AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1232930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1232930 MtrunA17_Chr8g0342481 83.619 409 52 3 1 402 1 401 0.0 682
Msa1232930 MtrunA17_Chr8g0342481 50.667 150 61 7 297 438 153 297 6.64e-23 100
Msa1232930 MtrunA17_Chr8g0342541 67.657 303 78 10 1 296 1 290 3.48e-125 368
Msa1232930 MtrunA17_Chr8g0342541 54.696 181 55 9 297 460 153 323 1.73e-36 137
Msa1232930 MtrunA17_Chr8g0342521 66.556 302 82 9 1 296 1 289 7.81e-122 359
Msa1232930 MtrunA17_Chr8g0342521 46.948 213 83 10 268 460 120 322 8.12e-34 130
Msa1232930 MtrunA17_Chr2g0330041 56.230 313 104 16 1 286 1 307 1.08e-87 274
Msa1232930 MtrunA17_Chr2g0309911 75.806 124 28 2 1 124 1 122 1.74e-61 203
Msa1232930 MtrunA17_Chr1g0193371 70.968 124 35 1 1 124 1 123 1.51e-58 197
Msa1232930 MtrunA17_Chr7g0270891 71.774 124 34 1 1 124 1 123 2.40e-58 196
Msa1232930 MtrunA17_Chr1g0193801 70.161 124 36 1 1 124 1 123 2.49e-58 197
Msa1232930 MtrunA17_Chr8g0342461 94.444 90 5 0 1 90 1 90 5.53e-58 188
Msa1232930 MtrunA17_Chr8g0342471 93.333 90 6 0 1 90 1 90 2.46e-57 186
Msa1232930 MtrunA17_Chr4g0058631 59.740 154 60 2 1 153 1 153 7.22e-57 192
Msa1232930 MtrunA17_Chr1g0211161 69.919 123 36 1 3 125 4 125 1.54e-56 187
Msa1232930 MtrunA17_Chr3g0117091 69.600 125 37 1 1 125 1 124 2.32e-56 191
Msa1232930 MtrunA17_Chr5g0397231 72.072 111 30 1 1 111 1 110 2.43e-54 185
Msa1232930 MtrunA17_Chr7g0271241 71.774 124 34 1 1 124 1 123 2.57e-54 186
Msa1232930 MtrunA17_Chr8g0387421 69.231 117 35 1 1 117 1 116 5.92e-54 183
Msa1232930 MtrunA17_Chr8g0342511 86.364 88 11 1 1 88 1 87 4.59e-50 166
Msa1232930 MtrunA17_Chr8g0342531 85.556 90 12 1 1 90 1 89 5.28e-50 168
Msa1232930 MtrunA17_Chr8g0385321 60.800 125 48 1 1 125 1 124 1.63e-48 169
Msa1232930 MtrunA17_Chr4g0037141 56.115 139 54 2 1 139 1 132 4.34e-48 167
Msa1232930 MtrunA17_Chr3g0088461 67.273 110 35 1 8 117 18 126 5.94e-48 168
Msa1232930 MtrunA17_Chr5g0435101 62.185 119 44 1 6 124 5 122 2.17e-47 162
Msa1232930 MtrunA17_Chr3g0131121 59.677 124 49 1 1 124 1 123 8.33e-47 164
Msa1232930 MtrunA17_Chr4g0032401 68.224 107 33 1 11 117 16 121 3.61e-46 163
Msa1232930 MtrunA17_Chr3g0115821 56.452 124 53 1 1 124 1 123 6.44e-46 163
Msa1232930 MtrunA17_Chr4g0057031 59.677 124 49 1 1 124 1 123 1.13e-45 160
Msa1232930 MtrunA17_Chr2g0328771 66.981 106 34 1 12 117 20 124 2.02e-45 161
Msa1232930 MtrunA17_Chr3g0110351 59.677 124 49 1 1 124 1 123 2.81e-45 160
Msa1232930 MtrunA17_Chr1g0203411 59.829 117 46 1 1 117 1 116 3.13e-45 159
Msa1232930 MtrunA17_Chr5g0410961 58.065 124 51 1 1 124 1 123 3.62e-45 161
Msa1232930 MtrunA17_Chr2g0323351 57.851 121 48 2 1 120 1 119 9.61e-45 157
Msa1232930 MtrunA17_Chr4g0039971 55.645 124 54 1 1 124 2 124 1.10e-44 160
Msa1232930 MtrunA17_Chr5g0434571 59.677 124 49 1 1 124 37 159 1.17e-44 160
Msa1232930 MtrunA17_Chr4g0044421 59.677 124 49 1 1 124 1 123 1.87e-44 154
Msa1232930 MtrunA17_Chr1g0151941 46.250 160 86 0 1 160 1 160 3.07e-44 155
Msa1232930 MtrunA17_Chr4g0048511 55.970 134 56 3 1 132 1 133 3.65e-44 159
Msa1232930 MtrunA17_Chr7g0274581 50.350 143 63 2 1 143 1 135 6.19e-44 153
Msa1232930 MtrunA17_Chr2g0323411 56.061 132 56 2 1 131 1 131 6.30e-44 157
Msa1232930 MtrunA17_Chr2g0281071 57.600 125 51 2 1 124 1 124 8.58e-44 157
Msa1232930 MtrunA17_Chr6g0453471 54.839 124 55 1 1 124 1 123 2.72e-43 156
Msa1232930 MtrunA17_Chr2g0311221 60.000 110 43 1 2 111 4 112 3.33e-43 155
Msa1232930 MtrunA17_Chr1g0203441 63.636 110 39 1 8 117 9 117 4.23e-43 153
Msa1232930 MtrunA17_Chr4g0042671 54.400 125 56 1 1 125 1 124 7.95e-43 156
Msa1232930 MtrunA17_Chr7g0217741 49.020 153 67 3 1 153 1 142 1.00e-42 153
Msa1232930 MtrunA17_Chr4g0070611 56.410 117 50 1 1 117 1 116 1.18e-42 153
Msa1232930 MtrunA17_Chr7g0228891 60.684 117 45 1 1 117 1 116 1.38e-42 152
Msa1232930 MtrunA17_Chr1g0187761 59.829 117 46 1 1 117 1 116 1.70e-42 151
Msa1232930 MtrunA17_Chr4g0022901 48.684 152 67 3 5 147 6 155 2.39e-42 151
Msa1232930 MtrunA17_Chr4g0070641 56.410 117 50 1 1 117 1 116 2.65e-42 148
Msa1232930 MtrunA17_Chr6g0470971 59.664 119 47 1 9 127 11 128 3.39e-42 151
Msa1232930 MtrunA17_Chr4g0022931 57.895 114 45 2 5 117 6 117 3.93e-42 150
Msa1232930 MtrunA17_Chr6g0452271 56.452 124 53 1 1 124 1 123 4.08e-42 152
Msa1232930 MtrunA17_Chr5g0395281 59.292 113 45 1 12 124 12 123 7.45e-42 151
Msa1232930 MtrunA17_Chr8g0349261 55.200 125 55 1 1 124 1 125 7.55e-42 150
Msa1232930 MtrunA17_Chr1g0167661 55.932 118 51 1 1 118 1 117 3.12e-41 147
Msa1232930 MtrunA17_Chr3g0121241 55.462 119 52 1 6 124 36 153 4.18e-41 149
Msa1232930 MtrunA17_Chr1g0194951 39.091 220 96 5 1 217 1 185 1.36e-40 149
Msa1232930 MtrunA17_Chr7g0275911 56.410 117 50 1 1 117 1 116 1.45e-40 146
Msa1232930 MtrunA17_Chr7g0261281 55.556 117 51 1 1 117 1 116 2.57e-40 146
Msa1232930 MtrunA17_Chr3g0103281 55.385 130 56 2 1 129 1 129 2.74e-40 147
Msa1232930 MtrunA17_Chr1g0167691 55.085 118 52 1 1 118 1 117 4.01e-40 145
Msa1232930 MtrunA17_Chr8g0346561 54.701 117 52 1 1 117 1 116 1.17e-39 145
Msa1232930 MtrunA17_Chr4g0022911 53.226 124 55 3 1 123 1 122 2.39e-39 144
Msa1232930 MtrunA17_Chr4g0028311 53.782 119 55 0 1 119 1 119 4.01e-39 144
Msa1232930 MtrunA17_Chr1g0152011 52.941 119 56 0 1 119 1 119 5.42e-39 144
Msa1232930 MtrunA17_Chr4g0068061 50.382 131 62 2 1 129 1 130 7.34e-39 144
Msa1232930 MtrunA17_Chr5g0400821 52.101 119 57 0 1 119 1 119 6.31e-38 140
Msa1232930 MtrunA17_Chr8g0343831 56.364 110 47 1 8 117 4 112 8.95e-38 138
Msa1232930 MtrunA17_Chr3g0135311 50.420 119 59 0 1 119 1 119 1.04e-37 141
Msa1232930 MtrunA17_Chr4g0055981 57.798 109 45 1 8 116 51 158 4.17e-37 136
Msa1232930 MtrunA17_Chr7g0264641 51.261 119 58 0 1 119 1 119 5.10e-37 137
Msa1232930 MtrunA17_Chr4g0054391 56.364 110 48 0 1 110 1 110 5.19e-37 137
Msa1232930 MtrunA17_Chr2g0327351 54.054 111 51 0 1 111 1 111 1.06e-36 137
Msa1232930 MtrunA17_Chr7g0228231 54.701 117 50 2 1 115 1 116 2.81e-36 133
Msa1232930 MtrunA17_Chr7g0240821 59.406 101 40 1 17 117 6 105 2.95e-36 134
Msa1232930 MtrunA17_Chr6g0450101 55.856 111 48 1 11 121 13 122 3.59e-36 132
Msa1232930 MtrunA17_Chr7g0217221 52.137 117 55 1 1 117 1 116 7.33e-36 134
Msa1232930 MtrunA17_Chr5g0417821 55.263 114 50 1 12 125 7 119 8.23e-36 134
Msa1232930 MtrunA17_Chr7g0269831 55.462 119 52 1 1 119 1 118 1.24e-35 135
Msa1232930 MtrunA17_Chr4g0022881 53.271 107 49 1 9 115 9 114 2.68e-35 131
Msa1232930 MtrunA17_Chr4g0072751 51.351 111 54 0 1 111 1 111 1.14e-34 132
Msa1232930 MtrunA17_Chr3g0092401 52.137 117 55 1 1 117 2 117 1.55e-34 131
Msa1232930 MtrunA17_Chr1g0209661 50.394 127 58 3 8 131 21 145 2.13e-34 131
Msa1232930 MtrunA17_Chr1g0186061 50.893 112 54 1 5 116 13 123 3.20e-34 129
Msa1232930 MtrunA17_Chr1g0168661 51.327 113 54 1 4 116 13 124 3.28e-34 129
Msa1232930 MtrunA17_Chr4g0060721 48.333 120 61 1 1 120 2 120 6.85e-34 130
Msa1232930 MtrunA17_Chr6g0453211 52.252 111 52 1 1 111 1 110 1.43e-33 129
Msa1232930 MtrunA17_Chr7g0254411 49.573 117 58 1 1 117 1 116 1.76e-33 129
Msa1232930 MtrunA17_Chr6g0487491 47.407 135 63 1 1 127 1 135 2.45e-33 127
Msa1232930 MtrunA17_Chr1g0194291 52.381 105 49 1 12 116 21 124 2.62e-33 127
