AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1233130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1233130 MtrunA17_Chr8g0342541 82.913 357 36 5 1 341 1 348 0.0 572
Msa1233130 MtrunA17_Chr8g0342521 81.844 358 38 6 1 341 1 348 0.0 555
Msa1233130 MtrunA17_Chr8g0342481 73.026 304 64 10 1 296 1 294 1.38e-139 401
Msa1233130 MtrunA17_Chr8g0342481 48.696 115 44 4 153 263 295 398 7.26e-19 87.0
Msa1233130 MtrunA17_Chr2g0330041 56.338 355 108 17 1 318 1 345 3.75e-102 306
Msa1233130 MtrunA17_Chr2g0309911 79.832 119 23 1 1 119 1 118 8.16e-68 215
Msa1233130 MtrunA17_Chr1g0193801 77.586 116 26 0 1 116 1 116 2.01e-66 214
Msa1233130 MtrunA17_Chr1g0193371 77.586 116 26 0 1 116 1 116 2.03e-66 213
Msa1233130 MtrunA17_Chr7g0270891 77.586 116 26 0 1 116 1 116 3.33e-66 213
Msa1233130 MtrunA17_Chr4g0058631 74.194 124 32 0 1 124 1 124 1.40e-65 211
Msa1233130 MtrunA17_Chr8g0387421 76.471 119 28 0 1 119 1 119 1.55e-65 209
Msa1233130 MtrunA17_Chr5g0397231 64.901 151 47 3 1 145 1 151 2.16e-64 207
Msa1233130 MtrunA17_Chr3g0117091 67.883 137 38 1 1 137 1 131 5.68e-64 206
Msa1233130 MtrunA17_Chr1g0211161 72.131 122 34 0 3 124 4 125 1.76e-63 201
Msa1233130 MtrunA17_Chr7g0271241 78.899 109 23 0 1 109 1 109 6.84e-62 202
Msa1233130 MtrunA17_Chr8g0342511 95.402 87 4 0 1 87 1 87 1.33e-58 184
Msa1233130 MtrunA17_Chr8g0342531 92.135 89 7 0 1 89 1 89 4.39e-57 182
Msa1233130 MtrunA17_Chr3g0088461 72.477 109 30 0 8 116 18 126 1.12e-56 187
Msa1233130 MtrunA17_Chr1g0203411 64.655 116 41 0 1 116 1 116 2.93e-55 182
Msa1233130 MtrunA17_Chr8g0385321 62.903 124 46 0 1 124 1 124 1.17e-54 181
Msa1233130 MtrunA17_Chr4g0032401 72.642 106 29 0 11 116 16 121 1.71e-54 181
Msa1233130 MtrunA17_Chr2g0328771 71.429 105 30 0 12 116 20 124 5.70e-54 179
Msa1233130 MtrunA17_Chr3g0115821 61.538 117 45 0 1 117 1 117 2.54e-53 179
Msa1233130 MtrunA17_Chr5g0410961 50.943 159 69 2 1 156 1 153 2.61e-53 179
Msa1233130 MtrunA17_Chr3g0131121 61.789 123 47 0 1 123 1 123 4.45e-53 176
Msa1233130 MtrunA17_Chr5g0435101 55.072 138 52 1 6 133 5 142 1.15e-52 173
Msa1233130 MtrunA17_Chr4g0037141 58.871 124 51 0 1 124 1 124 1.23e-52 175
Msa1233130 MtrunA17_Chr4g0039971 59.829 117 47 0 1 117 2 118 2.48e-51 174
Msa1233130 MtrunA17_Chr6g0453471 61.207 116 45 0 1 116 1 116 3.56e-51 173
Msa1233130 MtrunA17_Chr1g0203441 64.167 120 43 0 9 128 10 129 4.06e-51 171
Msa1233130 MtrunA17_Chr8g0342461 82.222 90 15 1 1 89 1 90 5.66e-51 166
Msa1233130 MtrunA17_Chr8g0342471 81.111 90 16 1 1 89 1 90 1.83e-50 164
Msa1233130 MtrunA17_Chr2g0323351 62.162 111 42 0 7 117 7 117 1.85e-50 168
Msa1233130 MtrunA17_Chr6g0452271 43.617 188 100 2 1 188 1 182 1.94e-50 171
Msa1233130 MtrunA17_Chr4g0057031 62.393 117 44 0 1 117 1 117 2.20e-50 169
Msa1233130 MtrunA17_Chr3g0110351 62.931 116 43 0 1 116 1 116 2.44e-50 170
Msa1233130 MtrunA17_Chr4g0042671 55.224 134 60 0 1 134 1 134 2.76e-50 172
Msa1233130 MtrunA17_Chr7g0274581 61.207 116 45 0 1 116 1 116 4.32e-50 166
Msa1233130 MtrunA17_Chr5g0434571 62.931 116 43 0 1 116 37 152 8.83e-50 170
Msa1233130 MtrunA17_Chr4g0048511 61.864 118 44 1 1 117 1 118 9.67e-50 169
Msa1233130 MtrunA17_Chr2g0281071 61.017 118 45 1 1 117 1 118 1.24e-49 169
Msa1233130 MtrunA17_Chr2g0323411 60.684 117 46 0 1 117 1 117 1.74e-49 168
Msa1233130 MtrunA17_Chr7g0217741 60.345 116 46 0 1 116 1 116 2.12e-49 167
Msa1233130 MtrunA17_Chr1g0151941 58.824 119 48 1 1 118 1 119 2.72e-49 165
Msa1233130 MtrunA17_Chr7g0228891 62.931 116 43 0 1 116 1 116 3.21e-49 166
Msa1233130 MtrunA17_Chr6g0470971 63.559 118 43 0 9 126 11 128 6.04e-49 165
Msa1233130 MtrunA17_Chr1g0187761 61.207 116 45 0 1 116 1 116 1.20e-48 164
Msa1233130 MtrunA17_Chr5g0395281 64.151 106 38 0 12 117 12 117 2.72e-48 164
Msa1233130 MtrunA17_Chr2g0311221 62.385 109 41 0 2 110 4 112 3.55e-48 165
Msa1233130 MtrunA17_Chr1g0194951 62.097 124 47 0 1 124 1 124 4.59e-48 166
Msa1233130 MtrunA17_Chr8g0349261 60.504 119 45 2 1 117 1 119 5.60e-48 163
Msa1233130 MtrunA17_Chr4g0068061 61.207 116 45 0 1 116 1 116 1.86e-47 163
Msa1233130 MtrunA17_Chr3g0103281 62.931 116 43 0 1 116 1 116 3.11e-47 162
Msa1233130 MtrunA17_Chr4g0070611 57.759 116 49 0 1 116 1 116 3.89e-47 161
Msa1233130 MtrunA17_Chr1g0167661 56.198 121 53 0 1 121 1 121 4.14e-47 160
Msa1233130 MtrunA17_Chr4g0022931 58.036 112 47 0 5 116 6 117 4.38e-47 160
Msa1233130 MtrunA17_Chr7g0261281 57.759 116 49 0 1 116 1 116 1.02e-46 159
Msa1233130 MtrunA17_Chr4g0070641 57.759 116 49 0 1 116 1 116 1.10e-46 156
Msa1233130 MtrunA17_Chr1g0167691 56.410 117 51 0 1 117 1 117 1.83e-46 158
Msa1233130 MtrunA17_Chr7g0275911 54.918 122 55 0 1 122 1 122 2.31e-46 158
Msa1233130 MtrunA17_Chr4g0022901 57.627 118 48 1 5 122 6 121 2.54e-46 158
Msa1233130 MtrunA17_Chr4g0044421 60.684 117 46 0 1 117 1 117 3.90e-46 155
Msa1233130 MtrunA17_Chr7g0217221 56.897 116 50 0 1 116 1 116 1.33e-45 156
Msa1233130 MtrunA17_Chr8g0346561 53.077 130 61 0 1 130 1 130 1.38e-45 157
Msa1233130 MtrunA17_Chr4g0022911 53.659 123 54 2 1 122 1 121 3.36e-44 153
Msa1233130 MtrunA17_Chr4g0028311 57.143 119 50 1 1 118 1 119 5.67e-44 154
Msa1233130 MtrunA17_Chr3g0121241 58.036 112 47 0 6 117 36 147 6.28e-44 153
Msa1233130 MtrunA17_Chr7g0264641 57.143 119 50 1 1 118 1 119 1.29e-43 151
Msa1233130 MtrunA17_Chr1g0152011 56.303 119 51 1 1 118 1 119 1.68e-43 153
Msa1233130 MtrunA17_Chr7g0228231 54.472 123 54 1 1 121 1 123 2.17e-43 149
Msa1233130 MtrunA17_Chr7g0269831 52.113 142 60 1 1 142 1 134 2.64e-43 152
Msa1233130 MtrunA17_Chr5g0400821 55.000 120 53 1 1 119 1 120 4.71e-43 150
Msa1233130 MtrunA17_Chr4g0060721 56.034 116 51 0 1 116 2 117 4.79e-43 151
Msa1233130 MtrunA17_Chr6g0450101 59.091 110 45 0 11 120 13 122 1.15e-42 147
Msa1233130 MtrunA17_Chr3g0135311 53.782 119 54 1 1 118 1 119 1.79e-42 150
Msa1233130 MtrunA17_Chr3g0092401 56.757 111 48 0 6 116 7 117 9.49e-42 147
Msa1233130 MtrunA17_Chr7g0254411 54.310 116 53 0 1 116 1 116 1.27e-41 148
Msa1233130 MtrunA17_Chr2g0327351 57.658 111 46 1 1 110 1 111 1.65e-41 147
Msa1233130 MtrunA17_Chr4g0054391 60.000 110 43 1 1 109 1 110 1.76e-41 146
