Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1232120 | XP_039686069.1 | 79.724 | 725 | 141 | 2 | 155 | 877 | 1 | 721 | 0.0 | 1223 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1232120 | sp|Q9SWG3|FAR1_ARATH | 43.534 | 696 | 372 | 7 | 186 | 871 | 50 | 734 | 0.0 | 634 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1232120 | A0A2K3NGL2 | 73.352 | 698 | 177 | 2 | 155 | 843 | 1 | 698 | 0.0 | 1106 |
Gene ID | Type | Classification |
---|---|---|
Msa1232120 | TF | FAR1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1232120 | MtrunA17_Chr2g0329031 | 44.818 | 685 | 353 | 7 | 185 | 852 | 12 | 688 | 0.0 | 625 |
Msa1232120 | MtrunA17_Chr1g0207551 | 48.622 | 617 | 315 | 1 | 186 | 800 | 33 | 649 | 0.0 | 619 |
Msa1232120 | MtrunA17_Chr3g0080351 | 45.997 | 637 | 300 | 5 | 186 | 803 | 75 | 686 | 0.0 | 595 |
Msa1232120 | MtrunA17_Chr5g0448761 | 38.497 | 652 | 379 | 10 | 186 | 816 | 59 | 709 | 1.36e-160 | 491 |
Msa1232120 | MtrunA17_Chr2g0296781 | 40.957 | 669 | 344 | 11 | 191 | 830 | 1 | 647 | 1.63e-157 | 481 |
Msa1232120 | MtrunA17_Chr1g0202341 | 35.330 | 651 | 395 | 8 | 170 | 797 | 25 | 672 | 4.76e-140 | 434 |
Msa1232120 | MtrunA17_Chr6g0477261 | 49.213 | 445 | 218 | 4 | 303 | 740 | 2 | 445 | 8.65e-139 | 430 |
Msa1232120 | MtrunA17_Chr2g0291581 | 36.239 | 654 | 385 | 11 | 158 | 791 | 35 | 676 | 5.13e-129 | 405 |
Msa1232120 | MtrunA17_Chr1g0196541 | 40.000 | 560 | 322 | 7 | 191 | 740 | 1 | 556 | 2.44e-128 | 405 |
Msa1232120 | MtrunA17_Chr5g0441581 | 35.059 | 676 | 396 | 12 | 179 | 834 | 18 | 670 | 1.06e-127 | 402 |
Msa1232120 | MtrunA17_Chr5g0440451 | 33.437 | 646 | 381 | 11 | 186 | 801 | 42 | 668 | 2.52e-118 | 384 |
Msa1232120 | MtrunA17_Chr5g0448511 | 37.284 | 464 | 284 | 3 | 344 | 801 | 1 | 463 | 2.75e-115 | 364 |
Msa1232120 | MtrunA17_Chr3g0118611 | 36.902 | 523 | 302 | 8 | 307 | 805 | 51 | 569 | 1.26e-109 | 356 |
Msa1232120 | MtrunA17_Chr8g0363841 | 32.692 | 624 | 399 | 10 | 179 | 782 | 9 | 631 | 2.56e-107 | 347 |
Msa1232120 | MtrunA17_Chr2g0291591 | 33.652 | 523 | 342 | 2 | 151 | 673 | 32 | 549 | 1.12e-103 | 334 |
Msa1232120 | MtrunA17_Chr2g0287061 | 34.043 | 611 | 356 | 10 | 138 | 738 | 126 | 699 | 7.65e-102 | 336 |
Msa1232120 | MtrunA17_Chr2g0324011 | 33.274 | 562 | 366 | 5 | 186 | 740 | 9 | 568 | 3.97e-100 | 326 |
Msa1232120 | MtrunA17_Chr2g0287651 | 31.552 | 580 | 375 | 10 | 189 | 755 | 77 | 647 | 1.05e-96 | 324 |
Msa1232120 | MtrunA17_Chr3g0082121 | 32.013 | 631 | 396 | 12 | 181 | 792 | 31 | 647 | 3.74e-92 | 307 |
Msa1232120 | MtrunA17_Chr1g0198761 | 31.535 | 723 | 443 | 19 | 156 | 842 | 8 | 714 | 6.68e-92 | 308 |
Msa1232120 | MtrunA17_Chr1g0203721 | 29.383 | 616 | 423 | 4 | 189 | 792 | 65 | 680 | 6.04e-87 | 298 |
Msa1232120 | MtrunA17_Chr6g0458391 | 29.412 | 561 | 369 | 4 | 187 | 740 | 225 | 765 | 3.88e-85 | 290 |
Msa1232120 | MtrunA17_Chr6g0458391 | 30.719 | 153 | 98 | 3 | 158 | 302 | 58 | 210 | 1.24e-11 | 68.9 |
Msa1232120 | MtrunA17_Chr1g0203051 | 30.473 | 571 | 365 | 13 | 176 | 727 | 64 | 621 | 2.06e-84 | 285 |
Msa1232120 | MtrunA17_Chr2g0276841 | 29.048 | 630 | 409 | 14 | 183 | 791 | 66 | 678 | 1.97e-82 | 281 |
Msa1232120 | MtrunA17_Chr2g0294841 | 26.972 | 634 | 432 | 14 | 187 | 800 | 45 | 667 | 7.94e-69 | 244 |
Msa1232120 | MtrunA17_Chr2g0290391 | 26.929 | 661 | 430 | 17 | 159 | 791 | 28 | 663 | 1.82e-68 | 242 |
Msa1232120 | MtrunA17_Chr5g0431001 | 33.638 | 437 | 259 | 10 | 180 | 592 | 52 | 481 | 1.16e-65 | 229 |
Msa1232120 | MtrunA17_Chr1g0164591 | 32.808 | 317 | 202 | 4 | 260 | 575 | 2 | 308 | 1.96e-54 | 192 |
Msa1232120 | MtrunA17_Chr7g0258861 | 33.217 | 286 | 184 | 3 | 186 | 464 | 9 | 294 | 3.38e-44 | 162 |
Msa1232120 | MtrunA17_Chr2g0308841 | 25.551 | 227 | 161 | 4 | 516 | 737 | 1 | 224 | 3.48e-23 | 100 |
Msa1232120 | MtrunA17_Chr7g0233911 | 39.823 | 113 | 62 | 2 | 185 | 292 | 32 | 143 | 7.25e-18 | 83.6 |
Msa1232120 | MtrunA17_Chr1g0149131 | 30.000 | 110 | 77 | 0 | 461 | 570 | 1 | 110 | 2.00e-15 | 73.6 |
Msa1232120 | MtrunA17_Chr3g0078041 | 32.432 | 148 | 82 | 5 | 148 | 285 | 14 | 153 | 3.61e-14 | 73.2 |
Msa1232120 | MtrunA17_Chr6g0451441 | 28.409 | 176 | 125 | 1 | 187 | 362 | 87 | 261 | 6.96e-14 | 75.5 |
Msa1232120 | MtrunA17_Chr6g0467451 | 71.111 | 45 | 13 | 0 | 112 | 156 | 1 | 45 | 7.08e-14 | 67.0 |
Msa1232120 | MtrunA17_Chr2g0326461 | 78.049 | 41 | 5 | 1 | 112 | 152 | 1 | 37 | 1.33e-13 | 67.0 |
Msa1232120 | MtrunA17_Chr2g0329361 | 30.464 | 151 | 84 | 4 | 153 | 285 | 18 | 165 | 2.53e-13 | 71.2 |
Msa1232120 | MtrunA17_Chr4g0033611 | 35.514 | 107 | 64 | 2 | 185 | 287 | 74 | 179 | 4.15e-12 | 67.4 |
Msa1232120 | MtrunA17_Chr2g0329421 | 31.298 | 131 | 78 | 3 | 185 | 304 | 25 | 154 | 4.22e-12 | 66.6 |
Msa1232120 | MtrunA17_Chr8g0340801 | 30.556 | 108 | 73 | 1 | 292 | 399 | 2 | 107 | 4.38e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1232120 | AT4G15090.1 | 43.534 | 696 | 372 | 7 | 186 | 871 | 50 | 734 | 0.0 | 634 |
Msa1232120 | AT4G15090.5 | 43.534 | 696 | 372 | 7 | 186 | 871 | 50 | 734 | 0.0 | 634 |
Msa1232120 | AT4G15090.3 | 43.534 | 696 | 372 | 7 | 186 | 871 | 50 | 734 | 0.0 | 634 |
Msa1232120 | AT4G15090.2 | 43.534 | 696 | 372 | 7 | 186 | 871 | 50 | 734 | 0.0 | 634 |
Msa1232120 | AT4G15090.4 | 43.534 | 696 | 372 | 7 | 186 | 871 | 50 | 734 | 0.0 | 634 |
Msa1232120 | AT3G22170.2 | 45.984 | 635 | 303 | 4 | 186 | 803 | 69 | 680 | 0.0 | 608 |
Msa1232120 | AT3G22170.1 | 45.984 | 635 | 303 | 4 | 186 | 803 | 69 | 680 | 0.0 | 608 |
Msa1232120 | AT1G76320.2 | 46.656 | 613 | 319 | 3 | 191 | 802 | 1 | 606 | 0.0 | 598 |
Msa1232120 | AT1G76320.1 | 46.656 | 613 | 319 | 3 | 191 | 802 | 1 | 606 | 0.0 | 598 |
Msa1232120 | AT1G76320.4 | 46.656 | 613 | 319 | 3 | 191 | 802 | 1 | 606 | 0.0 | 598 |
Msa1232120 | AT1G76320.3 | 46.656 | 613 | 319 | 3 | 191 | 802 | 1 | 606 | 0.0 | 597 |
Msa1232120 | AT4G38180.1 | 39.062 | 640 | 368 | 7 | 186 | 807 | 72 | 707 | 1.35e-163 | 499 |
Msa1232120 | AT4G19990.3 | 41.297 | 632 | 315 | 7 | 182 | 792 | 16 | 612 | 2.08e-148 | 458 |
Msa1232120 | AT4G19990.4 | 41.297 | 632 | 315 | 7 | 182 | 792 | 16 | 612 | 2.08e-148 | 458 |
Msa1232120 | AT4G19990.5 | 41.297 | 632 | 315 | 7 | 182 | 792 | 16 | 612 | 2.42e-148 | 458 |
Msa1232120 | AT4G19990.7 | 41.297 | 632 | 315 | 7 | 182 | 792 | 30 | 626 | 3.70e-148 | 458 |
Msa1232120 | AT4G19990.6 | 41.297 | 632 | 315 | 7 | 182 | 792 | 16 | 612 | 1.18e-147 | 457 |
Msa1232120 | AT4G19990.2 | 41.297 | 632 | 315 | 7 | 182 | 792 | 16 | 612 | 1.18e-147 | 457 |
Msa1232120 | AT4G19990.1 | 40.508 | 590 | 295 | 7 | 224 | 792 | 1 | 555 | 2.40e-133 | 417 |
Msa1232120 | AT1G52520.1 | 35.680 | 625 | 379 | 10 | 180 | 791 | 78 | 692 | 2.30e-123 | 391 |
Msa1232120 | AT2G27110.2 | 34.936 | 624 | 369 | 11 | 186 | 801 | 48 | 642 | 4.24e-123 | 395 |
Msa1232120 | AT2G27110.1 | 34.936 | 624 | 369 | 11 | 186 | 801 | 48 | 642 | 4.24e-123 | 395 |
Msa1232120 | AT2G32250.5 | 41.309 | 443 | 252 | 2 | 364 | 802 | 177 | 615 | 1.66e-122 | 390 |
Msa1232120 | AT2G32250.5 | 58.163 | 98 | 40 | 1 | 190 | 286 | 41 | 138 | 6.03e-28 | 121 |
Msa1232120 | AT2G32250.8 | 41.309 | 443 | 252 | 2 | 364 | 802 | 136 | 574 | 2.13e-122 | 390 |
Msa1232120 | AT2G32250.8 | 57.732 | 97 | 40 | 1 | 191 | 286 | 1 | 97 | 3.96e-27 | 119 |
Msa1232120 | AT2G32250.7 | 41.309 | 443 | 252 | 2 | 364 | 802 | 136 | 574 | 2.63e-122 | 390 |
Msa1232120 | AT2G32250.7 | 57.732 | 97 | 40 | 1 | 191 | 286 | 1 | 97 | 3.92e-27 | 119 |
Msa1232120 | AT2G32250.6 | 41.309 | 443 | 252 | 2 | 364 | 802 | 177 | 615 | 5.45e-122 | 390 |
Msa1232120 | AT2G32250.6 | 58.163 | 98 | 40 | 1 | 190 | 286 | 41 | 138 | 6.63e-28 | 121 |
Msa1232120 | AT2G32250.1 | 41.309 | 443 | 252 | 2 | 364 | 802 | 177 | 615 | 5.45e-122 | 390 |
Msa1232120 | AT2G32250.1 | 58.163 | 98 | 40 | 1 | 190 | 286 | 41 | 138 | 6.63e-28 | 121 |
Msa1232120 | AT2G32250.3 | 41.309 | 443 | 252 | 2 | 364 | 802 | 177 | 615 | 5.45e-122 | 390 |
Msa1232120 | AT2G32250.3 | 58.163 | 98 | 40 | 1 | 190 | 286 | 41 | 138 | 6.63e-28 | 121 |
Msa1232120 | AT2G32250.2 | 41.309 | 443 | 252 | 2 | 364 | 802 | 177 | 615 | 5.94e-122 | 390 |
Msa1232120 | AT2G32250.2 | 58.163 | 98 | 40 | 1 | 190 | 286 | 41 | 138 | 7.20e-28 | 121 |
Msa1232120 | AT2G32250.4 | 41.309 | 443 | 252 | 2 | 364 | 802 | 177 | 615 | 5.94e-122 | 390 |
Msa1232120 | AT2G32250.4 | 58.163 | 98 | 40 | 1 | 190 | 286 | 41 | 138 | 7.20e-28 | 121 |
Msa1232120 | AT1G80010.1 | 35.623 | 626 | 380 | 10 | 187 | 795 | 95 | 714 | 5.46e-120 | 383 |
Msa1232120 | AT2G27110.3 | 40.044 | 452 | 260 | 6 | 356 | 801 | 51 | 497 | 1.06e-112 | 363 |
Msa1232120 | AT3G06250.2 | 33.333 | 612 | 361 | 9 | 186 | 792 | 189 | 758 | 8.72e-107 | 349 |
Msa1232120 | AT3G06250.1 | 33.333 | 612 | 361 | 9 | 186 | 792 | 189 | 758 | 8.72e-107 | 349 |
Msa1232120 | AT3G06250.3 | 33.333 | 612 | 361 | 9 | 186 | 792 | 189 | 758 | 8.72e-107 | 349 |
Msa1232120 | AT5G18960.2 | 33.981 | 618 | 352 | 10 | 186 | 792 | 210 | 782 | 2.98e-102 | 337 |
