8_1:88137618-88137637 Msa1223630:CDS 35.0%
ACATCTTCAGAAGGAACATA+AGG + chr8_1:88137627-88137646 Msa1223630:CDS 35.0%
!!! TGGTGAACATTTTGGAACTA+TGG + chr8_1:88137693-88137712 Msa1223630:CDS 35.0%
ATTGAGAAGGCAAATGAGAT+TGG + chr8_1:88137820-88137839 Msa1223630:CDS 35.0%
TTGAGAAGGCAAATGAGATT+GGG + chr8_1:88137821-88137840 Msa1223630:CDS 35.0%
CATGTTGTCATGTTTACATG+AGG - chr8_1:88137865-88137884 None:intergenic 35.0%
AGCAACATCTAAATCTTCCT+AGG + chr8_1:88138109-88138128 Msa1223630:CDS 35.0%
ACATAGGTAAAGTTCAACCA+AGG - chr8_1:88138135-88138154 None:intergenic 35.0%
!! AAGCATCAGTTTTGTCACAT+AGG - chr8_1:88138151-88138170 None:intergenic 35.0%
ACCTCATATTCAAGACTAGA+CGG - chr8_1:88138180-88138199 None:intergenic 35.0%
GACCCTGCTATATAAATCAT+AGG - chr8_1:88138323-88138342 None:intergenic 35.0%
ATCACAAGTTTCACAACAAC+AGG - chr8_1:88138376-88138395 None:intergenic 35.0%
AAGTTCCCATATGACAACAA+TGG + chr8_1:88138462-88138481 Msa1223630:CDS 35.0%
TTCGACCATTGTTGTCATAT+GGG - chr8_1:88138470-88138489 None:intergenic 35.0%
ATTCGACCATTGTTGTCATA+TGG - chr8_1:88138471-88138490 None:intergenic 35.0%
CAACAATGGTCGAATCATAT+TGG + chr8_1:88138476-88138495 Msa1223630:CDS 35.0%
CCATTCTGCAATATTCTGTT+AGG - chr8_1:88138795-88138814 None:intergenic 35.0%
CCTAACAGAATATTGCAGAA+TGG + chr8_1:88138792-88138811 Msa1223630:CDS 35.0%
!! ACTAGCATTATTCAAGTTGC+AGG + chr8_1:88138912-88138931 Msa1223630:intron 35.0%
!! CTAGCATTATTCAAGTTGCA+GGG + chr8_1:88138913-88138932 Msa1223630:intron 35.0%
!! ATTATTCAAGTTGCAGGGAT+GGG + chr8_1:88138918-88138937 Msa1223630:intron 35.0%
ACATTTGTGTGTGAGTACAT+TGG + chr8_1:88138973-88138992 Msa1223630:CDS 35.0%
CTCGTGTTAATGATATGAGT+CGG + chr8_1:88139162-88139181 Msa1223630:CDS 35.0%
! GCAATTTGTTCAGTTACACT+TGG + chr8_1:88139296-88139315 Msa1223630:intron 35.0%
TTACACTTGGCAACATGATT+AGG + chr8_1:88139309-88139328 Msa1223630:intron 35.0%
TAGACTACCCGAAATTTAAC+GGG + chr8_1:88139488-88139507 Msa1223630:intron 35.0%
AATCTTGCCCGTTAAATTTC+GGG - chr8_1:88139498-88139517 None:intergenic 35.0%
TGTGAATTACCAAGTTCTTG+TGG + chr8_1:88139621-88139640 Msa1223630:CDS 35.0%
TGAGTGATATGTACGTATTG+AGG - chr8_1:88139707-88139726 None:intergenic 35.0%
! AATCACTATGAGCTTGTTCT+TGG + chr8_1:88139859-88139878 Msa1223630:CDS 35.0%
! TATGAGCTTGTTCTTGGAAA+AGG + chr8_1:88139865-88139884 Msa1223630:CDS 35.0%
! ATTTTCTGAATGGTTGGAGG+TGG + chr8_1:88133440-88133459 Msa1223630:CDS 40.0%
ACTCACTCGTAAGATGTACT+AGG - chr8_1:88133585-88133604 None:intergenic 40.0%
CTTTGCAGTGGAAAGAGAAT+TGG + chr8_1:88133679-88133698 Msa1223630:intron 40.0%
!! TCAAATGTGCAAGTGCTGAT+TGG + chr8_1:88133712-88133731 Msa1223630:CDS 40.0%
TACTACTTCAGCCTCTAGTT+AGG - chr8_1:88134250-88134269 None:intergenic 40.0%
TCAAACAATAGAGCTGCTTC+AGG + chr8_1:88134378-88134397 Msa1223630:intron 40.0%
ATTATCCACTAGCCGTATTG+CGG + chr8_1:88134719-88134738 Msa1223630:intron 40.0%
!! GGTATCGACTAACCTTTCTT+TGG - chr8_1:88134926-88134945 None:intergenic 40.0%
TCGATACCCAAACACATCAA+AGG + chr8_1:88134938-88134957 Msa1223630:intron 40.0%
CGATACCCAAACACATCAAA+GGG + chr8_1:88134939-88134958 Msa1223630:intron 40.0%
!!! ACTAGCTTTTAGCCACCAAT+AGG + chr8_1:88135003-88135022 Msa1223630:intron 40.0%
TATGGAATGAACGCAACAAC+AGG - chr8_1:88135087-88135106 None:intergenic 40.0%