Msa1233130 MtrunA17_Chr6g0453211 58.095 105 44 0 6 110 6 110 2.29e-41 147
Msa1233130 MtrunA17_Chr1g0209661 57.143 105 45 0 11 115 26 130 3.20e-41 146
Msa1233130 MtrunA17_Chr8g0343831 40.000 180 103 1 10 189 6 180 3.60e-41 144
Msa1233130 MtrunA17_Chr4g0022881 56.075 107 47 0 8 114 8 114 1.21e-40 142
Msa1233130 MtrunA17_Chr1g0194291 53.509 114 53 0 2 115 11 124 1.32e-40 143
Msa1233130 MtrunA17_Chr3g0099131 59.615 104 42 0 12 115 41 144 3.14e-40 148
Msa1233130 MtrunA17_Chr5g0417821 58.491 106 44 0 12 117 7 112 3.19e-40 143
Msa1233130 MtrunA17_Chr1g0186061 54.955 111 50 0 5 115 13 123 3.71e-40 142
Msa1233130 MtrunA17_Chr4g0055981 43.949 157 83 2 9 160 52 208 3.76e-40 141
Msa1233130 MtrunA17_Chr1g0168661 54.464 112 51 0 4 115 13 124 1.60e-39 140
Msa1233130 MtrunA17_Chr6g0487491 47.273 165 75 4 1 154 1 164 1.73e-39 140
Msa1233130 MtrunA17_Chr4g0072751 54.955 111 49 1 1 110 1 111 3.23e-39 142
Msa1233130 MtrunA17_Chr1g0154031 56.731 104 45 0 12 115 76 179 5.17e-39 142
Msa1233130 MtrunA17_Chr3g0080861 55.238 105 47 0 12 116 37 141 8.63e-39 144
Msa1233130 MtrunA17_Chr7g0240821 51.562 128 58 1 17 140 6 133 1.60e-38 137
Msa1233130 MtrunA17_Chr4g0042611 61.364 88 34 0 1 88 1 88 1.80e-38 132
Msa1233130 MtrunA17_Chr8g0354661 56.731 104 45 0 12 115 37 140 1.91e-38 143
Msa1233130 MtrunA17_Chr1g0194301 53.846 104 48 0 12 115 33 136 2.23e-38 137
Msa1233130 MtrunA17_Chr4g0022891 54.717 106 48 0 8 113 8 113 2.41e-38 136
Msa1233130 MtrunA17_Chr1g0180391 53.333 105 49 0 12 116 19 123 2.43e-37 134
Msa1233130 MtrunA17_Chr5g0434911 51.327 113 55 0 7 119 16 128 1.89e-36 132
Msa1233130 MtrunA17_Chr5g0434831 53.704 108 50 0 10 117 5 112 2.38e-36 130
Msa1233130 MtrunA17_Chr2g0322521 56.075 107 47 0 9 115 26 132 2.62e-36 135
Msa1233130 MtrunA17_Chr5g0434931 51.818 110 53 0 10 119 33 142 4.83e-36 132
Msa1233130 MtrunA17_Chr7g0220341 55.963 109 46 1 12 118 25 133 5.32e-36 131
Msa1233130 MtrunA17_Chr2g0327821 48.598 107 55 0 9 115 3 109 8.26e-35 127
Msa1233130 MtrunA17_Chr8g0360111 54.286 105 48 0 8 112 21 125 8.84e-35 128
Msa1233130 MtrunA17_Chr4g0068921 54.369 103 47 0 12 114 24 126 1.81e-34 125
Msa1233130 MtrunA17_Chr7g0228991 51.818 110 53 0 10 119 27 136 1.99e-34 127
Msa1233130 MtrunA17_Chr1g0192411 53.333 105 49 0 11 115 11 115 6.67e-34 129
Msa1233130 MtrunA17_Chr2g0293911 54.369 103 47 0 12 114 24 126 1.02e-33 127
Msa1233130 MtrunA17_Chr4g0030881 49.091 110 49 1 13 115 8 117 1.28e-33 124
Msa1233130 MtrunA17_Chr7g0247131 58.696 92 31 1 44 128 10 101 1.77e-33 124
Msa1233130 MtrunA17_Chr5g0434841 50.000 108 54 0 10 117 18 125 3.79e-33 125
Msa1233130 MtrunA17_Chr4g0013361 50.877 114 55 1 12 124 10 123 4.31e-33 124
Msa1233130 MtrunA17_Chr2g0323321 56.977 86 37 0 7 92 6 91 7.48e-33 118
Msa1233130 MtrunA17_Chr8g0334881 50.000 112 55 1 4 114 2 113 1.32e-32 123
Msa1233130 MtrunA17_Chr5g0440781 50.000 104 51 1 12 114 12 115 1.21e-31 117
Msa1233130 MtrunA17_Chr5g0440761 50.000 104 51 1 12 114 12 115 3.12e-31 118
Msa1233130 MtrunA17_Chr5g0441141 50.000 104 51 1 12 114 12 115 3.47e-31 119
Msa1233130 MtrunA17_Chr2g0294811 57.955 88 37 0 1 88 1 88 4.00e-30 111
Msa1233130 MtrunA17_Chr3g0099141 57.317 82 35 0 12 93 40 121 1.76e-29 110
Msa1233130 MtrunA17_Chr5g0395221 57.500 80 34 0 9 88 9 88 5.35e-29 107
Msa1233130 MtrunA17_Chr5g0429661 45.690 116 60 2 14 128 122 235 6.55e-29 114
Msa1233130 MtrunA17_Chr5g0441131 47.115 104 54 1 12 114 9 112 7.59e-29 110
Msa1233130 MtrunA17_Chr4g0008551 49.107 112 51 3 14 121 38 147 4.14e-28 112
Msa1233130 MtrunA17_Chr4g0053431 50.476 105 51 1 14 118 5 108 3.49e-27 107
Msa1233130 MtrunA17_Chr6g0454921 37.356 174 105 3 8 179 7 178 8.82e-27 105
Msa1233130 MtrunA17_Chr5g0401731 31.076 251 144 7 3 246 2 230 2.01e-26 107
Msa1233130 MtrunA17_Chr3g0133601 49.074 108 54 1 8 115 31 137 5.73e-26 103
Msa1233130 MtrunA17_Chr7g0238631 46.602 103 54 1 14 116 113 214 8.17e-26 108
Msa1233130 MtrunA17_Chr3g0139671 38.129 139 71 3 14 152 85 208 8.60e-26 108
Msa1233130 MtrunA17_Chr6g0480581 46.535 101 53 1 14 114 4 103 2.82e-25 102
Msa1233130 MtrunA17_Chr1g0157731 42.453 106 60 1 14 119 91 195 9.94e-25 105
Msa1233130 MtrunA17_Chr7g0228531 43.519 108 59 2 14 121 220 325 1.80e-24 103
Msa1233130 MtrunA17_Chr7g0229131 56.757 74 32 0 44 117 4 77 3.48e-24 97.4
Msa1233130 MtrunA17_Chr4g0042501 44.348 115 56 3 2 115 98 205 3.49e-24 102
Msa1233130 MtrunA17_Chr7g0229101 60.000 70 28 0 44 113 4 73 4.16e-24 98.2
Msa1233130 MtrunA17_Chr4g0058991 42.593 108 59 2 9 115 204 309 5.80e-24 102
Msa1233130 MtrunA17_Chr5g0417621 43.750 112 60 2 11 121 131 240 6.73e-24 101
Msa1233130 MtrunA17_Chr1g0177901 38.806 134 67 2 25 144 5 137 1.70e-23 96.7
Msa1233130 MtrunA17_Chr5g0434901 58.824 68 28 0 46 113 7 74 3.80e-23 92.8
Msa1233130 MtrunA17_Chr3g0125801 41.322 121 68 2 14 133 16 134 4.25e-23 97.4
Msa1233130 MtrunA17_Chr5g0437321 47.619 105 53 2 8 112 14 116 7.11e-23 96.7
Msa1233130 MtrunA17_Chr3g0117511 41.176 102 59 1 14 115 183 283 1.21e-22 98.2
Msa1233130 MtrunA17_Chr6g0460661 45.161 93 48 2 17 108 19 109 5.92e-22 90.9
Msa1233130 MtrunA17_Chr7g0228401 44.944 89 48 1 25 113 290 377 9.16e-22 95.9
Msa1233130 MtrunA17_Chr6g0453751 49.451 91 37 2 12 93 20 110 1.60e-21 89.0
Msa1233130 MtrunA17_Chr3g0093811 49.495 99 47 2 44 140 14 111 2.94e-21 91.7
Msa1233130 MtrunA17_Chr5g0425591 46.988 83 43 1 13 94 10 92 9.93e-21 85.5
Msa1233130 MtrunA17_Chr7g0228481 42.157 102 57 2 12 113 218 317 1.11e-20 92.4
Msa1233130 MtrunA17_Chr7g0254261 39.130 115 64 2 1 115 81 189 1.91e-20 90.9
Msa1233130 MtrunA17_Chr5g0397841 43.878 98 53 2 12 109 109 204 2.41e-20 91.7
Msa1233130 MtrunA17_Chr6g0460671 41.176 102 59 1 14 115 99 199 6.48e-20 89.4
Msa1233130 MtrunA17_Chr5g0416341 38.261 115 64 3 17 126 29 141 2.61e-17 82.8
Msa1233130 MtrunA17_Chr7g0233061 36.792 106 62 3 14 119 180 280 2.73e-17 82.0
Msa1233130 MtrunA17_Chr7g0238651 38.776 98 58 1 14 109 7 104 1.41e-16 79.7
Msa1233130 MtrunA17_Chr1g0193901 51.471 68 33 0 1 68 1 68 4.48e-16 73.6
