AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1228300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1228300 MtrunA17_Chr8g0335131 97.059 306 5 2 1 303 1 305 0.0 607
Msa1228300 MtrunA17_Chr5g0399491 59.283 307 95 11 3 301 4 288 2.81e-100 296
Msa1228300 MtrunA17_Chr4g0055851 58.446 296 88 10 1 294 3 265 4.62e-96 285
Msa1228300 MtrunA17_Chr7g0258831 65.775 187 49 4 75 257 98 273 2.26e-71 222
Msa1228300 MtrunA17_Chr1g0175651 70.625 160 28 4 100 259 129 269 1.18e-67 213
Msa1228300 MtrunA17_Chr2g0308611 74.648 142 31 2 126 267 187 323 5.56e-66 210
Msa1228300 MtrunA17_Chr4g0054421 74.809 131 27 2 126 256 115 239 4.18e-64 203
Msa1228300 MtrunA17_Chr5g0400781 76.667 120 27 1 137 256 117 235 3.64e-62 198
Msa1228300 MtrunA17_Chr1g0151971 54.913 173 64 6 88 257 84 245 4.34e-53 175
Msa1228300 MtrunA17_Chr4g0044091 63.710 124 40 1 137 255 59 182 6.76e-50 164
Msa1228300 MtrunA17_Chr2g0299031 57.031 128 48 1 129 256 75 195 4.92e-43 147
Msa1228300 MtrunA17_Chr3g0135331 64.516 124 42 2 142 265 144 265 5.99e-43 149
Msa1228300 MtrunA17_Chr4g0071411 62.281 114 40 1 145 255 90 203 8.54e-38 133
Msa1228300 MtrunA17_Chr6g0450991 43.519 108 61 0 140 247 64 171 2.65e-19 85.9
Msa1228300 MtrunA17_Chr7g0217111 47.222 108 48 2 129 232 71 173 2.93e-19 85.5
Msa1228300 MtrunA17_Chr5g0416391 47.059 102 48 1 129 230 69 164 4.25e-19 85.5
Msa1228300 MtrunA17_Chr6g0453021 40.164 122 73 0 109 230 62 183 1.56e-18 83.6
Msa1228300 MtrunA17_Chr4g0060031 45.690 116 61 1 117 230 67 182 1.89e-18 84.3
Msa1228300 MtrunA17_Chr8g0362151 45.545 101 49 1 129 229 69 163 2.72e-18 83.2
Msa1228300 MtrunA17_Chr5g0415941 48.515 101 44 2 143 236 87 186 7.51e-18 82.4
Msa1228300 MtrunA17_Chr3g0119291 38.571 140 81 2 143 278 59 197 4.58e-17 79.3
Msa1228300 MtrunA17_Chr3g0123691 40.152 132 68 4 133 254 49 179 6.12e-17 79.7
Msa1228300 MtrunA17_Chr7g0265521 43.158 95 53 1 137 230 56 150 8.01e-17 78.2
Msa1228300 MtrunA17_Chr8g0381741 38.971 136 72 3 142 270 53 184 2.71e-16 77.8
Msa1228300 MtrunA17_Chr8g0362751 46.809 94 43 1 143 229 89 182 6.21e-16 76.6
Msa1228300 MtrunA17_Chr1g0179581 45.455 88 47 1 138 225 24 110 7.39e-16 72.4
Msa1228300 MtrunA17_Chr5g0403691 42.593 108 59 2 132 237 43 149 1.06e-12 66.2
Msa1228300 MtrunA17_Chr5g0403701 41.667 108 57 2 130 237 41 142 1.37e-12 65.9
Msa1228300 MtrunA17_Chr3g0127511 41.935 93 47 1 146 231 41 133 1.70e-11 63.2
Msa1228300 MtrunA17_Chr8g0346251 32.836 134 75 2 147 280 45 163 3.74e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1228300 AT3G60390.1 59.459 296 93 8 16 300 30 309 1.19e-103 305
Msa1228300 AT5G47370.1 54.194 310 87 13 1 298 3 269 8.39e-91 272
Msa1228300 AT2G44910.1 55.963 327 107 12 1 301 1 316 1.54e-89 270
Msa1228300 AT4G16780.1 56.623 302 85 10 1 293 2 266 2.03e-85 258
Msa1228300 AT4G17460.1 54.392 296 107 10 1 286 3 280 6.81e-84 254
Msa1228300 AT5G06710.1 66.138 189 49 5 87 268 134 314 5.98e-73 228
Msa1228300 AT4G37790.1 60.795 176 59 3 117 292 106 271 1.03e-65 207
Msa1228300 AT2G22800.1 75.833 120 28 1 137 256 107 225 4.45e-61 196
Msa1228300 AT2G01430.1 43.320 247 132 5 35 278 29 270 3.80e-50 167
Msa1228300 AT1G70920.2 56.028 141 48 2 127 267 29 155 3.68e-41 141
Msa1228300 AT1G70920.1 56.028 141 48 2 127 267 59 185 4.37e-41 142
Msa1228300 AT5G06710.4 55.906 127 34 5 75 194 130 241 6.48e-30 114
Msa1228300 AT1G69780.1 44.118 136 66 2 95 230 47 172 5.94e-22 94.0
Msa1228300 AT2G01430.2 53.846 91 39 2 106 194 101 190 7.29e-22 91.7
Msa1228300 AT1G26960.1 44.444 117 56 2 117 230 48 158 4.33e-19 85.1
Msa1228300 AT3G01470.1 48.387 93 41 1 143 228 68 160 1.33e-17 81.3
Msa1228300 AT5G65310.1 42.478 113 58 1 125 230 54 166 4.45e-17 80.5
Msa1228300 AT5G65310.2 42.478 113 58 1 125 230 36 148 5.97e-17 79.7
Msa1228300 AT5G15150.1 47.872 94 45 1 143 232 115 208 4.63e-16 77.8
Msa1228300 AT3G01220.1 45.745 94 47 1 143 232 87 180 2.12e-15 75.5
Msa1228300 AT5G03790.1 43.820 89 50 0 143 231 77 165 2.84e-15 74.3
Msa1228300 AT2G18550.1 43.137 102 53 1 137 238 55 151 8.50e-15 72.4
Msa1228300 AT4G40060.1 43.299 97 48 1 141 230 57 153 1.44e-14 73.2