Msa1232930 MtrunA17_Chr4g0022891 55.340 103 45 1 9 111 9 110 2.69e-33 126
Msa1232930 MtrunA17_Chr1g0180391 50.943 106 51 1 12 117 19 123 4.02e-33 125
Msa1232930 MtrunA17_Chr5g0434911 51.327 113 54 1 7 119 16 127 8.98e-33 125
Msa1232930 MtrunA17_Chr7g0220341 53.636 110 48 2 12 119 25 133 1.97e-32 124
Msa1232930 MtrunA17_Chr4g0042611 56.180 89 38 1 1 89 1 88 2.41e-32 118
Msa1232930 MtrunA17_Chr3g0099131 52.381 105 49 1 12 116 41 144 2.59e-32 129
Msa1232930 MtrunA17_Chr5g0434931 50.450 111 54 1 12 122 35 144 2.80e-32 124
Msa1232930 MtrunA17_Chr1g0154031 52.381 105 49 1 12 116 76 179 3.78e-32 127
Msa1232930 MtrunA17_Chr7g0247131 66.667 81 27 0 44 124 9 89 5.37e-32 123
Msa1232930 MtrunA17_Chr1g0194301 48.571 105 53 1 12 116 33 136 5.91e-32 123
Msa1232930 MtrunA17_Chr8g0354661 51.429 105 50 1 12 116 37 140 1.19e-31 127
Msa1232930 MtrunA17_Chr5g0434831 51.402 107 51 1 12 118 7 112 2.47e-31 119
Msa1232930 MtrunA17_Chr2g0327821 48.148 108 55 1 9 116 3 109 4.46e-31 120
Msa1232930 MtrunA17_Chr3g0080861 46.154 117 60 2 12 128 37 150 6.16e-31 125
Msa1232930 MtrunA17_Chr7g0228991 51.852 108 51 1 12 119 29 135 1.10e-30 120
Msa1232930 MtrunA17_Chr8g0360111 52.427 103 48 1 12 114 25 126 4.19e-30 118
Msa1232930 MtrunA17_Chr4g0030881 45.763 118 56 2 6 116 1 117 7.92e-30 117
Msa1232930 MtrunA17_Chr2g0322521 51.376 109 52 1 8 116 25 132 3.12e-29 118
Msa1232930 MtrunA17_Chr5g0434841 48.598 107 54 1 12 118 20 125 5.69e-29 116
Msa1232930 MtrunA17_Chr2g0323321 55.682 88 36 2 7 93 6 91 2.30e-28 108
Msa1232930 MtrunA17_Chr4g0068921 51.923 104 49 1 12 115 24 126 5.77e-28 110
Msa1232930 MtrunA17_Chr8g0334881 50.459 109 52 2 4 111 2 109 1.16e-27 112
Msa1232930 MtrunA17_Chr2g0293911 51.923 104 49 1 12 115 24 126 1.57e-27 112
Msa1232930 MtrunA17_Chr1g0192411 49.057 106 53 1 11 116 11 115 2.33e-27 113
Msa1232930 MtrunA17_Chr5g0440781 48.113 106 51 3 12 115 12 115 2.04e-26 105
Msa1232930 MtrunA17_Chr4g0013361 52.475 101 46 2 12 111 10 109 4.24e-26 107
Msa1232930 MtrunA17_Chr5g0441141 47.619 105 53 2 12 115 12 115 5.37e-26 107
Msa1232930 MtrunA17_Chr5g0440761 48.113 106 51 3 12 115 12 115 5.77e-26 106
Msa1232930 MtrunA17_Chr2g0294811 51.685 89 42 1 1 89 1 88 1.41e-25 101
Msa1232930 MtrunA17_Chr5g0429661 45.631 103 54 1 14 116 122 222 1.55e-24 104
Msa1232930 MtrunA17_Chr5g0441131 43.750 112 61 2 5 115 2 112 2.49e-24 99.8
Msa1232930 MtrunA17_Chr5g0395221 55.556 81 35 1 9 89 9 88 2.52e-24 96.7
Msa1232930 MtrunA17_Chr7g0229101 61.429 70 27 0 44 113 3 72 2.84e-24 100
Msa1232930 MtrunA17_Chr5g0434901 61.194 67 26 0 47 113 7 73 1.69e-23 95.5
Msa1232930 MtrunA17_Chr7g0229131 56.000 75 33 0 44 118 3 77 2.00e-23 97.1
Msa1232930 MtrunA17_Chr7g0238631 47.619 105 51 3 14 117 113 214 7.45e-23 101
Msa1232930 MtrunA17_Chr6g0480581 48.077 104 48 4 14 115 4 103 1.15e-22 96.7
Msa1232930 MtrunA17_Chr3g0099141 50.602 83 40 1 12 94 40 121 1.75e-22 93.2
Msa1232930 MtrunA17_Chr4g0008551 44.860 107 55 3 14 119 38 141 3.64e-22 97.4
Msa1232930 MtrunA17_Chr3g0139671 38.571 140 69 4 14 152 85 208 2.02e-21 97.8
Msa1232930 MtrunA17_Chr4g0053431 47.573 103 52 2 14 116 5 105 2.23e-21 93.6
Msa1232930 MtrunA17_Chr5g0417621 44.340 106 57 1 11 116 131 234 5.56e-21 95.1
Msa1232930 MtrunA17_Chr4g0042501 42.609 115 59 2 2 116 98 205 6.54e-21 94.7
Msa1232930 MtrunA17_Chr6g0454921 44.915 118 56 5 14 126 15 128 1.11e-20 90.1
Msa1232930 MtrunA17_Chr1g0177901 54.667 75 33 1 38 112 17 90 1.58e-20 89.7
Msa1232930 MtrunA17_Chr6g0453751 48.936 94 36 3 13 94 17 110 2.44e-20 87.0
Msa1232930 MtrunA17_Chr1g0157731 43.810 105 55 3 14 117 91 192 2.89e-20 94.4
Msa1232930 MtrunA17_Chr5g0401731 46.154 104 52 3 14 116 15 115 3.73e-20 91.3
Msa1232930 MtrunA17_Chr4g0058991 42.202 109 59 3 9 116 204 309 3.95e-20 92.8
Msa1232930 MtrunA17_Chr3g0117511 41.441 111 59 4 9 116 176 283 7.47e-20 92.0
Msa1232930 MtrunA17_Chr3g0125801 46.602 103 53 1 14 116 16 116 1.35e-19 89.0
Msa1232930 MtrunA17_Chr7g0228531 42.718 103 56 3 14 116 220 319 4.11e-19 89.4
Msa1232930 MtrunA17_Chr3g0093811 43.299 97 54 1 44 139 13 109 1.24e-18 85.9
Msa1232930 MtrunA17_Chr7g0228401 35.507 138 55 4 14 124 255 385 2.50e-18 87.4
Msa1232930 MtrunA17_Chr3g0133601 44.231 104 54 3 14 116 37 137 4.94e-18 83.2
Msa1232930 MtrunA17_Chr6g0460661 41.237 97 55 1 11 107 13 107 6.83e-18 80.9
Msa1232930 MtrunA17_Chr5g0425591 43.478 92 50 2 5 95 2 92 7.47e-18 78.6
Msa1232930 MtrunA17_Chr5g0437321 43.564 101 53 3 14 113 19 116 8.15e-18 84.0
Msa1232930 MtrunA17_Chr5g0397841 42.708 96 51 3 17 111 113 205 1.72e-16 81.6
Msa1232930 MtrunA17_Chr6g0460671 40.952 105 56 4 14 116 99 199 2.23e-16 80.5
Msa1232930 MtrunA17_Chr7g0254261 40.952 105 58 3 13 116 88 189 2.60e-16 80.5
Msa1232930 MtrunA17_Chr7g0228481 40.000 105 58 4 14 118 220 319 1.11e-15 79.0
Msa1232930 MtrunA17_Chr7g0233061 35.354 99 60 3 14 112 180 274 1.80e-15 77.8
Msa1232930 MtrunA17_Chr7g0238651 39.394 99 57 2 13 109 6 103 1.47e-14 75.1
Msa1232930 MtrunA17_Chr5g0416341 38.000 100 60 2 17 116 29 126 3.08e-13 71.6
Msa1232930 MtrunA17_Chr5g0434871 57.778 45 19 0 75 119 2 46 4.09e-13 64.3
Msa1232930 MtrunA17_Chr8g0362231 36.792 106 64 2 17 122 25 127 1.26e-12 69.7
Msa1232930 MtrunA17_Chr1g0193901 46.032 63 32 2 8 69 7 68 2.60e-11 60.5
Msa1232930 MtrunA17_Chr1g0193891 46.032 63 32 2 8 69 7 68 2.60e-11 60.5
Msa1232930 MtrunA17_Chr1g0193871 46.032 63 32 2 8 69 7 68 2.60e-11 60.5
Msa1232930 MtrunA17_Chr1g0193881 46.032 63 32 2 8 69 7 68 2.60e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1232930 AT3G13890.2 84.034 119 18 1 1 119 1 118 6.80e-66 216
Msa1232930 AT3G13890.1 78.125 128 18 2 1 119 1 127 9.89e-63 208
Msa1232930 AT3G12720.1 77.049 122 27 1 4 125 14 134 3.02e-62 205
Msa1232930 AT1G57560.1 65.734 143 42 2 1 143 1 136 1.62e-60 201
Msa1232930 AT1G57560.2 71.774 124 34 1 1 124 1 123 9.93e-60 197
Msa1232930 AT5G26660.1 72.000 125 34 1 1 125 1 124 1.94e-59 199
Msa1232930 AT4G01680.3 71.774 124 34 1 1 124 1 123 4.24e-59 195
Msa1232930 AT1G09540.1 66.667 144 39 3 1 144 1 135 6.92e-59 198
Msa1232930 AT4G01680.1 71.774 124 34 1 1 124 1 123 1.12e-58 197
Msa1232930 AT1G63910.1 71.795 117 32 1 1 117 1 116 2.98e-56 191
Msa1232930 AT4G01680.2 65.441 136 34 2 1 124 1 135 3.74e-55 188
Msa1232930 AT4G12350.1 57.343 143 54 2 1 143 1 136 1.85e-50 174
Msa1232930 AT2G16720.1 59.200 125 50 1 1 125 1 124 7.36e-49 169
Msa1232930 AT4G34990.1 59.200 125 50 1 1 125 1 124 1.10e-47 166
Msa1232930 AT4G38620.1 46.409 181 82 5 1 180 1 167 3.04e-47 165
Msa1232930 AT4G22680.1 60.484 124 48 1 1 124 1 123 3.63e-47 164
Msa1232930 AT4G21440.1 48.824 170 79 4 1 164 1 168 4.22e-47 166
Msa1232930 AT1G22640.1 58.871 124 50 1 1 124 1 123 1.21e-46 162
Msa1232930 AT5G12870.1 68.519 108 33 1 10 117 16 122 2.14e-46 162
Msa1232930 AT4G09460.1 58.065 124 51 1 1 124 1 123 2.60e-46 161
Msa1232930 AT3G08500.1 64.407 118 38 2 3 117 18 134 3.22e-46 164
Msa1232930 AT1G66230.1 52.229 157 68 2 1 157 1 150 2.91e-45 160
Msa1232930 AT3G02940.2 56.452 124 53 1 1 124 1 123 3.17e-45 160
Msa1232930 AT4G05100.1 57.600 125 51 2 1 124 1 124 3.40e-45 160