Msa1233130 MtrunA17_Chr1g0193891 51.471 68 33 0 1 68 1 68 4.48e-16 73.6
Msa1233130 MtrunA17_Chr1g0193871 51.471 68 33 0 1 68 1 68 4.48e-16 73.6
Msa1233130 MtrunA17_Chr1g0193881 51.471 68 33 0 1 68 1 68 4.48e-16 73.6
Msa1233130 MtrunA17_Chr8g0362231 38.000 100 59 2 17 115 25 122 6.84e-16 78.2
Msa1233130 MtrunA17_Chr3g0104491 38.806 67 37 1 53 115 1 67 2.62e-12 66.6
Msa1233130 MtrunA17_Chr5g0434871 55.556 45 20 0 74 118 2 46 7.79e-12 60.5
Msa1233130 MtrunA17_Chr5g0434891 35.000 140 62 7 77 198 1 129 5.02e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1233130 AT3G13890.2 90.678 118 11 0 1 118 1 118 2.72e-77 241
Msa1233130 AT3G13890.1 84.252 127 11 1 1 118 1 127 4.47e-74 233
Msa1233130 AT4G01680.3 78.448 116 25 0 1 116 1 116 3.54e-67 211
Msa1233130 AT3G12720.1 77.419 124 27 1 1 124 12 134 3.75e-67 213
Msa1233130 AT1G63910.1 79.310 116 24 0 1 116 1 116 7.22e-67 215
Msa1233130 AT4G01680.1 78.448 116 25 0 1 116 1 116 2.15e-66 213
Msa1233130 AT1G09540.1 68.794 141 37 1 1 134 1 141 2.73e-66 213
Msa1233130 AT1G57560.1 66.434 143 42 1 1 143 1 137 4.98e-66 211
Msa1233130 AT5G26660.1 78.448 116 25 0 1 116 1 116 6.72e-66 212
Msa1233130 AT1G57560.2 76.923 117 27 0 1 117 1 117 1.64e-65 208
Msa1233130 AT4G01680.2 71.094 128 25 1 1 116 1 128 6.80e-63 204
Msa1233130 AT3G08500.1 70.085 117 32 1 3 116 18 134 2.44e-55 184
Msa1233130 AT5G12870.1 73.832 107 28 0 10 116 16 122 2.71e-55 182
Msa1233130 AT2G16720.1 60.484 124 49 0 1 124 1 124 1.21e-54 180
Msa1233130 AT4G09460.1 50.932 161 71 1 1 153 1 161 6.97e-54 177
Msa1233130 AT4G12350.1 62.097 124 47 0 1 124 1 124 8.24e-53 176
Msa1233130 AT3G61250.1 57.576 132 49 1 1 125 1 132 1.27e-52 176
Msa1233130 AT4G34990.1 59.677 124 50 0 1 124 1 124 1.72e-52 175
Msa1233130 AT4G38620.1 58.065 124 52 0 1 124 1 124 2.37e-52 174
Msa1233130 AT1G22640.1 59.350 123 50 0 1 123 1 123 3.22e-52 173
Msa1233130 AT3G01140.2 61.538 117 45 0 1 117 1 117 3.56e-52 176
Msa1233130 AT3G02940.2 59.829 117 47 0 1 117 1 117 4.47e-52 175
Msa1233130 AT3G02940.1 59.829 117 47 0 1 117 1 117 9.17e-52 174
Msa1233130 AT3G02940.3 59.829 117 47 0 1 117 1 117 9.17e-52 174
Msa1233130 AT4G22680.1 64.103 117 42 0 1 117 1 117 1.01e-51 172
Msa1233130 AT5G15310.4 53.846 143 65 1 1 143 1 142 2.16e-51 171
Msa1233130 AT4G05100.1 61.017 118 45 1 1 117 1 118 3.00e-51 173
Msa1233130 AT5G15310.1 53.846 143 65 1 1 143 1 142 3.33e-51 173
Msa1233130 AT5G15310.2 53.846 143 65 1 1 143 1 142 4.26e-51 172
Msa1233130 AT4G21440.1 60.684 117 46 0 1 117 1 117 4.85e-51 173
Msa1233130 AT1G34670.1 61.538 117 45 0 1 117 1 117 5.04e-51 174
Msa1233130 AT1G79180.1 41.048 229 115 4 2 221 4 221 1.95e-50 170
Msa1233130 AT5G54230.1 64.103 117 42 0 1 117 1 117 2.06e-50 171
Msa1233130 AT5G16770.4 47.093 172 88 1 1 172 1 169 2.30e-50 171
Msa1233130 AT5G16770.3 47.093 172 88 1 1 172 1 169 2.30e-50 171
Msa1233130 AT3G01140.1 62.500 112 42 0 6 117 49 160 3.13e-50 172
Msa1233130 AT4G28110.1 58.974 117 48 0 1 117 1 117 3.45e-50 169
Msa1233130 AT5G16770.1 47.093 172 88 1 1 172 1 169 4.52e-50 170
Msa1233130 AT5G16770.2 47.093 172 88 1 1 172 1 169 4.52e-50 170
Msa1233130 AT2G31180.1 62.931 116 43 0 1 116 1 116 4.72e-50 167
Msa1233130 AT4G17785.2 61.864 118 44 1 1 117 1 118 5.86e-50 170
Msa1233130 AT4G17785.1 61.864 118 44 1 1 117 1 118 6.13e-50 171
Msa1233130 AT5G65230.1 60.684 117 46 0 1 117 1 117 7.46e-50 169
Msa1233130 AT1G66230.1 62.069 116 44 0 1 116 1 116 1.16e-49 167
Msa1233130 AT5G49330.1 56.522 138 51 1 1 138 1 129 2.32e-49 169
Msa1233130 AT1G35515.1 57.724 123 52 0 1 123 1 123 4.24e-49 164
Msa1233130 AT5G16600.1 62.931 116 43 0 1 116 1 116 5.46e-49 167
Msa1233130 AT5G10280.1 57.265 117 50 0 1 117 1 117 1.88e-48 166
Msa1233130 AT3G48920.1 61.468 109 42 0 8 116 14 122 2.23e-48 164
Msa1233130 AT5G56110.1 62.931 116 43 0 1 116 1 116 2.90e-48 165
Msa1233130 AT3G23250.1 57.759 116 49 0 1 116 1 116 2.93e-48 164
Msa1233130 AT1G56160.1 61.739 115 44 0 2 116 4 118 6.15e-48 164
Msa1233130 AT1G16490.1 59.504 121 49 0 2 122 4 124 9.38e-48 162
Msa1233130 AT5G60890.1 51.079 139 62 2 1 139 1 133 1.05e-47 163
Msa1233130 AT5G52260.1 65.138 109 38 0 9 117 9 117 1.25e-47 162
Msa1233130 AT2G47460.1 57.937 126 53 0 1 126 1 126 2.66e-47 164
Msa1233130 AT5G14340.1 62.069 116 44 0 1 116 13 128 2.71e-47 161
Msa1233130 AT5G23000.1 60.169 118 46 1 1 117 1 118 1.02e-46 161
Msa1233130 AT1G06180.1 59.483 116 47 0 1 116 1 116 1.19e-46 159
Msa1233130 AT3G28470.1 61.818 110 42 0 1 110 1 110 2.93e-46 160
Msa1233130 AT5G07690.1 54.701 117 53 0 1 117 1 117 1.42e-45 159
Msa1233130 AT3G13540.1 49.296 142 69 1 6 144 17 158 1.64e-45 155
Msa1233130 AT4G25560.1 61.062 113 44 0 10 122 8 120 1.78e-45 157
Msa1233130 AT5G61420.2 53.846 117 54 0 1 117 1 117 2.40e-45 159
Msa1233130 AT3G62610.1 57.759 116 49 0 1 116 1 116 4.91e-45 157
Msa1233130 AT5G07700.1 54.701 117 53 0 1 117 1 117 1.06e-44 156
Msa1233130 AT5G07700.2 54.701 117 53 0 1 117 1 117 1.06e-44 156
Msa1233130 AT1G18570.1 51.128 133 57 2 6 130 6 138 1.16e-44 156
Msa1233130 AT5G62320.1 52.846 123 51 1 2 117 3 125 2.37e-44 152
Msa1233130 AT3G12820.1 57.895 114 48 0 6 119 8 121 2.59e-44 152
Msa1233130 AT3G47600.1 56.897 116 50 0 1 116 1 116 2.97e-44 155
Msa1233130 AT5G57620.1 55.833 120 52 1 1 119 1 120 3.10e-44 155
Msa1233130 AT1G79180.2 35.496 262 116 5 2 221 4 254 1.15e-43 153
Msa1233130 AT5G62470.2 57.759 116 49 0 1 116 1 116 1.34e-43 154
Msa1233130 AT1G74650.1 56.410 117 51 0 1 117 1 117 1.44e-43 153
Msa1233130 AT1G74430.1 56.034 116 51 0 1 116 1 116 1.46e-43 151
Msa1233130 AT3G27810.1 37.387 222 121 6 9 228 17 222 3.33e-43 149
Msa1233130 AT1G74080.1 56.250 112 49 0 6 117 6 117 3.70e-43 152
Msa1233130 AT5G65790.1 55.932 118 51 1 1 117 1 118 7.10e-43 152
Msa1233130 AT3G49690.1 55.085 118 52 1 1 117 1 118 7.10e-43 150
Msa1233130 AT5G35550.1 59.259 108 44 0 9 116 11 118 7.21e-43 149
Msa1233130 AT5G40350.1 58.879 107 44 0 11 117 16 122 7.57e-43 148
Msa1233130 AT3G01530.1 59.223 103 42 0 12 114 25 127 1.22e-42 147
Msa1233130 AT5G40330.1 50.820 122 60 0 13 134 13 134 1.67e-42 147