Msa1228300 AT1G27045.4 45.833 96 45 1 143 231 68 163 2.71e-14 71.6
Msa1228300 AT1G27045.1 56.061 66 29 0 143 208 68 133 4.50e-14 70.5
Msa1228300 AT2G22430.1 45.833 96 48 1 141 232 60 155 4.83e-14 71.6
Msa1228300 AT1G27045.5 56.061 66 29 0 143 208 25 90 5.64e-14 69.3
Msa1228300 AT1G27045.3 56.061 66 29 0 143 208 25 90 5.64e-14 69.3
Msa1228300 AT1G27045.2 56.061 66 29 0 143 208 17 82 5.84e-14 69.3
Msa1228300 AT2G36610.1 36.937 111 58 2 133 231 57 167 2.22e-13 67.8
Msa1228300 AT2G46680.1 42.105 95 51 1 146 236 35 129 5.31e-13 68.2
Msa1228300 AT2G46680.2 42.045 88 51 0 146 233 35 122 6.05e-13 67.8
Msa1228300 AT4G36740.2 40.385 104 55 2 135 238 50 146 6.14e-13 67.4
Msa1228300 AT4G36740.1 40.385 104 55 2 135 238 49 145 6.54e-13 67.0
Msa1228300 AT5G03790.2 41.758 91 53 0 143 233 77 167 2.10e-12 65.1
Msa1228300 AT3G61890.1 33.333 126 84 0 146 271 33 158 1.87e-11 63.2
Msa1228300 AT5G06710.2 42.478 113 43 5 75 180 130 227 2.41e-11 63.2
Msa1228300 AT5G06710.3 42.478 113 43 5 75 180 130 227 2.41e-11 63.2

Find 126 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATGGTCGGGAACGATTT+TGG 0.169525 8_2:-3794469 None:intergenic
CAGAGCATTAGGTGGGTTTA+TGG 0.175789 8_2:-3791984 None:intergenic
TTATAGTATCAATATGATTT+TGG 0.193608 8_2:+3791827 None:intergenic
AAGAAGGGAAGGACAGAAAA+TGG 0.263745 8_2:-3792049 None:intergenic
TAACCTTGAAAGGATGAAAA+AGG 0.268132 8_2:+3794825 Msa1228300:three_prime_UTR
GAAAGATGATGAATTTAGTT+TGG 0.275241 8_2:+3792149 Msa1228300:CDS
ACTTTAGAGTGTGTAAAGTT+TGG 0.319254 8_2:+3794749 Msa1228300:three_prime_UTR
CACTTCAGTTTGCTTCAACT+TGG 0.366945 8_2:-3794162 None:intergenic
TTAAGCTTGAGTTTAGGATT+TGG 0.367633 8_2:+3792174 Msa1228300:CDS
AAAGATGATGAATTTAGTTT+GGG 0.373079 8_2:+3792150 Msa1228300:CDS
CTTTGGTTTGTAACCGTTTG+AGG 0.393528 8_2:-3792255 None:intergenic
GCTAGACAAATGTGTATGTT+TGG 0.400019 8_2:+3794543 Msa1228300:three_prime_UTR
TCTGCTTCAGCCAGCCCGTC+AGG 0.405875 8_2:+3794395 Msa1228300:CDS
AAAAGGAAGTGCAAGAGCTT+AGG 0.411234 8_2:+3794243 Msa1228300:CDS
TTGGGTTTAAGCTTGAGTTT+AGG 0.412484 8_2:+3792168 Msa1228300:CDS
GGCCAACACCTGTCAACCCT+TGG 0.414534 8_2:+3794432 Msa1228300:CDS
TTTGTGCATGTTTGGTATCA+AGG 0.418072 8_2:-3794631 None:intergenic
AGTGTATGTCACAGAGCATT+AGG 0.422088 8_2:-3791995 None:intergenic
TATAAGAAATGGAGGAAAGA+TGG 0.424033 8_2:-3791954 None:intergenic
CTATATATAGATACATACTA+TGG 0.429771 8_2:-3791929 None:intergenic
GAGTCACCTTCAAAGGAGTT+TGG 0.430355 8_2:-3792218 None:intergenic
AACCACACCTCCACTTGTCT+TGG 0.434860 8_2:-3793475 None:intergenic
TGGATGGGGTTGGGCAGCTA+TGG 0.436143 8_2:-3792029 None:intergenic
TCGCTCTAGATCCTAGTAGT+AGG 0.437773 8_2:+3794495 Msa1228300:three_prime_UTR
GACAGAAAATGGATGGGGTT+GGG 0.438980 8_2:-3792038 None:intergenic
AAAGGAAGTGCAAGAGCTTA+GGG 0.439484 8_2:+3794244 Msa1228300:CDS
AGTTATTGAAGGAAACCCTT+TGG 0.441554 8_2:-3792272 None:intergenic
CAACAACCAAACTCCTTTGA+AGG 0.444372 8_2:+3792212 Msa1228300:CDS
ATCGTCGGCCGTCGCCGCCA+TGG 0.452006 8_2:-3792881 None:intergenic
GTTGTTGGAAGAAACTTTCA+AGG 0.454317 8_2:+3793110 Msa1228300:CDS
ATGGAGAACAGTATAAGAAA+TGG 0.455065 8_2:-3791965 None:intergenic
ATGCTTGACACGGTGCTGTT+CGG 0.456039 8_2:-3792922 None:intergenic
AGCAGCAGCAGCTGCTGATG+AGG 0.465286 8_2:-3794366 None:intergenic
TTTAATTTATTAACCTTGAA+AGG 0.467349 8_2:+3794815 Msa1228300:three_prime_UTR
AAGTTTGGAAATGTTAAAGT+AGG 0.470317 8_2:+3794764 Msa1228300:three_prime_UTR
GCCCAAGGGTTGACAGGTGT+TGG 0.475640 8_2:-3794434 None:intergenic
CGTTGAACACTTGGTCCTGA+CGG 0.477048 8_2:-3794410 None:intergenic
TTTGCACTTTACTTTAGTGT+TGG 0.478083 8_2:+3794670 Msa1228300:three_prime_UTR
GGTGTTGGCCGTTGAACACT+TGG 0.478877 8_2:-3794419 None:intergenic
GCCAACACCTGTCAACCCTT+GGG 0.479663 8_2:+3794433 Msa1228300:CDS
CGCTCTAGATCCTAGTAGTA+GGG 0.480212 8_2:+3794496 Msa1228300:three_prime_UTR
GATGATGACGGCGGAGGTTG+CGG 0.480696 8_2:+3793033 Msa1228300:CDS
AGACTCTAACTGATGAGAAT+AGG 0.482124 8_2:+3794213 Msa1228300:CDS
GGCGGAGGTTGCGGTGGCGA+CGG 0.488707 8_2:+3793042 Msa1228300:CDS
GTTGAACACTTGGTCCTGAC+GGG 0.490686 8_2:-3794409 None:intergenic