Msa1232930 AT3G02940.1 56.452 124 53 1 1 124 1 123 5.70e-45 160
Msa1232930 AT3G02940.3 56.452 124 53 1 1 124 1 123 5.70e-45 160
Msa1232930 AT3G01140.2 55.645 124 54 1 1 124 1 123 9.12e-45 160
Msa1232930 AT5G54230.1 58.871 124 50 1 1 124 1 123 1.34e-44 159
Msa1232930 AT5G16600.1 59.677 124 49 1 1 124 1 123 1.44e-44 159
Msa1232930 AT1G34670.1 57.258 124 52 1 1 124 1 123 1.48e-44 160
Msa1232930 AT4G28110.1 55.645 124 54 1 1 124 1 123 1.82e-44 157
Msa1232930 AT5G65230.1 58.475 118 48 1 1 118 1 117 2.40e-44 158
Msa1232930 AT3G61250.1 56.452 124 53 1 1 124 1 123 3.08e-44 157
Msa1232930 AT5G15310.4 50.000 146 66 2 1 140 1 145 3.13e-44 156
Msa1232930 AT5G15310.1 50.000 146 66 2 1 140 1 145 3.64e-44 158
Msa1232930 AT5G15310.2 50.000 146 66 2 1 140 1 145 4.57e-44 157
Msa1232930 AT5G16770.4 49.686 159 75 4 1 158 1 155 6.97e-44 157
Msa1232930 AT5G16770.3 49.686 159 75 4 1 158 1 155 6.97e-44 157
Msa1232930 AT3G01140.1 57.143 119 50 1 6 124 49 166 1.64e-43 158
Msa1232930 AT5G16770.1 49.686 159 75 4 1 158 1 155 2.12e-43 156
Msa1232930 AT5G16770.2 49.686 159 75 4 1 158 1 155 2.12e-43 156
Msa1232930 AT4G17785.2 56.800 125 52 2 1 124 1 124 3.19e-43 156
Msa1232930 AT4G17785.1 56.800 125 52 2 1 124 1 124 3.59e-43 156
Msa1232930 AT1G35515.1 54.839 124 55 1 1 124 1 123 1.01e-42 150
Msa1232930 AT5G62320.1 51.095 137 59 2 2 131 3 138 1.81e-42 151
Msa1232930 AT5G10280.1 50.000 140 63 3 1 140 1 133 1.82e-42 154
Msa1232930 AT1G79180.1 61.607 112 42 1 6 117 8 118 1.99e-42 152
Msa1232930 AT5G56110.1 51.351 148 65 2 1 148 1 141 2.98e-42 153
Msa1232930 AT1G56160.1 61.607 112 42 1 6 117 8 118 3.09e-42 152
Msa1232930 AT5G23000.1 57.627 118 50 0 1 118 1 118 3.33e-42 153
Msa1232930 AT3G13540.1 50.345 145 68 2 6 147 17 160 4.00e-42 150
Msa1232930 AT5G07700.1 54.032 124 56 1 1 124 1 123 4.43e-42 153
Msa1232930 AT5G07700.2 54.032 124 56 1 1 124 1 123 4.43e-42 153
Msa1232930 AT5G07690.1 53.226 124 57 1 1 124 1 123 4.45e-42 153
Msa1232930 AT2G31180.1 58.974 117 47 1 1 117 1 116 5.76e-42 150
Msa1232930 AT5G52260.1 62.727 110 40 1 9 118 9 117 8.65e-42 150
Msa1232930 AT5G60890.1 47.945 146 69 3 1 146 1 139 9.32e-42 150
Msa1232930 AT3G23250.1 55.556 117 51 1 1 117 1 116 1.13e-41 150
Msa1232930 AT1G16490.1 60.000 115 45 1 6 120 8 121 3.13e-41 149
Msa1232930 AT5G49330.1 58.120 117 48 1 1 117 1 116 4.25e-41 150
Msa1232930 AT5G61420.2 51.613 124 59 1 1 124 1 123 6.94e-41 150
Msa1232930 AT1G06180.1 57.265 117 49 1 1 117 1 116 1.13e-40 146
Msa1232930 AT3G48920.1 58.182 110 45 1 8 117 14 122 1.17e-40 147
Msa1232930 AT2G47460.1 57.265 117 49 1 1 117 1 116 2.50e-40 149
Msa1232930 AT4G25560.1 62.385 109 40 1 10 118 8 115 3.41e-40 146
Msa1232930 AT1G18570.1 52.381 126 56 3 1 124 1 124 6.15e-40 147
Msa1232930 AT5G14340.1 46.296 162 80 2 1 162 13 167 6.17e-40 145
Msa1232930 AT3G28470.1 45.977 174 86 3 1 174 1 166 7.36e-40 146
Msa1232930 AT5G57620.1 52.941 119 56 0 1 119 1 119 1.82e-39 145
Msa1232930 AT3G12820.1 57.895 114 47 1 6 119 8 120 2.85e-39 142
Msa1232930 AT3G62610.1 53.846 117 53 1 1 117 1 116 4.00e-38 142
Msa1232930 AT3G27810.1 52.542 118 55 1 8 125 16 132 6.18e-38 138
Msa1232930 AT1G74080.1 52.800 125 56 2 1 124 1 123 7.19e-38 141
Msa1232930 AT3G49690.1 51.695 118 57 0 1 118 1 118 7.26e-38 140
Msa1232930 AT5G65790.1 52.542 118 56 0 1 118 1 118 1.13e-37 142
Msa1232930 AT5G35550.1 58.716 109 44 1 9 117 11 118 1.75e-37 138
Msa1232930 AT2G36890.1 51.261 119 58 0 1 119 1 119 2.76e-37 139
Msa1232930 AT2G36890.2 51.261 119 58 0 1 119 42 160 4.81e-37 139
Msa1232930 AT4G37780.1 51.261 119 58 0 1 119 1 119 6.92e-37 138
Msa1232930 AT3G01530.1 56.604 106 45 1 12 117 25 129 1.53e-36 134
Msa1232930 AT5G14750.1 49.600 125 59 2 14 135 18 141 1.98e-36 134
Msa1232930 AT5G40350.1 55.556 108 47 1 11 118 16 122 3.10e-36 133
Msa1232930 AT5G52600.1 51.163 129 57 2 8 131 8 135 3.69e-36 133
Msa1232930 AT1G79180.2 47.586 145 42 2 6 117 8 151 6.58e-36 136
Msa1232930 AT5G40330.1 39.548 177 98 3 14 186 14 185 1.21e-35 132
Msa1232930 AT1G74430.1 50.000 124 61 1 1 124 1 123 1.40e-35 133
Msa1232930 AT5G26660.2 73.750 80 21 0 46 125 14 93 4.30e-35 133
Msa1232930 AT1G74650.1 51.695 118 56 1 1 118 1 117 6.65e-35 133
Msa1232930 AT1G18710.1 52.632 114 51 2 12 124 12 123 9.11e-35 131
Msa1232930 AT3G47600.1 51.282 117 56 1 1 117 1 116 9.30e-35 133
Msa1232930 AT1G48000.1 52.632 114 51 2 11 122 31 143 1.10e-34 130
Msa1232930 AT3G27920.1 49.550 111 55 1 10 120 12 121 1.19e-34 129
Msa1232930 AT5G62470.2 51.282 117 56 1 1 117 1 116 4.53e-34 131
Msa1232930 AT1G08810.1 49.587 121 60 1 1 121 1 120 4.61e-34 129
Msa1232930 AT3G11440.2 40.230 174 90 5 5 174 31 194 1.77e-33 132
Msa1232930 AT4G13480.1 54.630 108 48 1 9 116 3 109 2.19e-33 127
Msa1232930 AT3G28910.1 50.427 117 57 1 1 117 1 116 3.70e-33 128
Msa1232930 AT3G11440.3 40.230 174 90 5 5 174 31 194 5.12e-33 132
Msa1232930 AT3G11440.4 40.230 174 90 5 5 174 31 194 5.12e-33 132
Msa1232930 AT3G11440.1 40.230 174 90 5 5 174 31 194 5.12e-33 132
Msa1232930 AT1G68320.1 47.541 122 63 1 10 131 17 137 6.67e-33 126
Msa1232930 AT3G30210.1 52.941 102 47 1 14 115 29 129 1.33e-32 125
Msa1232930 AT3G24310.1 53.153 111 51 1 9 119 15 124 1.61e-32 125
Msa1232930 AT5G62470.1 51.282 117 55 2 1 117 1 115 2.62e-32 126
Msa1232930 AT2G47190.1 47.619 105 54 1 12 116 20 123 2.99e-32 124
Msa1232930 AT5G06100.1 53.333 105 48 1 12 116 32 135 3.27e-32 128
Msa1232930 AT2G26960.1 50.467 107 52 1 9 115 17 122 3.94e-32 127
Msa1232930 AT5G06100.5 53.333 105 48 1 12 116 32 135 8.74e-32 128
Msa1232930 AT5G06100.2 53.333 105 48 1 12 116 32 135 8.74e-32 128
Msa1232930 AT5G06100.3 53.333 105 48 1 12 116 32 135 8.74e-32 128
Msa1232930 AT5G06100.4 53.333 105 48 1 12 116 32 135 8.74e-32 128
Msa1232930 AT4G26930.1 48.739 119 58 2 12 130 19 134 1.82e-31 125
Msa1232930 AT5G55020.1 49.167 120 52 3 12 124 26 143 5.52e-31 125
Msa1232930 AT1G66370.1 50.459 109 53 1 8 116 4 111 7.11e-31 120
Msa1232930 AT3G53200.1 50.926 108 52 1 9 116 6 112 7.30e-31 119
Msa1232930 AT1G66380.1 53.211 109 50 1 8 116 4 111 4.47e-30 114
Msa1232930 AT2G32460.1 45.536 112 60 1 5 116 11 121 4.85e-30 122
Msa1232930 AT3G06490.1 55.769 104 45 1 12 115 19 121 5.43e-30 119
Msa1232930 AT2G32460.2 48.571 105 53 1 12 116 6 109 5.67e-30 122
Msa1232930 AT5G59780.3 48.148 108 55 1 9 116 5 111 7.94e-30 117
Msa1232930 AT1G25340.1 49.515 103 51 1 14 116 20 121 8.60e-30 118
Msa1232930 AT3G27810.2 58.750 80 33 0 46 125 4 83 2.02e-29 114
Msa1232930 AT3G46130.1 48.624 109 54 2 9 116 5 112 7.51e-29 114
Msa1232930 AT2G26950.1 45.455 110 59 1 2 111 6 114 1.07e-28 117
Msa1232930 AT5G40350.2 63.014 73 27 0 46 118 5 77 2.82e-28 110
Msa1232930 AT5G49620.1 53.846 104 47 1 12 115 26 128 6.14e-28 113
Msa1232930 AT3G60460.1 51.887 106 49 2 7 111 6 110 6.86e-28 113
Msa1232930 AT5G14750.3 63.014 73 27 0 49 121 18 90 9.54e-28 109
Msa1232930 AT1G56650.1 53.211 109 50 1 8 116 4 111 1.49e-27 110
Msa1232930 AT5G35550.2 64.865 74 26 0 44 117 48 121 3.79e-27 110
Msa1232930 AT1G66390.1 52.294 109 51 1 8 116 4 111 4.93e-27 109
Msa1232930 AT5G40360.1 31.925 213 133 6 9 220 153 354 2.47e-26 110