!! TGCTTGGTGTTTGGCTAATA+TGG - chr8_1:88135105-88135124 None:intergenic 40.0%
! CTTCAAATGATTTGGCTGCT+TGG - chr8_1:88135121-88135140 None:intergenic 40.0%
! ACATATCAGATCGTGGATTG+GGG - chr8_1:88135230-88135249 None:intergenic 40.0%
CAACATATCAGATCGTGGAT+TGG - chr8_1:88135232-88135251 None:intergenic 40.0%
TATGGCAACATATCAGATCG+TGG - chr8_1:88135237-88135256 None:intergenic 40.0%
GATGATATTAGGTGTGTGTC+TGG - chr8_1:88135319-88135338 None:intergenic 40.0%
TGCTTCAGGTCGATGATATT+AGG - chr8_1:88135330-88135349 None:intergenic 40.0%
TGAAGGTTTCATTAGTGGCT+TGG - chr8_1:88135405-88135424 None:intergenic 40.0%
GCCACTAATGAAACCTTCAA+AGG + chr8_1:88135406-88135425 Msa1223630:intron 40.0%
! TGATCTTGTTTGGCACAAAC+AGG - chr8_1:88135434-88135453 None:intergenic 40.0%
CATTAACTGTGTAACCGTCA+CGG + chr8_1:88135509-88135528 Msa1223630:intron 40.0%
! AGGAGAGTGTAGGGATTTAT+TGG - chr8_1:88135590-88135609 None:intergenic 40.0%
TATCATAGAGGTTGGGATGA+GGG - chr8_1:88135667-88135686 None:intergenic 40.0%
CAGACATGTATCATAGAGGT+TGG - chr8_1:88135675-88135694 None:intergenic 40.0%
GTGTCAGACATGTATCATAG+AGG - chr8_1:88135679-88135698 None:intergenic 40.0%
! AGCGTCTGATAAGCTTTGTA+CGG - chr8_1:88135701-88135720 None:intergenic 40.0%
CAGACGCTAAATCAAACAAC+CGG + chr8_1:88135713-88135732 Msa1223630:intron 40.0%
AGACGCTAAATCAAACAACC+GGG + chr8_1:88135714-88135733 Msa1223630:intron 40.0%
!! TTTTGGTTGGATAGGTGGTT+AGG - chr8_1:88135766-88135785 None:intergenic 40.0%
!!! ATACCCTGTTTTGGTTGGAT+AGG - chr8_1:88135774-88135793 None:intergenic 40.0%
!!! GACAAATACCCTGTTTTGGT+TGG - chr8_1:88135779-88135798 None:intergenic 40.0%
! ATGGGACAAATACCCTGTTT+TGG - chr8_1:88135783-88135802 None:intergenic 40.0%
GGAGGGAGATAGTTAAGATT+AGG - chr8_1:88135867-88135886 None:intergenic 40.0%
!! TAGAGGTGGGTTTTGGTATA+GGG - chr8_1:88135959-88135978 None:intergenic 40.0%
!! ATAGAGGTGGGTTTTGGTAT+AGG - chr8_1:88135960-88135979 None:intergenic 40.0%
CTTTATTAGGGAGATGGTGT+TGG - chr8_1:88135996-88136015 None:intergenic 40.0%
! TGTTTACAAAAGGAGTACGG+AGG - chr8_1:88136054-88136073 None:intergenic 40.0%
GCATAACTTGGATAGCGTTA+AGG - chr8_1:88136150-88136169 None:intergenic 40.0%
! GGCGCTATTCCAATTTTTGT+TGG + chr8_1:88136186-88136205 Msa1223630:intron 40.0%
GCACCAGCACAAACAAAATT+AGG + chr8_1:88136779-88136798 Msa1223630:CDS 40.0%
GGAACCGTGATGTAATGAAA+TGG + chr8_1:88136819-88136838 Msa1223630:CDS 40.0%
!! TTCTAGACAAGAAGGTACTG+TGG + chr8_1:88136949-88136968 Msa1223630:CDS 40.0%
CTAGGAAACTCAGTTACCAT+GGG - chr8_1:88136980-88136999 None:intergenic 40.0%
ACTAGGAAACTCAGTTACCA+TGG - chr8_1:88136981-88137000 None:intergenic 40.0%
! TCTGAGATCTTGTTCAGCAA+AGG + chr8_1:88137046-88137065 Msa1223630:CDS 40.0%
TCAGCAAAGGAACAACATCA+AGG + chr8_1:88137059-88137078 Msa1223630:CDS 40.0%
ATCAAGGCCTTTGGATGAAA+TGG + chr8_1:88137075-88137094 Msa1223630:CDS 40.0%
GCAGAACAAGATACAAAGGA+TGG + chr8_1:88137112-88137131 Msa1223630:CDS 40.0%
AGATACAAAGGATGGCATTG+TGG + chr8_1:88137120-88137139 Msa1223630:CDS 40.0%
AGTTGACATATGCTTGGCAT+CGG - chr8_1:88137150-88137169 None:intergenic 40.0%
CAAGCATATGTCAACTCCAA+GGG + chr8_1:88137154-88137173 Msa1223630:CDS 40.0%
TCTTAAACATTGCCTTCCCT+TGG - chr8_1:88137173-88137192 None:intergenic 40.0%