TTGAGTAAAACATGTTCTCT+AGG 0.495487 8_2:-3794727 None:intergenic
GGTTCATGTTCTCGCGGCGG+CGG 0.496150 8_2:+3793003 Msa1228300:CDS
AGTAGTAGGGTAATGTAGGC+AGG 0.497613 8_2:+3794509 Msa1228300:three_prime_UTR
GAAGGAACAGTCAATGTTGT+TGG 0.498061 8_2:+3793095 Msa1228300:CDS
TCTAGGCCCAAAATAAGAAA+AGG 0.498219 8_2:-3794710 None:intergenic
AATGTGTATGTTTGGATTCG+CGG 0.503128 8_2:+3794551 Msa1228300:three_prime_UTR
TTCATTTGCATGTAGAGTTG+TGG 0.503551 8_2:-3794281 None:intergenic
ATTGCCGCCCAAGGGTTGAC+AGG 0.506370 8_2:-3794440 None:intergenic
TCATTTCTCCGCGGAATAGA+CGG 0.512734 8_2:+3792841 Msa1228300:CDS
TGAAAACGACGCCGTCGAAA+GGG 0.514530 8_2:+3792981 Msa1228300:CDS
CTTTCCACTGATGCTTGACA+CGG 0.517994 8_2:-3792932 None:intergenic
GGACAGAAAATGGATGGGGT+TGG 0.520522 8_2:-3792039 None:intergenic
AAAATGGAACAAGTTATTGA+AGG 0.520682 8_2:-3792283 None:intergenic
TGGATAGATATTGCCGCCCA+AGG 0.520721 8_2:-3794449 None:intergenic
AGGGAAGGACAGAAAATGGA+TGG 0.521815 8_2:-3792045 None:intergenic
TCCTAGTAGTAGGGTAATGT+AGG 0.522460 8_2:+3794505 Msa1228300:three_prime_UTR
AGAAGCGAAAGAGAAGGAAA+CGG 0.525139 8_2:+3792955 Msa1228300:CDS
TCGGCCGTCGCCGCCATGGA+TGG 0.525546 8_2:-3792877 None:intergenic
CATGCACAAGCCTCCTCAAA+CGG 0.530251 8_2:+3792242 Msa1228300:CDS
GGAGCATAATACTCTGAATC+CGG 0.531921 8_2:+3793131 Msa1228300:CDS
TATGGAGAAGAGAAATGAAA+GGG 0.532221 8_2:-3791911 None:intergenic
GCGACGGCCGACGATGAAAA+CGG 0.538257 8_2:+3792889 Msa1228300:CDS
TGACGGGCTGGCTGAAGCAG+AGG 0.542905 8_2:-3794393 None:intergenic
TGCATGTGAGTCACCTTCAA+AGG 0.543980 8_2:-3792225 None:intergenic
ATAAGAAATGGAGGAAAGAT+GGG 0.544830 8_2:-3791953 None:intergenic
ACTACCATCCATGGCGGCGA+CGG 0.547385 8_2:+3792873 Msa1228300:CDS
CAACACTCCACTACCATCCA+TGG 0.551656 8_2:+3792864 Msa1228300:CDS
TAGAGCGAATACTCATGGTC+GGG 0.553208 8_2:-3794480 None:intergenic
CTCTAACTGATGAGAATAGG+AGG 0.555223 8_2:+3794216 Msa1228300:CDS
TCAGAAACAAAAGCAAGCAT+TGG 0.557840 8_2:+3793432 Msa1228300:intron
GTCGCCGCCATGGATGGTAG+TGG 0.558543 8_2:-3792871 None:intergenic
GAGAACAGTATAAGAAATGG+AGG 0.560086 8_2:-3791962 None:intergenic
GGAAAGAGAAGCGAAAGAGA+AGG 0.564040 8_2:+3792949 Msa1228300:CDS
TGAGAATAGGAGGTTGCAAA+AGG 0.565911 8_2:+3794226 Msa1228300:CDS
GCCTACATTACCCTACTACT+AGG 0.568684 8_2:-3794506 None:intergenic
CTCAAACGGTTACAAACCAA+AGG 0.569424 8_2:+3792256 Msa1228300:CDS
GACGGGCTGGCTGAAGCAGA+GGG 0.570000 8_2:-3794392 None:intergenic
GGATCTAGAGCGAATACTCA+TGG 0.570023 8_2:-3794485 None:intergenic
ATGAAAACGACGCCGTCGAA+AGG 0.571630 8_2:+3792980 Msa1228300:CDS
GGGCACATTGTAAGAGTGGT+GGG 0.573198 8_2:-3794308 None:intergenic
CAAGTTGAAGCAAACTGAAG+TGG 0.573772 8_2:+3794163 Msa1228300:CDS
CTAGAGCGAATACTCATGGT+CGG 0.575049 8_2:-3794481 None:intergenic
CTATGGAGAAGAGAAATGAA+AGG 0.581254 8_2:-3791912 None:intergenic
GGGAAGGACAGAAAATGGAT+GGG 0.582014 8_2:-3792044 None:intergenic
GGATAGATATTGCCGCCCAA+GGG 0.583254 8_2:-3794448 None:intergenic
TGGGCAGCTATGGACTATGA+TGG 0.585257 8_2:-3792019 None:intergenic
CGAAGGGCACATTGTAAGAG+TGG 0.588926 8_2:-3794312 None:intergenic
AACACCTGTCAACCCTTGGG+CGG 0.591322 8_2:+3794436 Msa1228300:CDS
TCAAACGGTTACAAACCAAA+GGG 0.592760 8_2:+3792257 Msa1228300:CDS
ACATTGTAAGAGTGGTGGGA+GGG 0.595529 8_2:-3794304 None:intergenic
GGAAGGACAGAAAATGGATG+GGG 0.596500 8_2:-3792043 None:intergenic
ACGGCGACACGCTCGCACGA+AGG 0.599222 8_2:-3794329 None:intergenic
AGCCAAGACAAGTGGAGGTG+TGG 0.599876 8_2:+3793473 Msa1228300:CDS
TGGTTTGTAACCGTTTGAGG+AGG 0.599884 8_2:-3792252 None:intergenic
AGCACCGTGTCAAGCATCAG+TGG 0.602338 8_2:+3792928 Msa1228300:CDS
AGGGCACATTGTAAGAGTGG+TGG 0.603305 8_2:-3794309 None:intergenic
CGTCAGGACCAAGTGTTCAA+CGG 0.606766 8_2:+3794411 Msa1228300:CDS
AGAACATGAACCCCTTTCGA+CGG 0.611067 8_2:-3792992 None:intergenic
CACATTGTAAGAGTGGTGGG+AGG 0.613092 8_2:-3794305 None:intergenic
GAAAACGACGCCGTCGAAAG+GGG 0.619048 8_2:+3792982 Msa1228300:CDS
TATGTCACAGAGCATTAGGT+GGG 0.619304 8_2:-3791991 None:intergenic
GTGGCGACGGTGATTCGTCA+AGG 0.623006 8_2:+3793055 Msa1228300:CDS
AAGGTATTAAGAAGAAGGGA+AGG 0.624463 8_2:-3792060 None:intergenic