Msa1232930 AT3G12820.2 61.972 71 27 0 49 119 2 72 1.90e-25 103
Msa1232930 AT1G25340.2 46.602 103 49 2 14 116 20 116 5.00e-25 104
Msa1232930 AT1G25340.3 46.602 103 49 2 14 116 20 116 9.89e-25 104
Msa1232930 AT5G49620.2 47.458 118 47 2 12 115 26 142 1.82e-24 103
Msa1232930 AT3G46130.3 58.333 72 30 0 45 116 9 80 3.41e-24 100
Msa1232930 AT3G47600.2 50.000 94 42 1 24 117 22 110 4.31e-24 103
Msa1232930 AT5G59780.2 59.155 71 29 0 46 116 20 90 7.36e-24 99.8
Msa1232930 AT3G53200.2 59.155 71 29 0 46 116 9 79 1.12e-23 99.0
Msa1232930 AT1G66380.3 59.740 77 31 0 40 116 2 78 1.18e-23 95.9
Msa1232930 AT3G46130.4 59.155 71 29 0 46 116 20 90 1.18e-23 99.8
Msa1232930 AT3G27785.1 43.396 106 56 3 8 112 183 285 1.53e-22 100
Msa1232930 AT1G69560.1 42.373 118 64 2 2 117 93 208 2.05e-22 98.2
Msa1232930 AT1G69560.2 42.373 118 64 2 2 117 109 224 2.82e-22 98.2
Msa1232930 AT4G18770.1 43.243 111 59 3 8 117 211 318 2.83e-22 99.4
Msa1232930 AT5G58850.1 43.269 104 55 3 14 116 105 205 3.13e-22 99.4
Msa1232930 AT5G11050.1 46.000 100 50 3 14 112 105 201 4.24e-22 99.0
Msa1232930 AT5G02320.1 44.762 105 54 3 14 117 127 228 1.08e-21 98.6
Msa1232930 AT5G02320.2 44.762 105 54 3 14 117 127 228 1.08e-21 98.6
Msa1232930 AT5G02320.3 44.762 105 54 3 14 117 67 168 1.16e-21 98.2
Msa1232930 AT1G22640.3 63.636 66 24 0 59 124 1 66 1.48e-21 92.8
Msa1232930 AT3G09370.2 42.857 119 60 4 14 127 135 250 3.23e-21 97.1
Msa1232930 AT3G09370.1 42.857 119 60 4 14 127 130 245 3.37e-21 96.7
Msa1232930 AT1G18960.1 39.286 140 68 6 5 142 4 128 6.16e-21 93.6
Msa1232930 AT3G09370.3 42.857 119 60 4 14 127 143 258 6.20e-21 95.9
Msa1232930 AT5G11510.3 35.374 147 88 4 14 156 81 224 8.15e-21 96.7
Msa1232930 AT5G11510.1 35.374 147 88 4 14 156 81 224 8.15e-21 96.7
Msa1232930 AT5G11510.4 35.374 147 88 4 14 156 81 224 8.15e-21 96.7
Msa1232930 AT5G11510.5 35.374 147 88 4 14 156 81 224 8.42e-21 96.3
Msa1232930 AT5G11510.2 35.374 147 88 4 14 156 81 224 8.48e-21 96.3
Msa1232930 AT1G17950.1 45.714 105 51 4 14 116 5 105 1.14e-20 91.7
Msa1232930 AT1G26780.2 42.857 105 58 1 12 116 96 198 1.50e-20 93.6
Msa1232930 AT1G26780.1 42.857 105 58 1 12 116 96 198 1.83e-20 91.7
Msa1232930 AT2G39880.1 45.536 112 52 3 8 116 45 150 5.99e-20 91.7
Msa1232930 AT1G73410.1 46.667 105 50 4 14 116 6 106 8.41e-20 89.0
Msa1232930 AT5G67300.1 46.154 104 52 3 14 116 6 106 8.93e-20 90.1
Msa1232930 AT1G73410.2 46.226 106 51 4 13 116 5 106 2.30e-19 86.7
Msa1232930 AT3G09230.1 44.444 108 52 2 14 118 55 157 2.33e-19 90.1
Msa1232930 AT3G55730.1 48.077 104 50 3 14 116 56 156 2.52e-19 90.1
Msa1232930 AT5G14750.4 59.322 59 24 0 59 117 1 59 3.05e-19 84.7
Msa1232930 AT5G14750.2 59.322 59 24 0 59 117 1 59 3.05e-19 84.7
Msa1232930 AT4G32730.1 42.857 105 56 3 14 117 87 188 3.30e-19 91.3
Msa1232930 AT4G32730.5 42.857 105 56 3 14 117 87 188 3.43e-19 91.7
Msa1232930 AT4G32730.4 42.857 105 56 3 14 117 87 188 3.43e-19 91.7
Msa1232930 AT4G32730.3 42.857 105 56 3 14 117 87 188 3.43e-19 91.7
Msa1232930 AT4G32730.2 42.857 105 56 3 14 117 87 188 3.43e-19 91.7
Msa1232930 AT2G25230.1 43.269 104 52 4 10 112 25 122 7.00e-19 86.3
Msa1232930 AT3G50060.1 36.364 165 83 6 14 173 6 153 1.09e-18 87.0
Msa1232930 AT3G23250.2 59.322 59 24 0 59 117 1 59 1.99e-18 84.7
Msa1232930 AT4G37260.1 44.231 104 54 3 14 116 13 113 3.91e-18 85.5
Msa1232930 AT4G00540.2 41.284 109 59 3 12 117 101 207 1.17e-17 85.1
Msa1232930 AT4G00540.1 41.284 109 59 3 12 117 99 205 2.04e-17 84.7
Msa1232930 AT1G71030.2 50.000 74 37 0 52 125 5 78 2.24e-17 80.5
Msa1232930 AT2G23290.1 44.231 104 54 3 14 116 13 113 2.65e-17 83.2
Msa1232930 AT1G71030.1 50.000 74 37 0 52 125 19 92 2.96e-17 80.5
Msa1232930 AT5G40430.1 37.383 107 62 3 7 112 47 149 3.78e-17 81.6
Msa1232930 AT1G66380.2 50.602 83 40 1 8 90 4 85 6.38e-17 77.0
Msa1232930 AT4G33450.1 44.000 100 52 3 9 107 14 110 7.38e-17 80.5
Msa1232930 AT3G29020.2 38.679 106 61 3 13 117 66 168 1.20e-16 80.9
Msa1232930 AT3G29020.1 39.048 105 60 3 14 117 65 166 1.95e-16 79.0
Msa1232930 AT5G17800.1 36.207 116 72 2 1 116 80 193 2.67e-16 80.1
Msa1232930 AT2G02820.1 41.228 114 64 3 4 116 19 130 7.42e-16 80.1
Msa1232930 AT2G02820.3 42.000 100 56 2 17 116 33 130 9.26e-16 79.0
Msa1232930 AT2G02820.2 42.000 100 56 2 17 116 33 130 9.51e-16 80.1
Msa1232930 AT1G14350.2 41.000 100 57 1 17 116 28 125 3.30e-14 75.1
Msa1232930 AT1G14350.1 41.000 100 57 1 17 116 28 125 3.30e-14 75.1
Msa1232930 AT2G37630.1 39.796 98 56 2 14 109 4 100 2.21e-13 72.0
Msa1232930 AT1G14350.3 50.000 60 30 0 57 116 23 82 2.66e-11 65.9
Msa1232930 AT1G14350.4 50.000 60 30 0 57 116 23 82 2.66e-11 65.9

Find 83 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCAATGTCAAGGAAAT+TGG 0.105747 8_2:+9569473 None:intergenic
ACATTAGGGTTTGCATTTAA+AGG 0.217309 8_2:+9570050 None:intergenic
TGGTGAAAACATTTCATATT+TGG 0.227821 8_2:+9569972 None:intergenic
TGTCTACGTTTGTATCAATT+TGG 0.229657 8_2:+9569517 None:intergenic
CTTTGATAATTGACTAATTT+AGG 0.240485 8_2:+9569675 None:intergenic
TTAGATGGTAGTACTATTTC+AGG 0.269039 8_2:+9569879 None:intergenic
GACTAATTGAGGCACAATAT+TGG 0.273377 8_2:+9569266 None:intergenic
ATAGAACTCCACCGCATTCT+AGG 0.277206 8_2:-9570902 Msa1232930:CDS
GATGATGATGATTGGAGTTT+AGG 0.296975 8_2:+9569592 None:intergenic
GGGAGGTGAATATCATAAAA+TGG 0.304714 8_2:+9570104 None:intergenic
TTGAAGTTTAGCATCACATT+AGG 0.305458 8_2:+9570035 None:intergenic
ACTAATTGAGGCACAATATT+GGG 0.311757 8_2:+9569267 None:intergenic
TACTCTTAAAATTAACTGTT+TGG 0.328274 8_2:+9569079 None:intergenic
AAACTTCCACGTTTCAAATC+AGG 0.335974 8_2:+9570950 None:intergenic
GGCACCACTCCATTTAATAT+TGG 0.337426 8_2:-9569768 Msa1232930:CDS
ACCTCATTACACGTTCTTCC+TGG 0.343760 8_2:+9570194 None:intergenic
GATGTGTCACCAATATTAAA+TGG 0.364065 8_2:+9569759 None:intergenic
TGTTGTGTCATTGATGCAAT+TGG 0.383864 8_2:+9569330 None:intergenic
GGAGGTGAATATCATAAAAT+GGG 0.385428 8_2:+9570105 None:intergenic
TGATCACAATCCAAATCAAT+TGG 0.394468 8_2:-9569811 Msa1232930:CDS
CAAGGAAATTGGGACTATAA+TGG 0.395278 8_2:+9569484 None:intergenic
AATGACCATGTATCTTCATC+AGG 0.398481 8_2:+9569429 None:intergenic
CCTTGGAATCAAATGAATCT+AGG 0.399640 8_2:+9569208 None:intergenic
TTCTCAATGTCAAGGAAATT+GGG 0.403624 8_2:+9569474 None:intergenic
CATCAATGTAATTATCCAAT+TGG 0.405881 8_2:+9569133 None:intergenic
GAGACGAGTTTGAAAGGTAT+AGG 0.406775 8_2:+9569994 None:intergenic
TGAAGTTTAGCATCACATTA+GGG 0.421919 8_2:+9570036 None:intergenic
AAATATAGAAACTAACCAAT+TGG 0.421920 8_2:-9569148 Msa1232930:CDS
TTGTGAAGATACATGGTCAT+TGG 0.423976 8_2:-9569847 Msa1232930:CDS
CTTTGATCATTGACTAATTG+AGG 0.425630 8_2:+9569255 None:intergenic
ACTAAGAGCTTCATGTTCCT+TGG 0.426868 8_2:+9569191 None:intergenic
GTTTAGGATCACATGTTCCT+TGG 0.427075 8_2:+9569608 None:intergenic
TCACAAGAGGATGGATTAGA+TGG 0.432136 8_2:+9569864 None:intergenic
CCTAGATTCATTTGATTCCA+AGG 0.455369 8_2:-9569208 Msa1232930:CDS
TCATCAGGGAAAGGATTAGA+TGG 0.457767 8_2:+9569444 None:intergenic
AGTTCTGTTCCAAAACTTGC+TGG 0.464625 8_2:-9571174 Msa1232930:intron
ACTGCTGCATTAATGAACTT+TGG 0.470384 8_2:+9569730 None:intergenic
GTTGTGTCATTGATGCAATT+GGG 0.472147 8_2:+9569331 None:intergenic
CTGATCTTGATGATGATGAT+TGG 0.472843 8_2:+9569584 None:intergenic