Msa1232120 | AT5G18960.1 | 33.981 | 618 | 352 | 10 | 186 | 792 | 210 | 782 | 2.98e-102 | 337 |
Msa1232120 | AT4G38170.1 | 36.261 | 444 | 272 | 8 | 368 | 805 | 29 | 467 | 4.13e-92 | 303 |
Msa1232120 | AT1G10240.2 | 28.341 | 621 | 421 | 11 | 179 | 785 | 40 | 650 | 1.18e-81 | 279 |
Msa1232120 | AT1G10240.1 | 28.341 | 621 | 421 | 11 | 179 | 785 | 40 | 650 | 1.18e-81 | 279 |
Msa1232120 | AT5G28530.1 | 26.849 | 622 | 424 | 14 | 187 | 787 | 55 | 666 | 2.55e-70 | 247 |
Msa1232120 | AT5G28530.3 | 26.527 | 622 | 422 | 14 | 187 | 787 | 55 | 662 | 4.57e-70 | 246 |
Msa1232120 | AT5G28530.2 | 26.527 | 622 | 422 | 14 | 187 | 787 | 55 | 662 | 4.57e-70 | 246 |
Msa1232120 | AT5G28530.4 | 27.978 | 361 | 249 | 7 | 429 | 787 | 252 | 603 | 2.72e-38 | 152 |
Msa1232120 | AT5G28530.5 | 27.424 | 361 | 247 | 7 | 429 | 787 | 252 | 599 | 3.43e-38 | 152 |
Msa1232120 | AT3G07500.1 | 38.095 | 105 | 61 | 1 | 186 | 286 | 32 | 136 | 1.10e-14 | 74.7 |
Msa1232120 | AT3G59470.2 | 32.857 | 140 | 82 | 3 | 176 | 304 | 71 | 209 | 1.25e-14 | 75.5 |
Msa1232120 | AT3G59470.3 | 32.857 | 140 | 82 | 3 | 176 | 304 | 59 | 197 | 1.33e-14 | 75.1 |
Msa1232120 | AT3G59470.1 | 32.857 | 140 | 82 | 3 | 176 | 304 | 59 | 197 | 1.33e-14 | 75.1 |
Msa1232120 | AT4G12850.2 | 34.653 | 101 | 65 | 1 | 185 | 284 | 9 | 109 | 8.19e-13 | 67.0 |
Msa1232120 | AT4G12850.4 | 34.653 | 101 | 65 | 1 | 185 | 284 | 9 | 109 | 8.57e-13 | 67.0 |
Msa1232120 | AT2G43280.1 | 32.692 | 104 | 65 | 1 | 186 | 284 | 21 | 124 | 1.82e-12 | 67.8 |
Msa1232120 | AT4G12850.1 | 34.653 | 101 | 65 | 1 | 185 | 284 | 9 | 109 | 4.52e-12 | 66.2 |
Find 189 sgRNAs with CRISPR-Local
Find 514 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACAACAGTTTCATGATAAA+TGG | 0.147141 | 8_2:+8401674 | Msa1232120:CDS |
TTGATGGCCTTCCAATTTAT+TGG | 0.215906 | 8_2:+8402231 | Msa1232120:CDS |
GGAGGGCGCTTGAGCCCTTC+TGG | 0.221212 | 8_2:+8405199 | Msa1232120:CDS |
CATATCATATCTATCCTTAT+TGG | 0.228813 | 8_2:-8402349 | None:intergenic |
ATTCAAACTCGACTCATTTC+AGG | 0.232306 | 8_2:+8397653 | Msa1232120:CDS |
TGCCTCAAGGCGAGCGCGCC+AGG | 0.232949 | 8_2:+8405159 | Msa1232120:CDS |
GTTTACATATTTGTCGAAAA+AGG | 0.236148 | 8_2:-8401842 | None:intergenic |
CCCGCTGTGGGCTTGGGTTT+CGG | 0.239865 | 8_2:+8405058 | Msa1232120:CDS |
TTTGCCAGGGCTTCTGCCCC+TGG | 0.257698 | 8_2:+8399670 | Msa1232120:CDS |
GAGCTTGATTGATTCTTCTA+TGG | 0.262788 | 8_2:-8400970 | None:intergenic |
CAACAAAGATACCAATAAAT+TGG | 0.268093 | 8_2:-8402242 | None:intergenic |
CAGGGTCTCAGGAGCCCTTC+TGG | 0.276155 | 8_2:+8405178 | Msa1232120:CDS |
TGTCGCTTGTTTCAGTATAA+TGG | 0.280584 | 8_2:+8402189 | Msa1232120:CDS |
ATAGATGATTACAAAGAGTT+TGG | 0.303856 | 8_2:+8401277 | Msa1232120:CDS |
TTGCTTGGTTCCCAAGCAAC+AGG | 0.314204 | 8_2:+8405081 | Msa1232120:CDS |
TGGTCAGTTATTATTGCATT+TGG | 0.318296 | 8_2:-8401484 | None:intergenic |
TTTATAGCCCGCTGTGGGCT+TGG | 0.319079 | 8_2:+8405051 | Msa1232120:CDS |
CGCAAATACCCCTGTTGCTT+GGG | 0.321941 | 8_2:-8405091 | None:intergenic |
TCGAACTATGCTTGCAAAAC+GGG | 0.329330 | 8_2:+8397618 | Msa1232120:CDS |
TGAAGATATGTGTTCCAATA+AGG | 0.332681 | 8_2:+8402335 | Msa1232120:CDS |
ATCATATGTTGCTGATTTAG+AGG | 0.333126 | 8_2:+8400607 | Msa1232120:CDS |
AAGCAGTGGCAAAGTGAAAA+AGG | 0.339119 | 8_2:+8402620 | Msa1232120:CDS |
ATACATATATTAGGAACTAA+TGG | 0.341001 | 8_2:+8400532 | Msa1232120:intron |
CTTCTCAGTATATAGTTTGA+TGG | 0.344346 | 8_2:-8402267 | None:intergenic |
TTCCAATGTAAGGTTCTTCA+TGG | 0.353929 | 8_2:-8400637 | None:intergenic |
ATGCCATTTGCTCCCTTCAT+TGG | 0.359199 | 8_2:+8401346 | Msa1232120:CDS |
AAGTGAAAATGATGATTTCA+TGG | 0.362255 | 8_2:+8401615 | Msa1232120:CDS |
AATGATTGCACAATGTTTCA+AGG | 0.367492 | 8_2:-8402457 | None:intergenic |
GGCGAGCGCGCCAGGGTCTC+AGG | 0.373289 | 8_2:+8405167 | Msa1232120:CDS |
TTTGCCAGGGGCAGAAGCCC+TGG | 0.377049 | 8_2:-8399674 | None:intergenic |
TTATAGCCCGCTGTGGGCTT+GGG | 0.377082 | 8_2:+8405052 | Msa1232120:CDS |
AATGTATCTTTCATGTAAAC+AGG | 0.380087 | 8_2:-8401775 | None:intergenic |
CTACTTTCATTGCTCTGTCT+TGG | 0.380099 | 8_2:-8401504 | None:intergenic |
GGTTGATGAAAACTTGGCTT+AGG | 0.391486 | 8_2:+8401443 | Msa1232120:CDS |
CAGAAGGGCTCCTGAGACCC+TGG | 0.394288 | 8_2:-8405177 | None:intergenic |
GAGGTTTCTAGAAGCTTAGA+AGG | 0.395931 | 8_2:+8405132 | Msa1232120:CDS |
GGAAAATAATGCGCATATGC+TGG | 0.400484 | 8_2:-8400944 | None:intergenic |
TCAAATTCCATTCCAATGTA+AGG | 0.402468 | 8_2:-8400647 | None:intergenic |
CACTTTCAATCAAGATTGCT+TGG | 0.404028 | 8_2:+8401379 | Msa1232120:CDS |
TTCACTATTGACAGGCTCAT+TGG | 0.409194 | 8_2:-8400585 | None:intergenic |
TCTTTGTCGACATTCATTGA+TGG | 0.410300 | 8_2:+8402215 | Msa1232120:CDS |
TGAAAAGGCCATTCAATTGT+TGG | 0.414085 | 8_2:+8402377 | Msa1232120:CDS |
CGTCGTCTGACTTTGGAATC+AGG | 0.416108 | 8_2:+8401130 | Msa1232120:CDS |
TCACATGGTTGATGAAAACT+TGG | 0.417352 | 8_2:+8401437 | Msa1232120:CDS |
TCATGATAAATGGGAAGAAA+TGG | 0.421780 | 8_2:+8401684 | Msa1232120:CDS |
ATGAAACTGTTGTATTGAAC+GGG | 0.423384 | 8_2:-8401665 | None:intergenic |
CCTTTAGAAGTTATGTCCTT+AGG | 0.424532 | 8_2:-8399128 | None:intergenic |
TCTCACGAAACTCCGACAAC+GGG | 0.425231 | 8_2:-8397832 | None:intergenic |
GGGCTTGGGTTTCGGTTGCT+TGG | 0.425881 | 8_2:+8405066 | Msa1232120:CDS |
AGTTGCCAGGGGTTGTTACC+AGG | 0.432224 | 8_2:+8399519 | Msa1232120:intron |
TAGCTCCTGGCAAATTGCGT+GGG | 0.434244 | 8_2:-8399550 | None:intergenic |
GCCATTCAATTGTTGGAAGA+AGG | 0.440928 | 8_2:+8402384 | Msa1232120:CDS |
TCAGTTATTATTGCATTTGG+AGG | 0.442714 | 8_2:-8401481 | None:intergenic |
AAACAAGAAAACTACTTTGA+AGG | 0.443130 | 8_2:+8401861 | Msa1232120:CDS |
GACACGTCAGAAAAGTTGCC+AGG | 0.443290 | 8_2:+8399506 | Msa1232120:intron |
GTTGAAGTGATGGGACTGTC+TGG | 0.444003 | 8_2:+8402045 | Msa1232120:CDS |
TAACTTTGCATGTCAATCAA+TGG | 0.444845 | 8_2:+8402428 | Msa1232120:CDS |
ACGCAAATACCCCTGTTGCT+TGG | 0.445042 | 8_2:-8405092 | None:intergenic |
TATGCTAAATGTGTCGGATT+TGG | 0.446775 | 8_2:+8400704 | Msa1232120:CDS |
ACAACAGTTTCATGATAAAT+GGG | 0.448502 | 8_2:+8401675 | Msa1232120:CDS |
TTGGCAAATGGACGTTTGCC+AGG | 0.452152 | 8_2:-8399635 | None:intergenic |
AAAAGTAGCAGAGGAAATGT+AGG | 0.452921 | 8_2:+8402492 | Msa1232120:CDS |
CATGAAACTGTTGTATTGAA+CGG | 0.453502 | 8_2:-8401666 | None:intergenic |
ATTGCGTGGGGCCCTTTCCC+TGG | 0.457441 | 8_2:-8399537 | None:intergenic |
TTCGAACTATGCTTGCAAAA+CGG | 0.458500 | 8_2:+8397617 | Msa1232120:CDS |
GGTGATGGAGTCTTAAGAAC+AGG | 0.463539 | 8_2:-8401967 | None:intergenic |
TTCTCACGAAACTCCGACAA+CGG | 0.463999 | 8_2:-8397833 | None:intergenic |
AGGGCCCCACGCAATTTGCC+AGG | 0.464337 | 8_2:+8399545 | Msa1232120:CDS |
ATGCAGAAATCCTTGGCAAA+TGG | 0.465044 | 8_2:-8399647 | None:intergenic |
TAAGGATCGTCGTCTGACTT+TGG | 0.465904 | 8_2:+8401123 | Msa1232120:CDS |
CCTAAGGACATAACTTCTAA+AGG | 0.466423 | 8_2:+8399128 | Msa1232120:CDS |
TCCTTCTTCCAACAATTGAA+TGG | 0.466774 | 8_2:-8402385 | None:intergenic |
GAATGTGATGTTGTCGGAGT+TGG | 0.467029 | 8_2:+8397856 | Msa1232120:CDS |
CAGGGGTTGTTACCAGGGAA+AGG | 0.469999 | 8_2:+8399525 | Msa1232120:CDS |
GCCTCAAGGCGAGCGCGCCA+GGG | 0.470497 | 8_2:+8405160 | Msa1232120:CDS |
TTTGCGATGAGCAGATTTGC+TGG | 0.471552 | 8_2:+8399590 | Msa1232120:CDS |
CTTTCCCTGGTAACAACCCC+TGG | 0.471577 | 8_2:-8399524 | None:intergenic |
GAGCTTTATGATCCCGTTGT+CGG | 0.471748 | 8_2:+8397820 | Msa1232120:intron |
TTTGCTGGGTATTCTGCTCC+TGG | 0.471784 | 8_2:+8399605 | Msa1232120:CDS |
AGAGCAATGAAAGTAGCTAT+TGG | 0.471938 | 8_2:+8401511 | Msa1232120:CDS |
GCTTTGACGCCTCAGCTGCT+TGG | 0.474041 | 8_2:-8399106 | None:intergenic |
GGGCTCAAGCGCCCTCCAGA+AGG | 0.477745 | 8_2:-8405193 | None:intergenic |
CCTTGTTTGAAGGTGGAATG+TGG | 0.477763 | 8_2:+8400839 | Msa1232120:CDS |
ACACCAATGAAGGGAGCAAA+TGG | 0.478130 | 8_2:-8401349 | None:intergenic |
ATATGATATGTTATATGAAA+AGG | 0.478216 | 8_2:+8402362 | Msa1232120:CDS |
GTGATTATTCACACCAATGA+AGG | 0.478774 | 8_2:-8401359 | None:intergenic |
CCTGCCAGGGCTTTAGCTCC+TGG | 0.485581 | 8_2:-8399563 | None:intergenic |
TCATCGCAAATGAACCTGCC+AGG | 0.485862 | 8_2:-8399577 | None:intergenic |
TTAGCTCCTGGCAAATTGCG+TGG | 0.486613 | 8_2:-8399551 | None:intergenic |
CCGAAACCCAAGCCCACAGC+GGG | 0.488515 | 8_2:-8405058 | None:intergenic |
AAAATTTCAAGTTGAAGTGA+TGG | 0.489947 | 8_2:+8402035 | Msa1232120:CDS |
AAAACTTGGCTTAGGGCAAT+GGG | 0.494779 | 8_2:+8401451 | Msa1232120:CDS |
AGGGGTTGTTACCAGGGAAA+GGG | 0.496370 | 8_2:+8399526 | Msa1232120:CDS |
TCTGCTCCTGGCAAAACTCC+TGG | 0.498921 | 8_2:+8399617 | Msa1232120:CDS |
GTTGATGAAAACTTGGCTTA+GGG | 0.499855 | 8_2:+8401444 | Msa1232120:CDS |
CAAACTATATACTGAGAAGA+TGG | 0.500046 | 8_2:+8402271 | Msa1232120:CDS |
CCAGGAGCTAAAGCCCTGGC+AGG | 0.502053 | 8_2:+8399563 | Msa1232120:CDS |
AAGAAGCGTTCGTTGTAGAG+TGG | 0.502386 | 8_2:+8402136 | Msa1232120:CDS |
AATTTGCCAGGAGCAATGCC+AGG | 0.510165 | 8_2:+8397045 | None:intergenic |
CCTAAACCAGCAAACACAAA+AGG | 0.511167 | 8_2:+8402549 | Msa1232120:CDS |