GAATCTGAAGCCAAGACAAG+TGG 0.625066 8_2:+3793465 Msa1228300:CDS
GTAGTAGGGTAATGTAGGCA+GGG 0.627228 8_2:+3794510 Msa1228300:three_prime_UTR
GTATGTCACAGAGCATTAGG+TGG 0.628711 8_2:-3791992 None:intergenic
GATGACGGCGGAGGTTGCGG+TGG 0.629392 8_2:+3793036 Msa1228300:CDS
GAAGAAGCTGAGGTTGTCGA+AGG 0.629748 8_2:+3793077 Msa1228300:CDS
GGGCTGGCTGAAGCAGAGGG+AGG 0.634297 8_2:-3794389 None:intergenic
AGTGATGATGATGACGGCGG+AGG 0.634764 8_2:+3793027 Msa1228300:CDS
TCTGAAGCCAAGACAAGTGG+AGG 0.635230 8_2:+3793468 Msa1228300:CDS
ATTCGTCAAGGAAGAAGCTG+AGG 0.662832 8_2:+3793067 Msa1228300:CDS
GAAAGGGGTTCATGTTCTCG+CGG 0.668678 8_2:+3792997 Msa1228300:CDS
GGCGGAAGTGATGATGATGA+CGG 0.668902 8_2:+3793021 Msa1228300:CDS
GGTTTCAAAACAGAAGAGCA+AGG 0.676969 8_2:+3793494 Msa1228300:CDS
CAGATCTAAGCACAGAAACG+AGG 0.678976 8_2:+3792818 Msa1228300:intron
TGAGGACGATGCAGATGACA+CGG 0.688825 8_2:-3794348 None:intergenic
AGGGGTTCATGTTCTCGCGG+CGG 0.699189 8_2:+3793000 Msa1228300:CDS
CACTCCACTACCATCCATGG+CGG 0.704044 8_2:+3792867 Msa1228300:CDS
GGAAGTGATGATGATGACGG+CGG 0.716365 8_2:+3793024 Msa1228300:CDS
GAAACGAGGTCATTTCTCCG+CGG 0.771153 8_2:+3792832 Msa1228300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATAAAAAAAAAAAAA+TGG - chr8_2:3792577-3792596 None:intergenic 0.0%
!!! CATTTTTGTTTTTTTTTTTT+TGG + chr8_2:3792482-3792501 Msa1228300:intron 10.0%
!! AAAAGAAAAAAGAAACAAAA+AGG - chr8_2:3792082-3792101 None:intergenic 15.0%
!!! ATTTCTCTTCATATTTTTTA+GGG + chr8_2:3792437-3792456 Msa1228300:intron 15.0%
!! AAAAAACAAAAATGAGAAAT+GGG - chr8_2:3792476-3792495 None:intergenic 15.0%
!! AAAAAAACAAAAATGAGAAA+TGG - chr8_2:3792477-3792496 None:intergenic 15.0%
!!! TTTTTCATTATATGATTCAA+GGG - chr8_2:3792550-3792569 None:intergenic 15.0%
!! ATCAGAAAGTAAATTAAAAT+GGG - chr8_2:3792691-3792710 None:intergenic 15.0%
!! AATCAGAAAGTAAATTAAAA+TGG - chr8_2:3792692-3792711 None:intergenic 15.0%
!! GTAATTATCAACTAAATTTA+AGG - chr8_2:3792760-3792779 None:intergenic 15.0%
!!! TTGTTTTTATTATTGTTTTG+AGG + chr8_2:3793276-3793295 Msa1228300:intron 15.0%
!!! GTCATTTTTGAATATTAATT+TGG + chr8_2:3793546-3793565 Msa1228300:intron 15.0%
!!! TTATTATAATCTTTTGATGA+TGG + chr8_2:3793905-3793924 Msa1228300:intron 15.0%
!!! TTTAATTTATTAACCTTGAA+AGG + chr8_2:3794815-3794834 Msa1228300:three_prime_UTR 15.0%
!! CTATATATAGATACATACTA+TGG - chr8_2:3791932-3791951 None:intergenic 20.0%
!! AAATTCAAACGAGAAAAAAA+TGG + chr8_2:3792122-3792141 Msa1228300:exon 20.0%
!! AATTCAAACGAGAAAAAAAT+GGG + chr8_2:3792123-3792142 Msa1228300:exon 20.0%
!!! AAAGATGATGAATTTAGTTT+GGG + chr8_2:3792150-3792169 Msa1228300:CDS 20.0%
!! TGGAAAAAAAAATTGAAGAA+AGG - chr8_2:3792347-3792366 None:intergenic 20.0%
!! CGAATTAAAAATGAAAAGAA+TGG - chr8_2:3792367-3792386 None:intergenic 20.0%
!!! GATTTCTCTTCATATTTTTT+AGG + chr8_2:3792436-3792455 Msa1228300:intron 20.0%
!! AAAAACAAAAATGAGAAATG+GGG - chr8_2:3792475-3792494 None:intergenic 20.0%
!!! TTTTTTTTTTTTTGGGTGAA+TGG + chr8_2:3792490-3792509 Msa1228300:intron 20.0%
!!! GTTTTTCATTATATGATTCA+AGG - chr8_2:3792551-3792570 None:intergenic 20.0%
!!! TGTAATTCAGTTTTATGTTA+AGG + chr8_2:3793177-3793196 Msa1228300:intron 20.0%
!!! GTAATTCAGTTTTATGTTAA+GGG + chr8_2:3793178-3793197 Msa1228300:intron 20.0%
!!! TATATTTGGAAGTGTAAATT+TGG + chr8_2:3793233-3793252 Msa1228300:intron 20.0%
!!! TTTTTTTGGTTGAGTAATTA+AGG + chr8_2:3793317-3793336 Msa1228300:intron 20.0%
!! TGTAAACTCTTAAAATTGAA+AGG - chr8_2:3793953-3793972 None:intergenic 20.0%
!!! CAAAAAGGTATTAAGAAGAA+GGG - chr8_2:3792067-3792086 None:intergenic 25.0%
!!! ACAAAAAGGTATTAAGAAGA+AGG - chr8_2:3792068-3792087 None:intergenic 25.0%
! GAAAGATGATGAATTTAGTT+TGG + chr8_2:3792149-3792168 Msa1228300:CDS 25.0%
! AAAATGGAACAAGTTATTGA+AGG - chr8_2:3792286-3792305 None:intergenic 25.0%
!!! AATAACTTGTTCCATTTTCA+TGG + chr8_2:3792288-3792307 Msa1228300:CDS 25.0%
! GAAAAAACATACCATGAAAA+TGG - chr8_2:3792302-3792321 None:intergenic 25.0%
! TATGAAGAGAAATCAAGAAT+GGG - chr8_2:3792430-3792449 None:intergenic 25.0%
! ATATGAAGAGAAATCAAGAA+TGG - chr8_2:3792431-3792450 None:intergenic 25.0%