CAAATTGCCAAGCACTTGCC+AGG 0.478813 8_2:-9570212 Msa1232930:CDS
TCAATAATCATTTCAATGCC+AGG 0.480419 8_2:-9569929 Msa1232930:CDS
CGTTCTTCCTGGCAAGTGCT+TGG 0.487836 8_2:+9570205 None:intergenic
ATAATTACATTGATGCCCTC+AGG 0.490476 8_2:-9569125 Msa1232930:CDS
CATCCTCTTGTGAAGATACA+TGG 0.491138 8_2:-9569854 Msa1232930:CDS
GAAAGAGTTGCAGATTAAGA+TGG 0.506273 8_2:-9570988 Msa1232930:CDS
ACTGTTTGGCTGCTTGATGA+TGG 0.506778 8_2:+9569093 None:intergenic
CTTATCGACATGATTGCTGC+TGG 0.517937 8_2:-9571197 Msa1232930:CDS
AATCTAGGATGCAACAATCA+TGG 0.523526 8_2:+9569223 None:intergenic
AGAAGGTCAACAGAGGACTA+TGG 0.528903 8_2:-9571260 Msa1232930:CDS
CGATTATTCATCTGATTCCA+AGG 0.530355 8_2:-9569625 Msa1232930:CDS
TGTCTACCACTGTACCAGTT+TGG 0.535360 8_2:+9569952 None:intergenic
AAAGGTATAGGTGATCTTGA+TGG 0.536116 8_2:+9570006 None:intergenic
TCATAAAATGGGGTGAAGGA+TGG 0.540027 8_2:+9570116 None:intergenic
CTTTCCCTGATGAAGATACA+TGG 0.545218 8_2:-9569434 Msa1232930:CDS
CTAAGACCTGATTTGAAACG+TGG 0.553388 8_2:-9570956 Msa1232930:CDS
TATTTGGAGACGAGTTTGAA+AGG 0.556145 8_2:+9569988 None:intergenic
TGCAACAATCATGGTCCTCA+AGG 0.560058 8_2:+9569232 None:intergenic
ATGGAACAATATCATCAGAA+AGG 0.564185 8_2:+9570135 None:intergenic
TCCACCGCATTCTAGGCAAT+AGG 0.565568 8_2:-9570895 Msa1232930:intron
ACCTCATCTCAAAATCTACA+AGG 0.569833 8_2:-9569549 Msa1232930:CDS
AATATCATAAAATGGGGTGA+AGG 0.572123 8_2:+9570112 None:intergenic
GTATTTGATTCTCAATGTCA+AGG 0.576272 8_2:+9569466 None:intergenic
CATGTATCTTCACAAGAGGA+TGG 0.579302 8_2:+9569855 None:intergenic
CATGTATCTTCATCAGGGAA+AGG 0.587035 8_2:+9569435 None:intergenic
ATTGACTAATTTAGGCACAA+TGG 0.588637 8_2:+9569683 None:intergenic
TATAGGTGATCTTGATGGTG+AGG 0.593802 8_2:+9570011 None:intergenic
GCCAGGAAGAACGTGTAATG+AGG 0.598215 8_2:-9570195 Msa1232930:CDS
TGCTACATGCATAATCCTCA+AGG 0.602722 8_2:+9569652 None:intergenic
CTCTTGCTGTAGCAAAGAGA+AGG 0.605264 8_2:-9571277 Msa1232930:CDS
TGACCATGTATCTTCACAAG+AGG 0.608320 8_2:+9569851 None:intergenic
ATGACCATGTATCTTCATCA+GGG 0.622631 8_2:+9569430 None:intergenic
TGTGTAGGTCTGCAGAGATG+TGG 0.626648 8_2:-9571010 Msa1232930:intron
AGTCAATTATCAAAGCCTTG+AGG 0.626698 8_2:-9569667 Msa1232930:CDS
ACCTATTGCCTAGAATGCGG+TGG 0.629249 8_2:+9570894 None:intergenic
GTCACCAATATTAAATGGAG+TGG 0.646540 8_2:+9569764 None:intergenic
GAGGTGAATATCATAAAATG+GGG 0.660266 8_2:+9570106 None:intergenic
AGTCAATGATCAAAGCCTTG+AGG 0.663412 8_2:-9569247 Msa1232930:CDS
TCAATGTCATGATCATCACT+TGG 0.687505 8_2:-9569301 Msa1232930:CDS
TGGAATCAGATGAATAATCG+AGG 0.688424 8_2:+9569628 None:intergenic
AGCAAAGAGAAGGTCAACAG+AGG 0.693727 8_2:-9571267 Msa1232930:CDS
TATACCTATTGCCTAGAATG+CGG 0.693771 8_2:+9570891 None:intergenic
ATGATGGCAATGAAAACCTG+AGG 0.700721 8_2:+9569109 None:intergenic
TGATGGCAATGAAAACCTGA+GGG 0.740418 8_2:+9569110 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATTAGTATATATAG+TGG + chr8_2:9569233-9569252 None:intergenic 10.0%
!! AAAAAAATTAGTATATATAG+TGG + chr8_2:9569233-9569252 None:intergenic 10.0%
!! TAATAAGGAAAAAAAAAGTA+TGG + chr8_2:9569305-9569324 None:intergenic 15.0%
!!! AAAAAAGAAAGTATTTATTG+AGG + chr8_2:9570011-9570030 None:intergenic 15.0%
!!! CAATAAATACTTTCTTTTTT+TGG - chr8_2:9570011-9570030 Msa1232930:CDS 15.0%
!! TAATAAGGAAAAAAAAAGTA+TGG + chr8_2:9569305-9569324 None:intergenic 15.0%
!!! AAAAAAGAAAGTATTTATTG+AGG + chr8_2:9570011-9570030 None:intergenic 15.0%
!!! CAATAAATACTTTCTTTTTT+TGG - chr8_2:9570011-9570030 Msa1232930:CDS 15.0%
!! AACAGATGAACAATATAATA+AGG + chr8_2:9569320-9569339 None:intergenic 20.0%
!! ATTGACATGAAAATAAACAT+TGG + chr8_2:9569526-9569545 None:intergenic 20.0%
!!! TGAACTTTGAGAATAATAAA+TGG + chr8_2:9569554-9569573 None:intergenic 20.0%
!! TATTATTCTCAAAGTTCAAA+AGG - chr8_2:9569556-9569575 Msa1232930:CDS 20.0%
!! CAAAATATACAAAGAAGTTT+AGG + chr8_2:9569785-9569804 None:intergenic 20.0%
!!! CTAAACTTCTTTGTATATTT+TGG - chr8_2:9569783-9569802 Msa1232930:CDS 20.0%
!! TTACACATATTAAAGATTAG+AGG + chr8_2:9569854-9569873 None:intergenic 20.0%
!!! TTAGAATGACACTTATTTTA+AGG - chr8_2:9569880-9569899 Msa1232930:CDS 20.0%
!!! TAGAATGACACTTATTTTAA+GGG - chr8_2:9569881-9569900 Msa1232930:CDS 20.0%
!! CAATACAAAAATTCTATCTT+GGG + chr8_2:9569944-9569963 None:intergenic 20.0%
!!! CAATCTTTTGAGAAATAAAT+TGG + chr8_2:9569976-9569995 None:intergenic 20.0%
!!! GGTATAATTGAATTTTGATT+GGG + chr8_2:9570465-9570484 None:intergenic 20.0%
!!! AGGTATAATTGAATTTTGAT+TGG + chr8_2:9570466-9570485 None:intergenic 20.0%
!!! ATTTGATTTTCCAATTGATT+TGG + chr8_2:9570564-9570583 None:intergenic 20.0%
!! GAAAATCAAATTTCAAAAAG+TGG - chr8_2:9570573-9570592 Msa1232930:intron 20.0%
!!! CTTTGATAATTGACTAATTT+AGG + chr8_2:9570690-9570709 None:intergenic 20.0%
!! AAATATAGAAACTAACCAAT+TGG - chr8_2:9571214-9571233 Msa1232930:CDS 20.0%
!! TACTCTTAAAATTAACTGTT+TGG + chr8_2:9571286-9571305 None:intergenic 20.0%
!! AACAGATGAACAATATAATA+AGG + chr8_2:9569320-9569339 None:intergenic 20.0%
!! ATTGACATGAAAATAAACAT+TGG + chr8_2:9569526-9569545 None:intergenic 20.0%
!!! TGAACTTTGAGAATAATAAA+TGG + chr8_2:9569554-9569573 None:intergenic 20.0%
!! TATTATTCTCAAAGTTCAAA+AGG - chr8_2:9569556-9569575 Msa1232930:CDS 20.0%
!! CAAAATATACAAAGAAGTTT+AGG + chr8_2:9569785-9569804 None:intergenic 20.0%
!!! CTAAACTTCTTTGTATATTT+TGG - chr8_2:9569783-9569802 Msa1232930:CDS 20.0%
!! TTACACATATTAAAGATTAG+AGG + chr8_2:9569854-9569873 None:intergenic 20.0%
!!! TTAGAATGACACTTATTTTA+AGG - chr8_2:9569880-9569899 Msa1232930:CDS 20.0%
!!! TAGAATGACACTTATTTTAA+GGG - chr8_2:9569881-9569900 Msa1232930:CDS 20.0%
!! CAATACAAAAATTCTATCTT+GGG + chr8_2:9569944-9569963 None:intergenic 20.0%
!!! CAATCTTTTGAGAAATAAAT+TGG + chr8_2:9569976-9569995 None:intergenic 20.0%
!!! GGTATAATTGAATTTTGATT+GGG + chr8_2:9570465-9570484 None:intergenic 20.0%
!!! AGGTATAATTGAATTTTGAT+TGG + chr8_2:9570466-9570485 None:intergenic 20.0%
!!! ATTTGATTTTCCAATTGATT+TGG + chr8_2:9570564-9570583 None:intergenic 20.0%
!! GAAAATCAAATTTCAAAAAG+TGG - chr8_2:9570573-9570592 Msa1232930:intron 20.0%
!!! CTTTGATAATTGACTAATTT+AGG + chr8_2:9570690-9570709 None:intergenic 20.0%
!! AAATATAGAAACTAACCAAT+TGG - chr8_2:9571214-9571233 Msa1232930:CDS 20.0%
!! TACTCTTAAAATTAACTGTT+TGG + chr8_2:9571286-9571305 None:intergenic 20.0%
!! AAGGAAAAAAAAAGTATGGA+CGG + chr8_2:9569301-9569320 None:intergenic 25.0%
! AAGAAAAAGAGCTATTGTAA+TGG + chr8_2:9569498-9569517 None:intergenic 25.0%
! TCACAAAAGTTGTCAAAAAA+TGG + chr8_2:9569692-9569711 None:intergenic 25.0%
!! ATTTGAACAATCCTTTTGTT+GGG + chr8_2:9569825-9569844 None:intergenic 25.0%
!! TATTTGAACAATCCTTTTGT+TGG + chr8_2:9569826-9569845 None:intergenic 25.0%
!!! AAATGTTAATTTGTGCCTTA+GGG - chr8_2:9569904-9569923 Msa1232930:CDS 25.0%
! CCAATACAAAAATTCTATCT+TGG + chr8_2:9569945-9569964 None:intergenic 25.0%
!! CCAAGATAGAATTTTTGTAT+TGG - chr8_2:9569942-9569961 Msa1232930:CDS 25.0%
!!! CACTTTCCGTTTTAAAATAA+GGG + chr8_2:9570076-9570095 None:intergenic 25.0%
!!! ACACTTTCCGTTTTAAAATA+AGG + chr8_2:9570077-9570096 None:intergenic 25.0%
! TGGTGAAAACATTTCATATT+TGG + chr8_2:9570393-9570412 None:intergenic 25.0%