AGGAGATGCAAATGCAATGT+TGG | 0.518710 | 8_2:+8401150 | Msa1232120:CDS |
GAAAACTTGGCTTAGGGCAA+TGG | 0.523349 | 8_2:+8401450 | Msa1232120:CDS |
AAATCCACGTCCTTGTTTGA+AGG | 0.523815 | 8_2:+8400829 | Msa1232120:CDS |
CTTAGAAGGGCGGTGCCTCA+AGG | 0.524262 | 8_2:+8405146 | Msa1232120:CDS |
TGGCAAAATGCAGAAATCCT+TGG | 0.526616 | 8_2:-8399654 | None:intergenic |
AGCTGAGGCGTCAAAGCCTA+AGG | 0.532413 | 8_2:+8399112 | Msa1232120:CDS |
AAAGAAATTGTGGTGACAGA+TGG | 0.532599 | 8_2:+8400879 | Msa1232120:CDS |
GTCTCAGGAGCCCTTCTGGA+GGG | 0.539143 | 8_2:+8405182 | Msa1232120:CDS |
TGATTGATTCTTCTATGGCA+AGG | 0.542980 | 8_2:-8400965 | None:intergenic |
TCCGTGTTGTTTCGCAAGTG+TGG | 0.543472 | 8_2:-8401050 | None:intergenic |
TGAGAAGAATGTGATGTTGT+CGG | 0.543771 | 8_2:+8397850 | Msa1232120:CDS |
AGTTGCTACATCAACAAAAG+TGG | 0.545982 | 8_2:+8402811 | Msa1232120:CDS |
AAATTTCAAGTTGAAGTGAT+GGG | 0.546622 | 8_2:+8402036 | Msa1232120:CDS |
AGTGAAAATGATGATTTCAT+GGG | 0.548055 | 8_2:+8401616 | Msa1232120:CDS |
ACCCTGGCGCGCTCGCCTTG+AGG | 0.548211 | 8_2:-8405161 | None:intergenic |
CTTGTTTGAAGGTGGAATGT+GGG | 0.548706 | 8_2:+8400840 | Msa1232120:CDS |
AAAATATAAAGTTGCTCTGG+AGG | 0.549502 | 8_2:+8401894 | Msa1232120:CDS |
TGAAGAACCTTACATTGGAA+TGG | 0.550850 | 8_2:+8400640 | Msa1232120:CDS |
AGAAGCGTTCGTTGTAGAGT+GGG | 0.551278 | 8_2:+8402137 | Msa1232120:CDS |
GTATGAGAAAGTTGGTTGCT+CGG | 0.554268 | 8_2:+8401075 | Msa1232120:CDS |
TTGCGATGAGCAGATTTGCT+GGG | 0.556024 | 8_2:+8399591 | Msa1232120:CDS |
AAAGTAGCAGAGGAAATGTA+GGG | 0.556137 | 8_2:+8402493 | Msa1232120:CDS |
GCAATGCCAGGGAAAACTCC+TGG | 0.556696 | 8_2:+8397057 | None:intergenic |
TCCACGTCCTTGTTTGAAGG+TGG | 0.557108 | 8_2:+8400832 | Msa1232120:CDS |
GCTCGATATGCTAAATGTGT+CGG | 0.559196 | 8_2:+8400698 | Msa1232120:CDS |
CATCGCAAATGAACCTGCCA+GGG | 0.561636 | 8_2:-8399576 | None:intergenic |
TACTGGCCTGTCTTCATCAG+TGG | 0.562298 | 8_2:-8399183 | None:intergenic |
CCACATTCCACCTTCAAACA+AGG | 0.563253 | 8_2:-8400839 | None:intergenic |
TACTCTTGAGAGCATTCTCA+AGG | 0.564394 | 8_2:-8405025 | None:intergenic |
GGCTCAAGCGCCCTCCAGAA+GGG | 0.564761 | 8_2:-8405192 | None:intergenic |
CTGGATGTCATCTTATGCAA+AGG | 0.565950 | 8_2:+8402064 | Msa1232120:CDS |
GGTCTCAGGAGCCCTTCTGG+AGG | 0.565980 | 8_2:+8405181 | Msa1232120:CDS |
TTACATATCAAAAGAAATTG+TGG | 0.567315 | 8_2:+8400869 | Msa1232120:CDS |
GCGATGGATTTGGATGATGA+TGG | 0.568217 | 8_2:+8401217 | Msa1232120:CDS |
AATGAAAGTAGCTATTGGAC+AGG | 0.569312 | 8_2:+8401516 | Msa1232120:CDS |
TGTATGAAGAACGTGAACAT+TGG | 0.569682 | 8_2:+8401749 | Msa1232120:CDS |
AAGAAATTGTGGTGACAGAT+GGG | 0.571431 | 8_2:+8400880 | Msa1232120:CDS |
AACCATGAAGAACCTTACAT+TGG | 0.573124 | 8_2:+8400635 | Msa1232120:CDS |
AAAGATACCAATAAATTGGA+AGG | 0.574883 | 8_2:-8402238 | None:intergenic |
ACATATGATTCACTATTGAC+AGG | 0.579587 | 8_2:-8400593 | None:intergenic |
AAAATACCACTGATGAAGAC+AGG | 0.581825 | 8_2:+8399177 | Msa1232120:CDS |
GTTGCCAGGGGTTGTTACCA+GGG | 0.584342 | 8_2:+8399520 | Msa1232120:intron |
TCCACCTTCAAACAAGGACG+TGG | 0.585275 | 8_2:-8400833 | None:intergenic |
GGACATAACTTCTAAAGGTG+TGG | 0.586297 | 8_2:+8399133 | Msa1232120:CDS |
TGTGATCTTTGATGAAGTCA+TGG | 0.586685 | 8_2:-8400907 | None:intergenic |
TTCATCATTGATAGTATCAG+AGG | 0.587286 | 8_2:-8402786 | None:intergenic |
TGCATGTCAATCAATGGAGG+AGG | 0.587506 | 8_2:+8402434 | Msa1232120:CDS |
CACGGAGGGTATGAGAAAGT+TGG | 0.587975 | 8_2:+8401067 | Msa1232120:CDS |
TGGCAAACGTCCATTTGCCA+AGG | 0.588359 | 8_2:+8399637 | Msa1232120:CDS |
TTGTTTGAAGGTGGAATGTG+GGG | 0.588472 | 8_2:+8400841 | Msa1232120:CDS |
ACACGTCAGAAAAGTTGCCA+GGG | 0.589039 | 8_2:+8399507 | Msa1232120:intron |
AGAGTGGGATGCATCAAAAG+TGG | 0.591450 | 8_2:+8402152 | Msa1232120:CDS |
TGCTTGGTTCCCAAGCAACA+GGG | 0.592489 | 8_2:+8405082 | Msa1232120:CDS |
GCCACACTTGCGAAACAACA+CGG | 0.593571 | 8_2:+8401049 | Msa1232120:CDS |
AGCTCCTGGCAAATTGCGTG+GGG | 0.596638 | 8_2:-8399549 | None:intergenic |
AGGTTTCTAGAAGCTTAGAA+GGG | 0.597739 | 8_2:+8405133 | Msa1232120:CDS |
TGGATGTCATCTTATGCAAA+GGG | 0.600008 | 8_2:+8402065 | Msa1232120:CDS |
ATCAAGAGTGGGATTGAGAG+AGG | 0.606990 | 8_2:+8402585 | Msa1232120:CDS |
TTTGCCAGGAGCTAAAGCCC+TGG | 0.609134 | 8_2:+8399559 | Msa1232120:CDS |
TAATATTTATAGCCCGCTGT+GGG | 0.610375 | 8_2:+8405046 | Msa1232120:CDS |
GGGCGCTTGAGCCCTTCTGG+AGG | 0.613616 | 8_2:+8405202 | Msa1232120:CDS |
TTCAGCTGTCTGATGATGAG+TGG | 0.615117 | 8_2:+8401716 | Msa1232120:CDS |
CTCCGAAAAGAATCAAGAGT+GGG | 0.620034 | 8_2:+8402574 | Msa1232120:CDS |
TGATTATTCACACCAATGAA+GGG | 0.622008 | 8_2:-8401358 | None:intergenic |
ATTGAAACTTTGCAACATGT+TGG | 0.622361 | 8_2:+8401004 | Msa1232120:CDS |
GGAAGAAGGATCATTAAGCA+AGG | 0.635799 | 8_2:+8402398 | Msa1232120:CDS |
AAGGCTCTAAGACCTCCAGA+AGG | 0.636074 | 8_2:-8405214 | None:intergenic |
CAATCGATGAAAAGTAGCAG+AGG | 0.639675 | 8_2:+8402483 | Msa1232120:CDS |
ATTTGCCAGGAGCAATGCCA+GGG | 0.642313 | 8_2:+8397046 | None:intergenic |
AAATATGCTTGCACGAGACA+TGG | 0.643012 | 8_2:+8400782 | Msa1232120:CDS |
CACTTGCGAAACAACACGGA+GGG | 0.644648 | 8_2:+8401053 | Msa1232120:CDS |
CTTTGCATGTCAATCAATGG+AGG | 0.647505 | 8_2:+8402431 | Msa1232120:CDS |
GCTTGGTTCCCAAGCAACAG+GGG | 0.647833 | 8_2:+8405083 | Msa1232120:CDS |
AGGCTCTAAGACCTCCAGAA+GGG | 0.649875 | 8_2:-8405213 | None:intergenic |
GGTCGTAAGAGAACAAGCAG+TGG | 0.651877 | 8_2:+8402606 | Msa1232120:CDS |
CGAACTATGCTTGCAAAACG+GGG | 0.653229 | 8_2:+8397619 | Msa1232120:CDS |
TTTCTAGAAGCTTAGAAGGG+CGG | 0.658185 | 8_2:+8405136 | Msa1232120:CDS |
GCTCCGAAAAGAATCAAGAG+TGG | 0.659384 | 8_2:+8402573 | Msa1232120:CDS |
ACTATGCTTGCAAAACGGGG+TGG | 0.659877 | 8_2:+8397622 | Msa1232120:CDS |
GTAATATTTATAGCCCGCTG+TGG | 0.665715 | 8_2:+8405045 | Msa1232120:CDS |
ATTACTAGCAAATGAGACCT+CGG | 0.672344 | 8_2:+8401408 | Msa1232120:CDS |
TATACTGAGAAGATGGACAA+AGG | 0.676279 | 8_2:+8402278 | Msa1232120:CDS |
ACCGAAACCCAAGCCCACAG+CGG | 0.677970 | 8_2:-8405059 | None:intergenic |
ACTTGGCTTAGGGCAATGGG+TGG | 0.687217 | 8_2:+8401454 | Msa1232120:CDS |
TGAATAGGTCCAAGCAGCTG+AGG | 0.690799 | 8_2:+8399097 | Msa1232120:intron |
CACGTCAGAAAAGTTGCCAG+GGG | 0.698037 | 8_2:+8399508 | Msa1232120:intron |
AGACCTCGGAGACTTTCACA+TGG | 0.731266 | 8_2:+8401422 | Msa1232120:CDS |
CAACCATGTGAAAGTCTCCG+AGG | 0.735828 | 8_2:-8401425 | None:intergenic |
ACACTTGCGAAACAACACGG+AGG | 0.797516 | 8_2:+8401052 | Msa1232120:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTATTTTTTATAAA+TGG | - | chr8_2:8400243-8400262 | None:intergenic | 0.0% |
!! | ATGATATTTCAAATTATTTA+TGG | + | chr8_2:8399061-8399080 | Msa1232120:intron | 10.0% |
!! | TATAACATTTATATATAGAA+GGG | - | chr8_2:8399222-8399241 | None:intergenic | 10.0% |
!! | ATATAACATTTATATATAGA+AGG | - | chr8_2:8399223-8399242 | None:intergenic | 10.0% |
!!! | TGATATTTTCAAATTATTTA+TGG | + | chr8_2:8399272-8399291 | Msa1232120:intron | 10.0% |
!!! | GTTTTTTATGTATTTTTTAT+TGG | + | chr8_2:8400116-8400135 | Msa1232120:intron | 10.0% |
!!! | TCGTATTTAATATTTTTTTT+TGG | + | chr8_2:8400477-8400496 | Msa1232120:intron | 10.0% |
!!! | TTTTACGATTTTTTTTTAAT+TGG | - | chr8_2:8404056-8404075 | None:intergenic | 10.0% |
!!! | TTTTATTAATTATCTTTTTG+TGG | + | chr8_2:8404418-8404437 | Msa1232120:intron | 10.0% |
!!! | TATACAATGTTTTTTTTTTA+GGG | - | chr8_2:8404652-8404671 | None:intergenic | 10.0% |
!!! | TGATTTTTCAATGAAATTTA+AGG | + | chr8_2:8397547-8397566 | Msa1232120:intron | 15.0% |
!! | TAAAAACTAATATCATGAAA+GGG | - | chr8_2:8398025-8398044 | None:intergenic | 15.0% |
!! | TAAATTATATACAAGTTGTA+GGG | + | chr8_2:8398274-8398293 | Msa1232120:intron | 15.0% |
!!! | TATTTTCATTACATTTCATT+TGG | - | chr8_2:8398344-8398363 | None:intergenic | 15.0% |
!! | AAATGAAATGTAATGAAAAT+AGG | + | chr8_2:8398343-8398362 | Msa1232120:intron | 15.0% |
!! | TTATATAGAATGATATATGT+TGG | + | chr8_2:8399027-8399046 | Msa1232120:intron | 15.0% |
!! | TTATATAGAATGATATATGT+TGG | + | chr8_2:8399027-8399046 | Msa1232120:intron | 15.0% |
!! | GTTGAATATTCAAATTATTA+TGG | + | chr8_2:8399306-8399325 | Msa1232120:intron | 15.0% |
!! | ACTTATAATCTCATTTAAAT+CGG | - | chr8_2:8399768-8399787 | None:intergenic | 15.0% |
!! | TAAAAAAAAAAAAAAAGAGC+CGG | - | chr8_2:8400056-8400075 | None:intergenic | 15.0% |
!!! | TTTTTTTTAGAATTCAATCA+CGG | + | chr8_2:8400067-8400086 | Msa1232120:intron | 15.0% |
!!! | ACTTCTTTTATACATATATT+AGG | + | chr8_2:8400523-8400542 | Msa1232120:intron | 15.0% |
!!! | TATTAGAAATCTTTTAGATA+AGG | + | chr8_2:8401105-8401124 | Msa1232120:CDS | 15.0% |
!! | ATATGATATGTTATATGAAA+AGG | + | chr8_2:8402362-8402381 | Msa1232120:CDS | 15.0% |
!! | AAATAATGAACAAGTATAAA+AGG | - | chr8_2:8403341-8403360 | None:intergenic | 15.0% |
!!! | ATGCTATCAATTATTTTTAA+AGG | - | chr8_2:8403382-8403401 | None:intergenic | 15.0% |
!!! | AAATGATAATTAGTTTTTGT+TGG | + | chr8_2:8403418-8403437 | Msa1232120:intron | 15.0% |