! TTCATCTCATCAAAGAAAAT+GGG - chr8_2:3792646-3792665 None:intergenic 25.0%
! ATTCATCTCATCAAAGAAAA+TGG - chr8_2:3792647-3792666 None:intergenic 25.0%
!! TTTTATGTTAAGGGCTTATT+TGG + chr8_2:3793187-3793206 Msa1228300:intron 25.0%
!! CTTATTTGGAATTTCATTAC+AGG + chr8_2:3793201-3793220 Msa1228300:intron 25.0%
! GAATTTCATTACAGGATAAA+AGG + chr8_2:3793209-3793228 Msa1228300:intron 25.0%
! ACCAAAAAAAAAAACAACCT+CGG - chr8_2:3793307-3793326 None:intergenic 25.0%
! ACTGTTTGGATCATATTAAT+TGG + chr8_2:3793667-3793686 Msa1228300:intron 25.0%
!! AACACAACTTAACTTTTATG+AGG + chr8_2:3793781-3793800 Msa1228300:intron 25.0%
!! ACACAACTTAACTTTTATGA+GGG + chr8_2:3793782-3793801 Msa1228300:intron 25.0%
! TTATGAGGGAGTAAAAAATT+AGG + chr8_2:3793796-3793815 Msa1228300:intron 25.0%
!!! ATAATCTTTTGATGATGGAT+TGG + chr8_2:3793910-3793929 Msa1228300:intron 25.0%
!!! TAATCTTTTGATGATGGATT+GGG + chr8_2:3793911-3793930 Msa1228300:intron 25.0%
! AAGTTTGGAAATGTTAAAGT+AGG + chr8_2:3794764-3794783 Msa1228300:three_prime_UTR 25.0%
TATGGAGAAGAGAAATGAAA+GGG - chr8_2:3791914-3791933 None:intergenic 30.0%
ATAAGAAATGGAGGAAAGAT+GGG - chr8_2:3791956-3791975 None:intergenic 30.0%
TATAAGAAATGGAGGAAAGA+TGG - chr8_2:3791957-3791976 None:intergenic 30.0%
ATGGAGAACAGTATAAGAAA+TGG - chr8_2:3791968-3791987 None:intergenic 30.0%
!! TCGTTTGAATTTTGAAGAAG+GGG - chr8_2:3792114-3792133 None:intergenic 30.0%
!! CTCGTTTGAATTTTGAAGAA+GGG - chr8_2:3792115-3792134 None:intergenic 30.0%
!! TCTCGTTTGAATTTTGAAGA+AGG - chr8_2:3792116-3792135 None:intergenic 30.0%
! TTAAGCTTGAGTTTAGGATT+TGG + chr8_2:3792174-3792193 Msa1228300:CDS 30.0%
!!! TTTTTTTTGGGTGAATGGTA+AGG + chr8_2:3792495-3792514 Msa1228300:intron 30.0%
!!! TTTTTTTGGGTGAATGGTAA+GGG + chr8_2:3792496-3792515 Msa1228300:intron 30.0%
GTTATACCAAAAATGAGAAG+GGG - chr8_2:3792528-3792547 None:intergenic 30.0%
GGTTATACCAAAAATGAGAA+GGG - chr8_2:3792529-3792548 None:intergenic 30.0%
ACAGGATAAAAGGCTATATT+TGG + chr8_2:3793219-3793238 Msa1228300:intron 30.0%
!!! TCCGAGGTTGTTTTTTTTTT+TGG + chr8_2:3793303-3793322 Msa1228300:intron 30.0%
TAAACATTGTTGTGATGTTG+TGG + chr8_2:3793580-3793599 Msa1228300:intron 30.0%
TAATATGATCCAAACAGTGT+GGG - chr8_2:3793665-3793684 None:intergenic 30.0%
TTAATATGATCCAAACAGTG+TGG - chr8_2:3793666-3793685 None:intergenic 30.0%
GTTGTATTGTAACAAGTATG+TGG + chr8_2:3793836-3793855 Msa1228300:intron 30.0%
! TTGTAGCTTTTGTAGAATCA+TGG + chr8_2:3794579-3794598 Msa1228300:three_prime_UTR 30.0%
!! GATTCATTTTTGTGCATGTT+TGG - chr8_2:3794642-3794661 None:intergenic 30.0%
TTTGCACTTTACTTTAGTGT+TGG + chr8_2:3794670-3794689 Msa1228300:three_prime_UTR 30.0%
!! AGTCTAGCCTTTTCTTATTT+TGG + chr8_2:3794703-3794722 Msa1228300:three_prime_UTR 30.0%
!!! GTCTAGCCTTTTCTTATTTT+GGG + chr8_2:3794704-3794723 Msa1228300:three_prime_UTR 30.0%
TTGAGTAAAACATGTTCTCT+AGG - chr8_2:3794730-3794749 None:intergenic 30.0%
!! ACTTTAGAGTGTGTAAAGTT+TGG + chr8_2:3794749-3794768 Msa1228300:three_prime_UTR 30.0%
TAACCTTGAAAGGATGAAAA+AGG + chr8_2:3794825-3794844 Msa1228300:three_prime_UTR 30.0%
CTATGGAGAAGAGAAATGAA+AGG - chr8_2:3791915-3791934 None:intergenic 35.0%
GAGAACAGTATAAGAAATGG+AGG - chr8_2:3791965-3791984 None:intergenic 35.0%
! AAGGTATTAAGAAGAAGGGA+AGG - chr8_2:3792063-3792082 None:intergenic 35.0%
!! TTTGAATTTTGAAGAAGGGG+AGG - chr8_2:3792111-3792130 None:intergenic 35.0%
TTGGGTTTAAGCTTGAGTTT+AGG + chr8_2:3792168-3792187 Msa1228300:CDS 35.0%
TCAAACGGTTACAAACCAAA+GGG + chr8_2:3792257-3792276 Msa1228300:CDS 35.0%
AGTTATTGAAGGAAACCCTT+TGG - chr8_2:3792275-3792294 None:intergenic 35.0%
!!! TTTTTTGGGTGAATGGTAAG+GGG + chr8_2:3792497-3792516 Msa1228300:intron 35.0%
GGGTTATACCAAAAATGAGA+AGG - chr8_2:3792530-3792549 None:intergenic 35.0%
!! TTTGCATGTGAGTGTTTTAG+TGG - chr8_2:3792790-3792809 None:intergenic 35.0%
GTTGTTGGAAGAAACTTTCA+AGG + chr8_2:3793110-3793129 Msa1228300:CDS 35.0%
!!! ATTGTTTTGAGGTTATTCCG+AGG + chr8_2:3793287-3793306 Msa1228300:intron 35.0%
TCAGAAACAAAAGCAAGCAT+TGG + chr8_2:3793432-3793451 Msa1228300:intron 35.0%
AATATGATCCAAACAGTGTG+GGG - chr8_2:3793664-3793683 None:intergenic 35.0%