Msa1233130 AT1G08810.1 54.167 120 55 0 1 120 1 120 1.78e-42 149
Msa1233130 AT5G14750.1 56.481 108 47 0 13 120 17 124 2.09e-42 146
Msa1233130 AT5G52600.1 54.688 128 53 1 8 130 8 135 2.52e-42 146
Msa1233130 AT2G36890.1 54.622 119 53 1 1 118 1 119 2.69e-42 149
Msa1233130 AT4G37780.1 54.622 119 53 1 1 118 1 119 3.52e-42 149
Msa1233130 AT2G36890.2 54.622 119 53 1 1 118 42 160 3.99e-42 149
Msa1233130 AT5G62470.1 57.759 116 48 1 1 116 1 115 8.21e-42 149
Msa1233130 AT3G27920.1 49.600 125 63 0 10 134 12 136 1.11e-41 145
Msa1233130 AT3G28910.1 57.658 111 47 0 6 116 6 116 1.67e-41 147
Msa1233130 AT1G48000.1 56.250 112 47 1 11 120 31 142 2.55e-41 145
Msa1233130 AT1G18710.1 52.381 126 59 1 1 126 1 125 1.51e-40 143
Msa1233130 AT5G06100.1 59.615 104 42 0 12 115 32 135 1.52e-40 148
Msa1233130 AT3G11440.2 54.386 114 52 0 2 115 31 144 2.18e-40 148
Msa1233130 AT5G06100.5 59.615 104 42 0 12 115 32 135 5.24e-40 147
Msa1233130 AT5G06100.2 59.615 104 42 0 12 115 32 135 5.24e-40 147
Msa1233130 AT5G06100.3 59.615 104 42 0 12 115 32 135 5.24e-40 147
Msa1233130 AT5G06100.4 59.615 104 42 0 12 115 32 135 5.24e-40 147
Msa1233130 AT3G11440.3 54.386 114 52 0 2 115 31 144 8.50e-40 147
Msa1233130 AT3G11440.4 54.386 114 52 0 2 115 31 144 8.50e-40 147
Msa1233130 AT3G11440.1 54.386 114 52 0 2 115 31 144 8.50e-40 147
Msa1233130 AT3G30210.1 57.843 102 43 0 13 114 28 129 7.70e-39 139
Msa1233130 AT4G13480.1 59.223 103 42 0 13 115 7 109 1.31e-38 138
Msa1233130 AT3G24310.1 56.881 109 47 0 13 121 19 127 1.55e-38 138
Msa1233130 AT2G26960.1 53.774 106 49 0 9 114 17 122 1.93e-38 142
Msa1233130 AT4G26930.1 56.311 103 45 0 12 114 19 121 2.02e-38 141
Msa1233130 AT1G68320.1 54.717 106 48 0 10 115 17 122 3.07e-38 138
Msa1233130 AT5G55020.1 56.311 103 45 0 12 114 26 128 3.03e-37 140
Msa1233130 AT2G32460.1 52.830 106 50 0 10 115 16 121 4.82e-37 139
Msa1233130 AT2G32460.2 52.830 106 50 0 10 115 4 109 4.98e-37 139
Msa1233130 AT1G25340.1 53.398 103 48 0 13 115 19 121 1.73e-36 133
Msa1233130 AT2G47190.1 48.077 104 54 0 12 115 20 123 2.16e-36 132
Msa1233130 AT5G26660.2 79.167 72 15 0 45 116 14 85 2.72e-36 134
Msa1233130 AT3G06490.1 59.223 103 42 0 12 114 19 121 2.99e-36 134
Msa1233130 AT1G66370.1 42.953 149 82 1 10 158 6 151 2.26e-35 129
Msa1233130 AT3G53200.1 51.402 107 52 0 9 115 6 112 4.11e-35 128
Msa1233130 AT5G49620.1 56.311 103 45 0 12 114 26 128 4.20e-34 127
Msa1233130 AT3G60460.1 53.211 109 50 1 7 114 6 114 6.95e-34 127
Msa1233130 AT5G59780.3 49.533 107 54 0 9 115 5 111 9.17e-34 125
Msa1233130 AT3G46130.1 50.485 103 51 0 13 115 10 112 4.09e-33 124
Msa1233130 AT2G26950.1 43.590 117 64 1 9 125 13 127 4.57e-32 124
Msa1233130 AT3G27810.2 36.170 188 102 6 43 228 2 173 5.93e-32 118
Msa1233130 AT1G25340.2 50.485 103 46 1 13 115 19 116 1.30e-31 120
Msa1233130 AT1G66380.1 54.717 106 48 0 10 115 6 111 1.64e-31 115
Msa1233130 AT1G25340.3 50.485 103 46 1 13 115 19 116 2.35e-31 120
Msa1233130 AT1G56650.1 53.774 106 49 0 10 115 6 111 1.30e-30 117
Msa1233130 AT5G40350.2 64.384 73 26 0 45 117 5 77 1.46e-30 114
Msa1233130 AT5G49620.2 49.573 117 45 1 12 114 26 142 1.84e-30 118
Msa1233130 AT1G66390.1 53.774 106 49 0 10 115 6 111 2.66e-30 116
Msa1233130 AT5G35550.2 66.667 72 24 0 45 116 50 121 2.00e-29 114
Msa1233130 AT5G14750.3 63.014 73 27 0 48 120 18 90 4.18e-29 110
Msa1233130 AT5G40360.1 39.333 150 79 6 9 156 153 292 5.54e-28 112
Msa1233130 AT3G27785.1 43.519 108 58 2 9 115 184 289 3.97e-27 111
Msa1233130 AT1G69560.1 38.365 159 79 5 2 158 98 239 6.76e-27 108
Msa1233130 AT3G47600.2 51.613 93 41 1 24 116 22 110 7.26e-27 108
Msa1233130 AT3G12820.2 59.722 72 29 0 48 119 2 73 7.30e-27 105
Msa1233130 AT1G69560.2 38.365 159 79 5 2 158 114 255 7.97e-27 108
Msa1233130 AT3G46130.3 61.111 72 28 0 44 115 9 80 1.49e-26 105
Msa1233130 AT5G59780.2 61.972 71 27 0 45 115 20 90 2.60e-26 104
Msa1233130 AT5G11050.1 46.602 103 52 2 14 115 105 205 3.54e-26 108
Msa1233130 AT4G18770.1 43.519 108 60 1 9 116 212 318 3.79e-26 108
Msa1233130 AT3G46130.4 61.972 71 27 0 45 115 20 90 4.22e-26 104
Msa1233130 AT5G67300.1 48.598 107 54 1 14 120 6 111 4.77e-26 105
Msa1233130 AT5G58850.1 45.631 103 53 2 14 115 105 205 6.92e-26 107
Msa1233130 AT3G53200.2 59.155 71 29 0 45 115 9 79 1.33e-25 102
Msa1233130 AT2G39880.1 44.800 125 65 3 8 131 45 166 1.81e-25 105
Msa1233130 AT5G11510.3 42.453 106 60 1 14 119 81 185 2.25e-25 107
Msa1233130 AT5G11510.1 42.453 106 60 1 14 119 81 185 2.25e-25 107
Msa1233130 AT5G11510.4 42.453 106 60 1 14 119 81 185 2.25e-25 107
Msa1233130 AT5G11510.5 42.453 106 60 1 14 119 81 185 3.19e-25 107
Msa1233130 AT5G11510.2 42.453 106 60 1 14 119 81 185 3.31e-25 107
Msa1233130 AT5G02320.1 30.702 228 128 6 14 234 127 331 4.12e-25 106
Msa1233130 AT5G02320.2 30.702 228 128 6 14 234 127 331 4.12e-25 106
Msa1233130 AT5G02320.3 31.429 210 118 5 14 216 67 257 4.20e-25 105
Msa1233130 AT3G55730.1 50.926 108 49 3 9 115 52 156 7.76e-25 104
Msa1233130 AT3G09370.2 46.078 102 54 1 14 115 135 235 1.86e-24 104
Msa1233130 AT3G09370.1 46.078 102 54 1 14 115 130 230 2.09e-24 103
Msa1233130 AT3G50060.1 50.000 102 50 1 14 115 6 106 2.14e-24 101
Msa1233130 AT3G09230.1 41.860 129 73 2 1 129 43 169 2.78e-24 102
Msa1233130 AT3G09370.3 46.078 102 54 1 14 115 143 243 2.94e-24 103
Msa1233130 AT4G37260.1 46.296 108 56 2 8 115 8 113 8.70e-24 100
Msa1233130 AT4G32730.5 41.509 106 61 1 14 119 87 191 1.07e-23 102
Msa1233130 AT4G32730.4 41.509 106 61 1 14 119 87 191 1.07e-23 102
Msa1233130 AT4G32730.3 41.509 106 61 1 14 119 87 191 1.07e-23 102
Msa1233130 AT4G32730.2 41.509 106 61 1 14 119 87 191 1.07e-23 102
Msa1233130 AT4G32730.1 41.509 106 61 1 14 119 87 191 1.08e-23 102
Msa1233130 AT1G26780.1 43.119 109 59 2 12 119 96 202 1.39e-23 98.6
Msa1233130 AT1G26780.2 43.119 109 59 2 12 119 96 202 2.06e-23 99.8
Msa1233130 AT1G17950.1 31.148 244 132 8 14 225 5 244 4.33e-23 96.7
Msa1233130 AT1G66380.3 58.442 77 32 0 39 115 2 78 1.30e-22 91.3
Msa1233130 AT1G22640.3 62.903 62 23 0 58 119 1 62 1.39e-22 94.0
Msa1233130 AT1G18960.1 38.547 179 95 8 5 177 4 173 2.07e-22 95.9