GGGAAGGCAATGTTTAAGAA+TGG + chr8_1:88137174-88137193 Msa1223630:CDS 40.0%
GGGCATATGTTTCTTGCAAA+AGG - chr8_1:88137335-88137354 None:intergenic 40.0%
ACTGGAGATCGATACAAAGT+CGG + chr8_1:88137483-88137502 Msa1223630:CDS 40.0%
TCTTCAGAAGGAACATAAGG+CGG + chr8_1:88137630-88137649 Msa1223630:CDS 40.0%
! CATTTTCAGAGAATCCTCAC+CGG - chr8_1:88137800-88137819 None:intergenic 40.0%
AAGATTAGGGTCAGTGCAAA+AGG + chr8_1:88137987-88138006 Msa1223630:CDS 40.0%
TGATGACATAAGTTGTGGGA+TGG + chr8_1:88138023-88138042 Msa1223630:CDS 40.0%
ATCTAAATCTTCCTAGGCCT+TGG + chr8_1:88138115-88138134 Msa1223630:CDS 40.0%
TCATATTCAAGACTAGACGG+TGG - chr8_1:88138177-88138196 None:intergenic 40.0%
!! ACCGTCTAGTCTTGAATATG+AGG + chr8_1:88138176-88138195 Msa1223630:CDS 40.0%
CAATGGTCGAATCATATTGG+AGG + chr8_1:88138479-88138498 Msa1223630:CDS 40.0%
CTGCAATATTCTGTTAGGAC+AGG - chr8_1:88138790-88138809 None:intergenic 40.0%
!! CATTATTCAAGTTGCAGGGA+TGG + chr8_1:88138917-88138936 Msa1223630:intron 40.0%
!! TTATTCAAGTTGCAGGGATG+GGG + chr8_1:88138919-88138938 Msa1223630:intron 40.0%
GGATTGTAAGCGTCACATAT+TGG + chr8_1:88139651-88139670 Msa1223630:CDS 40.0%
TGGAAAGAGAATTGGCATGC+AGG + chr8_1:88133687-88133706 Msa1223630:CDS 45.0%
GAAAGCTGCTCGTAATGTGA+TGG + chr8_1:88134101-88134120 Msa1223630:intron 45.0%
GTAATGTGATGGTCTGGAAG+CGG + chr8_1:88134112-88134131 Msa1223630:intron 45.0%
AGCTGCATTCATCTGAGTCT+TGG + chr8_1:88134326-88134345 Msa1223630:intron 45.0%
AACAATAGAGCTGCTTCAGG+AGG + chr8_1:88134381-88134400 Msa1223630:intron 45.0%
CCTTGGTACACCTTGTACTA+AGG - chr8_1:88134864-88134883 None:intergenic 45.0%
CCTTAGTACAAGGTGTACCA+AGG + chr8_1:88134861-88134880 Msa1223630:intron 45.0%
ATTTCTTGGGGTGCATTCCT+TGG - chr8_1:88134881-88134900 None:intergenic 45.0%
TCGGACCCTTTGATGTGTTT+GGG - chr8_1:88134947-88134966 None:intergenic 45.0%
TTGTGTACGGTTCTCAGAGA+TGG - chr8_1:88134973-88134992 None:intergenic 45.0%
!! TGATTTGGCTGCTTGGTGTT+TGG - chr8_1:88135114-88135133 None:intergenic 45.0%
ATTAGGTGTGTGTCTGGTTG+CGG - chr8_1:88135313-88135332 None:intergenic 45.0%
AAAATCAACTTGCAACGGCG+CGG - chr8_1:88135355-88135374 None:intergenic 45.0%
CTTGGAGATTGCTGAAAGAC+AGG - chr8_1:88135387-88135406 None:intergenic 45.0%
GCACAAACAGGTTCCTTTGA+AGG - chr8_1:88135422-88135441 None:intergenic 45.0%
ACTTGTAGCATCAACGTCCA+TGG + chr8_1:88135453-88135472 Msa1223630:intron 45.0%
CGTGACGGTTACACAGTTAA+TGG - chr8_1:88135511-88135530 None:intergenic 45.0%
GTATCATAGAGGTTGGGATG+AGG - chr8_1:88135668-88135687 None:intergenic 45.0%
ACCACCTATCCAACCAAAAC+AGG + chr8_1:88135767-88135786 Msa1223630:intron 45.0%
CCACCTATCCAACCAAAACA+GGG + chr8_1:88135768-88135787 Msa1223630:intron 45.0%
GTTAAGATTAGGGATGGGGT+AGG - chr8_1:88135856-88135875 None:intergenic 45.0%
CGAGATATGGTGAGGAGATA+GGG - chr8_1:88135927-88135946 None:intergenic 45.0%
!!! GTTTTGGTATAGGGTGTTGG+TGG - chr8_1:88135950-88135969 None:intergenic 45.0%
!! TGGGTTTTGGTATAGGGTGT+TGG - chr8_1:88135953-88135972 None:intergenic 45.0%
!! TAGTGGATAGAGGTGGGTTT+TGG - chr8_1:88135966-88135985 None:intergenic 45.0%
! GGTTGTTAGTGGATAGAGGT+GGG - chr8_1:88135972-88135991 None:intergenic 45.0%
! AGGTTGTTAGTGGATAGAGG+TGG - chr8_1:88135973-88135992 None:intergenic 45.0%