CATGTACAAACCAATGTATG+TGG + chr8_2:3794032-3794051 Msa1228300:intron 35.0%
CACAACAAATCCACATACAT+TGG - chr8_2:3794045-3794064 None:intergenic 35.0%
TATTGTGTTCCATGCTGTTA+TGG + chr8_2:3794092-3794111 Msa1228300:intron 35.0%
! TTTTTCCTTCCATAACAGCA+TGG - chr8_2:3794104-3794123 None:intergenic 35.0%
AAAATGTGACATGAGTGCTT+TGG + chr8_2:3794124-3794143 Msa1228300:intron 35.0%
AGACTCTAACTGATGAGAAT+AGG + chr8_2:3794213-3794232 Msa1228300:CDS 35.0%
TTCATTTGCATGTAGAGTTG+TGG - chr8_2:3794284-3794303 None:intergenic 35.0%
GCTAGACAAATGTGTATGTT+TGG + chr8_2:3794543-3794562 Msa1228300:three_prime_UTR 35.0%
AATGTGTATGTTTGGATTCG+CGG + chr8_2:3794551-3794570 Msa1228300:three_prime_UTR 35.0%
TTTGTGCATGTTTGGTATCA+AGG - chr8_2:3794634-3794653 None:intergenic 35.0%
TCTAGGCCCAAAATAAGAAA+AGG - chr8_2:3794713-3794732 None:intergenic 35.0%
!! TCTCCTTTTTCATCCTTTCA+AGG - chr8_2:3794831-3794850 None:intergenic 35.0%
! TATGTCACAGAGCATTAGGT+GGG - chr8_2:3791994-3792013 None:intergenic 40.0%
! AGTGTATGTCACAGAGCATT+AGG - chr8_2:3791998-3792017 None:intergenic 40.0%
AAGAAGGGAAGGACAGAAAA+TGG - chr8_2:3792052-3792071 None:intergenic 40.0%
CAACAACCAAACTCCTTTGA+AGG + chr8_2:3792212-3792231 Msa1228300:CDS 40.0%
!! CTTTGGTTTGTAACCGTTTG+AGG - chr8_2:3792258-3792277 None:intergenic 40.0%
CTCAAACGGTTACAAACCAA+AGG + chr8_2:3792256-3792275 Msa1228300:CDS 40.0%
! GAAAAGCCCCTTCTCATTTT+TGG + chr8_2:3792519-3792538 Msa1228300:intron 40.0%
! TGAAACTCCGTTTTCATCGT+CGG - chr8_2:3792899-3792918 None:intergenic 40.0%
AGAAGCGAAAGAGAAGGAAA+CGG + chr8_2:3792955-3792974 Msa1228300:CDS 40.0%
GAAGGAACAGTCAATGTTGT+TGG + chr8_2:3793095-3793114 Msa1228300:CDS 40.0%
GGAGCATAATACTCTGAATC+CGG + chr8_2:3793131-3793150 Msa1228300:CDS 40.0%
TACCACTACAACAAACTCAC+CGG - chr8_2:3793153-3793172 None:intergenic 40.0%
GGTTTCAAAACAGAAGAGCA+AGG + chr8_2:3793494-3793513 Msa1228300:CDS 40.0%
ACAGTGTGGGGTATATAGTA+TGG - chr8_2:3793652-3793671 None:intergenic 40.0%
ACTATATACCCCACACTGTT+TGG + chr8_2:3793653-3793672 Msa1228300:intron 40.0%
TGTGGCAACATGAGTATGTT+AGG + chr8_2:3793854-3793873 Msa1228300:intron 40.0%
GTGGCAACATGAGTATGTTA+GGG + chr8_2:3793855-3793874 Msa1228300:intron 40.0%
! CTTTTGTGCATGTAGTAGGT+GGG - chr8_2:3793881-3793900 None:intergenic 40.0%
! CATGCTTTTGTGCATGTAGT+AGG - chr8_2:3793885-3793904 None:intergenic 40.0%
!!! CTTTTGATGATGGATTGGGA+AGG + chr8_2:3793915-3793934 Msa1228300:intron 40.0%
! CACTTCAGTTTGCTTCAACT+TGG - chr8_2:3794165-3794184 None:intergenic 40.0%
! CAAGTTGAAGCAAACTGAAG+TGG + chr8_2:3794163-3794182 Msa1228300:CDS 40.0%
CTCTAACTGATGAGAATAGG+AGG + chr8_2:3794216-3794235 Msa1228300:CDS 40.0%
TGAGAATAGGAGGTTGCAAA+AGG + chr8_2:3794226-3794245 Msa1228300:CDS 40.0%
! AAAAGGAAGTGCAAGAGCTT+AGG + chr8_2:3794243-3794262 Msa1228300:CDS 40.0%
! AAAGGAAGTGCAAGAGCTTA+GGG + chr8_2:3794244-3794263 Msa1228300:CDS 40.0%
TCCTAGTAGTAGGGTAATGT+AGG + chr8_2:3794505-3794524 Msa1228300:three_prime_UTR 40.0%
! CAGAGCATTAGGTGGGTTTA+TGG - chr8_2:3791987-3792006 None:intergenic 45.0%
! GTATGTCACAGAGCATTAGG+TGG - chr8_2:3791995-3792014 None:intergenic 45.0%
GACAGAAAATGGATGGGGTT+GGG - chr8_2:3792041-3792060 None:intergenic 45.0%
GGAAGGACAGAAAATGGATG+GGG - chr8_2:3792046-3792065 None:intergenic 45.0%
GGGAAGGACAGAAAATGGAT+GGG - chr8_2:3792047-3792066 None:intergenic 45.0%
AGGGAAGGACAGAAAATGGA+TGG - chr8_2:3792048-3792067 None:intergenic 45.0%
GAGTCACCTTCAAAGGAGTT+TGG - chr8_2:3792221-3792240 None:intergenic 45.0%
TGCATGTGAGTCACCTTCAA+AGG - chr8_2:3792228-3792247 None:intergenic 45.0%
! TGGTTTGTAACCGTTTGAGG+AGG - chr8_2:3792255-3792274 None:intergenic 45.0%
CAGATCTAAGCACAGAAACG+AGG + chr8_2:3792818-3792837 Msa1228300:intron 45.0%
TCATTTCTCCGCGGAATAGA+CGG + chr8_2:3792841-3792860 Msa1228300:CDS 45.0%
CTTTCCACTGATGCTTGACA+CGG - chr8_2:3792935-3792954 None:intergenic 45.0%
GGAAAGAGAAGCGAAAGAGA+AGG + chr8_2:3792949-3792968 Msa1228300:CDS 45.0%
AGAACATGAACCCCTTTCGA+CGG - chr8_2:3792995-3793014 None:intergenic 45.0%
ATTCGTCAAGGAAGAAGCTG+AGG + chr8_2:3793067-3793086 Msa1228300:CDS 45.0%