!!! TAATTGAATTTTGATTGGGT+AGG + chr8_2:9570461-9570480 None:intergenic 25.0%
!!! GTTTCTATATTTTGATCTTG+TGG + chr8_2:9571206-9571225 None:intergenic 25.0%
! CATCAATGTAATTATCCAAT+TGG + chr8_2:9571232-9571251 None:intergenic 25.0%
!! AAGGAAAAAAAAAGTATGGA+CGG + chr8_2:9569301-9569320 None:intergenic 25.0%
! AAGAAAAAGAGCTATTGTAA+TGG + chr8_2:9569498-9569517 None:intergenic 25.0%
! TCACAAAAGTTGTCAAAAAA+TGG + chr8_2:9569692-9569711 None:intergenic 25.0%
!! ATTTGAACAATCCTTTTGTT+GGG + chr8_2:9569825-9569844 None:intergenic 25.0%
!! TATTTGAACAATCCTTTTGT+TGG + chr8_2:9569826-9569845 None:intergenic 25.0%
!!! AAATGTTAATTTGTGCCTTA+GGG - chr8_2:9569904-9569923 Msa1232930:CDS 25.0%
! CCAATACAAAAATTCTATCT+TGG + chr8_2:9569945-9569964 None:intergenic 25.0%
!! CCAAGATAGAATTTTTGTAT+TGG - chr8_2:9569942-9569961 Msa1232930:CDS 25.0%
!!! CACTTTCCGTTTTAAAATAA+GGG + chr8_2:9570076-9570095 None:intergenic 25.0%
!!! ACACTTTCCGTTTTAAAATA+AGG + chr8_2:9570077-9570096 None:intergenic 25.0%
! TGGTGAAAACATTTCATATT+TGG + chr8_2:9570393-9570412 None:intergenic 25.0%
!!! TAATTGAATTTTGATTGGGT+AGG + chr8_2:9570461-9570480 None:intergenic 25.0%
!!! GTTTCTATATTTTGATCTTG+TGG + chr8_2:9571206-9571225 None:intergenic 25.0%
! CATCAATGTAATTATCCAAT+TGG + chr8_2:9571232-9571251 None:intergenic 25.0%
! ATGAGTTTTTCATCTTCTTC+AGG + chr8_2:9569131-9569150 None:intergenic 30.0%
GTTTATATCATGATGTGTGT+AGG - chr8_2:9569337-9569356 Msa1232930:CDS 30.0%
! AAGGTTGATTATACTCTTTC+CGG - chr8_2:9569575-9569594 Msa1232930:CDS 30.0%
!!! AAGTGTCTCTCTTTTTCAAT+TGG - chr8_2:9569606-9569625 Msa1232930:CDS 30.0%
! GTTTTTACTTTCTCTCTCTA+TGG - chr8_2:9569739-9569758 Msa1232930:CDS 30.0%
!! GAAATGTTAATTTGTGCCTT+AGG - chr8_2:9569903-9569922 Msa1232930:CDS 30.0%
GTATATTAATATGTGCCCTA+AGG + chr8_2:9569922-9569941 None:intergenic 30.0%
!!! GCATGACCCTTATTTTAAAA+CGG - chr8_2:9570067-9570086 Msa1232930:CDS 30.0%
!! TATCCATTTTTCCTTTGACA+AGG - chr8_2:9570101-9570120 Msa1232930:CDS 30.0%
AAACCTTGTCAAAGGAAAAA+TGG + chr8_2:9570107-9570126 None:intergenic 30.0%
ACAAGTTTAAACCTTGTCAA+AGG + chr8_2:9570115-9570134 None:intergenic 30.0%
! TGACAAGGTTTAAACTTGTT+TGG - chr8_2:9570116-9570135 Msa1232930:CDS 30.0%
! TTTAAACTTGTTTGGACAGA+TGG - chr8_2:9570124-9570143 Msa1232930:CDS 30.0%
! GTAATGAGGTGAAAAACTTT+TGG - chr8_2:9570181-9570200 Msa1232930:CDS 30.0%
ATGGAACAATATCATCAGAA+AGG + chr8_2:9570230-9570249 None:intergenic 30.0%
AATATCATAAAATGGGGTGA+AGG + chr8_2:9570253-9570272 None:intergenic 30.0%
GAGGTGAATATCATAAAATG+GGG + chr8_2:9570259-9570278 None:intergenic 30.0%
GGAGGTGAATATCATAAAAT+GGG + chr8_2:9570260-9570279 None:intergenic 30.0%
ACATTAGGGTTTGCATTTAA+AGG + chr8_2:9570315-9570334 None:intergenic 30.0%
TGAAGTTTAGCATCACATTA+GGG + chr8_2:9570329-9570348 None:intergenic 30.0%
TTGAAGTTTAGCATCACATT+AGG + chr8_2:9570330-9570349 None:intergenic 30.0%
! ATGAAATGTTTTCACCAAAC+TGG - chr8_2:9570396-9570415 Msa1232930:intron 30.0%
TCAATAATCATTTCAATGCC+AGG - chr8_2:9570433-9570452 Msa1232930:intron 30.0%
TTAGATGGTAGTACTATTTC+AGG + chr8_2:9570486-9570505 None:intergenic 30.0%
TGATCACAATCCAAATCAAT+TGG - chr8_2:9570551-9570570 Msa1232930:intron 30.0%
GATGTGTCACCAATATTAAA+TGG + chr8_2:9570606-9570625 None:intergenic 30.0%
ATTGACTAATTTAGGCACAA+TGG + chr8_2:9570682-9570701 None:intergenic 30.0%
TGTCTACGTTTGTATCAATT+TGG + chr8_2:9570848-9570867 None:intergenic 30.0%
TTCTCAATGTCAAGGAAATT+GGG + chr8_2:9570891-9570910 None:intergenic 30.0%
ATTCTCAATGTCAAGGAAAT+TGG + chr8_2:9570892-9570911 None:intergenic 30.0%
GTATTTGATTCTCAATGTCA+AGG + chr8_2:9570899-9570918 None:intergenic 30.0%
!! GTTGACTAAATTGTTTTGCT+GGG + chr8_2:9571012-9571031 None:intergenic 30.0%
ACTAATTGAGGCACAATATT+GGG + chr8_2:9571098-9571117 None:intergenic 30.0%
! CTTTGATCATTGACTAATTG+AGG + chr8_2:9571110-9571129 None:intergenic 30.0%
! ATGAGTTTTTCATCTTCTTC+AGG + chr8_2:9569131-9569150 None:intergenic 30.0%
GTTTATATCATGATGTGTGT+AGG - chr8_2:9569337-9569356 Msa1232930:CDS 30.0%
! AAGGTTGATTATACTCTTTC+CGG - chr8_2:9569575-9569594 Msa1232930:CDS 30.0%
!!! AAGTGTCTCTCTTTTTCAAT+TGG - chr8_2:9569606-9569625 Msa1232930:CDS 30.0%
! GTTTTTACTTTCTCTCTCTA+TGG - chr8_2:9569739-9569758 Msa1232930:CDS 30.0%
!! GAAATGTTAATTTGTGCCTT+AGG - chr8_2:9569903-9569922 Msa1232930:CDS 30.0%
GTATATTAATATGTGCCCTA+AGG + chr8_2:9569922-9569941 None:intergenic 30.0%
!!! GCATGACCCTTATTTTAAAA+CGG - chr8_2:9570067-9570086 Msa1232930:CDS 30.0%
!! TATCCATTTTTCCTTTGACA+AGG - chr8_2:9570101-9570120 Msa1232930:CDS 30.0%
AAACCTTGTCAAAGGAAAAA+TGG + chr8_2:9570107-9570126 None:intergenic 30.0%
ACAAGTTTAAACCTTGTCAA+AGG + chr8_2:9570115-9570134 None:intergenic 30.0%
! TGACAAGGTTTAAACTTGTT+TGG - chr8_2:9570116-9570135 Msa1232930:CDS 30.0%
! TTTAAACTTGTTTGGACAGA+TGG - chr8_2:9570124-9570143 Msa1232930:CDS 30.0%
! GTAATGAGGTGAAAAACTTT+TGG - chr8_2:9570181-9570200 Msa1232930:CDS 30.0%
ATGGAACAATATCATCAGAA+AGG + chr8_2:9570230-9570249 None:intergenic 30.0%
AATATCATAAAATGGGGTGA+AGG + chr8_2:9570253-9570272 None:intergenic 30.0%
GAGGTGAATATCATAAAATG+GGG + chr8_2:9570259-9570278 None:intergenic 30.0%
GGAGGTGAATATCATAAAAT+GGG + chr8_2:9570260-9570279 None:intergenic 30.0%
ACATTAGGGTTTGCATTTAA+AGG + chr8_2:9570315-9570334 None:intergenic 30.0%
TGAAGTTTAGCATCACATTA+GGG + chr8_2:9570329-9570348 None:intergenic 30.0%
TTGAAGTTTAGCATCACATT+AGG + chr8_2:9570330-9570349 None:intergenic 30.0%
! ATGAAATGTTTTCACCAAAC+TGG - chr8_2:9570396-9570415 Msa1232930:intron 30.0%
TCAATAATCATTTCAATGCC+AGG - chr8_2:9570433-9570452 Msa1232930:intron 30.0%
TTAGATGGTAGTACTATTTC+AGG + chr8_2:9570486-9570505 None:intergenic 30.0%
TGATCACAATCCAAATCAAT+TGG - chr8_2:9570551-9570570 Msa1232930:intron 30.0%
GATGTGTCACCAATATTAAA+TGG + chr8_2:9570606-9570625 None:intergenic 30.0%
ATTGACTAATTTAGGCACAA+TGG + chr8_2:9570682-9570701 None:intergenic 30.0%
TGTCTACGTTTGTATCAATT+TGG + chr8_2:9570848-9570867 None:intergenic 30.0%
TTCTCAATGTCAAGGAAATT+GGG + chr8_2:9570891-9570910 None:intergenic 30.0%
ATTCTCAATGTCAAGGAAAT+TGG + chr8_2:9570892-9570911 None:intergenic 30.0%
GTATTTGATTCTCAATGTCA+AGG + chr8_2:9570899-9570918 None:intergenic 30.0%
!! GTTGACTAAATTGTTTTGCT+GGG + chr8_2:9571012-9571031 None:intergenic 30.0%
ACTAATTGAGGCACAATATT+GGG + chr8_2:9571098-9571117 None:intergenic 30.0%
! CTTTGATCATTGACTAATTG+AGG + chr8_2:9571110-9571129 None:intergenic 30.0%
! CTTTTAGTACCAGCAAGTTT+TGG + chr8_2:9569200-9569219 None:intergenic 35.0%
GAAAGAGTTGCAGATTAAGA+TGG - chr8_2:9569374-9569393 Msa1232930:CDS 35.0%
AAACTTCCACGTTTCAAATC+AGG + chr8_2:9569415-9569434 None:intergenic 35.0%
TATACCTATTGCCTAGAATG+CGG + chr8_2:9569474-9569493 None:intergenic 35.0%
! GAGAGACACTTATTTGAAAC+CGG + chr8_2:9569597-9569616 None:intergenic 35.0%
AAACTTTAACATGTGCCCTT+AGG - chr8_2:9570034-9570053 Msa1232930:CDS 35.0%
AACTTTAACATGTGCCCTTA+GGG - chr8_2:9570035-9570054 Msa1232930:CDS 35.0%
GGGAGGTGAATATCATAAAA+TGG + chr8_2:9570261-9570280 None:intergenic 35.0%
TCCTTAAAAACAGCGTTGTA+GGG + chr8_2:9570282-9570301 None:intergenic 35.0%
TTCCTTAAAAACAGCGTTGT+AGG + chr8_2:9570283-9570302 None:intergenic 35.0%
! AAAGGTATAGGTGATCTTGA+TGG + chr8_2:9570359-9570378 None:intergenic 35.0%