!!! | TTAATTTCTTGAATTTTGTA+TGG | - | chr8_2:8404013-8404032 | None:intergenic | 15.0% |
!!! | CTATACAATGTTTTTTTTTT+AGG | - | chr8_2:8404653-8404672 | None:intergenic | 15.0% |
!! | AACTTTATTACTATATACAT+GGG | + | chr8_2:8404894-8404913 | Msa1232120:intron | 15.0% |
!!! | TTCAATGAAATTTAAGGTTT+TGG | + | chr8_2:8397553-8397572 | Msa1232120:intron | 20.0% |
!! | GTAAAAACTAATATCATGAA+AGG | - | chr8_2:8398026-8398045 | None:intergenic | 20.0% |
!! | GTAAATTATATACAAGTTGT+AGG | + | chr8_2:8398273-8398292 | Msa1232120:intron | 20.0% |
!! | AAAAAAGTTAATGAAAAGGA+AGG | - | chr8_2:8400027-8400046 | None:intergenic | 20.0% |
!! | ACTGAAAAAAGTTAATGAAA+AGG | - | chr8_2:8400031-8400050 | None:intergenic | 20.0% |
!!! | ACAAAAGACAATTTTTTTAC+AGG | - | chr8_2:8400386-8400405 | None:intergenic | 20.0% |
!! | ATACATATATTAGGAACTAA+TGG | + | chr8_2:8400532-8400551 | Msa1232120:intron | 20.0% |
!!! | ACAATTTCTTTTGATATGTA+AGG | - | chr8_2:8400870-8400889 | None:intergenic | 20.0% |
!! | TTACATATCAAAAGAAATTG+TGG | + | chr8_2:8400869-8400888 | Msa1232120:CDS | 20.0% |
!!! | TACATGAAAGATACATTTTT+TGG | + | chr8_2:8401781-8401800 | Msa1232120:CDS | 20.0% |
!! | ATTCCAGAATTTAATGATAA+AGG | + | chr8_2:8403838-8403857 | Msa1232120:intron | 20.0% |
!! | TTACCTTTATCATTAAATTC+TGG | - | chr8_2:8403844-8403863 | None:intergenic | 20.0% |
!! | TGTATAAAATGTTAAGAAAG+AGG | + | chr8_2:8403865-8403884 | Msa1232120:intron | 20.0% |
!! | GTATAAAATGTTAAGAAAGA+GGG | + | chr8_2:8403866-8403885 | Msa1232120:intron | 20.0% |
!! | TATAAAATGTTAAGAAAGAG+GGG | + | chr8_2:8403867-8403886 | Msa1232120:intron | 20.0% |
!!! | TAATTTTAAAAACTAGTGTG+TGG | - | chr8_2:8404327-8404346 | None:intergenic | 20.0% |
!!! | TCAAAAAACAAACTTTTTTG+AGG | - | chr8_2:8404363-8404382 | None:intergenic | 20.0% |
!!! | TATTAATTATCTTTTTGTGG+TGG | + | chr8_2:8404421-8404440 | Msa1232120:intron | 20.0% |
!!! | GTTTTGAATTAGTTCTTTTT+CGG | - | chr8_2:8404594-8404613 | None:intergenic | 20.0% |
!! | AAAAAAAAACATTGTATAGC+TGG | + | chr8_2:8404654-8404673 | Msa1232120:intron | 20.0% |
!!! | TATAATTAGCATCTTATTTC+TGG | + | chr8_2:8404787-8404806 | Msa1232120:intron | 20.0% |
!!! | ATAATTAGCATCTTATTTCT+GGG | + | chr8_2:8404788-8404807 | Msa1232120:intron | 20.0% |
!! | GTAAATAATTGTCAAAATCA+TGG | + | chr8_2:8404833-8404852 | Msa1232120:intron | 20.0% |
!! | CAACTTTATTACTATATACA+TGG | + | chr8_2:8404893-8404912 | Msa1232120:intron | 20.0% |
!!! | AATGAAATTTAAGGTTTTGG+TGG | + | chr8_2:8397556-8397575 | Msa1232120:intron | 25.0% |
!!! | ATCTTCTTTTATTTCAGCTT+TGG | + | chr8_2:8397593-8397612 | Msa1232120:intron | 25.0% |
! | CTTCATAAAACACACATAAT+AGG | - | chr8_2:8397743-8397762 | None:intergenic | 25.0% |
!!! | GATATTAGTTTTTACTGTGA+TGG | + | chr8_2:8398031-8398050 | Msa1232120:intron | 25.0% |
! | TTCACTATTTATGTCATGAA+TGG | - | chr8_2:8398312-8398331 | None:intergenic | 25.0% |
!! | TTTTAGTCAAGCTTATATCA+TGG | - | chr8_2:8398648-8398667 | None:intergenic | 25.0% |
! | GATCTTAACTTTGATTGAAA+TGG | + | chr8_2:8398700-8398719 | Msa1232120:intron | 25.0% |
! | TTATTCCCCTTATTATTTGT+AGG | + | chr8_2:8398871-8398890 | Msa1232120:intron | 25.0% |
!! | TGAATAAACAGACAATTTTG+TGG | + | chr8_2:8398984-8399003 | Msa1232120:intron | 25.0% |
!! | TTAACATTTTACTCCTTATC+CGG | + | chr8_2:8399725-8399744 | Msa1232120:intron | 25.0% |
! | TATAATCTCATTTAAATCGG+AGG | - | chr8_2:8399765-8399784 | None:intergenic | 25.0% |
!! | GTGTTCTTTTGTAAATTAAC+CGG | + | chr8_2:8399786-8399805 | Msa1232120:intron | 25.0% |
!! | TTATCATAACTGCAGTTTTA+GGG | - | chr8_2:8399833-8399852 | None:intergenic | 25.0% |
!! | TTTATCATAACTGCAGTTTT+AGG | - | chr8_2:8399834-8399853 | None:intergenic | 25.0% |
!! | ATAGAGTTTTTACACTCATT+CGG | + | chr8_2:8399863-8399882 | Msa1232120:intron | 25.0% |
!!! | CATTAACTTTTTTCAGTTAC+CGG | + | chr8_2:8400034-8400053 | Msa1232120:intron | 25.0% |
! | AATCACTTTGTAAAGGAAAA+TGG | - | chr8_2:8400217-8400236 | None:intergenic | 25.0% |
! | ATTTCTCAATTATCAGAAAG+TGG | + | chr8_2:8400281-8400300 | Msa1232120:intron | 25.0% |
! | TAGATGTTTGATACTACAAA+CGG | - | chr8_2:8400433-8400452 | None:intergenic | 25.0% |
!! | TCGTCTGAAAAATGTATTTT+GGG | + | chr8_2:8401240-8401259 | Msa1232120:CDS | 25.0% |
! | ATAGATGATTACAAAGAGTT+TGG | + | chr8_2:8401277-8401296 | Msa1232120:CDS | 25.0% |
! | AAGTGAAAATGATGATTTCA+TGG | + | chr8_2:8401615-8401634 | Msa1232120:CDS | 25.0% |
! | AGTGAAAATGATGATTTCAT+GGG | + | chr8_2:8401616-8401635 | Msa1232120:CDS | 25.0% |
! | TACAACAGTTTCATGATAAA+TGG | + | chr8_2:8401674-8401693 | Msa1232120:CDS | 25.0% |
! | ACAACAGTTTCATGATAAAT+GGG | + | chr8_2:8401675-8401694 | Msa1232120:CDS | 25.0% |
! | AATGTATCTTTCATGTAAAC+AGG | - | chr8_2:8401778-8401797 | None:intergenic | 25.0% |
!!! | ATGAAAGATACATTTTTTGG+TGG | + | chr8_2:8401784-8401803 | Msa1232120:CDS | 25.0% |
! | GTTTACATATTTGTCGAAAA+AGG | - | chr8_2:8401845-8401864 | None:intergenic | 25.0% |
! | AAACAAGAAAACTACTTTGA+AGG | + | chr8_2:8401861-8401880 | Msa1232120:CDS | 25.0% |
! | TGAAAAATATAAAGTTGCTC+TGG | + | chr8_2:8401891-8401910 | Msa1232120:CDS | 25.0% |
!!! | ATTGACATTTGCTTTTCAAA+AGG | - | chr8_2:8401991-8402010 | None:intergenic | 25.0% |
!!! | TTTTGAAAAGCAAATGTCAA+TGG | + | chr8_2:8401990-8402009 | Msa1232120:CDS | 25.0% |
!!! | AAAATTTCAAGTTGAAGTGA+TGG | + | chr8_2:8402035-8402054 | Msa1232120:CDS | 25.0% |
!!! | AAATTTCAAGTTGAAGTGAT+GGG | + | chr8_2:8402036-8402055 | Msa1232120:CDS | 25.0% |
! | AAAGATACCAATAAATTGGA+AGG | - | chr8_2:8402241-8402260 | None:intergenic | 25.0% |
! | CAACAAAGATACCAATAAAT+TGG | - | chr8_2:8402245-8402264 | None:intergenic | 25.0% |
! | CATATCATATCTATCCTTAT+TGG | - | chr8_2:8402352-8402371 | None:intergenic | 25.0% |
! | AAATGAGAGAGATAATTAGT+TGG | - | chr8_2:8402894-8402913 | None:intergenic | 25.0% |
!!! | TAAGCTTATAATTGTTTTGC+AGG | + | chr8_2:8403284-8403303 | Msa1232120:intron | 25.0% |
! | GTATAGACTATATATGAGTA+TGG | + | chr8_2:8403506-8403525 | Msa1232120:intron | 25.0% |
!!! | AATGAGTGTTTTGACTTTTA+TGG | + | chr8_2:8403568-8403587 | Msa1232120:intron | 25.0% |
!!! | TCCAGAAAGCTTTATTAATT+CGG | - | chr8_2:8403713-8403732 | None:intergenic | 25.0% |
!! | TTAAACACTTGCTCTTTTAT+TGG | - | chr8_2:8403736-8403755 | None:intergenic | 25.0% |
!! | CAATTGCTTAGAATTTTCTA+CGG | + | chr8_2:8404128-8404147 | Msa1232120:intron | 25.0% |
! | ACAATGCATAAAAATATGCA+AGG | - | chr8_2:8404465-8404484 | None:intergenic | 25.0% |
!!! | TTCTTGGGAATAACATTTTT+TGG | + | chr8_2:8404759-8404778 | Msa1232120:intron | 25.0% |
! | GTTAAAAAAATGTAACTCCT+CGG | - | chr8_2:8404931-8404950 | None:intergenic | 25.0% |
TTATATAGTGATGTTTGCCA+GGG | - | chr8_2:8397125-8397144 | None:intergenic | 30.0% | |
TTTATATAGTGATGTTTGCC+AGG | - | chr8_2:8397126-8397145 | None:intergenic | 30.0% | |
TGAAGATTTAGAAGAGTTCT+GGG | - | chr8_2:8397296-8397315 | None:intergenic | 30.0% | |
ATGAAGATTTAGAAGAGTTC+TGG | - | chr8_2:8397297-8397316 | None:intergenic | 30.0% | |
AGTTCAATTGAAAAGTTCGA+CGG | - | chr8_2:8397425-8397444 | None:intergenic | 30.0% | |
AGTTAATGCAATACCTTTCT+GGG | - | chr8_2:8397491-8397510 | None:intergenic | 30.0% | |
TTCAGAAGCAAAATACAAAG+AGG | - | chr8_2:8397522-8397541 | None:intergenic | 30.0% | |
!!! | ATTAGTTTTTACTGTGATGG+AGG | + | chr8_2:8398034-8398053 | Msa1232120:intron | 30.0% |
!!! | TGCATTTTTTCAAGTGTCTT+GGG | + | chr8_2:8398092-8398111 | Msa1232120:intron | 30.0% |
ATGCATAGGAGGTTTATATT+TGG | + | chr8_2:8398123-8398142 | Msa1232120:intron | 30.0% | |
! | TTGTCTGTATGCTTTATTAC+AGG | + | chr8_2:8398393-8398412 | Msa1232120:intron | 30.0% |
AATTCTGAGTTGTGTGAATT+TGG | + | chr8_2:8398557-8398576 | Msa1232120:intron | 30.0% | |
TTATATCATGGCAGAAACAA+CGG | - | chr8_2:8398636-8398655 | None:intergenic | 30.0% | |
!! | TTCCTATGTGTCATTTATCT+AGG | + | chr8_2:8398736-8398755 | Msa1232120:intron | 30.0% |
TACCTAGATAAATGACACAT+AGG | - | chr8_2:8398741-8398760 | None:intergenic | 30.0% | |
TCCTTCCTACAAATAATAAG+GGG | - | chr8_2:8398879-8398898 | None:intergenic | 30.0% | |
CTCCTTCCTACAAATAATAA+GGG | - | chr8_2:8398880-8398899 | None:intergenic | 30.0% | |
ACTCCTTCCTACAAATAATA+AGG | - | chr8_2:8398881-8398900 | None:intergenic | 30.0% | |
AGTTTGATTGATGTTGTTGA+TGG | + | chr8_2:8398916-8398935 | Msa1232120:intron | 30.0% | |
! | GGAATATATGCTTGTTGAAT+AGG | + | chr8_2:8399082-8399101 | Msa1232120:intron | 30.0% |
! | TTGAATTGATCTCTGAAAAG+TGG | + | chr8_2:8399479-8399498 | Msa1232120:intron | 30.0% |
! | TGAATTGATCTCTGAAAAGT+GGG | + | chr8_2:8399480-8399499 | Msa1232120:intron | 30.0% |
! | TAGAGTTTTTACACTCATTC+GGG | + | chr8_2:8399864-8399883 | Msa1232120:intron | 30.0% |
ATGTATTCTTGAGAAATGCT+AGG | + | chr8_2:8399946-8399965 | Msa1232120:intron | 30.0% | |
TGTATTCTTGAGAAATGCTA+GGG | + | chr8_2:8399947-8399966 | Msa1232120:intron | 30.0% | |
TTAAACACTTGCTCTTTCAT+TGG | + | chr8_2:8399992-8400011 | Msa1232120:intron | 30.0% | |