!! ATCCGGTGAGTTTGTTGTAG+TGG + chr8_2:3793148-3793167 Msa1228300:intron 45.0%
! GAATCTGAAGCCAAGACAAG+TGG + chr8_2:3793465-3793484 Msa1228300:CDS 45.0%
AGGTGAGCTTTCTTCTTCTC+AGG + chr8_2:3793514-3793533 Msa1228300:intron 45.0%
GGTGAGCTTTCTTCTTCTCA+GGG + chr8_2:3793515-3793534 Msa1228300:intron 45.0%
GTGAGCTTTCTTCTTCTCAG+GGG + chr8_2:3793516-3793535 Msa1228300:intron 45.0%
! GCTTTTGTGCATGTAGTAGG+TGG - chr8_2:3793882-3793901 None:intergenic 45.0%
GTGTTCCATGCTGTTATGGA+AGG + chr8_2:3794096-3794115 Msa1228300:intron 45.0%
! GTGCTTTGGTTCAATGATGC+AGG + chr8_2:3794138-3794157 Msa1228300:intron 45.0%
! ACATTGTAAGAGTGGTGGGA+GGG - chr8_2:3794307-3794326 None:intergenic 45.0%
TAGAGCGAATACTCATGGTC+GGG - chr8_2:3794483-3794502 None:intergenic 45.0%
CTAGAGCGAATACTCATGGT+CGG - chr8_2:3794484-3794503 None:intergenic 45.0%
! GGATCTAGAGCGAATACTCA+TGG - chr8_2:3794488-3794507 None:intergenic 45.0%
! TCGCTCTAGATCCTAGTAGT+AGG + chr8_2:3794495-3794514 Msa1228300:three_prime_UTR 45.0%
! CGCTCTAGATCCTAGTAGTA+GGG + chr8_2:3794496-3794515 Msa1228300:three_prime_UTR 45.0%
GCCTACATTACCCTACTACT+AGG - chr8_2:3794509-3794528 None:intergenic 45.0%
AGTAGTAGGGTAATGTAGGC+AGG + chr8_2:3794509-3794528 Msa1228300:three_prime_UTR 45.0%
GTAGTAGGGTAATGTAGGCA+GGG + chr8_2:3794510-3794529 Msa1228300:three_prime_UTR 45.0%
!!! ATTTTTGTTTTTTTTTTTTT+GGG + chr8_2:3792483-3792502 Msa1228300:intron 5.0%
!! TATTTATTTATGAATTAAAA+CGG + chr8_2:3792715-3792734 Msa1228300:intron 5.0%
! TGGGCAGCTATGGACTATGA+TGG - chr8_2:3792022-3792041 None:intergenic 50.0%
GGACAGAAAATGGATGGGGT+TGG - chr8_2:3792042-3792061 None:intergenic 50.0%
CATGCACAAGCCTCCTCAAA+CGG + chr8_2:3792242-3792261 Msa1228300:CDS 50.0%
GAAACGAGGTCATTTCTCCG+CGG + chr8_2:3792832-3792851 Msa1228300:CDS 50.0%
CAACACTCCACTACCATCCA+TGG + chr8_2:3792864-3792883 Msa1228300:CDS 50.0%
!! ATGCTTGACACGGTGCTGTT+CGG - chr8_2:3792925-3792944 None:intergenic 50.0%
ATGAAAACGACGCCGTCGAA+AGG + chr8_2:3792980-3792999 Msa1228300:CDS 50.0%
TGAAAACGACGCCGTCGAAA+GGG + chr8_2:3792981-3793000 Msa1228300:CDS 50.0%
GAAAGGGGTTCATGTTCTCG+CGG + chr8_2:3792997-3793016 Msa1228300:CDS 50.0%
! GGCGGAAGTGATGATGATGA+CGG + chr8_2:3793021-3793040 Msa1228300:CDS 50.0%
!! GGAAGTGATGATGATGACGG+CGG + chr8_2:3793024-3793043 Msa1228300:CDS 50.0%
GAAGAAGCTGAGGTTGTCGA+AGG + chr8_2:3793077-3793096 Msa1228300:CDS 50.0%
! TCTGAAGCCAAGACAAGTGG+AGG + chr8_2:3793468-3793487 Msa1228300:CDS 50.0%
AACCACACCTCCACTTGTCT+TGG - chr8_2:3793478-3793497 None:intergenic 50.0%
! CACATTGTAAGAGTGGTGGG+AGG - chr8_2:3794308-3794327 None:intergenic 50.0%
GGGCACATTGTAAGAGTGGT+GGG - chr8_2:3794311-3794330 None:intergenic 50.0%
AGGGCACATTGTAAGAGTGG+TGG - chr8_2:3794312-3794331 None:intergenic 50.0%
! CGAAGGGCACATTGTAAGAG+TGG - chr8_2:3794315-3794334 None:intergenic 50.0%
TGAGGACGATGCAGATGACA+CGG - chr8_2:3794351-3794370 None:intergenic 50.0%
GTTGAACACTTGGTCCTGAC+GGG - chr8_2:3794412-3794431 None:intergenic 50.0%
CGTTGAACACTTGGTCCTGA+CGG - chr8_2:3794413-3794432 None:intergenic 50.0%
CGTCAGGACCAAGTGTTCAA+CGG + chr8_2:3794411-3794430 Msa1228300:CDS 50.0%
GGATAGATATTGCCGCCCAA+GGG - chr8_2:3794451-3794470 None:intergenic 50.0%
TGGATAGATATTGCCGCCCA+AGG - chr8_2:3794452-3794471 None:intergenic 50.0%
! CTCATGGTCGGGAACGATTT+TGG - chr8_2:3794472-3794491 None:intergenic 50.0%
! GAGTGTTGCCGTCTATTCCG+CGG - chr8_2:3792852-3792871 None:intergenic 55.0%
CACTCCACTACCATCCATGG+CGG + chr8_2:3792867-3792886 Msa1228300:CDS 55.0%
AGCACCGTGTCAAGCATCAG+TGG + chr8_2:3792928-3792947 Msa1228300:CDS 55.0%
GAAAACGACGCCGTCGAAAG+GGG + chr8_2:3792982-3793001 Msa1228300:CDS 55.0%
!! AGTGATGATGATGACGGCGG+AGG + chr8_2:3793027-3793046 Msa1228300:CDS 55.0%
AGCCAAGACAAGTGGAGGTG+TGG + chr8_2:3793473-3793492 Msa1228300:CDS 55.0%
!! GGTGTTGGCCGTTGAACACT+TGG - chr8_2:3794422-3794441 None:intergenic 55.0%
GCCAACACCTGTCAACCCTT+GGG + chr8_2:3794433-3794452 Msa1228300:CDS 55.0%
AACACCTGTCAACCCTTGGG+CGG + chr8_2:3794436-3794455 Msa1228300:CDS 55.0%
TGGATGGGGTTGGGCAGCTA+TGG - chr8_2:3792032-3792051 None:intergenic 60.0%
ACTACCATCCATGGCGGCGA+CGG + chr8_2:3792873-3792892 Msa1228300:CDS 60.0%