! TGGAGGTTGTTAGTGGATAG+AGG - chr8_1:88135976-88135995 None:intergenic 45.0%
! ATGGTGTTGGAGGTTGTTAG+TGG - chr8_1:88135983-88136002 None:intergenic 45.0%
! TATTAGGGAGATGGTGTTGG+AGG - chr8_1:88135993-88136012 None:intergenic 45.0%
! AAAAGGAGTACGGAGGTTTG+GGG - chr8_1:88136047-88136066 None:intergenic 45.0%
! CAAAAGGAGTACGGAGGTTT+GGG - chr8_1:88136048-88136067 None:intergenic 45.0%
! ACAAAAGGAGTACGGAGGTT+TGG - chr8_1:88136049-88136068 None:intergenic 45.0%
GTTGGTTGTAGCGAAAATGG+CGG + chr8_1:88136204-88136223 Msa1223630:intron 45.0%
TTGGTTGTAGCGAAAATGGC+GGG + chr8_1:88136205-88136224 Msa1223630:intron 45.0%
! CGAAAATGGCGGGGAAAAAT+TGG + chr8_1:88136215-88136234 Msa1223630:intron 45.0%
CACCAAGTAAGCCTTCAAGT+TGG + chr8_1:88136884-88136903 Msa1223630:CDS 45.0%
TGCCAACTTGAAGGCTTACT+TGG - chr8_1:88136889-88136908 None:intergenic 45.0%
! GCGCGATGAACTTCAAGTTT+AGG - chr8_1:88136920-88136939 None:intergenic 45.0%
GAACTACGGTTTCACTCACT+GGG - chr8_1:88137015-88137034 None:intergenic 45.0%
TGAACTACGGTTTCACTCAC+TGG - chr8_1:88137016-88137035 None:intergenic 45.0%
AGGAACAACATCAAGGCCTT+TGG + chr8_1:88137066-88137085 Msa1223630:CDS 45.0%
CCTTGGAGTTGACATATGCT+TGG - chr8_1:88137156-88137175 None:intergenic 45.0%
CCAAGCATATGTCAACTCCA+AGG + chr8_1:88137153-88137172 Msa1223630:CDS 45.0%
CATATGTCAACTCCAAGGGA+AGG + chr8_1:88137158-88137177 Msa1223630:CDS 45.0%
GTTCTTACTCCAATCTGTGG+AGG + chr8_1:88137259-88137278 Msa1223630:CDS 45.0%
AGCACATTCGAGAATTCCAC+TGG + chr8_1:88137465-88137484 Msa1223630:CDS 45.0%
! GACTTTGTATCGATCTCCAG+TGG - chr8_1:88137484-88137503 None:intergenic 45.0%
GATACAAAGTCGGTCATCGA+TGG + chr8_1:88137493-88137512 Msa1223630:CDS 45.0%
! AAGGAACATAAGGCGGACTT+TGG + chr8_1:88137637-88137656 Msa1223630:CDS 45.0%
CTGAAAGCTTAAGTTCGGCA+GGG - chr8_1:88137750-88137769 None:intergenic 45.0%
TCTGAAAGCTTAAGTTCGGC+AGG - chr8_1:88137751-88137770 None:intergenic 45.0%
GAGCAACTAACTTTGTCTGC+CGG + chr8_1:88137778-88137797 Msa1223630:CDS 45.0%
GTTTACATGAGGCTGCTTCA+TGG - chr8_1:88137854-88137873 None:intergenic 45.0%
! AGATCCTGCAAGCGTTGTAA+TGG + chr8_1:88137924-88137943 Msa1223630:CDS 45.0%
GTAAAGTTCAACCAAGGCCT+AGG - chr8_1:88138129-88138148 None:intergenic 45.0%
GAATGGAATTCGCGTTAAGC+TGG + chr8_1:88138809-88138828 Msa1223630:CDS 45.0%
TGTGTGTGAGTACATTGGAG+AGG + chr8_1:88138978-88138997 Msa1223630:CDS 45.0%
!!! AGAGGTTTTAGACGAGCAAG+AGG + chr8_1:88138996-88139015 Msa1223630:CDS 45.0%
AGGCACACAACATACGCAAA+AGG + chr8_1:88139016-88139035 Msa1223630:CDS 45.0%
GAGTCGGTTGATCGAAAGAA+AGG + chr8_1:88139178-88139197 Msa1223630:CDS 45.0%
!! TATTTATAAATTAATAGTAT+AGG - chr8_1:88138681-88138700 None:intergenic 5.0%
CTGCTCGTAATGTGATGGTC+TGG + chr8_1:88134106-88134125 Msa1223630:intron 50.0%
TTGTTCCGCAATACGGCTAG+TGG - chr8_1:88134727-88134746 None:intergenic 50.0%
GTCGGACCCTTTGATGTGTT+TGG - chr8_1:88134948-88134967 None:intergenic 50.0%
TGTACGGTTCTCAGAGATGG+TGG - chr8_1:88134970-88134989 None:intergenic 50.0%
!! TATCAGATCGTGGATTGGGG+TGG - chr8_1:88135227-88135246 None:intergenic 50.0%
! TCAACGTCCATGGTAGTGAC+TGG + chr8_1:88135463-88135482 Msa1223630:intron 50.0%
GACAACTCCAGTCACTACCA+TGG - chr8_1:88135473-88135492 None:intergenic 50.0%