ACTTTGTAAAGGAAAATGGT+GGG | - | chr8_2:8400213-8400232 | None:intergenic | 30.0% | |
ATGGACAAATCACTTTGTAA+AGG | - | chr8_2:8400224-8400243 | None:intergenic | 30.0% | |
ACATATGATTCACTATTGAC+AGG | - | chr8_2:8400596-8400615 | None:intergenic | 30.0% | |
!! | ATCATATGTTGCTGATTTAG+AGG | + | chr8_2:8400607-8400626 | Msa1232120:CDS | 30.0% |
TCAAATTCCATTCCAATGTA+AGG | - | chr8_2:8400650-8400669 | None:intergenic | 30.0% | |
! | GTTTAGAAATTTTCGAACGA+CGG | - | chr8_2:8400748-8400767 | None:intergenic | 30.0% |
ATTGAAACTTTGCAACATGT+TGG | + | chr8_2:8401004-8401023 | Msa1232120:CDS | 30.0% | |
! | TTCAAGATTCTTTTATGCGA+TGG | + | chr8_2:8401201-8401220 | Msa1232120:CDS | 30.0% |
!! | ATTCTTTTATGCGATGGATT+TGG | + | chr8_2:8401207-8401226 | Msa1232120:CDS | 30.0% |
! | GTCGTCTGAAAAATGTATTT+TGG | + | chr8_2:8401239-8401258 | Msa1232120:CDS | 30.0% |
!! | TCTGAAAAATGTATTTTGGG+TGG | + | chr8_2:8401243-8401262 | Msa1232120:CDS | 30.0% |
TGATTATTCACACCAATGAA+GGG | - | chr8_2:8401361-8401380 | None:intergenic | 30.0% | |
TCAGTTATTATTGCATTTGG+AGG | - | chr8_2:8401484-8401503 | None:intergenic | 30.0% | |
TGGTCAGTTATTATTGCATT+TGG | - | chr8_2:8401487-8401506 | None:intergenic | 30.0% | |
ATGAAACTGTTGTATTGAAC+GGG | - | chr8_2:8401668-8401687 | None:intergenic | 30.0% | |
CATGAAACTGTTGTATTGAA+CGG | - | chr8_2:8401669-8401688 | None:intergenic | 30.0% | |
TCATGATAAATGGGAAGAAA+TGG | + | chr8_2:8401684-8401703 | Msa1232120:CDS | 30.0% | |
AAAATATAAAGTTGCTCTGG+AGG | + | chr8_2:8401894-8401913 | Msa1232120:CDS | 30.0% | |
!! | AGCAAGCTGATTTTAATACA+TGG | + | chr8_2:8401935-8401954 | Msa1232120:CDS | 30.0% |
!! | ATTTGCTTTTCAAAAGGTGA+TGG | - | chr8_2:8401985-8402004 | None:intergenic | 30.0% |
CTTCTCAGTATATAGTTTGA+TGG | - | chr8_2:8402270-8402289 | None:intergenic | 30.0% | |
CAAACTATATACTGAGAAGA+TGG | + | chr8_2:8402271-8402290 | Msa1232120:CDS | 30.0% | |
! | CTTCATTCGTCTTTCTTTTA+TGG | - | chr8_2:8402320-8402339 | None:intergenic | 30.0% |
TGAAGATATGTGTTCCAATA+AGG | + | chr8_2:8402335-8402354 | Msa1232120:CDS | 30.0% | |
TAACTTTGCATGTCAATCAA+TGG | + | chr8_2:8402428-8402447 | Msa1232120:CDS | 30.0% | |
AATGATTGCACAATGTTTCA+AGG | - | chr8_2:8402460-8402479 | None:intergenic | 30.0% | |
!!! | TCATTGTTGTTTTTGTGATG+TGG | + | chr8_2:8402716-8402735 | Msa1232120:intron | 30.0% |
! | TTCATCATTGATAGTATCAG+AGG | - | chr8_2:8402789-8402808 | None:intergenic | 30.0% |
! | CTTTTCTCAATTTTCAGTCA+AGG | + | chr8_2:8402915-8402934 | Msa1232120:intron | 30.0% |
AGTAGAGTCATACAAGTTAA+AGG | + | chr8_2:8402939-8402958 | Msa1232120:intron | 30.0% | |
!! | TGCTGAATTTGTTGTGTAAA+AGG | + | chr8_2:8402985-8403004 | Msa1232120:intron | 30.0% |
AAGCTTACTGTTATGCTAAA+GGG | - | chr8_2:8403271-8403290 | None:intergenic | 30.0% | |
TAAGCTTACTGTTATGCTAA+AGG | - | chr8_2:8403272-8403291 | None:intergenic | 30.0% | |
TCAATTATAGTGAAAGTGAG+AGG | + | chr8_2:8403453-8403472 | Msa1232120:intron | 30.0% | |
CATATATAGTCTATACTTGC+AGG | - | chr8_2:8403502-8403521 | None:intergenic | 30.0% | |
TAGACTATATATGAGTATGG+AGG | + | chr8_2:8403509-8403528 | Msa1232120:intron | 30.0% | |
TATATGAGAAGTAGATCAAC+AGG | + | chr8_2:8403664-8403683 | Msa1232120:intron | 30.0% | |
ACCGAATTAATAAAGCTTTC+TGG | + | chr8_2:8403709-8403728 | Msa1232120:intron | 30.0% | |
TAACTAGCTAAGAATACATG+AGG | - | chr8_2:8403791-8403810 | None:intergenic | 30.0% | |
!!! | ATTCCTTTTTTGAGAACATG+CGG | - | chr8_2:8403894-8403913 | None:intergenic | 30.0% |
TAAGCTCATAGAAAAAAACG+TGG | - | chr8_2:8403924-8403943 | None:intergenic | 30.0% | |
ATAACATTTGCTTCTTGACT+TGG | + | chr8_2:8404189-8404208 | Msa1232120:intron | 30.0% | |
! | AATTATCTTTTTGTGGTGGT+CGG | + | chr8_2:8404425-8404444 | Msa1232120:intron | 30.0% |
! | GCAAACACTCTTAACTTTTA+GGG | + | chr8_2:8404708-8404727 | Msa1232120:intron | 30.0% |
! | CAAACACTCTTAACTTTTAG+GGG | + | chr8_2:8404709-8404728 | Msa1232120:intron | 30.0% |
! | AAACACTCTTAACTTTTAGG+GGG | + | chr8_2:8404710-8404729 | Msa1232120:intron | 30.0% |
! | ACGGTTGAAATTTTCATTCT+TGG | + | chr8_2:8404743-8404762 | Msa1232120:intron | 30.0% |
! | CGGTTGAAATTTTCATTCTT+GGG | + | chr8_2:8404744-8404763 | Msa1232120:intron | 30.0% |
!! | GATTTTAACAATGTTGCTCC+TGG | - | chr8_2:8397103-8397122 | None:intergenic | 35.0% |
AGCAACATTGTTAAAATCCC+TGG | + | chr8_2:8397105-8397124 | Msa1232120:intron | 35.0% | |
AATTGTGAAAGACAATGGGA+GGG | - | chr8_2:8397176-8397195 | None:intergenic | 35.0% | |
TCCCATTGTCTTTCACAATT+CGG | + | chr8_2:8397176-8397195 | Msa1232120:intron | 35.0% | |
ACCGAATTGTGAAAGACAAT+GGG | - | chr8_2:8397180-8397199 | None:intergenic | 35.0% | |
AACCGAATTGTGAAAGACAA+TGG | - | chr8_2:8397181-8397200 | None:intergenic | 35.0% | |
! | AATTGATTTCGACAGAGAGA+GGG | - | chr8_2:8397372-8397391 | None:intergenic | 35.0% |
CGAAATCAATTGAACCTCTA+AGG | + | chr8_2:8397381-8397400 | Msa1232120:intron | 35.0% | |
GTTCAATTGAAAAGTTCGAC+GGG | - | chr8_2:8397424-8397443 | None:intergenic | 35.0% | |
GAGTTAATGCAATACCTTTC+TGG | - | chr8_2:8397492-8397511 | None:intergenic | 35.0% | |
TTCGAACTATGCTTGCAAAA+CGG | + | chr8_2:8397617-8397636 | Msa1232120:CDS | 35.0% | |
ATTCAAACTCGACTCATTTC+AGG | + | chr8_2:8397653-8397672 | Msa1232120:CDS | 35.0% | |
CTCAGCAAATCACACATAAT+AGG | - | chr8_2:8397713-8397732 | None:intergenic | 35.0% | |
TGAGAAGAATGTGATGTTGT+CGG | + | chr8_2:8397850-8397869 | Msa1232120:CDS | 35.0% | |
!!! | CTGCATTTTTTCAAGTGTCT+TGG | + | chr8_2:8398091-8398110 | Msa1232120:intron | 35.0% |
! | AGAAGCACAAATAGATTTGG+GGG | - | chr8_2:8398180-8398199 | None:intergenic | 35.0% |
! | CAGAAGCACAAATAGATTTG+GGG | - | chr8_2:8398181-8398200 | None:intergenic | 35.0% |
! | CCAGAAGCACAAATAGATTT+GGG | - | chr8_2:8398182-8398201 | None:intergenic | 35.0% |
! | ACCAGAAGCACAAATAGATT+TGG | - | chr8_2:8398183-8398202 | None:intergenic | 35.0% |
! | AGATACGACACTATGAGTTT+TGG | + | chr8_2:8398228-8398247 | Msa1232120:intron | 35.0% |
ATTACAGGCCTGATATAGTT+TGG | + | chr8_2:8398408-8398427 | Msa1232120:intron | 35.0% | |
CAACATAGCCAAACTATATC+AGG | - | chr8_2:8398419-8398438 | None:intergenic | 35.0% | |
TTGTAACATCATCAGACAAC+AGG | + | chr8_2:8398436-8398455 | Msa1232120:intron | 35.0% | |
ATTCACACAACTCAGAATTC+TGG | - | chr8_2:8398556-8398575 | None:intergenic | 35.0% | |
! | TGATTCTTGTTTCTTGATGC+TGG | + | chr8_2:8398584-8398603 | Msa1232120:intron | 35.0% |
AAAGATTGAGATGTACTTGC+TGG | + | chr8_2:8398788-8398807 | Msa1232120:intron | 35.0% | |
! | TATGTTGATTGTACCACTGA+TGG | + | chr8_2:8398816-8398835 | Msa1232120:intron | 35.0% |
ACAGTTAAGAATTCCATCAG+TGG | - | chr8_2:8398832-8398851 | None:intergenic | 35.0% | |
ACTGATGGAATTCTTAACTG+TGG | + | chr8_2:8398831-8398850 | Msa1232120:intron | 35.0% | |
TCCCCTTATTATTTGTAGGA+AGG | + | chr8_2:8398875-8398894 | Msa1232120:intron | 35.0% | |
TTTGTAGGAAGGAGTTATCT+TGG | + | chr8_2:8398886-8398905 | Msa1232120:intron | 35.0% | |
ATGGTCTATTTACTCAACTC+AGG | + | chr8_2:8398935-8398954 | Msa1232120:intron | 35.0% | |
TTTACTCAACTCAGGATACT+TGG | + | chr8_2:8398943-8398962 | Msa1232120:intron | 35.0% | |
! | CCTTTAGAAGTTATGTCCTT+AGG | - | chr8_2:8399131-8399150 | None:intergenic | 35.0% |
CCTAAGGACATAACTTCTAA+AGG | + | chr8_2:8399128-8399147 | Msa1232120:CDS | 35.0% | |
!!! | ATCAGTGGTATTTTGAGACT+CGG | - | chr8_2:8399171-8399190 | None:intergenic | 35.0% |
AAAATACCACTGATGAAGAC+AGG | + | chr8_2:8399177-8399196 | Msa1232120:CDS | 35.0% | |
AGGGATATGATTCTACTTAC+TGG | - | chr8_2:8399203-8399222 | None:intergenic | 35.0% | |
! | AAATTCGTACGCATTTTGTC+AGG | + | chr8_2:8399425-8399444 | Msa1232120:intron | 35.0% |
! | AATTCGTACGCATTTTGTCA+GGG | + | chr8_2:8399426-8399445 | Msa1232120:intron | 35.0% |
! | AGAAATGTTGCATTTTGCCA+GGG | - | chr8_2:8399690-8399709 | None:intergenic | 35.0% |
! | AAGAAATGTTGCATTTTGCC+AGG | - | chr8_2:8399691-8399710 | None:intergenic | 35.0% |
CTTGAGTTTAAATCCGGATA+AGG | - | chr8_2:8399741-8399760 | None:intergenic | 35.0% | |
GAATTTGAACTCAAAAGCTC+CGG | - | chr8_2:8399808-8399827 | None:intergenic | 35.0% | |
AGTTAATGAAAAGGAAGGTG+AGG | - | chr8_2:8400022-8400041 | None:intergenic | 35.0% | |
! | TATTGGAACCTCAAACGTTT+TGG | + | chr8_2:8400133-8400152 | Msa1232120:intron | 35.0% |
CACTTTGTAAAGGAAAATGG+TGG | - | chr8_2:8400214-8400233 | None:intergenic | 35.0% | |
!!! | CGTCATTCGTCATTTTTGTA+AGG | + | chr8_2:8400351-8400370 | Msa1232120:intron | 35.0% |
AACGGTCATATACTACACAT+AGG | - | chr8_2:8400415-8400434 | None:intergenic | 35.0% | |
! | CACTCTTCATTTTCATCGAT+AGG | - | chr8_2:8400560-8400579 | None:intergenic | 35.0% |
AACCATGAAGAACCTTACAT+TGG | + | chr8_2:8400635-8400654 | Msa1232120:CDS | 35.0% | |
TTCCAATGTAAGGTTCTTCA+TGG | - | chr8_2:8400640-8400659 | None:intergenic | 35.0% | |
TGAAGAACCTTACATTGGAA+TGG | + | chr8_2:8400640-8400659 | Msa1232120:CDS | 35.0% | |
TATGCTAAATGTGTCGGATT+TGG | + | chr8_2:8400704-8400723 | Msa1232120:CDS | 35.0% | |
TGGTAAAAAACGAGAATCGA+CGG | + | chr8_2:8400802-8400821 | Msa1232120:CDS | 35.0% | |