TATTTGGAGACGAGTTTGAA+AGG + chr8_2:9570377-9570396 None:intergenic 35.0%
TTGTGAAGATACATGGTCAT+TGG - chr8_2:9570515-9570534 Msa1232930:intron 35.0%
GTCACCAATATTAAATGGAG+TGG + chr8_2:9570601-9570620 None:intergenic 35.0%
ACTGCTGCATTAATGAACTT+TGG + chr8_2:9570635-9570654 None:intergenic 35.0%
AGTCAATTATCAAAGCCTTG+AGG - chr8_2:9570695-9570714 Msa1232930:intron 35.0%
TGGAATCAGATGAATAATCG+AGG + chr8_2:9570737-9570756 None:intergenic 35.0%
CGATTATTCATCTGATTCCA+AGG - chr8_2:9570737-9570756 Msa1232930:intron 35.0%
! GATGATGATGATTGGAGTTT+AGG + chr8_2:9570773-9570792 None:intergenic 35.0%
!! CTGATCTTGATGATGATGAT+TGG + chr8_2:9570781-9570800 None:intergenic 35.0%
!!! TGTAGATTTTGAGATGAGGT+TGG + chr8_2:9570813-9570832 None:intergenic 35.0%
ACCTCATCTCAAAATCTACA+AGG - chr8_2:9570813-9570832 Msa1232930:intron 35.0%
!!! TCCTTGTAGATTTTGAGATG+AGG + chr8_2:9570817-9570836 None:intergenic 35.0%
CAAGGAAATTGGGACTATAA+TGG + chr8_2:9570881-9570900 None:intergenic 35.0%
ATGACCATGTATCTTCATCA+GGG + chr8_2:9570935-9570954 None:intergenic 35.0%
AATGACCATGTATCTTCATC+AGG + chr8_2:9570936-9570955 None:intergenic 35.0%
!! GGTTGACTAAATTGTTTTGC+TGG + chr8_2:9571013-9571032 None:intergenic 35.0%
! GTTGTGTCATTGATGCAATT+GGG + chr8_2:9571034-9571053 None:intergenic 35.0%
! TGTTGTGTCATTGATGCAAT+TGG + chr8_2:9571035-9571054 None:intergenic 35.0%
TCAATGTCATGATCATCACT+TGG - chr8_2:9571061-9571080 Msa1232930:intron 35.0%
GACTAATTGAGGCACAATAT+TGG + chr8_2:9571099-9571118 None:intergenic 35.0%
! AATCTAGGATGCAACAATCA+TGG + chr8_2:9571142-9571161 None:intergenic 35.0%
CCTTGGAATCAAATGAATCT+AGG + chr8_2:9571157-9571176 None:intergenic 35.0%
CCTAGATTCATTTGATTCCA+AGG - chr8_2:9571154-9571173 Msa1232930:intron 35.0%
ATAATTACATTGATGCCCTC+AGG - chr8_2:9571237-9571256 Msa1232930:CDS 35.0%
! CTTTTAGTACCAGCAAGTTT+TGG + chr8_2:9569200-9569219 None:intergenic 35.0%
GAAAGAGTTGCAGATTAAGA+TGG - chr8_2:9569374-9569393 Msa1232930:CDS 35.0%
AAACTTCCACGTTTCAAATC+AGG + chr8_2:9569415-9569434 None:intergenic 35.0%
TATACCTATTGCCTAGAATG+CGG + chr8_2:9569474-9569493 None:intergenic 35.0%
! GAGAGACACTTATTTGAAAC+CGG + chr8_2:9569597-9569616 None:intergenic 35.0%
AAACTTTAACATGTGCCCTT+AGG - chr8_2:9570034-9570053 Msa1232930:CDS 35.0%
AACTTTAACATGTGCCCTTA+GGG - chr8_2:9570035-9570054 Msa1232930:CDS 35.0%
GGGAGGTGAATATCATAAAA+TGG + chr8_2:9570261-9570280 None:intergenic 35.0%
TCCTTAAAAACAGCGTTGTA+GGG + chr8_2:9570282-9570301 None:intergenic 35.0%
TTCCTTAAAAACAGCGTTGT+AGG + chr8_2:9570283-9570302 None:intergenic 35.0%
! AAAGGTATAGGTGATCTTGA+TGG + chr8_2:9570359-9570378 None:intergenic 35.0%
TATTTGGAGACGAGTTTGAA+AGG + chr8_2:9570377-9570396 None:intergenic 35.0%
TTGTGAAGATACATGGTCAT+TGG - chr8_2:9570515-9570534 Msa1232930:intron 35.0%
GTCACCAATATTAAATGGAG+TGG + chr8_2:9570601-9570620 None:intergenic 35.0%
ACTGCTGCATTAATGAACTT+TGG + chr8_2:9570635-9570654 None:intergenic 35.0%
AGTCAATTATCAAAGCCTTG+AGG - chr8_2:9570695-9570714 Msa1232930:intron 35.0%
TGGAATCAGATGAATAATCG+AGG + chr8_2:9570737-9570756 None:intergenic 35.0%
CGATTATTCATCTGATTCCA+AGG - chr8_2:9570737-9570756 Msa1232930:intron 35.0%
! GATGATGATGATTGGAGTTT+AGG + chr8_2:9570773-9570792 None:intergenic 35.0%
!! CTGATCTTGATGATGATGAT+TGG + chr8_2:9570781-9570800 None:intergenic 35.0%
!!! TGTAGATTTTGAGATGAGGT+TGG + chr8_2:9570813-9570832 None:intergenic 35.0%
ACCTCATCTCAAAATCTACA+AGG - chr8_2:9570813-9570832 Msa1232930:intron 35.0%
!!! TCCTTGTAGATTTTGAGATG+AGG + chr8_2:9570817-9570836 None:intergenic 35.0%
CAAGGAAATTGGGACTATAA+TGG + chr8_2:9570881-9570900 None:intergenic 35.0%
ATGACCATGTATCTTCATCA+GGG + chr8_2:9570935-9570954 None:intergenic 35.0%
AATGACCATGTATCTTCATC+AGG + chr8_2:9570936-9570955 None:intergenic 35.0%
!! GGTTGACTAAATTGTTTTGC+TGG + chr8_2:9571013-9571032 None:intergenic 35.0%
! GTTGTGTCATTGATGCAATT+GGG + chr8_2:9571034-9571053 None:intergenic 35.0%
! TGTTGTGTCATTGATGCAAT+TGG + chr8_2:9571035-9571054 None:intergenic 35.0%
TCAATGTCATGATCATCACT+TGG - chr8_2:9571061-9571080 Msa1232930:intron 35.0%
GACTAATTGAGGCACAATAT+TGG + chr8_2:9571099-9571118 None:intergenic 35.0%
! AATCTAGGATGCAACAATCA+TGG + chr8_2:9571142-9571161 None:intergenic 35.0%
CCTTGGAATCAAATGAATCT+AGG + chr8_2:9571157-9571176 None:intergenic 35.0%
CCTAGATTCATTTGATTCCA+AGG - chr8_2:9571154-9571173 Msa1232930:intron 35.0%
ATAATTACATTGATGCCCTC+AGG - chr8_2:9571237-9571256 Msa1232930:CDS 35.0%
AGTTCTGTTCCAAAACTTGC+TGG - chr8_2:9569188-9569207 Msa1232930:CDS 40.0%
! CTAAGACCTGATTTGAAACG+TGG - chr8_2:9569406-9569425 Msa1232930:CDS 40.0%
ACTTTCTCTCTCTATGGCTT+TGG - chr8_2:9569745-9569764 Msa1232930:CDS 40.0%
CAACAAGTTGTCCCAACAAA+AGG - chr8_2:9569811-9569830 Msa1232930:CDS 40.0%
TCATAAAATGGGGTGAAGGA+TGG + chr8_2:9570249-9570268 None:intergenic 40.0%
CCTTAAAAACAGCGTTGTAG+GGG + chr8_2:9570281-9570300 None:intergenic 40.0%
!! TATAGGTGATCTTGATGGTG+AGG + chr8_2:9570354-9570373 None:intergenic 40.0%
! GAGACGAGTTTGAAAGGTAT+AGG + chr8_2:9570371-9570390 None:intergenic 40.0%
! TTTTCACCAAACTGGTACAG+TGG - chr8_2:9570404-9570423 Msa1232930:intron 40.0%
!!! ATTTTGATTGGGTAGGAACC+TGG + chr8_2:9570454-9570473 None:intergenic 40.0%
!! TCACAAGAGGATGGATTAGA+TGG + chr8_2:9570501-9570520 None:intergenic 40.0%
CATGTATCTTCACAAGAGGA+TGG + chr8_2:9570510-9570529 None:intergenic 40.0%
CATCCTCTTGTGAAGATACA+TGG - chr8_2:9570508-9570527 Msa1232930:intron 40.0%
TGACCATGTATCTTCACAAG+AGG + chr8_2:9570514-9570533 None:intergenic 40.0%
GGCACCACTCCATTTAATAT+TGG - chr8_2:9570594-9570613 Msa1232930:intron 40.0%
TGCTACATGCATAATCCTCA+AGG + chr8_2:9570713-9570732 None:intergenic 40.0%
! GTTTAGGATCACATGTTCCT+TGG + chr8_2:9570757-9570776 None:intergenic 40.0%
!!! GATTTTGAGATGAGGTTGGA+AGG + chr8_2:9570809-9570828 None:intergenic 40.0%
TCATCAGGGAAAGGATTAGA+TGG + chr8_2:9570921-9570940 None:intergenic 40.0%
CATGTATCTTCATCAGGGAA+AGG + chr8_2:9570930-9570949 None:intergenic 40.0%
CTTTCCCTGATGAAGATACA+TGG - chr8_2:9570928-9570947 Msa1232930:CDS 40.0%
! TTTTGCTGGGTGGTATAACT+TGG + chr8_2:9570999-9571018 None:intergenic 40.0%
!! GACTAAATTGTTTTGCTGGG+TGG + chr8_2:9571009-9571028 None:intergenic 40.0%
AGTCAATGATCAAAGCCTTG+AGG - chr8_2:9571115-9571134 Msa1232930:intron 40.0%
ACTAAGAGCTTCATGTTCCT+TGG + chr8_2:9571174-9571193 None:intergenic 40.0%
TGATGGCAATGAAAACCTGA+GGG + chr8_2:9571255-9571274 None:intergenic 40.0%
ATGATGGCAATGAAAACCTG+AGG + chr8_2:9571256-9571275 None:intergenic 40.0%
AGTTCTGTTCCAAAACTTGC+TGG - chr8_2:9569188-9569207 Msa1232930:CDS 40.0%
! CTAAGACCTGATTTGAAACG+TGG - chr8_2:9569406-9569425 Msa1232930:CDS 40.0%
ACTTTCTCTCTCTATGGCTT+TGG - chr8_2:9569745-9569764 Msa1232930:CDS 40.0%
CAACAAGTTGTCCCAACAAA+AGG - chr8_2:9569811-9569830 Msa1232930:CDS 40.0%
TCATAAAATGGGGTGAAGGA+TGG + chr8_2:9570249-9570268 None:intergenic 40.0%
CCTTAAAAACAGCGTTGTAG+GGG + chr8_2:9570281-9570300 None:intergenic 40.0%
!! TATAGGTGATCTTGATGGTG+AGG + chr8_2:9570354-9570373 None:intergenic 40.0%
! GAGACGAGTTTGAAAGGTAT+AGG + chr8_2:9570371-9570390 None:intergenic 40.0%
! TTTTCACCAAACTGGTACAG+TGG - chr8_2:9570404-9570423 Msa1232930:intron 40.0%