GCGACGGCCGACGATGAAAA+CGG + chr8_2:3792889-3792908 Msa1228300:CDS 60.0%
AGGGGTTCATGTTCTCGCGG+CGG + chr8_2:3793000-3793019 Msa1228300:CDS 60.0%
!! GATGATGACGGCGGAGGTTG+CGG + chr8_2:3793033-3793052 Msa1228300:CDS 60.0%
GTGGCGACGGTGATTCGTCA+AGG + chr8_2:3793055-3793074 Msa1228300:CDS 60.0%
AGCAGCAGCAGCTGCTGATG+AGG - chr8_2:3794369-3794388 None:intergenic 60.0%
! AACACTTGGTCCTGACGGGC+TGG - chr8_2:3794408-3794427 None:intergenic 60.0%
GGCCAACACCTGTCAACCCT+TGG + chr8_2:3794432-3794451 Msa1228300:CDS 60.0%
GCCCAAGGGTTGACAGGTGT+TGG - chr8_2:3794437-3794456 None:intergenic 60.0%
ATTGCCGCCCAAGGGTTGAC+AGG - chr8_2:3794443-3794462 None:intergenic 60.0%
GTCGCCGCCATGGATGGTAG+TGG - chr8_2:3792874-3792893 None:intergenic 65.0%
GGTTCATGTTCTCGCGGCGG+CGG + chr8_2:3793003-3793022 Msa1228300:CDS 65.0%
!! GACGGGCTGGCTGAAGCAGA+GGG - chr8_2:3794395-3794414 None:intergenic 65.0%
!! TGACGGGCTGGCTGAAGCAG+AGG - chr8_2:3794396-3794415 None:intergenic 65.0%
TCTGCTTCAGCCAGCCCGTC+AGG + chr8_2:3794395-3794414 Msa1228300:CDS 65.0%
! GATGACGGCGGAGGTTGCGG+TGG + chr8_2:3793036-3793055 Msa1228300:CDS 70.0%
CGGCGACACGCTCGCACGAA+GGG - chr8_2:3794331-3794350 None:intergenic 70.0%
ACGGCGACACGCTCGCACGA+AGG - chr8_2:3794332-3794351 None:intergenic 70.0%
!! GGGCTGGCTGAAGCAGAGGG+AGG - chr8_2:3794392-3794411 None:intergenic 70.0%
TCGGCCGTCGCCGCCATGGA+TGG - chr8_2:3792880-3792899 None:intergenic 75.0%
ATCGTCGGCCGTCGCCGCCA+TGG - chr8_2:3792884-3792903 None:intergenic 75.0%
GGCGGAGGTTGCGGTGGCGA+CGG + chr8_2:3793042-3793061 Msa1228300:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 3791830 3794853 3791830 ID=Msa1228300;Name=Msa1228300
chr8_2 mRNA 3791830 3794853 3791830 ID=Msa1228300-mRNA-1;Parent=Msa1228300;Name=Msa1228300-mRNA-1;_AED=0.06;_eAED=0.06;_QI=311|1|1|1|1|1|4|363|303
chr8_2 exon 3791830 3792309 3791830 ID=Msa1228300-mRNA-1:exon:1180;Parent=Msa1228300-mRNA-1
chr8_2 exon 3792821 3793152 3792821 ID=Msa1228300-mRNA-1:exon:1181;Parent=Msa1228300-mRNA-1
chr8_2 exon 3793436 3793515 3793436 ID=Msa1228300-mRNA-1:exon:1182;Parent=Msa1228300-mRNA-1
chr8_2 exon 3794160 3794853 3794160 ID=Msa1228300-mRNA-1:exon:1183;Parent=Msa1228300-mRNA-1
chr8_2 five_prime_UTR 3791830 3792140 3791830 ID=Msa1228300-mRNA-1:five_prime_utr;Parent=Msa1228300-mRNA-1
chr8_2 CDS 3792141 3792309 3792141 ID=Msa1228300-mRNA-1:cds;Parent=Msa1228300-mRNA-1
chr8_2 CDS 3792821 3793152 3792821 ID=Msa1228300-mRNA-1:cds;Parent=Msa1228300-mRNA-1
chr8_2 CDS 3793436 3793515 3793436 ID=Msa1228300-mRNA-1:cds;Parent=Msa1228300-mRNA-1
chr8_2 CDS 3794160 3794490 3794160 ID=Msa1228300-mRNA-1:cds;Parent=Msa1228300-mRNA-1
chr8_2 three_prime_UTR 3794491 3794853 3794491 ID=Msa1228300-mRNA-1:three_prime_utr;Parent=Msa1228300-mRNA-1
Gene Sequence

>Msa1228300

ATGGGTGAGAAAGATGATGAATTTAGTTTGGGTTTAAGCTTGAGTTTAGGATTTGGAGAATATGCAAATAACAACAACCAAACTCCTTTGAAGGTGACTCACATGCACAAGCCTCCTCAAACGGTTACAAACCAAAGGGTTTCCTTCAATAACTTGTTCCATTTTCATGATCTAAGCACAGAAACGAGGTCATTTCTCCGCGGAATAGACGGCAACACTCCACTACCATCCATGGCGGCGACGGCCGACGATGAAAACGGAGTTTCATCACCGAACAGCACCGTGTCAAGCATCAGTGGAAAGAGAAGCGAAAGAGAAGGAAACGGAGATGAAAACGACGCCGTCGAAAGGGGTTCATGTTCTCGCGGCGGCGGAAGTGATGATGATGACGGCGGAGGTTGCGGTGGCGACGGTGATTCGTCAAGGAAGAAGCTGAGGTTGTCGAAGGAACAGTCAATGTTGTTGGAAGAAACTTTCAAGGAGCATAATACTCTGAATCCGAAACAAAAGCAAGCATTGGCAAAGCAGTTGAATCTGAAGCCAAGACAAGTGGAGGTGTGGTTTCAAAACAGAAGAGCAAGGACCAAGTTGAAGCAAACTGAAGTGGATTGTGAGTACTTGAAGAGATGCTGTGAGACTCTAACTGATGAGAATAGGAGGTTGCAAAAGGAAGTGCAAGAGCTTAGGGCATTGAAGTTATCTCCACAACTCTACATGCAAATGAACCCTCCCACCACTCTTACAATGTGCCCTTCGTGCGAGCGTGTCGCCGTGTCATCTGCATCGTCCTCATCAGCAGCTGCTGCTGCTCCTCCCTCTGCTTCAGCCAGCCCGTCAGGACCAAGTGTTCAACGGCCAACACCTGTCAACCCTTGGGCGGCAATATCTATCCAAAATCGTTCCCGACCATGA
Protein sequence

>Msa1228300

MGEKDDEFSLGLSLSLGFGEYANNNNQTPLKVTHMHKPPQTVTNQRVSFNNLFHFHDLSTETRSFLRGIDGNTPLPSMAATADDENGVSSPNSTVSSISGKRSEREGNGDENDAVERGSCSRGGGSDDDDGGGCGGDGDSSRKKLRLSKEQSMLLEETFKEHNTLNPKQKQALAKQLNLKPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKEVQELRALKLSPQLYMQMNPPTTLTMCPSCERVAVSSASSSSAAAAAPPSASASPSGPSVQRPTPVNPWAAISIQNRSRP*