AAAGAAATTGTGGTGACAGA+TGG | + | chr8_2:8400879-8400898 | Msa1232120:CDS | 35.0% | |
AAGAAATTGTGGTGACAGAT+GGG | + | chr8_2:8400880-8400899 | Msa1232120:CDS | 35.0% | |
TGTGATCTTTGATGAAGTCA+TGG | - | chr8_2:8400910-8400929 | None:intergenic | 35.0% | |
! | TGATTGATTCTTCTATGGCA+AGG | - | chr8_2:8400968-8400987 | None:intergenic | 35.0% |
! | GAGCTTGATTGATTCTTCTA+TGG | - | chr8_2:8400973-8400992 | None:intergenic | 35.0% |
! | AGTGTGGCAAAAATTTTGCT+TGG | - | chr8_2:8401037-8401056 | None:intergenic | 35.0% |
GTGATTATTCACACCAATGA+AGG | - | chr8_2:8401362-8401381 | None:intergenic | 35.0% | |
CACTTTCAATCAAGATTGCT+TGG | + | chr8_2:8401379-8401398 | Msa1232120:CDS | 35.0% | |
ATTACTAGCAAATGAGACCT+CGG | + | chr8_2:8401408-8401427 | Msa1232120:CDS | 35.0% | |
!! | TCACATGGTTGATGAAAACT+TGG | + | chr8_2:8401437-8401456 | Msa1232120:CDS | 35.0% |
! | GTTGATGAAAACTTGGCTTA+GGG | + | chr8_2:8401444-8401463 | Msa1232120:CDS | 35.0% |
AGAGCAATGAAAGTAGCTAT+TGG | + | chr8_2:8401511-8401530 | Msa1232120:CDS | 35.0% | |
AATGAAAGTAGCTATTGGAC+AGG | + | chr8_2:8401516-8401535 | Msa1232120:CDS | 35.0% | |
!! | AGAAAAGTGCCTGAAAAACT+CGG | + | chr8_2:8401583-8401602 | Msa1232120:CDS | 35.0% |
! | ATAACATGACCGAGTTTTTC+AGG | - | chr8_2:8401595-8401614 | None:intergenic | 35.0% |
TGTATGAAGAACGTGAACAT+TGG | + | chr8_2:8401749-8401768 | Msa1232120:CDS | 35.0% | |
TGGATGTCATCTTATGCAAA+GGG | + | chr8_2:8402065-8402084 | Msa1232120:CDS | 35.0% | |
! | TGTCGCTTGTTTCAGTATAA+TGG | + | chr8_2:8402189-8402208 | Msa1232120:CDS | 35.0% |
TCTTTGTCGACATTCATTGA+TGG | + | chr8_2:8402215-8402234 | Msa1232120:CDS | 35.0% | |
! | TTGATGGCCTTCCAATTTAT+TGG | + | chr8_2:8402231-8402250 | Msa1232120:CDS | 35.0% |
TATACTGAGAAGATGGACAA+AGG | + | chr8_2:8402278-8402297 | Msa1232120:CDS | 35.0% | |
TGAAAAGGCCATTCAATTGT+TGG | + | chr8_2:8402377-8402396 | Msa1232120:CDS | 35.0% | |
TCCTTCTTCCAACAATTGAA+TGG | - | chr8_2:8402388-8402407 | None:intergenic | 35.0% | |
AAAAGTAGCAGAGGAAATGT+AGG | + | chr8_2:8402492-8402511 | Msa1232120:CDS | 35.0% | |
AAAGTAGCAGAGGAAATGTA+GGG | + | chr8_2:8402493-8402512 | Msa1232120:CDS | 35.0% | |
! | ATCCCACTCTTGATTCTTTT+CGG | - | chr8_2:8402579-8402598 | None:intergenic | 35.0% |
AGTTGCTACATCAACAAAAG+TGG | + | chr8_2:8402811-8402830 | Msa1232120:CDS | 35.0% | |
GTCATACAAGTTAAAGGACA+TGG | + | chr8_2:8402945-8402964 | Msa1232120:intron | 35.0% | |
TTCCATTTGCTTCAAGTGTA+TGG | + | chr8_2:8403189-8403208 | Msa1232120:intron | 35.0% | |
CTATATATGAGTATGGAGGA+TGG | + | chr8_2:8403513-8403532 | Msa1232120:intron | 35.0% | |
AGAATACATGAGGAATGCTA+GGG | - | chr8_2:8403781-8403800 | None:intergenic | 35.0% | |
AAGAATACATGAGGAATGCT+AGG | - | chr8_2:8403782-8403801 | None:intergenic | 35.0% | |
GCATGTTCTCAAAAAAGGAA+TGG | + | chr8_2:8403893-8403912 | Msa1232120:intron | 35.0% | |
ATTCTAAGCAATTGAGTCGT+TGG | - | chr8_2:8404122-8404141 | None:intergenic | 35.0% | |
! | TATGTTACTTACACCGCAAT+TGG | + | chr8_2:8404276-8404295 | Msa1232120:intron | 35.0% |
! | ATTATCTTTTTGTGGTGGTC+GGG | + | chr8_2:8404426-8404445 | Msa1232120:intron | 35.0% |
ATAAAAATATGCAAGGTCCG+GGG | - | chr8_2:8404458-8404477 | None:intergenic | 35.0% | |
CATAAAAATATGCAAGGTCC+GGG | - | chr8_2:8404459-8404478 | None:intergenic | 35.0% | |
GCATAAAAATATGCAAGGTC+CGG | - | chr8_2:8404460-8404479 | None:intergenic | 35.0% | |
GATAATTGTCTTCGTGAACT+TGG | - | chr8_2:8404502-8404521 | None:intergenic | 35.0% | |
! | GGCAAACACTCTTAACTTTT+AGG | + | chr8_2:8404707-8404726 | Msa1232120:intron | 35.0% |
AACTGTACTTGCAAAAAGCA+CGG | + | chr8_2:8404948-8404967 | Msa1232120:intron | 35.0% | |
TAATATTTATAGCCCGCTGT+GGG | + | chr8_2:8405046-8405065 | Msa1232120:CDS | 35.0% | |
! | AGGTTTCTAGAAGCTTAGAA+GGG | + | chr8_2:8405133-8405152 | Msa1232120:CDS | 35.0% |
GAGAGAGAGAAAAGAGGAAA+AGG | - | chr8_2:8397152-8397171 | None:intergenic | 40.0% | |
GAATTGTGAAAGACAATGGG+AGG | - | chr8_2:8397177-8397196 | None:intergenic | 40.0% | |
! | TTTTGTGGTTCGATGGAGTT+TGG | - | chr8_2:8397231-8397250 | None:intergenic | 40.0% |
TGTTGTGAGTGAGAGTTTGA+CGG | - | chr8_2:8397344-8397363 | None:intergenic | 40.0% | |
! | CAATTGATTTCGACAGAGAG+AGG | - | chr8_2:8397373-8397392 | None:intergenic | 40.0% |
TGAAAAGTTCGACGGGTATT+GGG | - | chr8_2:8397417-8397436 | None:intergenic | 40.0% | |
TTGAAAAGTTCGACGGGTAT+TGG | - | chr8_2:8397418-8397437 | None:intergenic | 40.0% | |
CTGGGTTCATTCGAATCTTA+GGG | - | chr8_2:8397473-8397492 | None:intergenic | 40.0% | |
TCTGGGTTCATTCGAATCTT+AGG | - | chr8_2:8397474-8397493 | None:intergenic | 40.0% | |
AGATTCGAATGAACCCAGAA+AGG | + | chr8_2:8397475-8397494 | Msa1232120:intron | 40.0% | |
TCGAACTATGCTTGCAAAAC+GGG | + | chr8_2:8397618-8397637 | Msa1232120:CDS | 40.0% | |
CACTTGAAAAAATGCAGCAG+AGG | - | chr8_2:8398088-8398107 | None:intergenic | 40.0% | |
CTTGGGTGTTTAGTATGCAT+AGG | + | chr8_2:8398109-8398128 | Msa1232120:intron | 40.0% | |
AAGCACAAATAGATTTGGGG+GGG | - | chr8_2:8398178-8398197 | None:intergenic | 40.0% | |
GAAGCACAAATAGATTTGGG+GGG | - | chr8_2:8398179-8398198 | None:intergenic | 40.0% | |
CCCAAATCTATTTGTGCTTC+TGG | + | chr8_2:8398179-8398198 | Msa1232120:intron | 40.0% | |
AATAGGTGAACTGACTGCAA+TGG | + | chr8_2:8398360-8398379 | Msa1232120:intron | 40.0% | |
AACTGACTGCAATGGTTCTT+TGG | + | chr8_2:8398368-8398387 | Msa1232120:intron | 40.0% | |
! | ACAGACAATTTTGTGGTCTC+AGG | + | chr8_2:8398991-8399010 | Msa1232120:intron | 40.0% |
! | GGACATAACTTCTAAAGGTG+TGG | + | chr8_2:8399133-8399152 | Msa1232120:CDS | 40.0% |
! | ATTCGTACGCATTTTGTCAG+GGG | + | chr8_2:8399427-8399446 | Msa1232120:intron | 40.0% |
ATCAATTCAAACGTTGCCAG+GGG | - | chr8_2:8399469-8399488 | None:intergenic | 40.0% | |
GATCAATTCAAACGTTGCCA+GGG | - | chr8_2:8399470-8399489 | None:intergenic | 40.0% | |
AGATCAATTCAAACGTTGCC+AGG | - | chr8_2:8399471-8399490 | None:intergenic | 40.0% | |
ATGCAGAAATCCTTGGCAAA+TGG | - | chr8_2:8399650-8399669 | None:intergenic | 40.0% | |
TGGCAAAATGCAGAAATCCT+TGG | - | chr8_2:8399657-8399676 | None:intergenic | 40.0% | |
! | AAGGATTTCTGCATTTTGCC+AGG | + | chr8_2:8399656-8399675 | Msa1232120:CDS | 40.0% |
! | AGGATTTCTGCATTTTGCCA+GGG | + | chr8_2:8399657-8399676 | Msa1232120:CDS | 40.0% |
! | GAAATGTTGCATTTTGCCAG+GGG | - | chr8_2:8399689-8399708 | None:intergenic | 40.0% |
GGAGGACTTGAGTTTAAATC+CGG | - | chr8_2:8399747-8399766 | None:intergenic | 40.0% | |
ACTCATTCGGGTCATACAAA+AGG | + | chr8_2:8399876-8399895 | Msa1232120:intron | 40.0% | |
AGCGAAAGAAATTATCCCGA+CGG | + | chr8_2:8399913-8399932 | Msa1232120:intron | 40.0% | |
ATACATAGTCGTGAAACCGT+CGG | - | chr8_2:8399932-8399951 | None:intergenic | 40.0% | |
TAATGAAAAGGAAGGTGAGG+TGG | - | chr8_2:8400019-8400038 | None:intergenic | 40.0% | |
TACTTAGCGCCAATTTAGCT+AGG | - | chr8_2:8400161-8400180 | None:intergenic | 40.0% | |
GGTCATATACTACACATAGG+AGG | - | chr8_2:8400412-8400431 | None:intergenic | 40.0% | |
TTCACTATTGACAGGCTCAT+TGG | - | chr8_2:8400588-8400607 | None:intergenic | 40.0% | |
GCTCGATATGCTAAATGTGT+CGG | + | chr8_2:8400698-8400717 | Msa1232120:CDS | 40.0% | |
AAATATGCTTGCACGAGACA+TGG | + | chr8_2:8400782-8400801 | Msa1232120:CDS | 40.0% | |
! | AAATCCACGTCCTTGTTTGA+AGG | + | chr8_2:8400829-8400848 | Msa1232120:CDS | 40.0% |
CTTGTTTGAAGGTGGAATGT+GGG | + | chr8_2:8400840-8400859 | Msa1232120:CDS | 40.0% | |
TTGTTTGAAGGTGGAATGTG+GGG | + | chr8_2:8400841-8400860 | Msa1232120:CDS | 40.0% | |
GGAAAATAATGCGCATATGC+TGG | - | chr8_2:8400947-8400966 | None:intergenic | 40.0% | |
! | GTATGAGAAAGTTGGTTGCT+CGG | + | chr8_2:8401075-8401094 | Msa1232120:CDS | 40.0% |
AGGAGATGCAAATGCAATGT+TGG | + | chr8_2:8401150-8401169 | Msa1232120:CDS | 40.0% | |
!! | GTATTTTGGGTGGATGCAAA+TGG | + | chr8_2:8401253-8401272 | Msa1232120:CDS | 40.0% |
!! | GGTTGATGAAAACTTGGCTT+AGG | + | chr8_2:8401443-8401462 | Msa1232120:CDS | 40.0% |
AAAACTTGGCTTAGGGCAAT+GGG | + | chr8_2:8401451-8401470 | Msa1232120:CDS | 40.0% | |
CTACTTTCATTGCTCTGTCT+TGG | - | chr8_2:8401507-8401526 | None:intergenic | 40.0% | |
CAAAAACGATGTCGAGCATT+TGG | - | chr8_2:8401547-8401566 | None:intergenic | 40.0% | |
!! | CTCGACATCGTTTTTGTCTT+TGG | + | chr8_2:8401551-8401570 | Msa1232120:CDS | 40.0% |
CTGGATGTCATCTTATGCAA+AGG | + | chr8_2:8402064-8402083 | Msa1232120:CDS | 40.0% | |
GCCATTCAATTGTTGGAAGA+AGG | + | chr8_2:8402384-8402403 | Msa1232120:CDS | 40.0% | |
GGAAGAAGGATCATTAAGCA+AGG | + | chr8_2:8402398-8402417 | Msa1232120:CDS | 40.0% | |
CTTTGCATGTCAATCAATGG+AGG | + | chr8_2:8402431-8402450 | Msa1232120:CDS | 40.0% | |
CAATCGATGAAAAGTAGCAG+AGG | + | chr8_2:8402483-8402502 | Msa1232120:CDS | 40.0% | |
!!! | CCTTTTGTGTTTGCTGGTTT+AGG | - | chr8_2:8402552-8402571 | None:intergenic | 40.0% |
CCTAAACCAGCAAACACAAA+AGG | + | chr8_2:8402549-8402568 | Msa1232120:CDS | 40.0% | |
CTCCGAAAAGAATCAAGAGT+GGG | + | chr8_2:8402574-8402593 | Msa1232120:CDS | 40.0% | |