Msa1233130 AT2G23290.1 47.059 102 53 1 14 115 13 113 2.68e-22 95.9
Msa1233130 AT1G73410.1 45.631 103 53 2 14 115 6 106 4.46e-22 94.0
Msa1233130 AT1G73410.2 45.631 103 53 2 14 115 6 106 9.36e-22 92.0
Msa1233130 AT4G33450.1 37.500 128 78 2 2 128 6 132 2.30e-21 92.0
Msa1233130 AT5G17800.1 37.931 116 71 1 1 116 80 194 2.66e-21 93.2
Msa1233130 AT2G25230.1 40.404 99 56 2 17 114 29 125 2.87e-21 91.3
Msa1233130 AT3G29020.1 39.806 103 61 1 14 116 65 166 4.91e-20 87.8
Msa1233130 AT5G14750.4 59.322 59 24 0 58 116 1 59 5.44e-20 85.5
Msa1233130 AT5G14750.2 59.322 59 24 0 58 116 1 59 5.44e-20 85.5
Msa1233130 AT3G29020.2 39.806 103 61 1 14 116 67 168 5.61e-20 89.4
Msa1233130 AT1G66380.2 51.220 82 40 0 8 89 4 85 8.03e-20 84.0
Msa1233130 AT2G02820.3 42.424 99 56 1 17 115 33 130 2.39e-19 87.8
Msa1233130 AT3G23250.2 57.627 59 25 0 58 116 1 59 2.91e-19 85.9
Msa1233130 AT2G02820.1 42.424 99 56 1 17 115 33 130 3.17e-19 88.6
Msa1233130 AT2G02820.2 42.424 99 56 1 17 115 33 130 4.11e-19 88.6
Msa1233130 AT4G00540.2 35.036 137 82 3 12 145 101 233 1.02e-18 87.0
Msa1233130 AT4G00540.1 35.036 137 82 3 12 145 99 231 1.42e-18 86.7
Msa1233130 AT1G71030.2 53.731 67 31 0 51 117 5 71 2.54e-18 82.0
Msa1233130 AT1G71030.1 53.731 67 31 0 51 117 19 85 3.44e-18 82.0
Msa1233130 AT5G40430.1 37.383 107 63 3 9 114 49 152 8.30e-18 82.4
Msa1233130 AT1G14350.2 42.000 100 55 2 17 115 28 125 8.33e-18 84.3
Msa1233130 AT1G14350.1 42.000 100 55 2 17 115 28 125 8.33e-18 84.3
Msa1233130 AT2G37630.1 38.384 99 59 1 13 109 3 101 1.39e-15 77.4
Msa1233130 AT5G39700.1 35.385 130 69 4 9 127 51 176 4.16e-15 73.2
Msa1233130 AT1G14350.3 48.333 60 31 0 56 115 23 82 2.09e-12 68.2
Msa1233130 AT1G14350.4 48.333 60 31 0 56 115 23 82 2.09e-12 68.2
Msa1233130 AT4G25560.2 59.574 47 19 0 71 117 3 49 6.75e-12 64.7
Msa1233130 AT5G59780.1 58.140 43 18 0 73 115 4 46 8.21e-12 63.5
Msa1233130 AT3G46130.2 58.140 43 18 0 73 115 4 46 1.14e-11 63.5

Find 64 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTTAATACCAGCATATTT+TGG 0.175498 8_2:+9848848 None:intergenic
TAATAGGATTTGTGACAATT+TGG 0.218353 8_2:+9847111 None:intergenic
ACATTAGGGTTTGCATTTAA+AGG 0.239973 8_2:+9847656 None:intergenic
CTTTGATGATTTACTAATTT+AGG 0.241922 8_2:+9847278 None:intergenic
CGCTCGAGCTTCATGTTCTT+GGG 0.252410 8_2:+9847214 None:intergenic
ACAAATCCTATTATTCCTTT+AGG 0.258192 8_2:-9847101 Msa1233130:CDS
TGAAAATTACCTTGCTGATT+TGG 0.271314 8_2:+9847584 None:intergenic
GGAAATTGGCATTATTATAA+TGG 0.286693 8_2:+9847531 None:intergenic
TCGCTCGAGCTTCATGTTCT+TGG 0.291670 8_2:+9847213 None:intergenic
TATCGTTGCATTAATTCAAT+TGG 0.305887 8_2:+9847341 None:intergenic
GATTTGGAGATAAGGTTAAA+TGG 0.309651 8_2:+9847600 None:intergenic
TTTCCATTGAACCAATATTA+TGG 0.312267 8_2:+9847687 None:intergenic
ACCTCATTATCTGTTCTTCC+AGG 0.316676 8_2:+9847803 None:intergenic
GTAGAACTACACAACATTCT+AGG 0.317521 8_2:-9848645 Msa1233130:CDS
TAAGGAGAAGGATTATATAT+TGG 0.323763 8_2:+9847470 None:intergenic
TCCCATCCTAAAGGAATAAT+AGG 0.326865 8_2:+9847095 None:intergenic
AAACTTCCACGTTTCAAATC+AGG 0.335974 8_2:+9848693 None:intergenic
TGAAGTTGAGGAACACATTA+GGG 0.359659 8_2:+9847642 None:intergenic
CATTAGGGTTTGCATTTAAA+GGG 0.370395 8_2:+9847657 None:intergenic
TTGAAGTTGAGGAACACATT+AGG 0.375092 8_2:+9847641 None:intergenic
CTTGGGAATTAGATGAATCT+AGG 0.387566 8_2:+9847231 None:intergenic
ACCTTGCTGATTTGGAGATA+AGG 0.391565 8_2:+9847592 None:intergenic
ATATGATCAATATCATGATT+TGG 0.401830 8_2:-9847321 Msa1233130:CDS
CAACATACGGACATGGTTGT+TGG 0.412593 8_2:-9848880 Msa1233130:CDS
GGTTGATTAATTTGTTAAGT+GGG 0.417536 8_2:+9847363 None:intergenic
AAAAGGTTAAAAGAGGATTA+TGG 0.420293 8_2:-9848940 Msa1233130:CDS
ATCGTTGCATTAATTCAATT+GGG 0.426018 8_2:+9847342 None:intergenic
CTACCATAATATTGGTTCAA+TGG 0.428122 8_2:-9847690 Msa1233130:CDS
ATCCTATTATTCCTTTAGGA+TGG 0.429636 8_2:-9847097 Msa1233130:CDS
TCAGTGCTACAGTACGTCAT+TGG 0.433320 8_2:-9847186 Msa1233130:CDS
ATAAGGTTAAATGGTCTTGA+TGG 0.436192 8_2:+9847609 None:intergenic
GGGTTGATTAATTTGTTAAG+TGG 0.448987 8_2:+9847362 None:intergenic
AATGACCATGTATCTTCATA+AGG 0.463799 8_2:+9847452 None:intergenic
CATTGAACCAATATTATGGT+AGG 0.466526 8_2:+9847691 None:intergenic
ATCAAATATATTACAACATA+CGG 0.468469 8_2:-9848893 Msa1233130:CDS
TCCTATTATTCCTTTAGGAT+GGG 0.476387 8_2:-9847096 Msa1233130:CDS
AATTAAGACTCCCATCCTAA+AGG 0.476871 8_2:+9847086 None:intergenic
ATGGAATATTATCATGAGAA+AGG 0.481156 8_2:+9847744 None:intergenic
GTCATTGGATTACAATATTG+AGG 0.484577 8_2:-9847171 Msa1233130:CDS
TCAGAAAATGTGGTGAAAGA+TGG 0.486096 8_2:+9847725 None:intergenic
TTGAACCAATATTATGGTAG+GGG 0.489116 8_2:+9847693 None:intergenic
AACAAACAAAAGGTTAAAAG+AGG 0.489174 8_2:-9848947 Msa1233130:CDS
CTCTTGTTGCAACAAACAAA+AGG 0.505450 8_2:-9848957 Msa1233130:CDS
GAAAGAGTTGCAGATTAAGA+TGG 0.506273 8_2:-9848731 Msa1233130:CDS
CAGATTGCAAAACACTTACC+TGG 0.507229 8_2:-9847821 Msa1233130:CDS
ATTGAACCAATATTATGGTA+GGG 0.509251 8_2:+9847692 None:intergenic
TACACAACATTCTAGGCAAT+AGG 0.509594 8_2:-9848638 Msa1233130:intron
CTTCTCCTTATGAAGATACA+TGG 0.524776 8_2:-9847457 Msa1233130:CDS
GTTGATTAATTTGTTAAGTG+GGG 0.537055 8_2:+9847364 None:intergenic
AGCTCTGTTCCAAAATATGC+TGG 0.540888 8_2:-9848857 Msa1233130:intron
CTAAGACCTGATTTGAAACG+TGG 0.553388 8_2:-9848699 Msa1233130:CDS
TGTGACAATTTGGCTGCTTG+AGG 0.559773 8_2:+9847121 None:intergenic
GGTGATAATGATTGAAGTTG+AGG 0.568796 8_2:+9847630 None:intergenic
CATGTATCTTCATAAGGAGA+AGG 0.571701 8_2:+9847458 None:intergenic
TAAAAGAGGATTATGGTCAC+CGG 0.589178 8_2:-9848933 Msa1233130:CDS
TGCTAGAAGCATAATCCTCA+AGG 0.592297 8_2:+9847255 None:intergenic
ACAATTTGGCTGCTTGAGGA+TGG 0.594031 8_2:+9847125 None:intergenic
ACCTGGAAGAACAGATAATG+AGG 0.597599 8_2:-9847804 Msa1233130:CDS
ACCTTATCTCCAAATCAGCA+AGG 0.624710 8_2:-9847593 Msa1233130:CDS
AGTAAATCATCAAAGCCTTG+AGG 0.631754 8_2:-9847270 Msa1233130:CDS
GGTGTGAATATCAGAAAATG+TGG 0.643131 8_2:+9847715 None:intergenic
TGAACCAATATTATGGTAGG+GGG 0.649337 8_2:+9847694 None:intergenic
TGTGTAGGTCTGCAAAGATG+TGG 0.651295 8_2:-9848753 Msa1233130:intron