TGTGTAACCGTCACGGATGT+CGG + chr8_1:88135516-88135535 Msa1223630:intron 50.0%
AGTCTAACGTGTCTGACAGG+TGG - chr8_1:88135552-88135571 None:intergenic 50.0%
TGCAGTCTAACGTGTCTGAC+AGG - chr8_1:88135555-88135574 None:intergenic 50.0%
! GACGATGCTAGGAGAGTGTA+GGG - chr8_1:88135599-88135618 None:intergenic 50.0%
! AGACGATGCTAGGAGAGTGT+AGG - chr8_1:88135600-88135619 None:intergenic 50.0%
TAGGAGATATCCCGCTGTGT+AGG - chr8_1:88135747-88135766 None:intergenic 50.0%
!!! CCCTGTTTTGGTTGGATAGG+TGG - chr8_1:88135771-88135790 None:intergenic 50.0%
! TGGGGTAGGAAATAGTGGGA+GGG - chr8_1:88135842-88135861 None:intergenic 50.0%
! ATGGGGTAGGAAATAGTGGG+AGG - chr8_1:88135843-88135862 None:intergenic 50.0%
GGGATGGGGTAGGAAATAGT+GGG - chr8_1:88135846-88135865 None:intergenic 50.0%
AGGGATGGGGTAGGAAATAG+TGG - chr8_1:88135847-88135866 None:intergenic 50.0%
GAGTGCTTCTTCTTGGTGGA+GGG - chr8_1:88135884-88135903 None:intergenic 50.0%
GATATGGTGAGGAGATAGGG+AGG - chr8_1:88135924-88135943 None:intergenic 50.0%
GCGAGATATGGTGAGGAGAT+AGG - chr8_1:88135928-88135947 None:intergenic 50.0%
! AAAGGAGTACGGAGGTTTGG+GGG - chr8_1:88136046-88136065 None:intergenic 50.0%
TGGTTGTAGCGAAAATGGCG+GGG + chr8_1:88136206-88136225 Msa1223630:intron 50.0%
ATCCCGAGCAGTTCACGAAT+TGG + chr8_1:88136400-88136419 Msa1223630:intron 50.0%
AGCCAATTCGTGAACTGCTC+GGG - chr8_1:88136405-88136424 None:intergenic 50.0%
CAGCCAATTCGTGAACTGCT+CGG - chr8_1:88136406-88136425 None:intergenic 50.0%
AACTAGCGAGAACCTCACGA+GGG - chr8_1:88136505-88136524 None:intergenic 50.0%
TAACTAGCGAGAACCTCACG+AGG - chr8_1:88136506-88136525 None:intergenic 50.0%
CTGGTGCATCATAGAGACTG+TGG - chr8_1:88136766-88136785 None:intergenic 50.0%
!! CAACGTGCTTCTAGCTCTGA+TGG + chr8_1:88136857-88136876 Msa1223630:CDS 50.0%
!! GCCTTCAAGTTGGCAGCAAA+AGG + chr8_1:88136894-88136913 Msa1223630:CDS 50.0%
! GCCTTTTGCTGCCAACTTGA+AGG - chr8_1:88136898-88136917 None:intergenic 50.0%
!! AGGTACTGTGGAAGTACCCA+TGG + chr8_1:88136961-88136980 Msa1223630:CDS 50.0%
ACTGGGCTGATCAGTTGACT+AGG - chr8_1:88136998-88137017 None:intergenic 50.0%
ACTAACTTTGTCTGCCGGTG+AGG + chr8_1:88137783-88137802 Msa1223630:CDS 50.0%
TGCTCCATTACAACGCTTGC+AGG - chr8_1:88137931-88137950 None:intergenic 50.0%
TTATCGCTGCACTCGTACAC+AGG - chr8_1:88138750-88138769 None:intergenic 50.0%
GGTTGATCGAAAGAAAGGCC+CGG + chr8_1:88139183-88139202 Msa1223630:CDS 50.0%
CCATGCTCTCCACAAGAACT+TGG - chr8_1:88139633-88139652 None:intergenic 50.0%
CCAAGTTCTTGTGGAGAGCA+TGG + chr8_1:88139630-88139649 Msa1223630:CDS 50.0%
ACCTTGAACCACACAGCCAG+AGG - chr8_1:88133471-88133490 None:intergenic 55.0%
! CGGTTCTCAGAGATGGTGGT+CGG - chr8_1:88134966-88134985 None:intergenic 55.0%
TGTGTCTGGTTGCGGTATCG+AGG - chr8_1:88135305-88135324 None:intergenic 55.0%
GTGTAACCGTCACGGATGTC+GGG + chr8_1:88135517-88135536 Msa1223630:intron 55.0%
GGGTTGGAGGAGAAGGTTGT+GGG - chr8_1:88135632-88135651 None:intergenic 55.0%
CATAGAGGTTGGGATGAGGG+AGG - chr8_1:88135664-88135683 None:intergenic 55.0%
! CGCTGTGTAGGAGGTTTTCC+CGG - chr8_1:88135735-88135754 None:intergenic 55.0%
CGGGAAAACCTCCTACACAG+CGG + chr8_1:88135733-88135752 Msa1223630:intron 55.0%
GGGAAAACCTCCTACACAGC+GGG + chr8_1:88135734-88135753 Msa1223630:intron 55.0%
GAGATATCCCGCTGTGTAGG+AGG - chr8_1:88135744-88135763 None:intergenic 55.0%