AAGCAGTGGCAAAGTGAAAA+AGG | + | chr8_2:8402620-8402639 | Msa1232120:CDS | 40.0% | |
TGCCATACACTTGAAGCAAA+TGG | - | chr8_2:8403194-8403213 | None:intergenic | 40.0% | |
!! | TGTTTTGCAGGATTTGCTTC+AGG | + | chr8_2:8403296-8403315 | Msa1232120:intron | 40.0% |
ATATGAGTATGGAGGATGGT+AGG | + | chr8_2:8403517-8403536 | Msa1232120:intron | 40.0% | |
ATGGAAATGCTAGCGTGTTT+CGG | + | chr8_2:8403587-8403606 | Msa1232120:intron | 40.0% | |
TGGAATTCATGCAAAACAGC+CGG | - | chr8_2:8403824-8403843 | None:intergenic | 40.0% | |
TTCGTGAAACTATCGTGAGT+TGG | + | chr8_2:8403963-8403982 | Msa1232120:intron | 40.0% | |
TTACGTTGAATCGCCAATTG+CGG | - | chr8_2:8404292-8404311 | None:intergenic | 40.0% | |
ATTGGCGATTCAACGTAACT+CGG | + | chr8_2:8404294-8404313 | Msa1232120:intron | 40.0% | |
! | TGAACTTGGCTCAGTTGATA+TGG | - | chr8_2:8404488-8404507 | None:intergenic | 40.0% |
!!! | TTTAGGGGGCGTTTGTTTTA+CGG | + | chr8_2:8404724-8404743 | Msa1232120:intron | 40.0% |
! | CATGGGAACTTTTTATTCCG+AGG | + | chr8_2:8404911-8404930 | Msa1232120:intron | 40.0% |
! | TACTTGCAAAAAGCACGGTA+AGG | + | chr8_2:8404953-8404972 | Msa1232120:intron | 40.0% |
! | AAAAGCACGGTAAGGATTCT+AGG | + | chr8_2:8404961-8404980 | Msa1232120:intron | 40.0% |
AAAGCACGGTAAGGATTCTA+GGG | + | chr8_2:8404962-8404981 | Msa1232120:intron | 40.0% | |
!! | TACTCTTGAGAGCATTCTCA+AGG | - | chr8_2:8405028-8405047 | None:intergenic | 40.0% |
GTAATATTTATAGCCCGCTG+TGG | + | chr8_2:8405045-8405064 | Msa1232120:CDS | 40.0% | |
!!! | CAGGGGTATTTGCGTATTTT+TGG | + | chr8_2:8405100-8405119 | Msa1232120:CDS | 40.0% |
!!! | GGGTATTTGCGTATTTTTGG+CGG | + | chr8_2:8405103-8405122 | Msa1232120:CDS | 40.0% |
!!! | GTATTTTTGGCGGTTTCTAG+AGG | + | chr8_2:8405113-8405132 | Msa1232120:CDS | 40.0% |
! | GAGGTTTCTAGAAGCTTAGA+AGG | + | chr8_2:8405132-8405151 | Msa1232120:CDS | 40.0% |
! | TTTCTAGAAGCTTAGAAGGG+CGG | + | chr8_2:8405136-8405155 | Msa1232120:CDS | 40.0% |
GATGCAAAAGGTGGTTTACC+AGG | - | chr8_2:8397078-8397097 | None:intergenic | 45.0% | |
!! | AGAAGGGTTTTGTGGTTCGA+TGG | - | chr8_2:8397238-8397257 | None:intergenic | 45.0% |
! | GGGTTCTACAGAGTTGGTTA+GGG | - | chr8_2:8397276-8397295 | None:intergenic | 45.0% |
! | TGGGTTCTACAGAGTTGGTT+AGG | - | chr8_2:8397277-8397296 | None:intergenic | 45.0% |
!! | AGTTCTGGGTTCTACAGAGT+TGG | - | chr8_2:8397282-8397301 | None:intergenic | 45.0% |
GTTGTGAGTGAGAGTTTGAC+GGG | - | chr8_2:8397343-8397362 | None:intergenic | 45.0% | |
TGGGTTCAATCGAACCTTAG+AGG | - | chr8_2:8397398-8397417 | None:intergenic | 45.0% | |
CGAACTATGCTTGCAAAACG+GGG | + | chr8_2:8397619-8397638 | Msa1232120:CDS | 45.0% | |
!!! | TGCAAAACGGGGTGGTTTTT+TGG | + | chr8_2:8397630-8397649 | Msa1232120:CDS | 45.0% |
! | GAGCTTTATGATCCCGTTGT+CGG | + | chr8_2:8397820-8397839 | Msa1232120:intron | 45.0% |
TTCTCACGAAACTCCGACAA+CGG | - | chr8_2:8397836-8397855 | None:intergenic | 45.0% | |
GAATGTGATGTTGTCGGAGT+TGG | + | chr8_2:8397856-8397875 | Msa1232120:CDS | 45.0% | |
CGTGAGAAGAATGTGATGTG+AGG | + | chr8_2:8397884-8397903 | Msa1232120:intron | 45.0% | |
GAGAAGAATGTGATGTGAGG+TGG | + | chr8_2:8397887-8397906 | Msa1232120:intron | 45.0% | |
GGGTGTTTAGTATGCATAGG+AGG | + | chr8_2:8398112-8398131 | Msa1232120:intron | 45.0% | |
AAATAGATTTGGGGGGGTTG+GGG | - | chr8_2:8398172-8398191 | None:intergenic | 45.0% | |
CAAATAGATTTGGGGGGGTT+GGG | - | chr8_2:8398173-8398192 | None:intergenic | 45.0% | |
ACAAATAGATTTGGGGGGGT+TGG | - | chr8_2:8398174-8398193 | None:intergenic | 45.0% | |
!!! | AGTGGTATTTTGAGACTCGG+TGG | - | chr8_2:8399168-8399187 | None:intergenic | 45.0% |
ACACGTCAGAAAAGTTGCCA+GGG | + | chr8_2:8399507-8399526 | Msa1232120:intron | 45.0% | |
TTTGCGATGAGCAGATTTGC+TGG | + | chr8_2:8399590-8399609 | Msa1232120:CDS | 45.0% | |
! | TTGCGATGAGCAGATTTGCT+GGG | + | chr8_2:8399591-8399610 | Msa1232120:CDS | 45.0% |
TACATAGTCGTGAAACCGTC+GGG | - | chr8_2:8399931-8399950 | None:intergenic | 45.0% | |
!! | GTTTTGGCGCCTAGCTAAAT+TGG | + | chr8_2:8400149-8400168 | Msa1232120:intron | 45.0% |
CCACATTCCACCTTCAAACA+AGG | - | chr8_2:8400842-8400861 | None:intergenic | 45.0% | |
! | CCTTGTTTGAAGGTGGAATG+TGG | + | chr8_2:8400839-8400858 | Msa1232120:CDS | 45.0% |
TAAGGATCGTCGTCTGACTT+TGG | + | chr8_2:8401123-8401142 | Msa1232120:CDS | 45.0% | |
! | GCGATGGATTTGGATGATGA+TGG | + | chr8_2:8401217-8401236 | Msa1232120:CDS | 45.0% |
! | ATGCCATTTGCTCCCTTCAT+TGG | + | chr8_2:8401346-8401365 | Msa1232120:CDS | 45.0% |
ACACCAATGAAGGGAGCAAA+TGG | - | chr8_2:8401352-8401371 | None:intergenic | 45.0% | |
GAAAACTTGGCTTAGGGCAA+TGG | + | chr8_2:8401450-8401469 | Msa1232120:CDS | 45.0% | |
! | TTCAGCTGTCTGATGATGAG+TGG | + | chr8_2:8401716-8401735 | Msa1232120:CDS | 45.0% |
!! | GGTGATGGAGTCTTAAGAAC+AGG | - | chr8_2:8401970-8401989 | None:intergenic | 45.0% |
!! | AAGAAGCGTTCGTTGTAGAG+TGG | + | chr8_2:8402136-8402155 | Msa1232120:CDS | 45.0% |
!! | AGAAGCGTTCGTTGTAGAGT+GGG | + | chr8_2:8402137-8402156 | Msa1232120:CDS | 45.0% |
AGAGTGGGATGCATCAAAAG+TGG | + | chr8_2:8402152-8402171 | Msa1232120:CDS | 45.0% | |
TGCATGTCAATCAATGGAGG+AGG | + | chr8_2:8402434-8402453 | Msa1232120:CDS | 45.0% | |
GCTCCGAAAAGAATCAAGAG+TGG | + | chr8_2:8402573-8402592 | Msa1232120:CDS | 45.0% | |
ATCAAGAGTGGGATTGAGAG+AGG | + | chr8_2:8402585-8402604 | Msa1232120:CDS | 45.0% | |
GCTTCAAGTGTATGGCAGTA+TGG | + | chr8_2:8403197-8403216 | Msa1232120:intron | 45.0% | |
AGTAGATCAACAGGTACAGC+AGG | + | chr8_2:8403673-8403692 | Msa1232120:intron | 45.0% | |
GGAATTCATGCAAAACAGCC+GGG | - | chr8_2:8403823-8403842 | None:intergenic | 45.0% | |
GGTCCGCATGTTCTCAAAAA+AGG | + | chr8_2:8403888-8403907 | Msa1232120:intron | 45.0% | |
GATAGTTTCACGAAGCAACG+TGG | - | chr8_2:8403957-8403976 | None:intergenic | 45.0% | |
ATGCTAAGTGGATGTGGACT+AGG | + | chr8_2:8404685-8404704 | Msa1232120:intron | 45.0% | |
! | TGCTAAGTGGATGTGGACTA+GGG | + | chr8_2:8404686-8404705 | Msa1232120:intron | 45.0% |
AGGGTTCAGAATCGTATGCT+AGG | + | chr8_2:8404981-8405000 | Msa1232120:intron | 45.0% | |
GGGTTCAGAATCGTATGCTA+GGG | + | chr8_2:8404982-8405001 | Msa1232120:intron | 45.0% | |
!! | TAAAAAATAAAAAAAATCAT+TGG | + | chr8_2:8400247-8400266 | Msa1232120:intron | 5.0% |
!! | NNNNNNNNNNTTATCAAATT+AGG | - | chr8_2:8403019-8403038 | None:intergenic | 5.0% |
! | GGTTTACCAGGAGTTTTCCC+TGG | - | chr8_2:8397066-8397085 | None:intergenic | 50.0% |
! | AACCACCTTTTGCATCTGCC+AGG | + | chr8_2:8397082-8397101 | Msa1232120:intron | 50.0% |
TTGCTCCTGGCAGATGCAAA+AGG | - | chr8_2:8397090-8397109 | None:intergenic | 50.0% | |
GAGGGAGAGAGAGAGAAAAG+AGG | - | chr8_2:8397158-8397177 | None:intergenic | 50.0% | |
! | TGGAGTTTGGTGAGAGACGA+GGG | - | chr8_2:8397218-8397237 | None:intergenic | 50.0% |
! | ATGGAGTTTGGTGAGAGACG+AGG | - | chr8_2:8397219-8397238 | None:intergenic | 50.0% |
! | GACGGAGAAGAAGGGTTTTG+TGG | - | chr8_2:8397246-8397265 | None:intergenic | 50.0% |
GTGAGTTCGACGGAGAAGAA+GGG | - | chr8_2:8397254-8397273 | None:intergenic | 50.0% | |
GTTGGTTAGGGTGAGTTCGA+CGG | - | chr8_2:8397264-8397283 | None:intergenic | 50.0% | |
!! | CGGGTTCTAGATGAGACGAT+GGG | - | chr8_2:8397324-8397343 | None:intergenic | 50.0% |
!! | ACGGGTTCTAGATGAGACGA+TGG | - | chr8_2:8397325-8397344 | None:intergenic | 50.0% |
ACTATGCTTGCAAAACGGGG+TGG | + | chr8_2:8397622-8397641 | Msa1232120:CDS | 50.0% | |
TCTCACGAAACTCCGACAAC+GGG | - | chr8_2:8397835-8397854 | None:intergenic | 50.0% | |
! | GGACTCTGATGCTGAGGTTT+TGG | + | chr8_2:8397908-8397927 | Msa1232120:intron | 50.0% |
AATAGATTTGGGGGGGTTGG+GGG | - | chr8_2:8398171-8398190 | None:intergenic | 50.0% | |
CTGACACTGCTCATTTACCC+TGG | - | chr8_2:8398491-8398510 | None:intergenic | 50.0% | |
CAGGGTAAATGAGCAGTGTC+AGG | + | chr8_2:8398489-8398508 | Msa1232120:intron | 50.0% | |
TGAATAGGTCCAAGCAGCTG+AGG | + | chr8_2:8399097-8399116 | Msa1232120:intron | 50.0% | |
! | TACTGGCCTGTCTTCATCAG+TGG | - | chr8_2:8399186-8399205 | None:intergenic | 50.0% |
TTAACCCCTCACAAATCCCC+TGG | + | chr8_2:8399450-8399469 | Msa1232120:intron | 50.0% | |
GACACGTCAGAAAAGTTGCC+AGG | + | chr8_2:8399506-8399525 | Msa1232120:intron | 50.0% | |
CACGTCAGAAAAGTTGCCAG+GGG | + | chr8_2:8399508-8399527 | Msa1232120:intron | 50.0% | |
AGGGGTTGTTACCAGGGAAA+GGG | + | chr8_2:8399526-8399545 | Msa1232120:CDS | 50.0% | |
TAGCTCCTGGCAAATTGCGT+GGG | - | chr8_2:8399553-8399572 | None:intergenic | 50.0% | |
TTAGCTCCTGGCAAATTGCG+TGG | - | chr8_2:8399554-8399573 | None:intergenic | 50.0% | |
CATCGCAAATGAACCTGCCA+GGG | - | chr8_2:8399579-8399598 | None:intergenic | 50.0% | |
TCATCGCAAATGAACCTGCC+AGG | - | chr8_2:8399580-8399599 | None:intergenic | 50.0% | |
TTTGCTGGGTATTCTGCTCC+TGG | + | chr8_2:8399605-8399624 | Msa1232120:CDS | 50.0% | |
TTGGCAAATGGACGTTTGCC+AGG | - | chr8_2:8399638-8399657 | None:intergenic | 50.0% | |
TGGCAAACGTCCATTTGCCA+AGG | + | chr8_2:8399637-8399656 | Msa1232120:CDS | 50.0% | |