TATATTACAACATACGGACA+TGG 0.689025 8_2:-9848887 Msa1233130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATAAAAATATTTTAAAAT+AGG - chr8_2:9847527-9847546 Msa1233130:CDS 0.0%
!!! ATATAAAAATATTTTAAAAT+AGG - chr8_2:9847527-9847546 Msa1233130:CDS 0.0%
!!! TAGTTTTTTTTTTTTTTAAG+AGG + chr8_2:9847690-9847709 None:intergenic 10.0%
!! AAGTTAAAATACAATAAATA+AGG - chr8_2:9848016-9848035 Msa1233130:intron 10.0%
!!! TAGTTTTTTTTTTTTTTAAG+AGG + chr8_2:9847690-9847709 None:intergenic 10.0%
!! AAGTTAAAATACAATAAATA+AGG - chr8_2:9848016-9848035 Msa1233130:intron 10.0%
!! ATCAAATATATTACAACATA+CGG - chr8_2:9847163-9847182 Msa1233130:CDS 15.0%
!! AAAAAAATGTTATACTATAC+TGG + chr8_2:9847567-9847586 None:intergenic 15.0%
!! TGCAAAAAATAATAAATTAG+AGG + chr8_2:9847604-9847623 None:intergenic 15.0%
!!! TTTTTTTTTTTTTAAGAGGA+CGG + chr8_2:9847686-9847705 None:intergenic 15.0%
!!! TTAATGATAAGATAAGTTTT+AGG - chr8_2:9847786-9847805 Msa1233130:CDS 15.0%
!!! TAATGATAAGATAAGTTTTA+GGG - chr8_2:9847787-9847806 Msa1233130:CDS 15.0%
!!! TTAAAGTGAAATCTTTATTT+TGG + chr8_2:9847935-9847954 None:intergenic 15.0%
!! ATCAAATATATTACAACATA+CGG - chr8_2:9847163-9847182 Msa1233130:CDS 15.0%
!! AAAAAAATGTTATACTATAC+TGG + chr8_2:9847567-9847586 None:intergenic 15.0%
!! TGCAAAAAATAATAAATTAG+AGG + chr8_2:9847604-9847623 None:intergenic 15.0%
!!! TTTTTTTTTTTTTAAGAGGA+CGG + chr8_2:9847686-9847705 None:intergenic 15.0%
!!! TTAATGATAAGATAAGTTTT+AGG - chr8_2:9847786-9847805 Msa1233130:CDS 15.0%
!!! TAATGATAAGATAAGTTTTA+GGG - chr8_2:9847787-9847806 Msa1233130:CDS 15.0%
!!! TTAAAGTGAAATCTTTATTT+TGG + chr8_2:9847935-9847954 None:intergenic 15.0%
!!! ATAAGAATTTACACTTGTTT+TGG - chr8_2:9848201-9848220 Msa1233130:intron 20.0%
!!! AATTGATTTTCTTGATTTAC+TGG + chr8_2:9848655-9848674 None:intergenic 20.0%
!! ATATGATCAATATCATGATT+TGG - chr8_2:9848735-9848754 Msa1233130:CDS 20.0%
!!! CTTTGATGATTTACTAATTT+AGG + chr8_2:9848781-9848800 None:intergenic 20.0%
!!! ATAAGAATTTACACTTGTTT+TGG - chr8_2:9848201-9848220 Msa1233130:intron 20.0%
!!! AATTGATTTTCTTGATTTAC+TGG + chr8_2:9848655-9848674 None:intergenic 20.0%
!! ATATGATCAATATCATGATT+TGG - chr8_2:9848735-9848754 Msa1233130:CDS 20.0%
!!! CTTTGATGATTTACTAATTT+AGG + chr8_2:9848781-9848800 None:intergenic 20.0%
! AACAAACAAAAGGTTAAAAG+AGG - chr8_2:9847109-9847128 Msa1233130:CDS 25.0%
! AAAAGGTTAAAAGAGGATTA+TGG - chr8_2:9847116-9847135 Msa1233130:CDS 25.0%
!! TGTTTAATACCAGCATATTT+TGG + chr8_2:9847211-9847230 None:intergenic 25.0%
! TCAAAATTCAAAAGTTTGTC+TGG - chr8_2:9847478-9847497 Msa1233130:CDS 25.0%
! ATATGTTAAATCGACATTCA+GGG + chr8_2:9847511-9847530 None:intergenic 25.0%
! TATATGTTAAATCGACATTC+AGG + chr8_2:9847512-9847531 None:intergenic 25.0%
! AAATATTTCCCTATACATCT+AGG - chr8_2:9847640-9847659 Msa1233130:CDS 25.0%
! AATATTTCCCTATACATCTA+GGG - chr8_2:9847641-9847660 Msa1233130:CDS 25.0%
! AAAAATATTGCAAAGCGAAA+GGG - chr8_2:9848099-9848118 Msa1233130:intron 25.0%
!! ATAATGAGGTGAAAAACTTT+TGG - chr8_2:9848266-9848285 Msa1233130:intron 25.0%
!! AGAAAGGATTTTCTTCTTTA+TGG + chr8_2:9848299-9848318 None:intergenic 25.0%
! ATGGAATATTATCATGAGAA+AGG + chr8_2:9848315-9848334 None:intergenic 25.0%
! ATTGAACCAATATTATGGTA+GGG + chr8_2:9848367-9848386 None:intergenic 25.0%
! TTTCCATTGAACCAATATTA+TGG + chr8_2:9848372-9848391 None:intergenic 25.0%
! GGAAATTGGCATTATTATAA+TGG + chr8_2:9848528-9848547 None:intergenic 25.0%
!! ATTTTGAATGTGAAGGAAAT+TGG + chr8_2:9848542-9848561 None:intergenic 25.0%
!! TGTACAATATTTTGTGGTAT+TGG + chr8_2:9848565-9848584 None:intergenic 25.0%
!! ATTGGTTGTACAATATTTTG+TGG + chr8_2:9848571-9848590 None:intergenic 25.0%
! TAAGGAGAAGGATTATATAT+TGG + chr8_2:9848589-9848608 None:intergenic 25.0%
!!! GTTGATTAATTTGTTAAGTG+GGG + chr8_2:9848695-9848714 None:intergenic 25.0%
!!! GGTTGATTAATTTGTTAAGT+GGG + chr8_2:9848696-9848715 None:intergenic 25.0%
! ATCGTTGCATTAATTCAATT+GGG + chr8_2:9848717-9848736 None:intergenic 25.0%
! TATCGTTGCATTAATTCAAT+TGG + chr8_2:9848718-9848737 None:intergenic 25.0%
! TAATAGGATTTGTGACAATT+TGG + chr8_2:9848948-9848967 None:intergenic 25.0%
! ACAAATCCTATTATTCCTTT+AGG - chr8_2:9848955-9848974 Msa1233130:CDS 25.0%
! AACAAACAAAAGGTTAAAAG+AGG - chr8_2:9847109-9847128 Msa1233130:CDS 25.0%
! AAAAGGTTAAAAGAGGATTA+TGG - chr8_2:9847116-9847135 Msa1233130:CDS 25.0%
!! TGTTTAATACCAGCATATTT+TGG + chr8_2:9847211-9847230 None:intergenic 25.0%
! TCAAAATTCAAAAGTTTGTC+TGG - chr8_2:9847478-9847497 Msa1233130:CDS 25.0%
! ATATGTTAAATCGACATTCA+GGG + chr8_2:9847511-9847530 None:intergenic 25.0%
! TATATGTTAAATCGACATTC+AGG + chr8_2:9847512-9847531 None:intergenic 25.0%
! AAATATTTCCCTATACATCT+AGG - chr8_2:9847640-9847659 Msa1233130:CDS 25.0%
! AATATTTCCCTATACATCTA+GGG - chr8_2:9847641-9847660 Msa1233130:CDS 25.0%
! AAAAATATTGCAAAGCGAAA+GGG - chr8_2:9848099-9848118 Msa1233130:intron 25.0%
!! ATAATGAGGTGAAAAACTTT+TGG - chr8_2:9848266-9848285 Msa1233130:intron 25.0%
!! AGAAAGGATTTTCTTCTTTA+TGG + chr8_2:9848299-9848318 None:intergenic 25.0%
! ATGGAATATTATCATGAGAA+AGG + chr8_2:9848315-9848334 None:intergenic 25.0%
! ATTGAACCAATATTATGGTA+GGG + chr8_2:9848367-9848386 None:intergenic 25.0%
! TTTCCATTGAACCAATATTA+TGG + chr8_2:9848372-9848391 None:intergenic 25.0%
! GGAAATTGGCATTATTATAA+TGG + chr8_2:9848528-9848547 None:intergenic 25.0%
!! ATTTTGAATGTGAAGGAAAT+TGG + chr8_2:9848542-9848561 None:intergenic 25.0%
!! TGTACAATATTTTGTGGTAT+TGG + chr8_2:9848565-9848584 None:intergenic 25.0%
!! ATTGGTTGTACAATATTTTG+TGG + chr8_2:9848571-9848590 None:intergenic 25.0%
! TAAGGAGAAGGATTATATAT+TGG + chr8_2:9848589-9848608 None:intergenic 25.0%
!!! GTTGATTAATTTGTTAAGTG+GGG + chr8_2:9848695-9848714 None:intergenic 25.0%
!!! GGTTGATTAATTTGTTAAGT+GGG + chr8_2:9848696-9848715 None:intergenic 25.0%
! ATCGTTGCATTAATTCAATT+GGG + chr8_2:9848717-9848736 None:intergenic 25.0%
! TATCGTTGCATTAATTCAAT+TGG + chr8_2:9848718-9848737 None:intergenic 25.0%
! TAATAGGATTTGTGACAATT+TGG + chr8_2:9848948-9848967 None:intergenic 25.0%
! ACAAATCCTATTATTCCTTT+AGG - chr8_2:9848955-9848974 Msa1233130:CDS 25.0%