TGTCGAAGGTGATCGGGGAT+GGG - chr8_1:88135801-88135820 None:intergenic 55.0%
!! ACAGGGTGTCGAAGGTGATC+GGG - chr8_1:88135807-88135826 None:intergenic 55.0%
!! GACAGGGTGTCGAAGGTGAT+CGG - chr8_1:88135808-88135827 None:intergenic 55.0%
!! GTTTGCAGACAGGGTGTCGA+AGG - chr8_1:88135815-88135834 None:intergenic 55.0%
! TAGGAAATAGTGGGAGGGGC+TGG - chr8_1:88135837-88135856 None:intergenic 55.0%
! GGGGTAGGAAATAGTGGGAG+GGG - chr8_1:88135841-88135860 None:intergenic 55.0%
! GGAGTGCTTCTTCTTGGTGG+AGG - chr8_1:88135885-88135904 None:intergenic 55.0%
! GACGGAGTGCTTCTTCTTGG+TGG - chr8_1:88135888-88135907 None:intergenic 55.0%
! AGATAGGGAGGTTGGCGGAT+GGG - chr8_1:88135912-88135931 None:intergenic 55.0%
TGAGGAGATAGGGAGGTTGG+CGG - chr8_1:88135917-88135936 None:intergenic 55.0%
TGGTGAGGAGATAGGGAGGT+TGG - chr8_1:88135920-88135939 None:intergenic 55.0%
!! GTTGGTGGCGAGATATGGTG+AGG - chr8_1:88135935-88135954 None:intergenic 55.0%
!! AGGGTGTTGGTGGCGAGATA+TGG - chr8_1:88135940-88135959 None:intergenic 55.0%
CGAGCAGTTCACGAATTGGC+TGG + chr8_1:88136404-88136423 Msa1223630:intron 55.0%
CACGAATTGGCTGGAACCGT+TGG + chr8_1:88136413-88136432 Msa1223630:intron 55.0%
ACTAGCGAGAACCTCACGAG+GGG - chr8_1:88136504-88136523 None:intergenic 55.0%
AGTTGCAGGGATGGGGTGTA+AGG + chr8_1:88138926-88138945 Msa1223630:intron 55.0%
GTTGCAGGGATGGGGTGTAA+GGG + chr8_1:88138927-88138946 Msa1223630:intron 55.0%
GTTGGAGGTGGATGAGCCTC+TGG + chr8_1:88133452-88133471 Msa1223630:CDS 60.0%
TGGATGAGCCTCTGGCTGTG+TGG + chr8_1:88133460-88133479 Msa1223630:CDS 60.0%
GCCTCTGGCTGTGTGGTTCA+AGG + chr8_1:88133467-88133486 Msa1223630:CDS 60.0%
!! AGATCGTGGATTGGGGTGGC+TGG - chr8_1:88135223-88135242 None:intergenic 60.0%
TGGGATCCCGACATCCGTGA+CGG - chr8_1:88135526-88135545 None:intergenic 60.0%
CGTGTCTGACAGGTGGCAGT+GGG - chr8_1:88135545-88135564 None:intergenic 60.0%
ACGTGTCTGACAGGTGGCAG+TGG - chr8_1:88135546-88135565 None:intergenic 60.0%
GAGGAGAAGGTTGTGGGCGT+GGG - chr8_1:88135626-88135645 None:intergenic 60.0%
GGGGTTGGAGGAGAAGGTTG+TGG - chr8_1:88135633-88135652 None:intergenic 60.0%
GTGTCGAAGGTGATCGGGGA+TGG - chr8_1:88135802-88135821 None:intergenic 60.0%
!! CAGGGTGTCGAAGGTGATCG+GGG - chr8_1:88135806-88135825 None:intergenic 60.0%
!! GAGGGGCTGGTTTGCAGACA+GGG - chr8_1:88135824-88135843 None:intergenic 60.0%
! GGGGACGGAGTGCTTCTTCT+TGG - chr8_1:88135891-88135910 None:intergenic 60.0%
! ATAGGGAGGTTGGCGGATGG+GGG - chr8_1:88135910-88135929 None:intergenic 60.0%
! GATAGGGAGGTTGGCGGATG+GGG - chr8_1:88135911-88135930 None:intergenic 60.0%
GAGATAGGGAGGTTGGCGGA+TGG - chr8_1:88135913-88135932 None:intergenic 60.0%
TTTGGGGGTGAGGCGGTTGA+AGG - chr8_1:88136031-88136050 None:intergenic 60.0%
AGTACGGAGGTTTGGGGGTG+AGG - chr8_1:88136041-88136060 None:intergenic 60.0%
CACTTACACGTCCCCTCGTG+AGG + chr8_1:88136490-88136509 Msa1223630:intron 60.0%
GCGTGGGAGGAGACGATGCT+AGG - chr8_1:88135610-88135629 None:intergenic 65.0%
GAGAAGGTTGTGGGCGTGGG+AGG - chr8_1:88135623-88135642 None:intergenic 65.0%
GGAGGAGAAGGTTGTGGGCG+TGG - chr8_1:88135627-88135646 None:intergenic 65.0%
ACGCGTGGGGTTGGAGGAGA+AGG - chr8_1:88135639-88135658 None:intergenic 65.0%
GATGAGGGAGGTGACGCGTG+GGG - chr8_1:88135652-88135671 None:intergenic 65.0%