! | TCCACGTCCTTGTTTGAAGG+TGG | + | chr8_2:8400832-8400851 | Msa1232120:CDS | 50.0% |
TCCACCTTCAAACAAGGACG+TGG | - | chr8_2:8400836-8400855 | None:intergenic | 50.0% | |
GCCACACTTGCGAAACAACA+CGG | + | chr8_2:8401049-8401068 | Msa1232120:CDS | 50.0% | |
!! | TCCGTGTTGTTTCGCAAGTG+TGG | - | chr8_2:8401053-8401072 | None:intergenic | 50.0% |
ACACTTGCGAAACAACACGG+AGG | + | chr8_2:8401052-8401071 | Msa1232120:CDS | 50.0% | |
CACTTGCGAAACAACACGGA+GGG | + | chr8_2:8401053-8401072 | Msa1232120:CDS | 50.0% | |
! | CACGGAGGGTATGAGAAAGT+TGG | + | chr8_2:8401067-8401086 | Msa1232120:CDS | 50.0% |
!! | CGTCGTCTGACTTTGGAATC+AGG | + | chr8_2:8401130-8401149 | Msa1232120:CDS | 50.0% |
AGACCTCGGAGACTTTCACA+TGG | + | chr8_2:8401422-8401441 | Msa1232120:CDS | 50.0% | |
CAACCATGTGAAAGTCTCCG+AGG | - | chr8_2:8401428-8401447 | None:intergenic | 50.0% | |
! | GGAGCTCCTTTTGTGTTTGC+TGG | - | chr8_2:8402558-8402577 | None:intergenic | 50.0% |
GGTCGTAAGAGAACAAGCAG+TGG | + | chr8_2:8402606-8402625 | Msa1232120:CDS | 50.0% | |
! | GGAGGATGGTAGGTGTGTTT+TGG | + | chr8_2:8403527-8403546 | Msa1232120:intron | 50.0% |
TTCATGCAAAACAGCCGGGT+AGG | - | chr8_2:8403819-8403838 | None:intergenic | 50.0% | |
CTGGAAACGCGTATGCTAAG+TGG | + | chr8_2:8404673-8404692 | Msa1232120:intron | 50.0% | |
ACGCGTATGCTAAGTGGATG+TGG | + | chr8_2:8404679-8404698 | Msa1232120:intron | 50.0% | |
TTGCTTGGTTCCCAAGCAAC+AGG | + | chr8_2:8405081-8405100 | Msa1232120:CDS | 50.0% | |
TGCTTGGTTCCCAAGCAACA+GGG | + | chr8_2:8405082-8405101 | Msa1232120:CDS | 50.0% | |
! | CGCAAATACCCCTGTTGCTT+GGG | - | chr8_2:8405094-8405113 | None:intergenic | 50.0% |
ACGCAAATACCCCTGTTGCT+TGG | - | chr8_2:8405095-8405114 | None:intergenic | 50.0% | |
CTCCTGGCAGATGCAAAAGG+TGG | - | chr8_2:8397087-8397106 | None:intergenic | 55.0% | |
GGTGAGTTCGACGGAGAAGA+AGG | - | chr8_2:8397255-8397274 | None:intergenic | 55.0% | |
! | TGAGGTGGACTCTGATGCTG+AGG | + | chr8_2:8397902-8397921 | Msa1232120:intron | 55.0% |
ATAGATTTGGGGGGGTTGGG+GGG | - | chr8_2:8398170-8398189 | None:intergenic | 55.0% | |
CCATCTGCTGCGTTTAGCCA+GGG | + | chr8_2:8398471-8398490 | Msa1232120:intron | 55.0% | |
! | AGCAGTGTCAGGAGTGTGTG+TGG | + | chr8_2:8398500-8398519 | Msa1232120:intron | 55.0% |
! | AGCTGAGGCGTCAAAGCCTA+AGG | + | chr8_2:8399112-8399131 | Msa1232120:CDS | 55.0% |
GTTGCCAGGGGATTTGTGAG+GGG | - | chr8_2:8399457-8399476 | None:intergenic | 55.0% | |
CGTTGCCAGGGGATTTGTGA+GGG | - | chr8_2:8399458-8399477 | None:intergenic | 55.0% | |
ACGTTGCCAGGGGATTTGTG+AGG | - | chr8_2:8399459-8399478 | None:intergenic | 55.0% | |
AGTTGCCAGGGGTTGTTACC+AGG | + | chr8_2:8399519-8399538 | Msa1232120:intron | 55.0% | |
GTTGCCAGGGGTTGTTACCA+GGG | + | chr8_2:8399520-8399539 | Msa1232120:intron | 55.0% | |
CTTTCCCTGGTAACAACCCC+TGG | - | chr8_2:8399527-8399546 | None:intergenic | 55.0% | |
CAGGGGTTGTTACCAGGGAA+AGG | + | chr8_2:8399525-8399544 | Msa1232120:CDS | 55.0% | |
AGCTCCTGGCAAATTGCGTG+GGG | - | chr8_2:8399552-8399571 | None:intergenic | 55.0% | |
TTTGCCAGGAGCTAAAGCCC+TGG | + | chr8_2:8399559-8399578 | Msa1232120:CDS | 55.0% | |
TCTGCTCCTGGCAAAACTCC+TGG | + | chr8_2:8399617-8399636 | Msa1232120:CDS | 55.0% | |
! | CGTTTGCCAGGAGTTTTGCC+AGG | - | chr8_2:8399626-8399645 | None:intergenic | 55.0% |
GCTAGGCGCCAAAACGTTTG+AGG | - | chr8_2:8400144-8400163 | None:intergenic | 55.0% | |
ACTTGGCTTAGGGCAATGGG+TGG | + | chr8_2:8401454-8401473 | Msa1232120:CDS | 55.0% | |
AGCTAGTTACCCCACCTACC+CGG | + | chr8_2:8403802-8403821 | Msa1232120:intron | 55.0% | |
TGCAAAACAGCCGGGTAGGT+GGG | - | chr8_2:8403815-8403834 | None:intergenic | 55.0% | |
ATGCAAAACAGCCGGGTAGG+TGG | - | chr8_2:8403816-8403835 | None:intergenic | 55.0% | |
TTTATAGCCCGCTGTGGGCT+TGG | + | chr8_2:8405051-8405070 | Msa1232120:CDS | 55.0% | |
TTATAGCCCGCTGTGGGCTT+GGG | + | chr8_2:8405052-8405071 | Msa1232120:CDS | 55.0% | |
GCTTGGTTCCCAAGCAACAG+GGG | + | chr8_2:8405083-8405102 | Msa1232120:CDS | 55.0% | |
TAGATTTGGGGGGGTTGGGG+GGG | - | chr8_2:8398169-8398188 | None:intergenic | 60.0% | |
GGCTAAACGCAGCAGATGGC+AGG | - | chr8_2:8398470-8398489 | None:intergenic | 60.0% | |
GCCATCTGCTGCGTTTAGCC+AGG | + | chr8_2:8398470-8398489 | Msa1232120:intron | 60.0% | |
CCCTGGCTAAACGCAGCAGA+TGG | - | chr8_2:8398474-8398493 | None:intergenic | 60.0% | |
GTGTGGCCTATGAGCTGCTG+CGG | + | chr8_2:8398517-8398536 | Msa1232120:intron | 60.0% | |
CTCTAGCCGCAGCAGCTCAT+AGG | - | chr8_2:8398526-8398545 | None:intergenic | 60.0% | |
GCTTTGACGCCTCAGCTGCT+TGG | - | chr8_2:8399109-8399128 | None:intergenic | 60.0% | |
GCAAAACAGCCGGGTAGGTG+GGG | - | chr8_2:8403814-8403833 | None:intergenic | 60.0% | |
TGGTGGTCGGGTTTGAACCC+CGG | + | chr8_2:8404438-8404457 | Msa1232120:intron | 60.0% | |
ACCGAAACCCAAGCCCACAG+CGG | - | chr8_2:8405062-8405081 | None:intergenic | 60.0% | |
GGGCTTGGGTTTCGGTTGCT+TGG | + | chr8_2:8405066-8405085 | Msa1232120:CDS | 60.0% | |
CTTAGAAGGGCGGTGCCTCA+AGG | + | chr8_2:8405146-8405165 | Msa1232120:CDS | 60.0% | |
GTCTCAGGAGCCCTTCTGGA+GGG | + | chr8_2:8405182-8405201 | Msa1232120:CDS | 60.0% | |
ATTGCGTGGGGCCCTTTCCC+TGG | - | chr8_2:8399540-8399559 | None:intergenic | 65.0% | |
AGGGCCCCACGCAATTTGCC+AGG | + | chr8_2:8399545-8399564 | Msa1232120:CDS | 65.0% | |
! | CCTGCCAGGGCTTTAGCTCC+TGG | - | chr8_2:8399566-8399585 | None:intergenic | 65.0% |
CCAGGAGCTAAAGCCCTGGC+AGG | + | chr8_2:8399563-8399582 | Msa1232120:CDS | 65.0% | |
TTTGCCAGGGCTTCTGCCCC+TGG | + | chr8_2:8399670-8399689 | Msa1232120:CDS | 65.0% | |
TTTGCCAGGGGCAGAAGCCC+TGG | - | chr8_2:8399677-8399696 | None:intergenic | 65.0% | |
CCGAAACCCAAGCCCACAGC+GGG | - | chr8_2:8405061-8405080 | None:intergenic | 65.0% | |
CCCGCTGTGGGCTTGGGTTT+CGG | + | chr8_2:8405058-8405077 | Msa1232120:CDS | 65.0% | |
CAGAAGGGCTCCTGAGACCC+TGG | - | chr8_2:8405180-8405199 | None:intergenic | 65.0% | |
CAGGGTCTCAGGAGCCCTTC+TGG | + | chr8_2:8405178-8405197 | Msa1232120:CDS | 65.0% | |
GGTCTCAGGAGCCCTTCTGG+AGG | + | chr8_2:8405181-8405200 | Msa1232120:CDS | 65.0% | |
GGCTCAAGCGCCCTCCAGAA+GGG | - | chr8_2:8405195-8405214 | None:intergenic | 65.0% | |
GGGCTCAAGCGCCCTCCAGA+AGG | - | chr8_2:8405196-8405215 | None:intergenic | 70.0% | |
!! | GGAGGGCGCTTGAGCCCTTC+TGG | + | chr8_2:8405199-8405218 | Msa1232120:CDS | 70.0% |
GGGCGCTTGAGCCCTTCTGG+AGG | + | chr8_2:8405202-8405221 | Msa1232120:CDS | 70.0% | |
TGGGGGGGTTGGGGGGGTCA+TGG | - | chr8_2:8398163-8398182 | None:intergenic | 75.0% | |
TGCCTCAAGGCGAGCGCGCC+AGG | + | chr8_2:8405159-8405178 | Msa1232120:CDS | 75.0% | |
GCCTCAAGGCGAGCGCGCCA+GGG | + | chr8_2:8405160-8405179 | Msa1232120:CDS | 75.0% | |
ACCCTGGCGCGCTCGCCTTG+AGG | - | chr8_2:8405164-8405183 | None:intergenic | 75.0% | |
! | GGCGAGCGCGCCAGGGTCTC+AGG | + | chr8_2:8405167-8405186 | Msa1232120:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 8397060 | 8405230 | 8397060 | ID=Msa1232120;Name=Msa1232120 |
chr8_2 | mRNA | 8397060 | 8405230 | 8397060 | ID=Msa1232120-mRNA-1;Parent=Msa1232120;Name=Msa1232120-mRNA-1;_AED=0.57;_eAED=0.58;_QI=0|0|0|0.11|1|1|9|0|953 |
chr8_2 | exon | 8397060 | 8397078 | 8397060 | ID=Msa1232120-mRNA-1:exon:3307;Parent=Msa1232120-mRNA-1 |
chr8_2 | exon | 8397610 | 8397674 | 8397610 | ID=Msa1232120-mRNA-1:exon:3308;Parent=Msa1232120-mRNA-1 |
chr8_2 | exon | 8397821 | 8397895 | 8397821 | ID=Msa1232120-mRNA-1:exon:3309;Parent=Msa1232120-mRNA-1 |
chr8_2 | exon | 8399104 | 8399202 | 8399104 | ID=Msa1232120-mRNA-1:exon:3310;Parent=Msa1232120-mRNA-1 |
chr8_2 | exon | 8399521 | 8399718 | 8399521 | ID=Msa1232120-mRNA-1:exon:3311;Parent=Msa1232120-mRNA-1 |
chr8_2 | exon | 8400545 | 8402641 | 8400545 | ID=Msa1232120-mRNA-1:exon:3312;Parent=Msa1232120-mRNA-1 |
chr8_2 | exon | 8402755 | 8402832 | 8402755 | ID=Msa1232120-mRNA-1:exon:3313;Parent=Msa1232120-mRNA-1 |
chr8_2 | exon | 8403306 | 8403327 | 8403306 | ID=Msa1232120-mRNA-1:exon:3314;Parent=Msa1232120-mRNA-1 |
chr8_2 | exon | 8405022 | 8405230 | 8405022 | ID=Msa1232120-mRNA-1:exon:3315;Parent=Msa1232120-mRNA-1 |
chr8_2 | CDS | 8397060 | 8397078 | 8397060 | ID=Msa1232120-mRNA-1:cds;Parent=Msa1232120-mRNA-1 |
chr8_2 | CDS | 8397610 | 8397674 | 8397610 | ID=Msa1232120-mRNA-1:cds;Parent=Msa1232120-mRNA-1 |
chr8_2 | CDS | 8397821 | 8397895 | 8397821 | ID=Msa1232120-mRNA-1:cds;Parent=Msa1232120-mRNA-1 |
chr8_2 | CDS | 8399104 | 8399202 | 8399104 | ID=Msa1232120-mRNA-1:cds;Parent=Msa1232120-mRNA-1 |
chr8_2 | CDS | 8399521 | 8399718 | 8399521 | ID=Msa1232120-mRNA-1:cds;Parent=Msa1232120-mRNA-1 |
chr8_2 | CDS | 8400545 | 8402641 | 8400545 | ID=Msa1232120-mRNA-1:cds;Parent=Msa1232120-mRNA-1 |
chr8_2 | CDS | 8402755 | 8402832 | 8402755 | ID=Msa1232120-mRNA-1:cds;Parent=Msa1232120-mRNA-1 |
chr8_2 | CDS | 8403306 | 8403327 | 8403306 | ID=Msa1232120-mRNA-1:cds;Parent=Msa1232120-mRNA-1 |
chr8_2 | CDS | 8405022 | 8405230 | 8405022 | ID=Msa1232120-mRNA-1:cds;Parent=Msa1232120-mRNA-1 |
Gene Sequence |
Protein sequence |