! ATGAGTTTTTCATCTTCTTC+CGG + chr8_2:9847145-9847164 None:intergenic 30.0%
TATATTACAACATACGGACA+TGG - chr8_2:9847169-9847188 Msa1233130:CDS 30.0%
TTGTATATCATGATGTGTGT+AGG - chr8_2:9847288-9847307 Msa1233130:CDS 30.0%
TTATTAGCCCTAGATGTATA+GGG + chr8_2:9847651-9847670 None:intergenic 30.0%
TGATGCTAACAAATGTTCTA+GGG - chr8_2:9847810-9847829 Msa1233130:CDS 30.0%
AAGTAGTTAGAAGAATAGCT+AGG - chr8_2:9847992-9848011 Msa1233130:intron 30.0%
CAAAAATATTGCAAAGCGAA+AGG - chr8_2:9848098-9848117 Msa1233130:intron 30.0%
TTGAACCAATATTATGGTAG+GGG + chr8_2:9848366-9848385 None:intergenic 30.0%
CATTGAACCAATATTATGGT+AGG + chr8_2:9848368-9848387 None:intergenic 30.0%
!! CTACCATAATATTGGTTCAA+TGG - chr8_2:9848366-9848385 Msa1233130:intron 30.0%
CATTAGGGTTTGCATTTAAA+GGG + chr8_2:9848402-9848421 None:intergenic 30.0%
ACATTAGGGTTTGCATTTAA+AGG + chr8_2:9848403-9848422 None:intergenic 30.0%
! ATAAGGTTAAATGGTCTTGA+TGG + chr8_2:9848450-9848469 None:intergenic 30.0%
GATTTGGAGATAAGGTTAAA+TGG + chr8_2:9848459-9848478 None:intergenic 30.0%
! TGAAAATTACCTTGCTGATT+TGG + chr8_2:9848475-9848494 None:intergenic 30.0%
! GTATTGGATTTTGAATGTGA+AGG + chr8_2:9848549-9848568 None:intergenic 30.0%
AATGACCATGTATCTTCATA+AGG + chr8_2:9848607-9848626 None:intergenic 30.0%
!! GGGTTGATTAATTTGTTAAG+TGG + chr8_2:9848697-9848716 None:intergenic 30.0%
GTCATTGGATTACAATATTG+AGG - chr8_2:9848885-9848904 Msa1233130:CDS 30.0%
! ATCCTATTATTCCTTTAGGA+TGG - chr8_2:9848959-9848978 Msa1233130:CDS 30.0%
!! TCCTATTATTCCTTTAGGAT+GGG - chr8_2:9848960-9848979 Msa1233130:CDS 30.0%
! ATGAGTTTTTCATCTTCTTC+CGG + chr8_2:9847145-9847164 None:intergenic 30.0%
TATATTACAACATACGGACA+TGG - chr8_2:9847169-9847188 Msa1233130:CDS 30.0%
TTGTATATCATGATGTGTGT+AGG - chr8_2:9847288-9847307 Msa1233130:CDS 30.0%
TTATTAGCCCTAGATGTATA+GGG + chr8_2:9847651-9847670 None:intergenic 30.0%
TGATGCTAACAAATGTTCTA+GGG - chr8_2:9847810-9847829 Msa1233130:CDS 30.0%
AAGTAGTTAGAAGAATAGCT+AGG - chr8_2:9847992-9848011 Msa1233130:intron 30.0%
CAAAAATATTGCAAAGCGAA+AGG - chr8_2:9848098-9848117 Msa1233130:intron 30.0%
TTGAACCAATATTATGGTAG+GGG + chr8_2:9848366-9848385 None:intergenic 30.0%
CATTGAACCAATATTATGGT+AGG + chr8_2:9848368-9848387 None:intergenic 30.0%
!! CTACCATAATATTGGTTCAA+TGG - chr8_2:9848366-9848385 Msa1233130:intron 30.0%
CATTAGGGTTTGCATTTAAA+GGG + chr8_2:9848402-9848421 None:intergenic 30.0%
ACATTAGGGTTTGCATTTAA+AGG + chr8_2:9848403-9848422 None:intergenic 30.0%
! ATAAGGTTAAATGGTCTTGA+TGG + chr8_2:9848450-9848469 None:intergenic 30.0%
GATTTGGAGATAAGGTTAAA+TGG + chr8_2:9848459-9848478 None:intergenic 30.0%
! TGAAAATTACCTTGCTGATT+TGG + chr8_2:9848475-9848494 None:intergenic 30.0%
! GTATTGGATTTTGAATGTGA+AGG + chr8_2:9848549-9848568 None:intergenic 30.0%
AATGACCATGTATCTTCATA+AGG + chr8_2:9848607-9848626 None:intergenic 30.0%
!! GGGTTGATTAATTTGTTAAG+TGG + chr8_2:9848697-9848716 None:intergenic 30.0%
GTCATTGGATTACAATATTG+AGG - chr8_2:9848885-9848904 Msa1233130:CDS 30.0%
! ATCCTATTATTCCTTTAGGA+TGG - chr8_2:9848959-9848978 Msa1233130:CDS 30.0%
!! TCCTATTATTCCTTTAGGAT+GGG - chr8_2:9848960-9848979 Msa1233130:CDS 30.0%
CTCTTGTTGCAACAAACAAA+AGG - chr8_2:9847099-9847118 Msa1233130:CDS 35.0%
TAAAAGAGGATTATGGTCAC+CGG - chr8_2:9847123-9847142 Msa1233130:CDS 35.0%
GAAAGAGTTGCAGATTAAGA+TGG - chr8_2:9847325-9847344 Msa1233130:CDS 35.0%
AAACTTCCACGTTTCAAATC+AGG + chr8_2:9847366-9847385 None:intergenic 35.0%
GTAGAACTACACAACATTCT+AGG - chr8_2:9847411-9847430 Msa1233130:CDS 35.0%
TACACAACATTCTAGGCAAT+AGG - chr8_2:9847418-9847437 Msa1233130:CDS 35.0%
GTTATTAGCCCTAGATGTAT+AGG + chr8_2:9847652-9847671 None:intergenic 35.0%
ATTCCTAAAATGAGACTCGA+TGG + chr8_2:9847718-9847737 None:intergenic 35.0%
GTGATGCTAACAAATGTTCT+AGG - chr8_2:9847809-9847828 Msa1233130:CDS 35.0%
GATGCTAACAAATGTTCTAG+GGG - chr8_2:9847811-9847830 Msa1233130:CDS 35.0%
!!! TTACACTTGTTTTGGACAGA+TGG - chr8_2:9848209-9848228 Msa1233130:intron 35.0%
!!! TACACTTGTTTTGGACAGAT+GGG - chr8_2:9848210-9848229 Msa1233130:intron 35.0%
TCAGAAAATGTGGTGAAAGA+TGG + chr8_2:9848334-9848353 None:intergenic 35.0%
GGTGTGAATATCAGAAAATG+TGG + chr8_2:9848344-9848363 None:intergenic 35.0%
TGAACCAATATTATGGTAGG+GGG + chr8_2:9848365-9848384 None:intergenic 35.0%
TGAAGTTGAGGAACACATTA+GGG + chr8_2:9848417-9848436 None:intergenic 35.0%
TTGAAGTTGAGGAACACATT+AGG + chr8_2:9848418-9848437 None:intergenic 35.0%
! GGTGATAATGATTGAAGTTG+AGG + chr8_2:9848429-9848448 None:intergenic 35.0%
CATGTATCTTCATAAGGAGA+AGG + chr8_2:9848601-9848620 None:intergenic 35.0%
CTTCTCCTTATGAAGATACA+TGG - chr8_2:9848599-9848618 Msa1233130:intron 35.0%
AGTAAATCATCAAAGCCTTG+AGG - chr8_2:9848786-9848805 Msa1233130:intron 35.0%
CTTGGGAATTAGATGAATCT+AGG + chr8_2:9848828-9848847 None:intergenic 35.0%
TCCCATCCTAAAGGAATAAT+AGG + chr8_2:9848964-9848983 None:intergenic 35.0%
CTCTTGTTGCAACAAACAAA+AGG - chr8_2:9847099-9847118 Msa1233130:CDS 35.0%
TAAAAGAGGATTATGGTCAC+CGG - chr8_2:9847123-9847142 Msa1233130:CDS 35.0%
GAAAGAGTTGCAGATTAAGA+TGG - chr8_2:9847325-9847344 Msa1233130:CDS 35.0%
AAACTTCCACGTTTCAAATC+AGG + chr8_2:9847366-9847385 None:intergenic 35.0%
GTAGAACTACACAACATTCT+AGG - chr8_2:9847411-9847430 Msa1233130:CDS 35.0%
TACACAACATTCTAGGCAAT+AGG - chr8_2:9847418-9847437 Msa1233130:CDS 35.0%
GTTATTAGCCCTAGATGTAT+AGG + chr8_2:9847652-9847671 None:intergenic 35.0%
ATTCCTAAAATGAGACTCGA+TGG + chr8_2:9847718-9847737 None:intergenic 35.0%
GTGATGCTAACAAATGTTCT+AGG - chr8_2:9847809-9847828 Msa1233130:CDS 35.0%
GATGCTAACAAATGTTCTAG+GGG - chr8_2:9847811-9847830 Msa1233130:CDS 35.0%
!!! TTACACTTGTTTTGGACAGA+TGG - chr8_2:9848209-9848228 Msa1233130:intron 35.0%
!!! TACACTTGTTTTGGACAGAT+GGG - chr8_2:9848210-9848229 Msa1233130:intron 35.0%
TCAGAAAATGTGGTGAAAGA+TGG + chr8_2:9848334-9848353 None:intergenic 35.0%
GGTGTGAATATCAGAAAATG+TGG + chr8_2:9848344-9848363 None:intergenic 35.0%
TGAACCAATATTATGGTAGG+GGG + chr8_2:9848365-9848384 None:intergenic 35.0%
TGAAGTTGAGGAACACATTA+GGG + chr8_2:9848417-9848436 None:intergenic 35.0%
TTGAAGTTGAGGAACACATT+AGG + chr8_2:9848418-9848437 None:intergenic 35.0%