GGATGAGGGAGGTGACGCGT+GGG - chr8_1:88135653-88135672 None:intergenic 65.0%
!! GGAGGGGCTGGTTTGCAGAC+AGG - chr8_1:88135825-88135844 None:intergenic 65.0%
ACGGAGGTTTGGGGGTGAGG+CGG - chr8_1:88136038-88136057 None:intergenic 65.0%
CAGGGATGGGGTGTAAGGGC+TGG + chr8_1:88138931-88138950 Msa1223630:intron 65.0%
! ATGGGGTGTAAGGGCTGGCG+AGG + chr8_1:88138936-88138955 Msa1223630:CDS 65.0%
! GCTGGCGAGGCTATTTCGCG+CGG + chr8_1:88138949-88138968 Msa1223630:CDS 65.0%
GCAACGGCGCGGTCTGCTTC+AGG - chr8_1:88135344-88135363 None:intergenic 70.0%
GAGGTGACGCGTGGGGTTGG+AGG - chr8_1:88135645-88135664 None:intergenic 70.0%
AGGGAGGTGACGCGTGGGGT+TGG - chr8_1:88135648-88135667 None:intergenic 70.0%
GGGATGAGGGAGGTGACGCG+TGG - chr8_1:88135654-88135673 None:intergenic 70.0%
! GGAGGTTGGCGGATGGGGGA+CGG - chr8_1:88135906-88135925 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 88133288 88139915 88133288 ID=Msa1223630;Name=Msa1223630
chr8_1 mRNA 88133288 88139915 88133288 ID=Msa1223630-mRNA-1;Parent=Msa1223630;Name=Msa1223630-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|9|0|884
chr8_1 exon 88133288 88133488 88133288 ID=Msa1223630-mRNA-1:exon:31980;Parent=Msa1223630-mRNA-1
chr8_1 exon 88133687 88133998 88133687 ID=Msa1223630-mRNA-1:exon:31981;Parent=Msa1223630-mRNA-1
chr8_1 exon 88136731 88138197 88136731 ID=Msa1223630-mRNA-1:exon:31982;Parent=Msa1223630-mRNA-1
chr8_1 exon 88138339 88138500 88138339 ID=Msa1223630-mRNA-1:exon:31983;Parent=Msa1223630-mRNA-1
chr8_1 exon 88138738 88138854 88138738 ID=Msa1223630-mRNA-1:exon:31984;Parent=Msa1223630-mRNA-1
chr8_1 exon 88138934 88139037 88138934 ID=Msa1223630-mRNA-1:exon:31985;Parent=Msa1223630-mRNA-1
chr8_1 exon 88139121 88139258 88139121 ID=Msa1223630-mRNA-1:exon:31986;Parent=Msa1223630-mRNA-1
chr8_1 exon 88139606 88139672 88139606 ID=Msa1223630-mRNA-1:exon:31987;Parent=Msa1223630-mRNA-1
chr8_1 exon 88139829 88139915 88139829 ID=Msa1223630-mRNA-1:exon:31988;Parent=Msa1223630-mRNA-1
chr8_1 CDS 88133288 88133488 88133288 ID=Msa1223630-mRNA-1:cds;Parent=Msa1223630-mRNA-1
chr8_1 CDS 88133687 88133998 88133687 ID=Msa1223630-mRNA-1:cds;Parent=Msa1223630-mRNA-1
chr8_1 CDS 88136731 88138197 88136731 ID=Msa1223630-mRNA-1:cds;Parent=Msa1223630-mRNA-1
chr8_1 CDS 88138339 88138500 88138339 ID=Msa1223630-mRNA-1:cds;Parent=Msa1223630-mRNA-1
chr8_1 CDS 88138738 88138854 88138738 ID=Msa1223630-mRNA-1:cds;Parent=Msa1223630-mRNA-1
chr8_1 CDS 88138934 88139037 88138934 ID=Msa1223630-mRNA-1:cds;Parent=Msa1223630-mRNA-1
chr8_1 CDS 88139121 88139258 88139121 ID=Msa1223630-mRNA-1:cds;Parent=Msa1223630-mRNA-1
chr8_1 CDS 88139606 88139672 88139606 ID=Msa1223630-mRNA-1:cds;Parent=Msa1223630-mRNA-1
chr8_1 CDS 88139829 88139915 88139829 ID=Msa1223630-mRNA-1:cds;Parent=Msa1223630-mRNA-1
Gene Sequence

>Msa1223630