!!! ATTTTGATTGGGTAGGAACC+TGG + chr8_2:9570454-9570473 None:intergenic 40.0%
!! TCACAAGAGGATGGATTAGA+TGG + chr8_2:9570501-9570520 None:intergenic 40.0%
CATGTATCTTCACAAGAGGA+TGG + chr8_2:9570510-9570529 None:intergenic 40.0%
CATCCTCTTGTGAAGATACA+TGG - chr8_2:9570508-9570527 Msa1232930:intron 40.0%
TGACCATGTATCTTCACAAG+AGG + chr8_2:9570514-9570533 None:intergenic 40.0%
GGCACCACTCCATTTAATAT+TGG - chr8_2:9570594-9570613 Msa1232930:intron 40.0%
TGCTACATGCATAATCCTCA+AGG + chr8_2:9570713-9570732 None:intergenic 40.0%
! GTTTAGGATCACATGTTCCT+TGG + chr8_2:9570757-9570776 None:intergenic 40.0%
!!! GATTTTGAGATGAGGTTGGA+AGG + chr8_2:9570809-9570828 None:intergenic 40.0%
TCATCAGGGAAAGGATTAGA+TGG + chr8_2:9570921-9570940 None:intergenic 40.0%
CATGTATCTTCATCAGGGAA+AGG + chr8_2:9570930-9570949 None:intergenic 40.0%
CTTTCCCTGATGAAGATACA+TGG - chr8_2:9570928-9570947 Msa1232930:CDS 40.0%
! TTTTGCTGGGTGGTATAACT+TGG + chr8_2:9570999-9571018 None:intergenic 40.0%
!! GACTAAATTGTTTTGCTGGG+TGG + chr8_2:9571009-9571028 None:intergenic 40.0%
AGTCAATGATCAAAGCCTTG+AGG - chr8_2:9571115-9571134 Msa1232930:intron 40.0%
ACTAAGAGCTTCATGTTCCT+TGG + chr8_2:9571174-9571193 None:intergenic 40.0%
TGATGGCAATGAAAACCTGA+GGG + chr8_2:9571255-9571274 None:intergenic 40.0%
ATGATGGCAATGAAAACCTG+AGG + chr8_2:9571256-9571275 None:intergenic 40.0%
! CTCTTGCTGTAGCAAAGAGA+AGG - chr8_2:9569085-9569104 Msa1232930:CDS 45.0%
AGCAAAGAGAAGGTCAACAG+AGG - chr8_2:9569095-9569114 Msa1232930:CDS 45.0%
AGAAGGTCAACAGAGGACTA+TGG - chr8_2:9569102-9569121 Msa1232930:CDS 45.0%
CTTATCGACATGATTGCTGC+TGG - chr8_2:9569165-9569184 Msa1232930:CDS 45.0%
ATAGAACTCCACCGCATTCT+AGG - chr8_2:9569460-9569479 Msa1232930:CDS 45.0%
CATGCTTACTTGTGCCCTAA+GGG + chr8_2:9570052-9570071 None:intergenic 45.0%
TCATGCTTACTTGTGCCCTA+AGG + chr8_2:9570053-9570072 None:intergenic 45.0%
ACCTCATTACACGTTCTTCC+TGG + chr8_2:9570171-9570190 None:intergenic 45.0%
TAAAAACAGCGTTGTAGGGG+AGG + chr8_2:9570278-9570297 None:intergenic 45.0%
!!! CCCCTACAACGCTGTTTTTA+AGG - chr8_2:9570278-9570297 Msa1232930:intron 45.0%
TGTCTACCACTGTACCAGTT+TGG + chr8_2:9570413-9570432 None:intergenic 45.0%
TGCAACAATCATGGTCCTCA+AGG + chr8_2:9571133-9571152 None:intergenic 45.0%
ACTGTTTGGCTGCTTGATGA+TGG + chr8_2:9571272-9571291 None:intergenic 45.0%
! CTCTTGCTGTAGCAAAGAGA+AGG - chr8_2:9569085-9569104 Msa1232930:CDS 45.0%
AGCAAAGAGAAGGTCAACAG+AGG - chr8_2:9569095-9569114 Msa1232930:CDS 45.0%
AGAAGGTCAACAGAGGACTA+TGG - chr8_2:9569102-9569121 Msa1232930:CDS 45.0%
CTTATCGACATGATTGCTGC+TGG - chr8_2:9569165-9569184 Msa1232930:CDS 45.0%
ATAGAACTCCACCGCATTCT+AGG - chr8_2:9569460-9569479 Msa1232930:CDS 45.0%
CATGCTTACTTGTGCCCTAA+GGG + chr8_2:9570052-9570071 None:intergenic 45.0%
TCATGCTTACTTGTGCCCTA+AGG + chr8_2:9570053-9570072 None:intergenic 45.0%
ACCTCATTACACGTTCTTCC+TGG + chr8_2:9570171-9570190 None:intergenic 45.0%
TAAAAACAGCGTTGTAGGGG+AGG + chr8_2:9570278-9570297 None:intergenic 45.0%
!!! CCCCTACAACGCTGTTTTTA+AGG - chr8_2:9570278-9570297 Msa1232930:intron 45.0%
TGTCTACCACTGTACCAGTT+TGG + chr8_2:9570413-9570432 None:intergenic 45.0%
TGCAACAATCATGGTCCTCA+AGG + chr8_2:9571133-9571152 None:intergenic 45.0%
ACTGTTTGGCTGCTTGATGA+TGG + chr8_2:9571272-9571291 None:intergenic 45.0%
!!! AATTTTTTTATATTTTTTTG+AGG - chr8_2:9569244-9569263 Msa1232930:CDS 5.0%
!!! AATTTTTTTATATTTTTTTG+AGG - chr8_2:9569244-9569263 Msa1232930:CDS 5.0%
TGTGTAGGTCTGCAGAGATG+TGG - chr8_2:9569352-9569371 Msa1232930:CDS 50.0%
TCCACCGCATTCTAGGCAAT+AGG - chr8_2:9569467-9569486 Msa1232930:CDS 50.0%
ACCTATTGCCTAGAATGCGG+TGG + chr8_2:9569471-9569490 None:intergenic 50.0%
CAAATTGCCAAGCACTTGCC+AGG - chr8_2:9570150-9570169 Msa1232930:CDS 50.0%
GCCAGGAAGAACGTGTAATG+AGG - chr8_2:9570167-9570186 Msa1232930:CDS 50.0%
TGTGTAGGTCTGCAGAGATG+TGG - chr8_2:9569352-9569371 Msa1232930:CDS 50.0%
TCCACCGCATTCTAGGCAAT+AGG - chr8_2:9569467-9569486 Msa1232930:CDS 50.0%
ACCTATTGCCTAGAATGCGG+TGG + chr8_2:9569471-9569490 None:intergenic 50.0%
CAAATTGCCAAGCACTTGCC+AGG - chr8_2:9570150-9570169 Msa1232930:CDS 50.0%
GCCAGGAAGAACGTGTAATG+AGG - chr8_2:9570167-9570186 Msa1232930:CDS 50.0%
CGTTCTTCCTGGCAAGTGCT+TGG + chr8_2:9570160-9570179 None:intergenic 55.0%
CGTTCTTCCTGGCAAGTGCT+TGG + chr8_2:9570160-9570179 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 9569074 9571310 9569074 ID=Msa1232930;Name=Msa1232930
chr8_2 mRNA 9569074 9571310 9569074 ID=Msa1232930-mRNA-1;Parent=Msa1232930;Name=Msa1232930-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|3|0|477
chr8_2 exon 9571175 9571310 9571175 ID=Msa1232930-mRNA-1:exon:3783;Parent=Msa1232930-mRNA-1
chr8_2 exon 9570896 9571025 9570896 ID=Msa1232930-mRNA-1:exon:3782;Parent=Msa1232930-mRNA-1
chr8_2 exon 9569074 9570241 9569074 ID=Msa1232930-mRNA-1:exon:3781;Parent=Msa1232930-mRNA-1
chr8_2 CDS 9571175 9571310 9571175 ID=Msa1232930-mRNA-1:cds;Parent=Msa1232930-mRNA-1
chr8_2 CDS 9570896 9571025 9570896 ID=Msa1232930-mRNA-1:cds;Parent=Msa1232930-mRNA-1
chr8_2 CDS 9569074 9570241 9569074 ID=Msa1232930-mRNA-1:cds;Parent=Msa1232930-mRNA-1
Gene Sequence

>Msa1232930

ATGGCACATCACTCTTGCTGTAGCAAAGAGAAGGTCAACAGAGGACTATGGTCACCTGAAGAAGATGAAAAACTCATCAAATACATCACAACTTATCGACATGATTGCTGCTGGAGTTCTGTTCCAAAACTTGCTGGTCTGCAGAGATGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATCTAAGACCTGATTTGAAACGTGGAAGTTTCTCTTATGAAGAAGTAGCACTCATCATAGAACTCCACCGCATTCTAGGCAATAGATGGACACAAATTGCCAAGCACTTGCCAGGAAGAACGTGTAATGAGGTGAAAAACTTTTGGAATTCAAGCATAACGAAAAAACTCCTTTCTGATGATATTGTTCCATCCTTCACCCCATTTTATGATATTCACCTCCCCTACAACGCTGTTTTTAAGGAAAGTTTTTTTCCTTTAAATGCAAACCCTAATGTGATGCTAAACTTCAATCCTCACCATCAAGATCACCTATACCTTTCAAACTCGTCTCCAAATATGAAATGTTTTCACCAAACTGGTACAGTGGTAGACATCAATAATCATTTCAATGCCAGGTTCCTACCCAATCAAAATTCAATTATACCTGAAATAGTACTACCATCTAATCCATCCTCTTGTGAAGATACATGGTCATTGGATTGTGTAGCTCTTGATCACAATCCAAATCAATTGGAAAATCAAATTTCAAAAAGTGGCACCACTCCATTTAATATTGGTGACACATCAATCAACCAAAGTTCATTAATGCAGCAGTATGATCAATATCATGATCATGAAGCCATTGTGCCTAAATTAGTCAATTATCAAAGCCTTGAGGATTATGCATGTAGCATCCTCGATTATTCATCTGATTCCAAGGAACATGTGATCCTAAACTCCAATCATCATCATCAAGATCAGTTCTACCTTCCAACCTCATCTCAAAATCTACAAGGAAATTTTTACCAAATTGATACAAACGTAGACATGATCAATAACCATTATAGTCCCAATTTCCTTGACATTGAGAATCAAATACCATCTAATCCTTTCCCTGATGAAGATACATGGTCATTAGATTGTGTAGCTCTTCATATCAATAGAAATAAAGAAAATCCAAGTTATACCACCCAGCAAAACAATTTAGTCAACCCAATTGCATCAATGACACAACAATATGATCAATGTCATGATCATCACTTGGTTGAAACTGAACCCAATATTGTGCCTCAATTAGTCAATGATCAAAGCCTTGAGGACCATGATTGTTGCATCCTAGATTCATTTGATTCCAAGGAACATGAAGCTCTTAGTATTATTTATCCACAAGATCAAAATATAGAAACTAACCAATTGGATAATTACATTGATGCCCTCAGGTTTTCATTGCCATCATCAAGCAGCCAAACAGTTAATTTTAAGAGTATGTAG
Protein sequence

>Msa1232930

MAHHSCCSKEKVNRGLWSPEEDEKLIKYITTYRHDCCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSYEEVALIIELHRILGNRWTQIAKHLPGRTCNEVKNFWNSSITKKLLSDDIVPSFTPFYDIHLPYNAVFKESFFPLNANPNVMLNFNPHHQDHLYLSNSSPNMKCFHQTGTVVDINNHFNARFLPNQNSIIPEIVLPSNPSSCEDTWSLDCVALDHNPNQLENQISKSGTTPFNIGDTSINQSSLMQQYDQYHDHEAIVPKLVNYQSLEDYACSILDYSSDSKEHVILNSNHHHQDQFYLPTSSQNLQGNFYQIDTNVDMINNHYSPNFLDIENQIPSNPFPDEDTWSLDCVALHINRNKENPSYTTQQNNLVNPIASMTQQYDQCHDHHLVETEPNIVPQLVNDQSLEDHDCCILDSFDSKEHEALSIIYPQDQNIETNQLDNYIDALRFSLPSSSSQTVNFKSM*