! GGTGATAATGATTGAAGTTG+AGG + chr8_2:9848429-9848448 None:intergenic 35.0%
CATGTATCTTCATAAGGAGA+AGG + chr8_2:9848601-9848620 None:intergenic 35.0%
CTTCTCCTTATGAAGATACA+TGG - chr8_2:9848599-9848618 Msa1233130:intron 35.0%
AGTAAATCATCAAAGCCTTG+AGG - chr8_2:9848786-9848805 Msa1233130:intron 35.0%
CTTGGGAATTAGATGAATCT+AGG + chr8_2:9848828-9848847 None:intergenic 35.0%
TCCCATCCTAAAGGAATAAT+AGG + chr8_2:9848964-9848983 None:intergenic 35.0%
AGCTCTGTTCCAAAATATGC+TGG - chr8_2:9847199-9847218 Msa1233130:CDS 40.0%
! CTAAGACCTGATTTGAAACG+TGG - chr8_2:9847357-9847376 Msa1233130:CDS 40.0%
GTTAAATCGACATTCAGGGA+GGG + chr8_2:9847507-9847526 None:intergenic 40.0%
TGTTAAATCGACATTCAGGG+AGG + chr8_2:9847508-9847527 None:intergenic 40.0%
! ACTCCATCGAGTCTCATTTT+AGG - chr8_2:9847712-9847731 Msa1233130:CDS 40.0%
CAGATTGCAAAACACTTACC+TGG - chr8_2:9848235-9848254 Msa1233130:intron 40.0%
ACCTGGAAGAACAGATAATG+AGG - chr8_2:9848252-9848271 Msa1233130:intron 40.0%
ACCTCATTATCTGTTCTTCC+AGG + chr8_2:9848256-9848275 None:intergenic 40.0%
ACCTTATCTCCAAATCAGCA+AGG - chr8_2:9848463-9848482 Msa1233130:intron 40.0%
!! ACCTTGCTGATTTGGAGATA+AGG + chr8_2:9848467-9848486 None:intergenic 40.0%
! TGCTAGAAGCATAATCCTCA+AGG + chr8_2:9848804-9848823 None:intergenic 40.0%
AGCTCTGTTCCAAAATATGC+TGG - chr8_2:9847199-9847218 Msa1233130:CDS 40.0%
! CTAAGACCTGATTTGAAACG+TGG - chr8_2:9847357-9847376 Msa1233130:CDS 40.0%
GTTAAATCGACATTCAGGGA+GGG + chr8_2:9847507-9847526 None:intergenic 40.0%
TGTTAAATCGACATTCAGGG+AGG + chr8_2:9847508-9847527 None:intergenic 40.0%
! ACTCCATCGAGTCTCATTTT+AGG - chr8_2:9847712-9847731 Msa1233130:CDS 40.0%
CAGATTGCAAAACACTTACC+TGG - chr8_2:9848235-9848254 Msa1233130:intron 40.0%
ACCTGGAAGAACAGATAATG+AGG - chr8_2:9848252-9848271 Msa1233130:intron 40.0%
ACCTCATTATCTGTTCTTCC+AGG + chr8_2:9848256-9848275 None:intergenic 40.0%
ACCTTATCTCCAAATCAGCA+AGG - chr8_2:9848463-9848482 Msa1233130:intron 40.0%
!! ACCTTGCTGATTTGGAGATA+AGG + chr8_2:9848467-9848486 None:intergenic 40.0%
! TGCTAGAAGCATAATCCTCA+AGG + chr8_2:9848804-9848823 None:intergenic 40.0%
CAACATACGGACATGGTTGT+TGG - chr8_2:9847176-9847195 Msa1233130:CDS 45.0%
TGTGTAGGTCTGCAAAGATG+TGG - chr8_2:9847303-9847322 Msa1233130:CDS 45.0%
!! ACAAATGTTCTAGGGGCATC+AGG - chr8_2:9847818-9847837 Msa1233130:CDS 45.0%
!! CAAATGTTCTAGGGGCATCA+GGG - chr8_2:9847819-9847838 Msa1233130:CDS 45.0%
CACACCCCCTACCATAATAT+TGG - chr8_2:9848358-9848377 Msa1233130:intron 45.0%
TCAGTGCTACAGTACGTCAT+TGG - chr8_2:9848870-9848889 Msa1233130:CDS 45.0%
ACAATTTGGCTGCTTGAGGA+TGG + chr8_2:9848934-9848953 None:intergenic 45.0%
TGTGACAATTTGGCTGCTTG+AGG + chr8_2:9848938-9848957 None:intergenic 45.0%
CAACATACGGACATGGTTGT+TGG - chr8_2:9847176-9847195 Msa1233130:CDS 45.0%
TGTGTAGGTCTGCAAAGATG+TGG - chr8_2:9847303-9847322 Msa1233130:CDS 45.0%
!! ACAAATGTTCTAGGGGCATC+AGG - chr8_2:9847818-9847837 Msa1233130:CDS 45.0%
!! CAAATGTTCTAGGGGCATCA+GGG - chr8_2:9847819-9847838 Msa1233130:CDS 45.0%
CACACCCCCTACCATAATAT+TGG - chr8_2:9848358-9848377 Msa1233130:intron 45.0%
TCAGTGCTACAGTACGTCAT+TGG - chr8_2:9848870-9848889 Msa1233130:CDS 45.0%
ACAATTTGGCTGCTTGAGGA+TGG + chr8_2:9848934-9848953 None:intergenic 45.0%
TGTGACAATTTGGCTGCTTG+AGG + chr8_2:9848938-9848957 None:intergenic 45.0%
CGCTCGAGCTTCATGTTCTT+GGG + chr8_2:9848845-9848864 None:intergenic 50.0%
TCGCTCGAGCTTCATGTTCT+TGG + chr8_2:9848846-9848865 None:intergenic 50.0%
CGCTCGAGCTTCATGTTCTT+GGG + chr8_2:9848845-9848864 None:intergenic 50.0%
TCGCTCGAGCTTCATGTTCT+TGG + chr8_2:9848846-9848865 None:intergenic 50.0%
! GGGCATCAGGGCACTTGTTA+AGG - chr8_2:9847831-9847850 Msa1233130:CDS 55.0%
! GGGCATCAGGGCACTTGTTA+AGG - chr8_2:9847831-9847850 Msa1233130:CDS 55.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 9847088 9848990 9847088 ID=Msa1233130;Name=Msa1233130
chr8_2 mRNA 9847088 9848990 9847088 ID=Msa1233130-mRNA-1;Parent=Msa1233130;Name=Msa1233130-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|1|1|1|3|0|341
chr8_2 exon 9848858 9848990 9848858 ID=Msa1233130-mRNA-1:exon:3883;Parent=Msa1233130-mRNA-1
chr8_2 exon 9848639 9848768 9848639 ID=Msa1233130-mRNA-1:exon:3882;Parent=Msa1233130-mRNA-1
chr8_2 exon 9847088 9847850 9847088 ID=Msa1233130-mRNA-1:exon:3881;Parent=Msa1233130-mRNA-1
chr8_2 CDS 9848858 9848990 9848858 ID=Msa1233130-mRNA-1:cds;Parent=Msa1233130-mRNA-1
chr8_2 CDS 9848639 9848768 9848639 ID=Msa1233130-mRNA-1:cds;Parent=Msa1233130-mRNA-1
chr8_2 CDS 9847088 9847850 9847088 ID=Msa1233130-mRNA-1:cds;Parent=Msa1233130-mRNA-1
Gene Sequence

>Msa1233130

ATGGGACATCACTCTTGTTGCAACAAACAAAAGGTTAAAAGAGGATTATGGTCACCGGAAGAAGATGAAAAACTCATCAAATATATTACAACATACGGACATGGTTGTTGGAGCTCTGTTCCAAAATATGCTGGTCTGCAAAGATGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATCTAAGACCTGATTTGAAACGTGGAAGTTTCTCTCATCAAGAAGCAGTACTCATTGTAGAACTACACAACATTCTAGGCAATAGATGGGCTCAGATTGCAAAACACTTACCTGGAAGAACAGATAATGAGGTGAAAAACTTTTGGAATTCAACCATAAAGAAGAAAATCCTTTCTCATGATAATATTCCATCTTTCACCACATTTTCTGATATTCACACCCCCTACCATAATATTGGTTCAATGGAAAACTTCTTCCCTTTAAATGCAAACCCTAATGTGTTCCTCAACTTCAATCATTATCACCATCAAGACCATTTAACCTTATCTCCAAATCAGCAAGGTAATTTTCATCAAGTTGATACAAATGTAGACATCAAAGACCATTATAATAATGCCAATTTCCTTCACATTCAAAATCCAATACCACAAAATATTGTACAACCAATATATAATCCTTCTCCTTATGAAGATACATGGTCATTAGACAGTGTAGCTCTTCATCTCAATCCAGTAAATCAAGAAAATCAATTTTCGAAAATTGACACGACCCCACTTAACAAATTAATCAACCCAATTGAATTAATGCAACGATATGATCAATATCATGATTTGGTCGAACTTGATGCTACTGTGCCTAAATTAGTAAATCATCAAAGCCTTGAGGATTATGCTTCTAGCATCCTAGATTCATCTAATTCCCAAGAACATGAAGCTCGAGCGACAATTCAGTGCTACAGTACGTCATTGGATTACAATATTGAGGCTCTCATGTGTATGTCATCATTGCCATCCTCAAGCAGCCAAATTGTCACAAATCCTATTATTCCTTTAGGATGGGAGTCTTAA
Protein sequence

>Msa1233130

MGHHSCCNKQKVKRGLWSPEEDEKLIKYITTYGHGCWSSVPKYAGLQRCGKSCRLRWINYLRPDLKRGSFSHQEAVLIVELHNILGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKILSHDNIPSFTTFSDIHTPYHNIGSMENFFPLNANPNVFLNFNHYHHQDHLTLSPNQQGNFHQVDTNVDIKDHYNNANFLHIQNPIPQNIVQPIYNPSPYEDTWSLDSVALHLNPVNQENQFSKIDTTPLNKLINPIELMQRYDQYHDLVELDATVPKLVNHQSLEDYASSILDSSNSQEHEARATIQCYSTSLDYNIEALMCMSSLPSSSSQIVTNPIIPLGWES*