ATGGATATGCTTCCTGGTGTCCAAAATTCATATATAGAAGACCTTATTTGTGTTGAAAATCGTCAAGATGACATTTTCAAATTTGATGAAGAAGTCATTGAAGTTGAACGCGAAACATCACGAAACAACAATAGGGAAGAAGAAGAACTATCATTTTCTGAATGGTTGGAGGTGGATGAGCCTCTGGCTGTGTGGTTCAAGTGGAAAGAGAATTGGCATGCAGGAATCAAATGTGCAAGTGCTGATTGGCCATTATCAACCATAAAAGCCAAACCAACTAATGATAATGAGCAGAACAAATATATTGTCATTTTTTCGCCAGAAACAAGGAATTATTCATGGATTGATATGCTTCTTGTTAAATCAATTGATGAGTTTCCTCAACCTATAGCATATGAAACTCATCATGAAGGATTGAAAATGGTACAAGACTTGACGATTGCGCGACAATTTATTATGATGCAAAAGCTCGCCCTCGAAATGCTCTACATTATTAATCAGTTTCATCTTAATGAATTCTTTGATTCTGTTTTGTGGAATGATGTCCACAGTCTCTATGATGCACCAGCACAAACAAAATTAGGTTATGAGTGGAAAACATGGAACCGTGATGTAATGAAATGGTTTTCAACATTTACGCAACGTGCTTCTAGCTCTGATGGAATGCACCAAGTAAGCCTTCAAGTTGGCAGCAAAAGGCCTAAACTTGAAGTTCATCGCGCATATACACATTCTAGACAAGAAGGTACTGTGGAAGTACCCATGGTAACTGAGTTTCCTAGTCAACTGATCAGCCCAGTGAGTGAAACCGTAGTTCAGTCTGTAGATTCTGAGATCTTGTTCAGCAAAGGAACAACATCAAGGCCTTTGGATGAAATGGTTGTTCAAGTATCTGCAGAACAAGATACAAAGGATGGCATTGTGGAACGCCGATGCCAAGCATATGTCAACTCCAAGGGAAGGCAATGTTTAAGAATGGCGATTCGTAATAATTTATATTGTTGTGCACATTTTTCAATTAAAAAAGAAAAATGTGTTAAAGTTCTTACTCCAATCTGTGGAGGAACAACCATTGCTGGTTCAAGATGTAAGAATCATTCTCTTCCCAACTTATCCTTTTGCAAGAAACATATGCCCAATGCTCATATAAACAAGAGCTCAAATTCAAATTGTAGTACGTTGAAGAGAAAATTTGAAGAAATTTGCAGTGGTTTTCCGAAGATCCGAATTTGCAATGATTCGGTATTAGCACATTCGAGAATTCCACTGGAGATCGATACAAAGTCGGTCATCGATGGTGAAGATGAATCCTTCTGCGCAAAGAATATCTTAGGCAAAACACTCATGCTTTCTAGTTATGCTTGTGCCCTTTGTCTTAAGTCCTTCACTAACAAGAAACTATTGGAATCACATCTTCAGAAGGAACATAAGGCGGACTTTGGTGAACACTTGTTGCTTTTAAAATGTATTCATTGTGGTGAACATTTTGGAACTATGGAGAAATTATGGTTGCATGTTAAGTCAGTTCACCCTGCCGAACTTAAGCTTTCAGAATCTCATGAGCAACTAACTTTGTCTGCCGGTGAGGATTCTCTGAAAATGATTGAGAAGGCAAATGAGATTGGGCAAACATCCATGAAGCAGCCTCATGTAAACATGACAACATGTTGCAAACAAAACTTGAAGGAAAAATCTACAAATTCATTAGATCCTGCAAGCGTTGTAATGGAGCAAGATCAGTCTCAATCCATCATAAATTCAAATCATACAAGATTAGGGTCAGTGCAAAAGGCTCTAGTGTTATGTGATGACATAAGTTGTGGGATGGAATCAACTCCAGTGATTTGTTTAGTAGATCAAAAAATACTAAACTCTCTTTTTGAACAAGGAGAGCAACATCTAAATCTTCCTAGGCCTTGGTTGAACTTTACCTATGTGACAAAACTGATGCTTCGTCCACCGTCTAGTCTTGAATATGAGGGTCAACAACTGAAATGTTATTGCTCGTCTTCTACCTGTTGTTGTGAAACTTGTGATCATGTGTACCTTTTTGATAATGATTATCATAATGCAAAAGACATATTCGGAAAAGCAATGCGCGAAAAGTTCCCATATGACAACAATGGTCGAATCATATTGGAGGAAGGTTATCCTGTGTACGAGTGCAGCGATAAGTGCAGATGTAATAAAACCTGTCCTAACAGAATATTGCAGAATGGAATTCGCGTTAAGCTGGAAGTGTTTAAAACAGAGAAAAAGGGATGGGGTGTAAGGGCTGGCGAGGCTATTTCGCGCGGAACATTTGTGTGTGAGTACATTGGAGAGGTTTTAGACGAGCAAGAGGCACACAACATACGCAAAAGTTATGGAAAAGAACATTGCAGTTATTTCTATGTTATTGATGCTCGTGTTAATGATATGAGTCGGTTGATCGAAAGAAAGGCCCGGTATATCATTGATTCTACTAGATATGGAAATGTGTCTCGATTCATCAATAATAGTTGTTCACCAAATCTTGTGAATTACCAAGTTCTTGTGGAGAGCATGGATTGTAAGCGTCACATATTGATTGCTTTGGGTGAAGAACTGACATGTTATAATCACTATGAGCTTGTTCTTGGAAAAGGATCTCATTGTATTTGTAGATCTTCGTAA
Protein sequence

>Msa1223630

MDMLPGVQNSYIEDLICVENRQDDIFKFDEEVIEVERETSRNNNREEEELSFSEWLEVDEPLAVWFKWKENWHAGIKCASADWPLSTIKAKPTNDNEQNKYIVIFSPETRNYSWIDMLLVKSIDEFPQPIAYETHHEGLKMVQDLTIARQFIMMQKLALEMLYIINQFHLNEFFDSVLWNDVHSLYDAPAQTKLGYEWKTWNRDVMKWFSTFTQRASSSDGMHQVSLQVGSKRPKLEVHRAYTHSRQEGTVEVPMVTEFPSQLISPVSETVVQSVDSEILFSKGTTSRPLDEMVVQVSAEQDTKDGIVERRCQAYVNSKGRQCLRMAIRNNLYCCAHFSIKKEKCVKVLTPICGGTTIAGSRCKNHSLPNLSFCKKHMPNAHINKSSNSNCSTLKRKFEEICSGFPKIRICNDSVLAHSRIPLEIDTKSVIDGEDESFCAKNILGKTLMLSSYACALCLKSFTNKKLLESHLQKEHKADFGEHLLLLKCIHCGEHFGTMEKLWLHVKSVHPAELKLSESHEQLTLSAGEDSLKMIEKANEIGQTSMKQPHVNMTTCCKQNLKEKSTNSLDPASVVMEQDQSQSIINSNHTRLGSVQKALVLCDDISCGMESTPVICLVDQKILNSLFEQGEQHLNLPRPWLNFTYVTKLMLRPPSSLEYEGQQLKCYCSSSTCCCETCDHVYLFDNDYHNAKDIFGKAMREKFPYDNNGRIILEEGYPVYECSDKCRCNKTCPNRILQNGIRVKLEVFKTEKKGWGVRAGEAISRGTFVCEYIGEVLDEQEAHNIRKSYGKEHCSYFYVIDARVNDMSRLIERKARYIIDSTRYGNVSRFINNSCSPNLVNYQVLVESMDCKRHILIALGEELTCYNHYELVLGKGSHCICRSS*